data_9A2R # _entry.id 9A2R # loop_ _atom_type.symbol C H N O S # loop_ _audit_author.name _audit_author.pdbx_ordinal "Stahl, K." 1 "Graziadei, A." 2 "Dau, T." 3 "Brock, O." 4 "Rappsilber, J." 5 # loop_ _audit_conform.dict_location _audit_conform.dict_name _audit_conform.dict_version https://mmcif.wwpdb.org/dictionaries/ascii/mmcif_ihm_ext.dic mmcif_ihm_ext.dic 1.26 http://mmcif.wwpdb.org/dictionaries/ascii/mmcif_pdbx_v50.dic mmcif_pdbx.dic 5.395 # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB-Dev PDBDEV_00000176 PDBDEV_00000176 ? PDB 9A2R pdb_00009a2r 10.2210/pdb9a2r/pdb # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 9A2R _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2023-02-03 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2023-02-24 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # _ihm_entry_collection.id PDBDEV_G_1000001 _ihm_entry_collection.name . _ihm_entry_collection.details 'Collection of entries belonging to the publication: "Protein structure prediction with in-cell photo-crosslinking mass spectrometry and deep learning"' # _ihm_entry_collection_mapping.collection_id PDBDEV_G_1000001 _ihm_entry_collection_mapping.entry_id 9A2R # loop_ _chem_comp.formula _chem_comp.formula_weight _chem_comp.id _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.type "C3 H7 N O2" 89.094 ALA . ALANINE . "L-peptide linking" "C6 H15 N4 O2 1" 175.212 ARG . ARGININE . "L-peptide linking" "C4 H8 N2 O3" 132.119 ASN . ASPARAGINE . "L-peptide linking" "C4 H7 N O4" 133.103 ASP . "ASPARTIC ACID" . "L-peptide linking" "C3 H7 N O2 S" 121.154 CYS . CYSTEINE . "L-peptide linking" "C5 H10 N2 O3" 146.146 GLN . GLUTAMINE . "L-peptide linking" "C5 H9 N O4" 147.13 GLU . "GLUTAMIC ACID" . "L-peptide linking" "C2 H5 N O2" 75.067 GLY . GLYCINE . "peptide linking" "C6 H10 N3 O2 1" 156.165 HIS . HISTIDINE . "L-peptide linking" "C6 H13 N O2" 131.175 ILE . ISOLEUCINE . "L-peptide linking" "C6 H13 N O2" 131.175 LEU . LEUCINE . "L-peptide linking" "C6 H15 N2 O2 1" 147.198 LYS . LYSINE . "L-peptide linking" "C5 H11 N O2 S" 149.208 MET . METHIONINE . "L-peptide linking" "C9 H11 N O2" 165.192 PHE . PHENYLALANINE . "L-peptide linking" "C5 H9 N O2" 115.132 PRO . PROLINE . "L-peptide linking" "C3 H7 N O3" 105.093 SER . SERINE . "L-peptide linking" "C4 H9 N O3" 119.12 THR . THREONINE . "L-peptide linking" "C11 H12 N2 O2" 204.229 TRP . TRYPTOPHAN . "L-peptide linking" "C9 H11 N O3" 181.191 TYR . TYROSINE . "L-peptide linking" "C5 H11 N O2" 117.148 VAL . VALINE . "L-peptide linking" # _citation.country . _citation.id 1 _citation.journal_abbrev "Nature Biotechnology" _citation.journal_id_ASTM . _citation.journal_id_CSD . _citation.journal_id_ISSN . _citation.journal_issue . _citation.journal_volume . _citation.page_first . _citation.page_last . _citation.pdbx_database_id_DOI 10.1038/s41587-023-01704-z _citation.pdbx_database_id_PubMed 36941363 _citation.title "Protein structure prediction with in-cell photo-crosslinking mass spectrometry and deep learning" _citation.year 2023 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal 1 "Stahl, K." 1 1 "Graziadei, A." 2 1 "Dau, T." 3 1 "Brock, O." 4 1 "Rappsilber, J." 5 # _entity.details . _entity.formula_weight 64506.38 _entity.id 1 _entity.pdbx_description P0ABB0 _entity.pdbx_number_of_molecules 1 _entity.src_method NAT _entity.type polymer # _entity_poly.entity_id 1 _entity_poly.nstd_chirality . _entity_poly.nstd_linkage NO _entity_poly.nstd_monomer NO _entity_poly.pdbx_seq_one_letter_code MQLNSTEISELIKQRIAQFNVVSEAHNEGTIVSVSDGVIRIHGLADCMQGEMISLPGNRYAIALNLERDSVGAVVMGPYADLAEGMKVKCTGRILEVPVGRGLLGRVVNTLGAPIDGKGPLDHDGFSAVEAIAPGVIERQSVDQPVQTGYKAVDSMIPIGRGQRELIIGDRQTGKTALAIDAIINQRDSGIKCIYVAIGQKASTISNVVRKLEEHGALANTIVVVATASESAALQYLAPYAGCAMGEYFRDRGEDALIIYDDLSKQAVAYRQISLLLRRPPGREAFPGDVFYLHSRLLERAARVNAEYVEAFTKGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLETNLFNAGIRPAVNPGISVSRVGGAAQTKIMKKLSGGIRTALAQYRELAAFSQFASDLDDATRKQLDHGQKVTELLKQKQYAPMSVAQQSLVLFAAERGYLADVELSKIGSFEAALLAYVDRDHAPLMQEINQTGGYNDEIEGKLKGILDSFKATQSW _entity_poly.pdbx_seq_one_letter_code_can MQLNSTEISELIKQRIAQFNVVSEAHNEGTIVSVSDGVIRIHGLADCMQGEMISLPGNRYAIALNLERDSVGAVVMGPYADLAEGMKVKCTGRILEVPVGRGLLGRVVNTLGAPIDGKGPLDHDGFSAVEAIAPGVIERQSVDQPVQTGYKAVDSMIPIGRGQRELIIGDRQTGKTALAIDAIINQRDSGIKCIYVAIGQKASTISNVVRKLEEHGALANTIVVVATASESAALQYLAPYAGCAMGEYFRDRGEDALIIYDDLSKQAVAYRQISLLLRRPPGREAFPGDVFYLHSRLLERAARVNAEYVEAFTKGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLETNLFNAGIRPAVNPGISVSRVGGAAQTKIMKKLSGGIRTALAQYRELAAFSQFASDLDDATRKQLDHGQKVTELLKQKQYAPMSVAQQSLVLFAAERGYLADVELSKIGSFEAALLAYVDRDHAPLMQEINQTGGYNDEIEGKLKGILDSFKATQSW _entity_poly.pdbx_sequence_evidence_code . _entity_poly.pdbx_strand_id A _entity_poly.type polypeptide(L) # loop_ _entity_poly_seq.entity_id _entity_poly_seq.hetero _entity_poly_seq.mon_id _entity_poly_seq.num 1 . MET 1 1 . GLN 2 1 . LEU 3 1 . ASN 4 1 . SER 5 1 . THR 6 1 . GLU 7 1 . ILE 8 1 . SER 9 1 . GLU 10 1 . LEU 11 1 . ILE 12 1 . LYS 13 1 . GLN 14 1 . ARG 15 1 . ILE 16 1 . ALA 17 1 . GLN 18 1 . PHE 19 1 . ASN 20 1 . VAL 21 1 . VAL 22 1 . SER 23 1 . GLU 24 1 . ALA 25 1 . HIS 26 1 . ASN 27 1 . GLU 28 1 . GLY 29 1 . THR 30 1 . ILE 31 1 . VAL 32 1 . SER 33 1 . VAL 34 1 . SER 35 1 . ASP 36 1 . GLY 37 1 . VAL 38 1 . ILE 39 1 . ARG 40 1 . ILE 41 1 . HIS 42 1 . GLY 43 1 . LEU 44 1 . ALA 45 1 . ASP 46 1 . CYS 47 1 . MET 48 1 . GLN 49 1 . GLY 50 1 . GLU 51 1 . MET 52 1 . ILE 53 1 . SER 54 1 . LEU 55 1 . PRO 56 1 . GLY 57 1 . ASN 58 1 . ARG 59 1 . TYR 60 1 . ALA 61 1 . ILE 62 1 . ALA 63 1 . LEU 64 1 . ASN 65 1 . LEU 66 1 . GLU 67 1 . ARG 68 1 . ASP 69 1 . SER 70 1 . VAL 71 1 . GLY 72 1 . ALA 73 1 . VAL 74 1 . VAL 75 1 . MET 76 1 . GLY 77 1 . PRO 78 1 . TYR 79 1 . ALA 80 1 . ASP 81 1 . LEU 82 1 . ALA 83 1 . GLU 84 1 . GLY 85 1 . MET 86 1 . LYS 87 1 . VAL 88 1 . LYS 89 1 . CYS 90 1 . THR 91 1 . GLY 92 1 . ARG 93 1 . ILE 94 1 . LEU 95 1 . GLU 96 1 . VAL 97 1 . PRO 98 1 . VAL 99 1 . GLY 100 1 . ARG 101 1 . GLY 102 1 . LEU 103 1 . LEU 104 1 . GLY 105 1 . ARG 106 1 . VAL 107 1 . VAL 108 1 . ASN 109 1 . THR 110 1 . LEU 111 1 . GLY 112 1 . ALA 113 1 . PRO 114 1 . ILE 115 1 . ASP 116 1 . GLY 117 1 . LYS 118 1 . GLY 119 1 . PRO 120 1 . LEU 121 1 . ASP 122 1 . HIS 123 1 . ASP 124 1 . GLY 125 1 . PHE 126 1 . SER 127 1 . ALA 128 1 . VAL 129 1 . GLU 130 1 . ALA 131 1 . ILE 132 1 . ALA 133 1 . PRO 134 1 . GLY 135 1 . VAL 136 1 . ILE 137 1 . GLU 138 1 . ARG 139 1 . GLN 140 1 . SER 141 1 . VAL 142 1 . ASP 143 1 . GLN 144 1 . PRO 145 1 . VAL 146 1 . GLN 147 1 . THR 148 1 . GLY 149 1 . TYR 150 1 . LYS 151 1 . ALA 152 1 . VAL 153 1 . ASP 154 1 . SER 155 1 . MET 156 1 . ILE 157 1 . PRO 158 1 . ILE 159 1 . GLY 160 1 . ARG 161 1 . GLY 162 1 . GLN 163 1 . ARG 164 1 . GLU 165 1 . LEU 166 1 . ILE 167 1 . ILE 168 1 . GLY 169 1 . ASP 170 1 . ARG 171 1 . GLN 172 1 . THR 173 1 . GLY 174 1 . LYS 175 1 . THR 176 1 . ALA 177 1 . LEU 178 1 . ALA 179 1 . ILE 180 1 . ASP 181 1 . ALA 182 1 . ILE 183 1 . ILE 184 1 . ASN 185 1 . GLN 186 1 . ARG 187 1 . ASP 188 1 . SER 189 1 . GLY 190 1 . ILE 191 1 . LYS 192 1 . CYS 193 1 . ILE 194 1 . TYR 195 1 . VAL 196 1 . ALA 197 1 . ILE 198 1 . GLY 199 1 . GLN 200 1 . LYS 201 1 . ALA 202 1 . SER 203 1 . THR 204 1 . ILE 205 1 . SER 206 1 . ASN 207 1 . VAL 208 1 . VAL 209 1 . ARG 210 1 . LYS 211 1 . LEU 212 1 . GLU 213 1 . GLU 214 1 . HIS 215 1 . GLY 216 1 . ALA 217 1 . LEU 218 1 . ALA 219 1 . ASN 220 1 . THR 221 1 . ILE 222 1 . VAL 223 1 . VAL 224 1 . VAL 225 1 . ALA 226 1 . THR 227 1 . ALA 228 1 . SER 229 1 . GLU 230 1 . SER 231 1 . ALA 232 1 . ALA 233 1 . LEU 234 1 . GLN 235 1 . TYR 236 1 . LEU 237 1 . ALA 238 1 . PRO 239 1 . TYR 240 1 . ALA 241 1 . GLY 242 1 . CYS 243 1 . ALA 244 1 . MET 245 1 . GLY 246 1 . GLU 247 1 . TYR 248 1 . PHE 249 1 . ARG 250 1 . ASP 251 1 . ARG 252 1 . GLY 253 1 . GLU 254 1 . ASP 255 1 . ALA 256 1 . LEU 257 1 . ILE 258 1 . ILE 259 1 . TYR 260 1 . ASP 261 1 . ASP 262 1 . LEU 263 1 . SER 264 1 . LYS 265 1 . GLN 266 1 . ALA 267 1 . VAL 268 1 . ALA 269 1 . TYR 270 1 . ARG 271 1 . GLN 272 1 . ILE 273 1 . SER 274 1 . LEU 275 1 . LEU 276 1 . LEU 277 1 . ARG 278 1 . ARG 279 1 . PRO 280 1 . PRO 281 1 . GLY 282 1 . ARG 283 1 . GLU 284 1 . ALA 285 1 . PHE 286 1 . PRO 287 1 . GLY 288 1 . ASP 289 1 . VAL 290 1 . PHE 291 1 . TYR 292 1 . LEU 293 1 . HIS 294 1 . SER 295 1 . ARG 296 1 . LEU 297 1 . LEU 298 1 . GLU 299 1 . ARG 300 1 . ALA 301 1 . ALA 302 1 . ARG 303 1 . VAL 304 1 . ASN 305 1 . ALA 306 1 . GLU 307 1 . TYR 308 1 . VAL 309 1 . GLU 310 1 . ALA 311 1 . PHE 312 1 . THR 313 1 . LYS 314 1 . GLY 315 1 . GLU 316 1 . VAL 317 1 . LYS 318 1 . GLY 319 1 . LYS 320 1 . THR 321 1 . GLY 322 1 . SER 323 1 . LEU 324 1 . THR 325 1 . ALA 326 1 . LEU 327 1 . PRO 328 1 . ILE 329 1 . ILE 330 1 . GLU 331 1 . THR 332 1 . GLN 333 1 . ALA 334 1 . GLY 335 1 . ASP 336 1 . VAL 337 1 . SER 338 1 . ALA 339 1 . PHE 340 1 . VAL 341 1 . PRO 342 1 . THR 343 1 . ASN 344 1 . VAL 345 1 . ILE 346 1 . SER 347 1 . ILE 348 1 . THR 349 1 . ASP 350 1 . GLY 351 1 . GLN 352 1 . ILE 353 1 . PHE 354 1 . LEU 355 1 . GLU 356 1 . THR 357 1 . ASN 358 1 . LEU 359 1 . PHE 360 1 . ASN 361 1 . ALA 362 1 . GLY 363 1 . ILE 364 1 . ARG 365 1 . PRO 366 1 . ALA 367 1 . VAL 368 1 . ASN 369 1 . PRO 370 1 . GLY 371 1 . ILE 372 1 . SER 373 1 . VAL 374 1 . SER 375 1 . ARG 376 1 . VAL 377 1 . GLY 378 1 . GLY 379 1 . ALA 380 1 . ALA 381 1 . GLN 382 1 . THR 383 1 . LYS 384 1 . ILE 385 1 . MET 386 1 . LYS 387 1 . LYS 388 1 . LEU 389 1 . SER 390 1 . GLY 391 1 . GLY 392 1 . ILE 393 1 . ARG 394 1 . THR 395 1 . ALA 396 1 . LEU 397 1 . ALA 398 1 . GLN 399 1 . TYR 400 1 . ARG 401 1 . GLU 402 1 . LEU 403 1 . ALA 404 1 . ALA 405 1 . PHE 406 1 . SER 407 1 . GLN 408 1 . PHE 409 1 . ALA 410 1 . SER 411 1 . ASP 412 1 . LEU 413 1 . ASP 414 1 . ASP 415 1 . ALA 416 1 . THR 417 1 . ARG 418 1 . LYS 419 1 . GLN 420 1 . LEU 421 1 . ASP 422 1 . HIS 423 1 . GLY 424 1 . GLN 425 1 . LYS 426 1 . VAL 427 1 . THR 428 1 . GLU 429 1 . LEU 430 1 . LEU 431 1 . LYS 432 1 . GLN 433 1 . LYS 434 1 . GLN 435 1 . TYR 436 1 . ALA 437 1 . PRO 438 1 . MET 439 1 . SER 440 1 . VAL 441 1 . ALA 442 1 . GLN 443 1 . GLN 444 1 . SER 445 1 . LEU 446 1 . VAL 447 1 . LEU 448 1 . PHE 449 1 . ALA 450 1 . ALA 451 1 . GLU 452 1 . ARG 453 1 . GLY 454 1 . TYR 455 1 . LEU 456 1 . ALA 457 1 . ASP 458 1 . VAL 459 1 . GLU 460 1 . LEU 461 1 . SER 462 1 . LYS 463 1 . ILE 464 1 . GLY 465 1 . SER 466 1 . PHE 467 1 . GLU 468 1 . ALA 469 1 . ALA 470 1 . LEU 471 1 . LEU 472 1 . ALA 473 1 . TYR 474 1 . VAL 475 1 . ASP 476 1 . ARG 477 1 . ASP 478 1 . HIS 479 1 . ALA 480 1 . PRO 481 1 . LEU 482 1 . MET 483 1 . GLN 484 1 . GLU 485 1 . ILE 486 1 . ASN 487 1 . GLN 488 1 . THR 489 1 . GLY 490 1 . GLY 491 1 . TYR 492 1 . ASN 493 1 . ASP 494 1 . GLU 495 1 . ILE 496 1 . GLU 497 1 . GLY 498 1 . LYS 499 1 . LEU 500 1 . LYS 501 1 . GLY 502 1 . ILE 503 1 . LEU 504 1 . ASP 505 1 . SER 506 1 . PHE 507 1 . LYS 508 1 . ALA 509 1 . THR 510 1 . GLN 511 1 . SER 512 1 . TRP 513 # _ihm_chemical_component_descriptor.auth_name L-Photo-Leucine _ihm_chemical_component_descriptor.chemical_name . _ihm_chemical_component_descriptor.common_name L-Photo-Leucine _ihm_chemical_component_descriptor.details . _ihm_chemical_component_descriptor.id 1 _ihm_chemical_component_descriptor.inchi 1S/C5H9N3O2/c1-5(7-8-5)2-3(6)4(9)10/h3H,2,6H2,1H3,(H,9,10)/t3-/m0/s1 _ihm_chemical_component_descriptor.inchi_key MJRDGTVDJKACQZ-VKHMYHEASA-N _ihm_chemical_component_descriptor.smiles CC1(C[C@H](N)C(O)=O)N=N1 _ihm_chemical_component_descriptor.smiles_canonical . # loop_ _ihm_cross_link_list.comp_id_1 _ihm_cross_link_list.comp_id_2 _ihm_cross_link_list.dataset_list_id _ihm_cross_link_list.details _ihm_cross_link_list.entity_description_1 _ihm_cross_link_list.entity_description_2 _ihm_cross_link_list.entity_id_1 _ihm_cross_link_list.entity_id_2 _ihm_cross_link_list.group_id _ihm_cross_link_list.id _ihm_cross_link_list.linker_chem_comp_descriptor_id _ihm_cross_link_list.linker_type _ihm_cross_link_list.seq_id_1 _ihm_cross_link_list.seq_id_2 TYR LEU 1 . P0ABB0 P0ABB0 1 1 1 1 1 L-Photo-Leucine 60 111 ALA LEU 1 . P0ABB0 P0ABB0 1 1 2 2 1 L-Photo-Leucine 61 111 LEU PRO 1 . P0ABB0 P0ABB0 1 1 3 3 1 L-Photo-Leucine 482 120 # loop_ _ihm_cross_link_restraint.asym_id_1 _ihm_cross_link_restraint.asym_id_2 _ihm_cross_link_restraint.atom_id_1 _ihm_cross_link_restraint.atom_id_2 _ihm_cross_link_restraint.comp_id_1 _ihm_cross_link_restraint.comp_id_2 _ihm_cross_link_restraint.conditional_crosslink_flag _ihm_cross_link_restraint.distance_threshold _ihm_cross_link_restraint.entity_id_1 _ihm_cross_link_restraint.entity_id_2 _ihm_cross_link_restraint.group_id _ihm_cross_link_restraint.id _ihm_cross_link_restraint.model_granularity _ihm_cross_link_restraint.pseudo_site_flag _ihm_cross_link_restraint.psi _ihm_cross_link_restraint.restraint_type _ihm_cross_link_restraint.seq_id_1 _ihm_cross_link_restraint.seq_id_2 _ihm_cross_link_restraint.sigma_1 _ihm_cross_link_restraint.sigma_2 A A . . TYR LEU . 10 1 1 1 1 by-residue NO 0.05 "upper bound" 60 111 . . A A . . ALA LEU . 10 1 1 2 2 by-residue NO 0.05 "upper bound" 61 111 . . A A . . LEU PRO . 10 1 1 3 3 by-residue NO 0.05 "upper bound" 482 120 . . # _ihm_dataset_group.application . _ihm_dataset_group.details . _ihm_dataset_group.id 1 _ihm_dataset_group.name . # _ihm_dataset_group_link.dataset_list_id 1 _ihm_dataset_group_link.group_id 1 # _ihm_dataset_list.data_type "Crosslinking-MS data" _ihm_dataset_list.database_hosted YES _ihm_dataset_list.details . _ihm_dataset_list.id 1 # _ihm_dataset_related_db_reference.accession_code JPST001851 _ihm_dataset_related_db_reference.dataset_list_id 1 _ihm_dataset_related_db_reference.db_name jPOSTrepo _ihm_dataset_related_db_reference.details . _ihm_dataset_related_db_reference.id 1 _ihm_dataset_related_db_reference.version . # _ihm_entity_poly_segment.comp_id_begin MET _ihm_entity_poly_segment.comp_id_end TRP _ihm_entity_poly_segment.entity_id 1 _ihm_entity_poly_segment.id 1 _ihm_entity_poly_segment.seq_id_begin 1 _ihm_entity_poly_segment.seq_id_end 513 # _ihm_model_group.details . _ihm_model_group.id 1 _ihm_model_group.name . # loop_ _ihm_model_group_link.group_id _ihm_model_group_link.model_id 1 1 1 2 1 3 1 4 1 5 1 6 1 7 1 8 1 9 1 10 # loop_ _ihm_model_list.assembly_id _ihm_model_list.model_id _ihm_model_list.model_name _ihm_model_list.protocol_id _ihm_model_list.representation_id 1 1 . 1 1 1 2 . 1 1 1 3 . 1 1 1 4 . 1 1 1 5 . 1 1 1 6 . 1 1 1 7 . 1 1 1 8 . 1 1 1 9 . 1 1 1 10 . 1 1 # _ihm_model_representation.details . _ihm_model_representation.id 1 _ihm_model_representation.name . # _ihm_model_representation_details.description . _ihm_model_representation_details.entity_asym_id A _ihm_model_representation_details.entity_description P0ABB0 _ihm_model_representation_details.entity_id 1 _ihm_model_representation_details.entity_poly_segment_id 1 _ihm_model_representation_details.id 1 _ihm_model_representation_details.model_granularity by-atom _ihm_model_representation_details.model_mode flexible _ihm_model_representation_details.model_object_count . _ihm_model_representation_details.model_object_primitive atomistic _ihm_model_representation_details.representation_id 1 _ihm_model_representation_details.starting_model_id . # _ihm_modeling_protocol.details . _ihm_modeling_protocol.id 1 _ihm_modeling_protocol.num_steps 1 _ihm_modeling_protocol.protocol_name AlphaLink # _ihm_modeling_protocol_details.dataset_group_id 1 _ihm_modeling_protocol_details.description . _ihm_modeling_protocol_details.ensemble_flag YES _ihm_modeling_protocol_details.id 1 _ihm_modeling_protocol_details.multi_scale_flag NO _ihm_modeling_protocol_details.multi_state_flag NO _ihm_modeling_protocol_details.num_models_begin 0 _ihm_modeling_protocol_details.num_models_end 10 _ihm_modeling_protocol_details.ordered_flag NO _ihm_modeling_protocol_details.protocol_id 1 _ihm_modeling_protocol_details.script_file_id . _ihm_modeling_protocol_details.software_id . _ihm_modeling_protocol_details.step_id 1 _ihm_modeling_protocol_details.step_method "AlphaLink with 10 msa subsamples" _ihm_modeling_protocol_details.step_name AlphaLink _ihm_modeling_protocol_details.struct_assembly_description . _ihm_modeling_protocol_details.struct_assembly_id 1 # _ihm_struct_assembly.description "Integrative modeling using in-cell photo-crosslinking mass spectrometry and deep learning" _ihm_struct_assembly.id 1 _ihm_struct_assembly.name "Integrative model" # _ihm_struct_assembly_details.assembly_id 1 _ihm_struct_assembly_details.asym_id A _ihm_struct_assembly_details.entity_description P0ABB0 _ihm_struct_assembly_details.entity_id 1 _ihm_struct_assembly_details.entity_poly_segment_id 1 _ihm_struct_assembly_details.id 1 _ihm_struct_assembly_details.parent_assembly_id 1 # _software.citation_id 1 _software.classification "model building" _software.description "protein structure prediction by deep learning assisted by experimental distance restraints" _software.location https://github.com/lhatsk/AlphaLink _software.name AlphaLink _software.pdbx_ordinal 1 _software.type program _software.version 1.0 # _struct.entry_id 9A2R _struct.pdbx_CASP_flag . _struct.pdbx_descriptor . _struct.pdbx_details . _struct.pdbx_model_details . _struct.pdbx_model_type_details . _struct.title "Model of E. coli AtpA by in-cell photo-crosslinking MS and deep learning" _struct.pdbx_structure_determination_methodology integrative # _struct_asym.details P0ABB0 _struct_asym.entity_id 1 _struct_asym.id A _struct_asym.pdbx_PDB_id . _struct_asym.pdbx_alt_id . _struct_asym.pdbx_blank_PDB_chainid_flag . _struct_asym.pdbx_modified . _struct_asym.pdbx_order . _struct_asym.pdbx_type . # _struct_ref.db_code ATPA_ECOLI _struct_ref.db_name UNP _struct_ref.details "ATP synthase subunit alpha OS=Escherichia coli (strain K12) OX=83333 GN=atpA PE=1 SV=1" _struct_ref.entity_id 1 _struct_ref.id 1 _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_accession P0ABB0 _struct_ref.pdbx_seq_one_letter_code MQLNSTEISELIKQRIAQFNVVSEAHNEGTIVSVSDGVIRIHGLADCMQGEMISLPGNRYAIALNLERDSVGAVVMGPYADLAEGMKVKCTGRILEVPVGRGLLGRVVNTLGAPIDGKGPLDHDGFSAVEAIAPGVIERQSVDQPVQTGYKAVDSMIPIGRGQRELIIGDRQTGKTALAIDAIINQRDSGIKCIYVAIGQKASTISNVVRKLEEHGALANTIVVVATASESAALQYLAPYAGCAMGEYFRDRGEDALIIYDDLSKQAVAYRQISLLLRRPPGREAFPGDVFYLHSRLLERAARVNAEYVEAFTKGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLETNLFNAGIRPAVNPGISVSRVGGAAQTKIMKKLSGGIRTALAQYRELAAFSQFASDLDDATRKQLDHGQKVTELLKQKQYAPMSVAQQSLVLFAAERGYLADVELSKIGSFEAALLAYVDRDHAPLMQEINQTGGYNDEIEGKLKGILDSFKATQSW # _struct_ref_seq.align_id 1 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.db_align_end 513 _struct_ref_seq.ref_id 1 _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.seq_align_end 513 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code A 1 1 MET 1 1 MET MET A . A 1 2 GLN 2 2 GLN GLN A . A 1 3 LEU 3 3 LEU LEU A . A 1 4 ASN 4 4 ASN ASN A . A 1 5 SER 5 5 SER SER A . A 1 6 THR 6 6 THR THR A . A 1 7 GLU 7 7 GLU GLU A . A 1 8 ILE 8 8 ILE ILE A . A 1 9 SER 9 9 SER SER A . A 1 10 GLU 10 10 GLU GLU A . A 1 11 LEU 11 11 LEU LEU A . A 1 12 ILE 12 12 ILE ILE A . A 1 13 LYS 13 13 LYS LYS A . A 1 14 GLN 14 14 GLN GLN A . A 1 15 ARG 15 15 ARG ARG A . A 1 16 ILE 16 16 ILE ILE A . A 1 17 ALA 17 17 ALA ALA A . A 1 18 GLN 18 18 GLN GLN A . A 1 19 PHE 19 19 PHE PHE A . A 1 20 ASN 20 20 ASN ASN A . A 1 21 VAL 21 21 VAL VAL A . A 1 22 VAL 22 22 VAL VAL A . A 1 23 SER 23 23 SER SER A . A 1 24 GLU 24 24 GLU GLU A . A 1 25 ALA 25 25 ALA ALA A . A 1 26 HIS 26 26 HIS HIS A . A 1 27 ASN 27 27 ASN ASN A . A 1 28 GLU 28 28 GLU GLU A . A 1 29 GLY 29 29 GLY GLY A . A 1 30 THR 30 30 THR THR A . A 1 31 ILE 31 31 ILE ILE A . A 1 32 VAL 32 32 VAL VAL A . A 1 33 SER 33 33 SER SER A . A 1 34 VAL 34 34 VAL VAL A . A 1 35 SER 35 35 SER SER A . A 1 36 ASP 36 36 ASP ASP A . A 1 37 GLY 37 37 GLY GLY A . A 1 38 VAL 38 38 VAL VAL A . A 1 39 ILE 39 39 ILE ILE A . A 1 40 