data_8ZMV # _entry.id 8ZMV # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.395 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 8ZMV pdb_00008zmv 10.2210/pdb8zmv/pdb WWPDB D_1300048151 ? ? # _pdbx_audit_revision_history.ordinal 1 _pdbx_audit_revision_history.data_content_type 'Structure model' _pdbx_audit_revision_history.major_revision 1 _pdbx_audit_revision_history.minor_revision 0 _pdbx_audit_revision_history.revision_date 2024-07-31 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 8ZMV _pdbx_database_status.recvd_initial_deposition_date 2024-05-24 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # _pdbx_contact_author.id 2 _pdbx_contact_author.email zhaiyuanxin@trautec.com.cn _pdbx_contact_author.name_first Yun _pdbx_contact_author.name_last Chu _pdbx_contact_author.name_mi ? _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0002-1497-3781 # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Chu, Y.' 1 ? 'Zhai, Y.' 2 ? 'Fan, X.' 3 ? 'Fu, S.' 4 ? 'Li, J.' 5 ? 'Wu, X.' 6 ? 'Cai, H.' 7 ? 'Wang, X.' 8 ? 'Li, D.' 9 ? 'Feng, P.' 10 ? 'Cao, K.' 11 ? 'Qian, S.' 12 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country ? _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'To Be Published' _citation.journal_id_ASTM ? _citation.journal_id_CSD 0353 _citation.journal_id_ISSN ? _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume ? _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title 'Structure of a triple-helix region of human Collagen type XVII from Trautec' _citation.year ? _citation.database_id_CSD ? _citation.pdbx_database_id_DOI ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Chu, Y.' 1 ? primary 'Zhai, Y.' 2 ? primary 'Fan, X.' 3 ? primary 'Fu, S.' 4 ? primary 'Li, J.' 5 ? primary 'Wu, X.' 6 ? primary 'Cai, H.' 7 ? primary 'Wang, X.' 8 ? primary 'Li, D.' 9 ? primary 'Feng, P.' 10 ? primary 'Cao, K.' 11 ? primary 'Qian, S.' 12 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn 'collagen type XVII' 2757.918 3 ? ? ? ? 2 water nat water 18.015 61 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code 'P(HYP)GP(HYP)GP(HYP)GPQGPKGDKGDPGP(HYP)GP(HYP)GP(HYP)G' _entity_poly.pdbx_seq_one_letter_code_can PPGPPGPPGPQGPKGDKGDPGPPGPPGPPG _entity_poly.pdbx_strand_id A,B,C _entity_poly.pdbx_target_identifier ? # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 PRO n 1 2 HYP n 1 3 GLY n 1 4 PRO n 1 5 HYP n 1 6 GLY n 1 7 PRO n 1 8 HYP n 1 9 GLY n 1 10 PRO n 1 11 GLN n 1 12 GLY n 1 13 PRO n 1 14 LYS n 1 15 GLY n 1 16 ASP n 1 17 LYS n 1 18 GLY n 1 19 ASP n 1 20 PRO n 1 21 GLY n 1 22 PRO n 1 23 HYP n 1 24 GLY n 1 25 PRO n 1 26 HYP n 1 27 GLY n 1 28 PRO n 1 29 HYP n 1 30 GLY n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 30 _pdbx_entity_src_syn.organism_scientific 'Homo sapiens' _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 9606 _pdbx_entity_src_syn.details ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HOH non-polymer . WATER ? 'H2 O' 18.015 HYP 'L-peptide linking' n 4-HYDROXYPROLINE HYDROXYPROLINE 'C5 H9 N O3' 131.130 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 PRO 1 1 ? ? ? A . n A 1 2 HYP 2 2 2 HYP HYP A . n A 1 3 GLY 3 3 3 GLY GLY A . n A 1 4 PRO 4 4 4 PRO PRO A . n A 1 5 HYP 5 5 5 HYP HYP A . n A 1 6 GLY 6 6 6 GLY GLY A . n A 1 7 PRO 7 7 7 PRO PRO A . n A 1 8 HYP 8 8 8 HYP HYP A . n A 1 9 GLY 9 9 9 GLY GLY A . n A 1 10 PRO 10 10 10 PRO PRO A . n A 1 11 GLN 11 11 11 GLN GLN A . n A 1 12 GLY 12 12 12 GLY GLY A . n A 1 13 PRO 13 13 13 PRO PRO A . n A 1 14 LYS 14 14 14 LYS LYS A . n A 1 15 GLY 15 15 15 GLY GLY A . n A 1 16 ASP 16 16 16 ASP ASP A . n A 1 17 LYS 17 17 17 LYS LYS A . n A 1 18 GLY 18 18 18 GLY GLY A . n A 1 19 ASP 19 19 19 ASP ASP A . n A 1 20 PRO 20 20 20 PRO PRO A . n A 1 21 GLY 21 21 21 GLY GLY A . n A 1 22 PRO 22 22 22 PRO PRO A . n A 1 23 HYP 23 23 23 HYP HYP A . n A 1 24 GLY 24 24 24 GLY GLY A . n A 1 25 PRO 25 25 25 PRO PRO A . n A 1 26 HYP 26 26 26 HYP HYP A . n A 1 27 GLY 27 27 27 GLY GLY A . n A 1 28 PRO 28 28 28 PRO PRO A . n A 1 29 HYP 29 29 29 HYP HYP A . n A 1 30 GLY 30 30 ? ? ? A . n B 1 1 PRO 1 1 1 PRO PRO B . n B 1 2 HYP 2 2 2 HYP HYP B . n B 1 3 GLY 3 3 3 GLY GLY B . n B 1 4 PRO 4 4 4 PRO PRO B . n B 1 5 HYP 5 5 5 HYP HYP B . n B 1 6 GLY 6 6 6 GLY GLY B . n B 1 7 PRO 7 7 7 PRO PRO B . n B 1 8 HYP 8 8 8 HYP HYP B . n B 1 9 GLY 9 9 9 GLY GLY B . n B 1 10 PRO 10 10 10 PRO PRO B . n B 1 11 GLN 11 11 11 GLN GLN B . n B 1 12 GLY 12 12 12 GLY GLY B . n B 1 13 PRO 13 13 13 PRO PRO B . n B 1 14 LYS 14 14 14 LYS LYS B . n B 1 15 GLY 15 15 15 GLY GLY B . n B 1 16 ASP 16 16 16 ASP ASP B . n B 1 17 LYS 17 17 17 LYS LYS B . n B 1 18 GLY 18 18 18 GLY GLY B . n B 1 19 ASP 19 19 19 ASP ASP B . n B 1 20 PRO 20 20 20 PRO PRO B . n B 1 21 GLY 21 21 21 GLY GLY B . n B 1 22 PRO 22 22 22 PRO PRO B . n B 1 23 HYP 23 23 23 HYP HYP B . n B 1 24 GLY 24 24 24 GLY GLY B . n B 1 25 PRO 25 25 25 PRO PRO B . n B 1 26 HYP 26 26 26 HYP HYP B . n B 1 27 GLY 27 27 27 GLY GLY B . n B 1 28 PRO 28 28 28 PRO PRO B . n B 1 29 HYP 29 29 29 HYP HYP B . n B 1 30 GLY 30 30 30 GLY GLY B . n C 1 1 PRO 1 1 ? ? ? C . n C 1 2 HYP 2 2 ? ? ? C . n C 1 3 GLY 3 3 ? ? ? C . n C 1 4 PRO 4 4 4 PRO PRO C . n C 1 5 HYP 5 5 5 HYP HYP C . n C 1 6 GLY 6 6 6 GLY GLY C . n C 1 7 PRO 7 7 7 PRO PRO C . n C 1 8 HYP 8 8 8 HYP HYP C . n C 1 9 GLY 9 9 9 GLY GLY C . n C 1 10 PRO 10 10 10 PRO PRO C . n C 1 11 GLN 11 11 11 GLN GLN C . n C 1 12 GLY 12 12 12 GLY GLY C . n C 1 13 PRO 13 13 13 PRO PRO C . n C 1 14 LYS 14 14 14 LYS LYS C . n C 1 15 GLY 15 15 15 GLY GLY C . n C 1 16 ASP 16 16 16 ASP ASP C . n C 1 17 LYS 17 17 17 LYS LYS C . n C 1 18 GLY 18 18 18 GLY GLY C . n C 1 19 ASP 19 19 19 ASP ASP C . n C 1 20 PRO 20 20 20 PRO PRO C . n C 1 21 GLY 21 21 21 GLY GLY C . n C 1 22 PRO 22 22 22 PRO PRO C . n C 1 23 HYP 23 23 23 HYP HYP C . n C 1 24 GLY 24 24 24 GLY GLY C . n C 1 25 PRO 25 25 25 PRO PRO C . n C 1 26 HYP 26 26 26 HYP HYP C . n C 1 27 GLY 27 27 27 GLY GLY C . n C 1 28 PRO 28 28 28 PRO PRO C . n C 1 29 HYP 29 29 29 HYP HYP C . n C 1 30 GLY 30 30 ? ? ? C . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code D 2 HOH 1 101 25 HOH HOH A . D 2 HOH 2 102 57 HOH HOH A . D 2 HOH 3 103 11 HOH HOH A . D 2 HOH 4 104 26 HOH HOH A . D 2 HOH 5 105 22 HOH HOH A . D 2 HOH 6 106 50 HOH HOH A . D 2 HOH 7 107 51 HOH HOH A . D 2 HOH 8 108 59 HOH HOH A . D 2 HOH 9 109 10 HOH HOH A . D 2 HOH 10 110 56 HOH HOH A . D 2 HOH 11 111 48 HOH HOH A . D 2 HOH 12 112 17 HOH HOH A . D 2 HOH 13 113 49 HOH HOH A . D 2 HOH 14 114 23 HOH HOH A . E 2 HOH 1 101 19 HOH HOH B . E 2 HOH 2 102 53 HOH HOH B . E 2 HOH 3 103 21 HOH HOH B . E 2 HOH 4 104 29 HOH HOH B . E 2 HOH 5 105 14 HOH HOH B . E 2 HOH 6 106 31 HOH HOH B . E 2 HOH 7 107 47 HOH HOH B . E 2 HOH 8 108 12 HOH HOH B . E 2 HOH 9 109 52 HOH HOH B . E 2 HOH 10 110 43 HOH HOH B . E 2 HOH 11 111 7 HOH HOH B . E 2 HOH 12 112 4 HOH HOH B . E 2 HOH 13 113 1 HOH HOH B . E 2 HOH 14 114 34 HOH HOH B . E 2 HOH 15 115 32 HOH HOH B . E 2 HOH 