ARG 40 40 ARG ARG A . A 1 41 ILE 41 41 ILE ILE A . A 1 42 HIS 42 42 HIS HIS A . A 1 43 GLY 43 43 GLY GLY A . A 1 44 LEU 44 44 LEU LEU A . A 1 45 ALA 45 45 ALA ALA A . A 1 46 ASP 46 46 ASP ASP A . A 1 47 CYS 47 47 CYS CYS A . A 1 48 MET 48 48 MET MET A . A 1 49 GLN 49 49 GLN GLN A . A 1 50 GLY 50 50 GLY GLY A . A 1 51 GLU 51 51 GLU GLU A . A 1 52 MET 52 52 MET MET A . A 1 53 ILE 53 53 ILE ILE A . A 1 54 SER 54 54 SER SER A . A 1 55 LEU 55 55 LEU LEU A . A 1 56 PRO 56 56 PRO PRO A . A 1 57 GLY 57 57 GLY GLY A . A 1 58 ASN 58 58 ASN ASN A . A 1 59 ARG 59 59 ARG ARG A . A 1 60 TYR 60 60 TYR TYR A . A 1 61 ALA 61 61 ALA ALA A . A 1 62 ILE 62 62 ILE ILE A . A 1 63 ALA 63 63 ALA ALA A . A 1 64 LEU 64 64 LEU LEU A . A 1 65 ASN 65 65 ASN ASN A . A 1 66 LEU 66 66 LEU LEU A . A 1 67 GLU 67 67 GLU GLU A . A 1 68 ARG 68 68 ARG ARG A . A 1 69 ASP 69 69 ASP ASP A . A 1 70 SER 70 70 SER SER A . A 1 71 VAL 71 71 VAL VAL A . A 1 72 GLY 72 72 GLY GLY A . A 1 73 ALA 73 73 ALA ALA A . A 1 74 VAL 74 74 VAL VAL A . A 1 75 VAL 75 75 VAL VAL A . A 1 76 MET 76 76 MET MET A . A 1 77 GLY 77 77 GLY GLY A . A 1 78 PRO 78 78 PRO PRO A . A 1 79 TYR 79 79 TYR TYR A . A 1 80 ALA 80 80 ALA ALA A . A 1 81 ASP 81 81 ASP ASP A . A 1 82 LEU 82 82 LEU LEU A . A 1 83 ALA 83 83 ALA ALA A . A 1 84 GLU 84 84 GLU GLU A . A 1 85 GLY 85 85 GLY GLY A . A 1 86 MET 86 86 MET MET A . A 1 87 LYS 87 87 LYS LYS A . A 1 88 VAL 88 88 VAL VAL A . A 1 89 LYS 89 89 LYS LYS A . A 1 90 CYS 90 90 CYS CYS A . A 1 91 THR 91 91 THR THR A . A 1 92 GLY 92 92 GLY GLY A . A 1 93 ARG 93 93 ARG ARG A . A 1 94 ILE 94 94 ILE ILE A . A 1 95 LEU 95 95 LEU LEU A . A 1 96 GLU 96 96 GLU GLU A . A 1 97 VAL 97 97 VAL VAL A . A 1 98 PRO 98 98 PRO PRO A . A 1 99 VAL 99 99 VAL VAL A . A 1 100 GLY 100 100 GLY GLY A . A 1 101 ARG 101 101 ARG ARG A . A 1 102 GLY 102 102 GLY GLY A . A 1 103 LEU 103 103 LEU LEU A . A 1 104 LEU 104 104 LEU LEU A . A 1 105 GLY 105 105 GLY GLY A . A 1 106 ARG 106 106 ARG ARG A . A 1 107 VAL 107 107 VAL VAL A . A 1 108 VAL 108 108 VAL VAL A . A 1 109 ASN 109 109 ASN ASN A . A 1 110 THR 110 110 THR THR A . A 1 111 LEU 111 111 LEU LEU A . A 1 112 GLY 112 112 GLY GLY A . A 1 113 ALA 113 113 ALA ALA A . A 1 114 PRO 114 114 PRO PRO A . A 1 115 ILE 115 115 ILE ILE A . A 1 116 ASP 116 116 ASP ASP A . A 1 117 GLY 117 117 GLY GLY A . A 1 118 LYS 118 118 LYS LYS A . A 1 119 GLY 119 119 GLY GLY A . A 1 120 PRO 120 120 PRO PRO A . A 1 121 LEU 121 121 LEU LEU A . A 1 122 ASP 122 122 ASP ASP A . A 1 123 HIS 123 123 HIS HIS A . A 1 124 ASP 124 124 ASP ASP A . A 1 125 GLY 125 125 GLY GLY A . A 1 126 PHE 126 126 PHE PHE A . A 1 127 SER 127 127 SER SER A . A 1 128 ALA 128 128 ALA ALA A . A 1 129 VAL 129 129 VAL VAL A . A 1 130 GLU 130 130 GLU GLU A . A 1 131 ALA 131 131 ALA ALA A . A 1 132 ILE 132 132 ILE ILE A . A 1 133 ALA 133 133 ALA ALA A . A 1 134 PRO 134 134 PRO PRO A . A 1 135 GLY 135 135 GLY GLY A . A 1 136 VAL 136 136 VAL VAL A . A 1 137 ILE 137 137 ILE ILE A . A 1 138 GLU 138 138 GLU GLU A . A 1 139 ARG 139 139 ARG ARG A . A 1 140 GLN 140 140 GLN GLN A . A 1 141 SER 141 141 SER SER A . A 1 142 VAL 142 142 VAL VAL A . A 1 143 ASP 143 143 ASP ASP A . A 1 144 GLN 144 144 GLN GLN A . A 1 145 PRO 145 145 PRO PRO A . A 1 146 VAL 146 146 VAL VAL A . A 1 147 GLN 147 147 GLN GLN A . A 1 148 THR 148 148 THR THR A . A 1 149 GLY 149 149 GLY GLY A . A 1 150 TYR 150 150 TYR TYR A . A 1 151 LYS 151 151 LYS LYS A . A 1 152 ALA 152 152 ALA ALA A . A 1 153 VAL 153 153 VAL VAL A . A 1 154 ASP 154 154 ASP ASP A . A 1 155 SER 155 155 SER SER A . A 1 156 MET 156 156 MET MET A . A 1 157 ILE 157 157 ILE ILE A . A 1 158 PRO 158 158 PRO PRO A . A 1 159 ILE 159 159 ILE ILE A . A 1 160 GLY 160 160 GLY GLY A . A 1 161 ARG 161 161 ARG ARG A . A 1 162 GLY 162 162 GLY GLY A . A 1 163 GLN 163 163 GLN GLN A . A 1 164 ARG 164 164 ARG ARG A . A 1 165 GLU 165 165 GLU GLU A . A 1 166 LEU 166 166 LEU LEU A . A 1 167 ILE 167 167 ILE ILE A . A 1 168 ILE 168 168 ILE ILE A . A 