16 116 3 HOH HOH B . E 2 HOH 17 117 2 HOH HOH B . E 2 HOH 18 118 33 HOH HOH B . E 2 HOH 19 119 20 HOH HOH B . E 2 HOH 20 120 30 HOH HOH B . E 2 HOH 21 121 5 HOH HOH B . E 2 HOH 22 122 18 HOH HOH B . E 2 HOH 23 123 28 HOH HOH B . E 2 HOH 24 124 38 HOH HOH B . E 2 HOH 25 125 37 HOH HOH B . E 2 HOH 26 126 36 HOH HOH B . E 2 HOH 27 127 24 HOH HOH B . E 2 HOH 28 128 15 HOH HOH B . E 2 HOH 29 129 60 HOH HOH B . E 2 HOH 30 130 9 HOH HOH B . F 2 HOH 1 101 41 HOH HOH C . F 2 HOH 2 102 39 HOH HOH C . F 2 HOH 3 103 13 HOH HOH C . F 2 HOH 4 104 46 HOH HOH C . F 2 HOH 5 105 44 HOH HOH C . F 2 HOH 6 106 42 HOH HOH C . F 2 HOH 7 107 6 HOH HOH C . F 2 HOH 8 108 27 HOH HOH C . F 2 HOH 9 109 35 HOH HOH C . F 2 HOH 10 110 8 HOH HOH C . F 2 HOH 11 111 45 HOH HOH C . F 2 HOH 12 112 61 HOH HOH C . F 2 HOH 13 113 16 HOH HOH C . F 2 HOH 14 114 54 HOH HOH C . F 2 HOH 15 115 58 HOH HOH C . F 2 HOH 16 116 40 HOH HOH C . F 2 HOH 17 117 55 HOH HOH C . # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? REFMAC ? ? ? 5.8.0425 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? Aimless ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 4 # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 100.116 _cell.angle_beta_esd ? _cell.angle_gamma 90.000 _cell.angle_gamma_esd ? _cell.entry_id 8ZMV _cell.details ? _cell.formula_units_Z ? _cell.length_a 33.960 _cell.length_a_esd ? _cell.length_b 13.757 _cell.length_b_esd ? _cell.length_c 66.084 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 6 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 8ZMV _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 8ZMV _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 1.84 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 33.03 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? _exptl_crystal.pdbx_mosaic_method ? _exptl_crystal.pdbx_mosaic_block_size ? _exptl_crystal.pdbx_mosaic_block_size_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details 'Index-H6 (0.2M Sodium formate, 20% PEG 3350)' _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.temp 293 # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS EIGER X 9M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2024-03-30 _diffrn_detector.pdbx_frequency ? _diffrn_detector.id ? _diffrn_detector.number_of_axes ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.95300 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'CLSI BEAMLINE 08ID-1' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.95300 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline 08ID-1 _diffrn_source.pdbx_synchrotron_site CLSI # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 8ZMV _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.45 _reflns.d_resolution_low 32.53 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 11135 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 98.7 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 6.5 _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 15.2 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.998 _reflns.pdbx_CC_star ? _reflns.pdbx_R_split ? _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_CC_split_method ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_1 ? _reflns.pdbx_aniso_diffraction_limit_2 ? _reflns.pdbx_aniso_diffraction_limit_3 ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvalue_1 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_2 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_3 ? _reflns.pdbx_orthogonalization_convention ? _reflns.pdbx_percent_possible_ellipsoidal ? _reflns.pdbx_percent_possible_spherical ? _reflns.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns.pdbx_percent_possible_spherical_anomalous ? _reflns.pdbx_redundancy_anomalous ? _reflns.pdbx_CC_half_anomalous ? _reflns.pdbx_absDiff_over_sigma_anomalous ? _reflns.pdbx_percent_possible_anomalous ? _reflns.pdbx_observed_signal_threshold ? _reflns.pdbx_signal_type ? _reflns.pdbx_signal_details ? _reflns.pdbx_signal_software_id ? # _reflns_shell.d_res_high 1.45 _reflns_shell.d_res_low 1.47 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 546 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half 0.634 _reflns_shell.pdbx_CC_star ? _reflns_shell.pdbx_R_split ? _reflns_shell.percent_possible_all ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_percent_possible_ellipsoidal ? _reflns_shell.pdbx_percent_possible_spherical ? _reflns_shell.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns_shell.pdbx_percent_possible_spherical_anomalous ? _reflns_shell.pdbx_redundancy_anomalous ? _reflns_shell.pdbx_CC_half_anomalous ? _reflns_shell.pdbx_absDiff_over_sigma_anomalous ? _reflns_shell.pdbx_percent_possible_anomalous ? # _refine.aniso_B[1][1] -0.592 _refine.aniso_B[1][2] 0.000 _refine.aniso_B[1][3] -4.467 _refine.aniso_B[2][2] -0.022 _refine.aniso_B[2][3] -0.000 _refine.aniso_B[3][3] 2.075 _refine.B_iso_max ? _refine.B_iso_mean 25.610 _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc 0.956 _refine.correlation_coeff_Fo_to_Fc_free 0.924 _refine.details 'Hydrogens have been added in their riding positions' _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 8ZMV _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 1.450 _refine.ls_d_res_low 32.53 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 11131 _refine.ls_number_reflns_R_free 1134 _refine.ls_number_reflns_R_work 9997 _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 98.644 _refine.ls_percent_reflns_R_free 10.188 _refine.ls_R_factor_all 0.237 _refine.ls_R_factor_obs ? _refine.ls_R_factor_R_free 0.2984 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.2303 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details 'MASK BULK SOLVENT' _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R 0.128 _refine.pdbx_overall_ESU_R_Free 0.111 _refine.pdbx_solvent_vdw_probe_radii 1.200 _refine.pdbx_solvent_ion_probe_radii 0.800 _refine.pdbx_solvent_shrinkage_radii 0.800 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B 8.185 _refine.overall_SU_ML 0.132 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.details ? _refine_hist.d_res_high 1.450 _refine_hist.d_res_low 32.53 _refine_hist.number_atoms_solvent 61 _refine_hist.number_atoms_total 609 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total ? _refine_hist.pdbx_B_iso_mean_ligand ? _refine_hist.pdbx_B_iso_mean_solvent ? _refine_hist.pdbx_number_atoms_protein 548 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.008 0.012 587 ? r_bond_refined_d ? ? 'X-RAY DIFFRACTION' ? 0.001 0.017 487 ? r_bond_other_d ? ? 'X-RAY DIFFRACTION' ? 1.573 1.869 829 ? r_angle_refined_deg ? ? 'X-RAY DIFFRACTION' ? 0.527 1.692 1217 ? r_angle_other_deg ? ? 'X-RAY DIFFRACTION' ? 5.503 5.000 81 ? r_dihedral_angle_1_deg ? ? 'X-RAY DIFFRACTION' ? 9.134 10.000 36 ? r_dihedral_angle_3_deg ? ? 'X-RAY DIFFRACTION' ? 20.893 10.000 9 ? r_dihedral_angle_6_deg ? ? 'X-RAY DIFFRACTION' ? 