1 169 GLY 169 169 GLY GLY A . A 1 170 ASP 170 170 ASP ASP A . A 1 171 ARG 171 171 ARG ARG A . A 1 172 GLN 172 172 GLN GLN A . A 1 173 THR 173 173 THR THR A . A 1 174 GLY 174 174 GLY GLY A . A 1 175 LYS 175 175 LYS LYS A . A 1 176 THR 176 176 THR THR A . A 1 177 ALA 177 177 ALA ALA A . A 1 178 LEU 178 178 LEU LEU A . A 1 179 ALA 179 179 ALA ALA A . A 1 180 ILE 180 180 ILE ILE A . A 1 181 ASP 181 181 ASP ASP A . A 1 182 ALA 182 182 ALA ALA A . A 1 183 ILE 183 183 ILE ILE A . A 1 184 ILE 184 184 ILE ILE A . A 1 185 ASN 185 185 ASN ASN A . A 1 186 GLN 186 186 GLN GLN A . A 1 187 ARG 187 187 ARG ARG A . A 1 188 ASP 188 188 ASP ASP A . A 1 189 SER 189 189 SER SER A . A 1 190 GLY 190 190 GLY GLY A . A 1 191 ILE 191 191 ILE ILE A . A 1 192 LYS 192 192 LYS LYS A . A 1 193 CYS 193 193 CYS CYS A . A 1 194 ILE 194 194 ILE ILE A . A 1 195 TYR 195 195 TYR TYR A . A 1 196 VAL 196 196 VAL VAL A . A 1 197 ALA 197 197 ALA ALA A . A 1 198 ILE 198 198 ILE ILE A . A 1 199 GLY 199 199 GLY GLY A . A 1 200 GLN 200 200 GLN GLN A . A 1 201 LYS 201 201 LYS LYS A . A 1 202 ALA 202 202 ALA ALA A . A 1 203 SER 203 203 SER SER A . A 1 204 THR 204 204 THR THR A . A 1 205 ILE 205 205 ILE ILE A . A 1 206 SER 206 206 SER SER A . A 1 207 ASN 207 207 ASN ASN A . A 1 208 VAL 208 208 VAL VAL A . A 1 209 VAL 209 209 VAL VAL A . A 1 210 ARG 210 210 ARG ARG A . A 1 211 LYS 211 211 LYS LYS A . A 1 212 LEU 212 212 LEU LEU A . A 1 213 GLU 213 213 GLU GLU A . A 1 214 GLU 214 214 GLU GLU A . A 1 215 HIS 215 215 HIS HIS A . A 1 216 GLY 216 216 GLY GLY A . A 1 217 ALA 217 217 ALA ALA A . A 1 218 LEU 218 218 LEU LEU A . A 1 219 ALA 219 219 ALA ALA A . A 1 220 ASN 220 220 ASN ASN A . A 1 221 THR 221 221 THR THR A . A 1 222 ILE 222 222 ILE ILE A . A 1 223 VAL 223 223 VAL VAL A . A 1 224 VAL 224 224 VAL VAL A . A 1 225 VAL 225 225 VAL VAL A . A 1 226 ALA 226 226 ALA ALA A . A 1 227 THR 227 227 THR THR A . A 1 228 ALA 228 228 ALA ALA A . A 1 229 SER 229 229 SER SER A . A 1 230 GLU 230 230 GLU GLU A . A 1 231 SER 231 231 SER SER A . A 1 232 ALA 232 232 ALA ALA A . A 1 233 ALA 233 233 ALA ALA A . A 1 234 LEU 234 234 LEU LEU A . A 1 235 GLN 235 235 GLN GLN A . A 1 236 TYR 236 236 TYR TYR A . A 1 237 LEU 237 237 LEU LEU A . A 1 238 ALA 238 238 ALA ALA A . A 1 239 PRO 239 239 PRO PRO A . A 1 240 TYR 240 240 TYR TYR A . A 1 241 ALA 241 241 ALA ALA A . A 1 242 GLY 242 242 GLY GLY A . A 1 243 CYS 243 243 CYS CYS A . A 1 244 ALA 244 244 ALA ALA A . A 1 245 MET 245 245 MET MET A . A 1 246 GLY 246 246 GLY GLY A . A 1 247 GLU 247 247 GLU GLU A . A 1 248 TYR 248 248 TYR TYR A . A 1 249 PHE 249 249 PHE PHE A . A 1 250 ARG 250 250 ARG ARG A . A 1 251 ASP 251 251 ASP ASP A . A 1 252 ARG 252 252 ARG ARG A . A 1 253 GLY 253 253 GLY GLY A . A 1 254 GLU 254 254 GLU GLU A . A 1 255 ASP 255 255 ASP ASP A . A 1 256 ALA 256 256 ALA ALA A . A 1 257 LEU 257 257 LEU LEU A . A 1 258 ILE 258 258 ILE ILE A . A 1 259 ILE 259 259 ILE ILE A . A 1 260 TYR 260 260 TYR TYR A . A 1 261 ASP 261 261 ASP ASP A . A 1 262 ASP 262 262 ASP ASP A . A 1 263 LEU 263 263 LEU LEU A . A 1 264 SER 264 264 SER SER A . A 1 265 LYS 265 265 LYS LYS A . A 1 266 GLN 266 266 GLN GLN A . A 1 267 ALA 267 267 ALA ALA A . A 1 268 VAL 268 268 VAL VAL A . A 1 269 ALA 269 269 ALA ALA A . A 1 270 TYR 270 270 TYR TYR A . A 1 271 ARG 271 271 ARG ARG A . A 1 272 GLN 272 272 GLN GLN A . A 1 273 ILE 273 273 ILE ILE A . A 1 274 SER 274 274 SER SER A . A 1 275 LEU 275 275 LEU LEU A . A 1 276 LEU 276 276 LEU LEU A . A 1 277 LEU 277 277 LEU LEU A . A 1 278 ARG 278 278 ARG ARG A . A 1 279 ARG 279 279 ARG ARG A . A 1 280 PRO 280 280 PRO PRO A . A 1 281 PRO 281 281 PRO PRO A . A 1 282 GLY 282 282 GLY GLY A . A 1 283 ARG 283 283 ARG ARG A . A 1 284 GLU 284 284 GLU GLU A . A 1 285 ALA 285 285 ALA ALA A . A 1 286 PHE 286 286 PHE PHE A . A 1 287 PRO 287 287 PRO PRO A . A 1 288 GLY 288 288 GLY GLY A . A 1 289 ASP 289 289 ASP ASP A . A 1 290 VAL 290 290 VAL VAL A . A 1 291 PHE 291 291 PHE PHE A . A 1 292 TYR 