0.070 0.200 74 ? r_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.017 0.200 3 ? r_chiral_restr_other ? ? 'X-RAY DIFFRACTION' ? 0.008 0.020 648 ? r_gen_planes_refined ? ? 'X-RAY DIFFRACTION' ? 0.000 0.020 48 ? r_gen_planes_other ? ? 'X-RAY DIFFRACTION' ? 0.205 0.200 194 ? r_nbd_refined ? ? 'X-RAY DIFFRACTION' ? 0.180 0.200 417 ? r_symmetry_nbd_other ? ? 'X-RAY DIFFRACTION' ? 0.168 0.200 318 ? r_nbtor_refined ? ? 'X-RAY DIFFRACTION' ? 0.083 0.200 181 ? r_symmetry_nbtor_other ? ? 'X-RAY DIFFRACTION' ? 0.158 0.200 30 ? r_xyhbond_nbd_refined ? ? 'X-RAY DIFFRACTION' ? 0.256 0.200 4 ? r_symmetry_nbd_refined ? ? 'X-RAY DIFFRACTION' ? 0.206 0.200 33 ? r_nbd_other ? ? 'X-RAY DIFFRACTION' ? 0.158 0.200 9 ? r_symmetry_xyhbond_nbd_refined ? ? 'X-RAY DIFFRACTION' ? 6.331 2.672 333 ? r_mcbond_it ? ? 'X-RAY DIFFRACTION' ? 6.289 2.672 333 ? r_mcbond_other ? ? 'X-RAY DIFFRACTION' ? 9.021 4.804 411 ? r_mcangle_it ? ? 'X-RAY DIFFRACTION' ? 9.021 4.807 412 ? r_mcangle_other ? ? 'X-RAY DIFFRACTION' ? 6.312 2.991 254 ? r_scbond_it ? ? 'X-RAY DIFFRACTION' ? 6.299 2.994 255 ? r_scbond_other ? ? 'X-RAY DIFFRACTION' ? 9.112 5.363 418 ? r_scangle_it ? ? 'X-RAY DIFFRACTION' ? 9.101 5.363 419 ? r_scangle_other ? ? 'X-RAY DIFFRACTION' ? 15.026 28.653 675 ? r_lrange_it ? ? 'X-RAY DIFFRACTION' ? 14.309 26.481 660 ? r_lrange_other ? ? 'X-RAY DIFFRACTION' ? 4.682 3.000 1074 ? r_rigid_bond_restr ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_R_complete _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free _refine_ls_shell.R_factor_R_free 'X-RAY DIFFRACTION' 1.450 1.488 . . 86 709 96.2470 . . . . 0.314 . . . . . . . . . . . 0.312 'X-RAY DIFFRACTION' 1.488 1.528 . . 84 694 93.7349 . . . . 0.273 . . . . . . . . . . . 0.270 'X-RAY DIFFRACTION' 1.528 1.573 . . 83 660 100.0000 . . . . 0.285 . . . . . . . . . . . 0.305 'X-RAY DIFFRACTION' 1.573 1.621 . . 99 648 100.0000 . . . . 0.257 . . . . . . . . . . . 0.281 'X-RAY DIFFRACTION' 1.621 1.674 . . 72 663 100.0000 . . . . 0.234 . . . . . . . . . . . 0.271 'X-RAY DIFFRACTION' 1.674 1.732 . . 70 633 96.4335 . . . . 0.218 . . . . . . . . . . . 0.242 'X-RAY DIFFRACTION' 1.732 1.798 . . 50 599 100.0000 . . . . 0.226 . . . . . . . . . . . 0.304 'X-RAY DIFFRACTION' 1.798 1.871 . . 77 581 99.6970 . . . . 0.234 . . . . . . . . . . . 0.284 'X-RAY DIFFRACTION' 1.871 1.954 . . 75 580 99.5441 . . . . 0.262 . . . . . . . . . . . 0.265 'X-RAY DIFFRACTION' 1.954 2.049 . . 57 518 98.2906 . . . . 0.230 . . . . . . . . . . . 0.324 'X-RAY DIFFRACTION' 2.049 2.159 . . 72 513 99.6593 . . . . 0.218 . . . . . . . . . . . 0.288 'X-RAY DIFFRACTION' 2.159 2.289 . . 58 517 100.0000 . . . . 0.219 . . . . . . . . . . . 0.277 'X-RAY DIFFRACTION' 2.289 2.447 . . 34 463 99.5992 . . . . 0.225 . . . . . . . . . . . 0.290 'X-RAY DIFFRACTION' 2.447 2.641 . . 42 448 100.0000 . . . . 0.240 . . . . . . . . . . . 0.300 'X-RAY DIFFRACTION' 2.641 2.892 . . 45 399 100.0000 . . . . 0.207 . . . . . . . . . . . 0.314 'X-RAY DIFFRACTION' 2.892 3.230 . . 48 360 99.7555 . . . . 0.240 . . . . . . . . . . . 0.360 'X-RAY DIFFRACTION' 3.230 3.723 . . 35 333 99.1914 . . . . 0.220 . . . . . . . . . . . 0.279 'X-RAY DIFFRACTION' 3.723 4.545 . . 20 301 97.5684 . . . . 0.213 . . . . . . . . . . . 0.272 'X-RAY DIFFRACTION' 4.545 6.366 . . 17 232 99.2032 . . . . 0.204 . . . . . . . . . . . 0.277 'X-RAY DIFFRACTION' 6.366 32.53 . . 10 146 95.1219 . . . . 0.332 . . . . . . . . . . . 0.454 # _struct.entry_id 8ZMV _struct.title 'Structure of a triple-helix region of human Collagen type XVII from Trautec' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 8ZMV _struct_keywords.text 'Human collagen XVII, Triple-helix, STRUCTURAL PROTEIN' _struct_keywords.pdbx_keywords 'STRUCTURAL PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 1 ? D N N 2 ? E N N 2 ? F N N 2 ? # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 8ZMV _struct_ref.pdbx_db_accession 8ZMV _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 8ZMV A 1 ? 30 ? 8ZMV 1 ? 30 ? 1 30 2 1 8ZMV B 1 ? 30 ? 8ZMV 1 ? 30 ? 1 30 3 1 8ZMV C 1 ? 30 ? 8ZMV 1 ? 30 ? 1 30 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 5090 ? 1 MORE -22 ? 1 'SSA (A^2)' 4990 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support homology _pdbx_struct_assembly_auth_evidence.details ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A HYP 2 C ? ? ? 1_555 A GLY 3 N ? ? A HYP 2 A GLY 3 1_555 ? ? ? ? ? ? ? 1.330 ? ? covale2 covale both ? A PRO 4 C ? ? ? 1_555 A HYP 5 N ? ? A PRO 4 A HYP 5 1_555 ? ? ? ? ? ? ? 1.350 ? ? covale3 covale both ? A HYP 5 C ? ? ? 1_555 A GLY 6 N ? ? A HYP 5 A GLY 6 1_555 ? ? ? ? ? ? ? 1.326 ? ? covale4 covale both ? A PRO 7 C ? ? ? 1_555 A HYP 8 N ? ? A PRO 7 A HYP 8 1_555 ? ? ? ? ? ? ? 1.353 ? ? covale5 covale both ? A HYP 8 C ? ? ? 1_555 A GLY 9 N ? ? A HYP 8 A GLY 9 1_555 ? ? ? ? ? ? ? 1.335 ? ? covale6 covale both ? A PRO 22 C ? ? ? 1_555 A HYP 23 N ? ? A PRO 22 A HYP 23 1_555 ? ? ? ? ? ? ? 1.332 ? ? covale7 covale both ? A HYP 23 C ? ? ? 1_555 A GLY 24 N ? ? A HYP 23 A GLY 24 1_555 ? ? ? ? ? ? ? 1.327 ? ? covale8 covale both ? A PRO 25 C ? ? ? 1_555 A HYP 26 N ? ? A PRO 25 A HYP 26 1_555 ? ? ? ? ? ? ? 1.352 ? ? covale9 covale both ? A HYP 26 C ? ? ? 1_555 A GLY 27 N ? ? A HYP 26 A GLY 27 1_555 ? ? ? ? ? ? ? 1.325 ? ? covale10 covale both ? A PRO 28 C ? ? ? 1_555 A HYP 29 N ? ? A PRO 28 A HYP 29 1_555 ? ? ? ? ? ? ? 1.351 ? ? covale11 covale both ? B PRO 1 C ? ? ? 1_555 B HYP 2 N ? ? B PRO 1 B HYP 2 1_555 ? ? ? ? ? ? ? 1.352 ? ? covale12 covale both ? B HYP 2 C ? ? ? 1_555 B GLY 3 N ? ? B HYP 2 B GLY 3 1_555 ? ? ? ? ? ? ? 1.334 ? ? covale13 covale both ? B PRO 4 C ? ? ? 1_555 B HYP 5 N ? ? B PRO 4 B HYP 5 1_555 ? ? ? ? ? ? ? 1.351 ? ? covale14 covale both ? B HYP 5 C ? ? ? 1_555 B GLY 6 N ? ? B HYP 5 B GLY 6 1_555 ? ? ? ? ? ? ? 1.341 ? ? covale15 covale both ? B PRO 7 C ? ? ? 1_555 B HYP 8 N ? ? B PRO 7 B HYP 8 1_555 ? ? ? ? ? ? ? 1.351 ? ? covale16 covale both ? B HYP 8 C ? ? ? 1_555 B GLY 9 N ? ? B HYP 8 B GLY 9 1_555 ? ? ? ? ? ? ? 1.330 ? ? covale17 covale both ? B PRO 22 C ? ? ? 1_555 B HYP 23 N ? ? B PRO 22 B HYP 23 1_555 ? ? ? ? ? ? ? 1.349 ? ? covale18 covale both ? B HYP 23 C ? ? ? 1_555 B GLY 24 N ? ? B HYP 23 B GLY 24 1_555 ? ? ? ? ? ? ? 1.322 ? ? covale19 covale both ? B PRO 25 C ? ? ? 1_555 B HYP 26 N ? ? B PRO 25 B HYP 26 1_555 ? ? ? ? ? ? ? 1.354 ? ? covale20 covale both ? B HYP 26 C ? ? ? 1_555 B GLY 27 N ? ? B HYP 26 B GLY 27 1_555 ? ? ? ? ? ? ? 1.340 ? ? covale21 covale both ? B PRO 28 C ? ? ? 1_555 B HYP 29 N ? ? B PRO 28 B HYP 29 1_555 ? ? ? ? ? ? ? 1.345 ? ? covale22 covale both ? B HYP 29 C ? ? ? 1_555 B GLY 30 N ? ? B HYP 29 B GLY 30 1_555 ? ? ? ? ? ? ? 1.339 ? ? covale23 covale both ? C PRO 4 C ? ? ? 1_555 C HYP 5 N ? ? C PRO 4 C HYP 5 1_555 ? ? ? ? ? ? ? 1.356 ? ? covale24 covale both ? C HYP 5 C ? ? ? 1_555 C GLY 6 N ? ? C HYP 5 C GLY 6 1_555 ? ? ? ? ? ? ? 1.343 ? ? covale25 covale both ? C PRO 7 C ? ? ? 1_555 C HYP 8 N ? ? C PRO 7 C HYP 8 1_555 ? ? ? ? ? ? ? 1.354 ? ? covale26 covale both ? C HYP 8 C ? ? ? 1_555 C GLY 9 N ? ? C HYP 8 C GLY 9 1_555 ? ? ? ? ? ? ? 1.328 ? ? covale27 covale both ? C PRO 22 C ? ? ? 1_555 C HYP 23 N ? ? C PRO 22 C HYP 23 1_555 ? ? ? ? ? ? ? 1.352 ? ? covale28 covale both ? C HYP 23 C ? ? ? 1_555 C GLY 24 N ? ? C HYP 23 C GLY 24 1_555 ? ? ? ? ? ? ? 1.339 ? ? covale29 covale both ? C PRO 25 C ? ? ? 1_555 C HYP 26 N ? ? C PRO 25 C HYP 26 1_555 ? ? ? ? ? ? ? 1.349 ? ? covale30 covale both ? C HYP 26 C ? ? ? 1_555 C GLY 27 N ? ? C HYP 26 C GLY 27 1_555 ? ? ? ? ? ? ? 1.320 ? ? covale31 covale both ? C PRO 28 C ? ? ? 1_555 C HYP 29 N ? ? C PRO 28 C HYP 29 1_555 ? ? ? ? ? ? ? 1.359 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # _pdbx_entry_details.entry_id 8ZMV _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.has_ligand_of_interest Y _pdbx_entry_details.has_protein_modification ? # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A PRO 1 ? A PRO 1 2 1 Y 1 A GLY 30 ? A GLY 30 3 1 Y 1 C PRO 1 ? C PRO 1 4 1 Y 1 C HYP 2 ? C HYP 2 5 1 Y 1 C GLY 3 ? C GLY 3 6 1 Y 1 C GLY 30 ? C GLY 30 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ASP N N N N 1 ASP CA C N S 2 ASP C C N N 3 ASP O O N N 4 ASP CB C N N 5 ASP CG C N N 6 ASP OD1 O N N 7 ASP OD2 O N N 8 ASP OXT O N N 9 ASP H H N N 10 ASP H2 H N N 11 ASP HA H N N 12 ASP HB2 H N N 13 ASP HB3 H N N 14 ASP HD2 H N N 15 ASP HXT H N N 16 GLN N N N N 17 GLN CA C N S 18 GLN C C N N 19 GLN O O N N 20 GLN CB C N N 21 GLN CG C N N 22 GLN CD C N N 23 GLN OE1 O N N 24 GLN NE2 N N N 25 GLN OXT O N N 26 GLN H H N N 27 GLN H2 H N N 28 GLN HA H N N 29 GLN HB2 H N N 30 GLN HB3 H N N 31 GLN HG2 H N N 32 GLN HG3 H N N 33 GLN HE21 H N N 34 GLN HE22 H N N 35 GLN HXT H N N 36 GLY N N N N 37 GLY CA C N N 38 GLY C C N N 39 GLY O O N N 40 GLY OXT O N N 41 GLY H H N N 42 GLY H2 H N N 43 GLY HA2 H N N 44 GLY HA3 H N N 45 GLY HXT H N N 46 HOH O O N N 47 HOH H1 H N N 48 HOH H2 H N N 49 HYP N N N N 50 HYP CA C N S 51 HYP C C N N 52 HYP O O N N 53 HYP CB C N N 54 HYP CG C N R 55 HYP CD C N N 56 HYP OD1 O N N 57 HYP OXT O N N 58 HYP H H N N 59 HYP HA H N N 60 HYP HB2 H N N 61 HYP HB3 H N N 62 HYP HG H N N 63 HYP HD22 H N N 64 HYP HD23 H N N 65 HYP HD1 H N N 66 HYP HXT H N N 67 LYS N N N N 68 LYS CA C N S 69 LYS C C N N 70 LYS O O N N 71 LYS CB C N N 72 LYS CG C N N 73 LYS CD C N N 74 LYS CE C N N 75 LYS NZ N N N 76 LYS OXT O N N 77 LYS H H N N 78 LYS H2 H N N 79 LYS HA H N N 80 LYS HB2 H N N 81 LYS HB3 H N N 82 LYS HG2 H N N 83 LYS HG3 H N N 84 LYS HD2 H N N 85 LYS HD3 H N N 86 LYS HE2 H N N 87 LYS HE3 H N N 88 LYS HZ1 H N N 89 LYS HZ2 H N N 90 LYS HZ3 H N N 91 LYS HXT H N N 92 PRO N N N N 93 PRO CA C N S 94 PRO C C N N 95 PRO O O N N 96 PRO CB C N N 97 PRO CG C N N 98 PRO CD C N N 99 PRO OXT O N N 100 PRO H H N N 101 PRO HA H N N 102 PRO HB2 H N N 103 PRO HB3 H N N 104 PRO HG2 H N N 105 PRO HG3 H N N 106 PRO HD2 H N N 107 PRO HD3 H N N 108 PRO HXT H N N 109 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ASP N CA sing N N 1 ASP N H sing N N 2 ASP N H2 sing N N 3 ASP CA C sing N N 4 ASP CA CB sing N N 5 ASP CA HA sing N N 6 ASP C O doub N N 7 ASP C OXT sing N N 8 ASP CB CG sing N N 9 ASP CB HB2 sing N N 10 ASP CB HB3 sing N N 11 ASP CG OD1 doub N N 12 ASP CG OD2 sing N N 13 ASP OD2 HD2 sing N N 14 ASP OXT HXT sing N N 15 GLN N CA sing N N 16 GLN N H sing N N 17 GLN N H2 sing N N 18 GLN CA C sing N N 19 GLN CA CB sing N N 20 GLN CA HA sing N N 21 GLN C O doub N N 22 GLN C OXT sing N N 23 GLN CB CG sing N N 24 GLN CB HB2 sing N N 25 GLN CB HB3 sing N N 26 GLN CG CD sing N N 27 GLN CG HG2 sing N N 28 GLN CG HG3 sing N N 29 GLN CD OE1 doub N N 30 GLN CD NE2 sing N N 31 GLN NE2 HE21 sing N N 32 GLN NE2 HE22 sing N N 33 GLN OXT HXT sing N N 34 GLY N CA sing N N 35 GLY N H sing N N 36 GLY N H2 sing N N 37 GLY CA C sing N N 38 GLY CA HA2 sing N N 39 GLY CA HA3 sing N N 40 GLY C O doub N N 41 GLY C OXT sing N N 42 GLY OXT HXT sing N N 43 HOH O H1 sing N N 44 HOH O H2 sing N N 45 HYP N CA sing N N 46 HYP N CD sing N N 47 HYP N H sing N N 48 HYP CA C sing N N 49 HYP CA CB sing N N 50 HYP CA HA sing N N 51 HYP C O doub N N 52 HYP C OXT sing N N 53 HYP CB CG sing N N 54 HYP CB HB2 sing N N 55 HYP CB HB3 sing N N 56 HYP CG CD sing N N 57 HYP CG OD1 sing N N 58 HYP CG HG sing N N 59 HYP CD HD22 sing N N 60 HYP CD HD23 sing N N 61 HYP OD1 HD1 sing N N 62 HYP OXT HXT sing N N 63 LYS N CA sing N N 64 LYS N H sing N N 65 LYS N H2 sing N N 66 LYS CA C sing N N 67 LYS CA CB sing N N 68 LYS CA HA sing N N 69 LYS C O doub N N 70 LYS C OXT sing N N 71 LYS CB CG sing N N 72 LYS CB HB2 sing N N 73 LYS CB HB3 sing N N 74 LYS CG CD sing N N 75 LYS CG HG2 sing N N 76 LYS CG HG3 sing N N 77 LYS CD CE sing N N 78 LYS CD HD2 sing N N 79 LYS CD HD3 sing N N 80 LYS CE NZ sing N N 81 LYS CE HE2 sing N N 82 LYS CE HE3 sing N N 83 LYS NZ HZ1 sing N N 84 LYS NZ HZ2 sing N N 85 LYS NZ HZ3 sing N N 86 LYS OXT HXT sing N N 87 PRO N CA sing N N 88 PRO N CD sing N N 89 PRO N H sing N N 90 PRO CA C sing N N 91 PRO CA CB sing N N 92 PRO CA HA sing N N 93 PRO C O doub N N 94 PRO C OXT sing N N 95 PRO CB CG sing N N 96 PRO CB HB2 sing N N 97 PRO CB HB3 sing N N 98 PRO CG CD sing N N 99 PRO CG HG2 sing N N 100 PRO CG HG3 sing N N 101 PRO CD HD2 sing N N 102 PRO CD HD3 sing N N 103 PRO OXT HXT sing N N 104 # _pdbx_audit_support.funding_organization 'Other private' _pdbx_audit_support.country ? _pdbx_audit_support.grant_number CQ20230004/CE20235002/CQ20230005 _pdbx_audit_support.ordinal 1 # _pdbx_entity_instance_feature.ordinal 1 _pdbx_entity_instance_feature.comp_id HYP _pdbx_entity_instance_feature.asym_id ? _pdbx_entity_instance_feature.seq_num ? _pdbx_entity_instance_feature.auth_comp_id HYP _pdbx_entity_instance_feature.auth_asym_id ? _pdbx_entity_instance_feature.auth_seq_num ? _pdbx_entity_instance_feature.feature_type 'SUBJECT OF INVESTIGATION' _pdbx_entity_instance_feature.details ? # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1K6M _pdbx_initial_refinement_model.details ? # _atom_sites.entry_id 8ZMV _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.Cartn_transform_axes ? _atom_sites.fract_transf_matrix[1][1] 0.029446 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.005254 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.072690 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.015371 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol _atom_type.pdbx_scat_Z _atom_type.pdbx_N_electrons _atom_type.scat_Cromer_Mann_a1 _atom_type.scat_Cromer_Mann_b1 _atom_type.scat_Cromer_Mann_a2 _atom_type.scat_Cromer_Mann_b2 _atom_type.scat_Cromer_Mann_a3 _atom_type.scat_Cromer_Mann_b3 _atom_type.scat_Cromer_Mann_a4 _atom_type.scat_Cromer_Mann_b4 C 6 6 2.3103 20.8439 1.0201 10.2075 1.5888 0.5687 0.8651 51.6512 H 1 1 0.4930 10.5109 0.3229 26.1257 0.1402 3.1424 0.0408 57.7997 N 7 7 12.2220 0.0057 3.1346 9.8933 2.0141 28.9975 1.1672 0.5826 O 8 8 3.0487 13.2771 2.2870 5.7011 1.5464 0.3239 0.8671 32.9089 # loop_