292 292 TYR TYR A . A 1 293 LEU 293 293 LEU LEU A . A 1 294 HIS 294 294 HIS HIS A . A 1 295 SER 295 295 SER SER A . A 1 296 ARG 296 296 ARG ARG A . A 1 297 LEU 297 297 LEU LEU A . A 1 298 LEU 298 298 LEU LEU A . A 1 299 GLU 299 299 GLU GLU A . A 1 300 ARG 300 300 ARG ARG A . A 1 301 ALA 301 301 ALA ALA A . A 1 302 ALA 302 302 ALA ALA A . A 1 303 ARG 303 303 ARG ARG A . A 1 304 VAL 304 304 VAL VAL A . A 1 305 ASN 305 305 ASN ASN A . A 1 306 ALA 306 306 ALA ALA A . A 1 307 GLU 307 307 GLU GLU A . A 1 308 TYR 308 308 TYR TYR A . A 1 309 VAL 309 309 VAL VAL A . A 1 310 GLU 310 310 GLU GLU A . A 1 311 ALA 311 311 ALA ALA A . A 1 312 PHE 312 312 PHE PHE A . A 1 313 THR 313 313 THR THR A . A 1 314 LYS 314 314 LYS LYS A . A 1 315 GLY 315 315 GLY GLY A . A 1 316 GLU 316 316 GLU GLU A . A 1 317 VAL 317 317 VAL VAL A . A 1 318 LYS 318 318 LYS LYS A . A 1 319 GLY 319 319 GLY GLY A . A 1 320 LYS 320 320 LYS LYS A . A 1 321 THR 321 321 THR THR A . A 1 322 GLY 322 322 GLY GLY A . A 1 323 SER 323 323 SER SER A . A 1 324 LEU 324 324 LEU LEU A . A 1 325 THR 325 325 THR THR A . A 1 326 ALA 326 326 ALA ALA A . A 1 327 LEU 327 327 LEU LEU A . A 1 328 PRO 328 328 PRO PRO A . A 1 329 ILE 329 329 ILE ILE A . A 1 330 ILE 330 330 ILE ILE A . A 1 331 GLU 331 331 GLU GLU A . A 1 332 THR 332 332 THR THR A . A 1 333 GLN 333 333 GLN GLN A . A 1 334 ALA 334 334 ALA ALA A . A 1 335 GLY 335 335 GLY GLY A . A 1 336 ASP 336 336 ASP ASP A . A 1 337 VAL 337 337 VAL VAL A . A 1 338 SER 338 338 SER SER A . A 1 339 ALA 339 339 ALA ALA A . A 1 340 PHE 340 340 PHE PHE A . A 1 341 VAL 341 341 VAL VAL A . A 1 342 PRO 342 342 PRO PRO A . A 1 343 THR 343 343 THR THR A . A 1 344 ASN 344 344 ASN ASN A . A 1 345 VAL 345 345 VAL VAL A . A 1 346 ILE 346 346 ILE ILE A . A 1 347 SER 347 347 SER SER A . A 1 348 ILE 348 348 ILE ILE A . A 1 349 THR 349 349 THR THR A . A 1 350 ASP 350 350 ASP ASP A . A 1 351 GLY 351 351 GLY GLY A . A 1 352 GLN 352 352 GLN GLN A . A 1 353 ILE 353 353 ILE ILE A . A 1 354 PHE 354 354 PHE PHE A . A 1 355 LEU 355 355 LEU LEU A . A 1 356 GLU 356 356 GLU GLU A . A 1 357 THR 357 357 THR THR A . A 1 358 ASN 358 358 ASN ASN A . A 1 359 LEU 359 359 LEU LEU A . A 1 360 PHE 360 360 PHE PHE A . A 1 361 ASN 361 361 ASN ASN A . A 1 362 ALA 362 362 ALA ALA A . A 1 363 GLY 363 363 GLY GLY A . A 1 364 ILE 364 364 ILE ILE A . A 1 365 ARG 365 365 ARG ARG A . A 1 366 PRO 366 366 PRO PRO A . A 1 367 ALA 367 367 ALA ALA A . A 1 368 VAL 368 368 VAL VAL A . A 1 369 ASN 369 369 ASN ASN A . A 1 370 PRO 370 370 PRO PRO A . A 1 371 GLY 371 371 GLY GLY A . A 1 372 ILE 372 372 ILE ILE A . A 1 373 SER 373 373 SER SER A . A 1 374 VAL 374 374 VAL VAL A . A 1 375 SER 375 375 SER SER A . A 1 376 ARG 376 376 ARG ARG A . A 1 377 VAL 377 377 VAL VAL A . A 1 378 GLY 378 378 GLY GLY A . A 1 379 GLY 379 379 GLY GLY A . A 1 380 ALA 380 380 ALA ALA A . A 1 381 ALA 381 381 ALA ALA A . A 1 382 GLN 382 382 GLN GLN A . A 1 383 THR 383 383 THR THR A . A 1 384 LYS 384 384 LYS LYS A . A 1 385 ILE 385 385 ILE ILE A . A 1 386 MET 386 386 MET MET A . A 1 387 LYS 387 387 LYS LYS A . A 1 388 LYS 388 388 LYS LYS A . A 1 389 LEU 389 389 LEU LEU A . A 1 390 SER 390 390 SER SER A . A 1 391 GLY 391 391 GLY GLY A . A 1 392 GLY 392 392 GLY GLY A . A 1 393 ILE 393 393 ILE ILE A . A 1 394 ARG 394 394 ARG ARG A . A 1 395 THR 395 395 THR THR A . A 1 396 ALA 396 396 ALA ALA A . A 1 397 LEU 397 397 LEU LEU A . A 1 398 ALA 398 398 ALA ALA A . A 1 399 GLN 399 399 GLN GLN A . A 1 400 TYR 400 400 TYR TYR A . A 1 401 ARG 401 401 ARG ARG A . A 1 402 GLU 402 402 GLU GLU A . A 1 403 LEU 403 403 LEU LEU A . A 1 404 ALA 404 404 ALA ALA A . A 1 405 ALA 405 405 ALA ALA A . A 1 406 PHE 406 406 PHE PHE A . A 1 407 SER 407 407 SER SER A . A 1 408 GLN 408 408 GLN GLN A . A 1 409 PHE 409 409 PHE PHE A . A 1 410 ALA 410 410 ALA ALA A . A 1 411 SER 411 411 SER SER A . A 1 412 ASP 412 412 ASP ASP A . A 1 413 LEU 413 413 LEU LEU A . A 1 414 ASP 414 414 ASP ASP A . A 1 415 ASP 415 415 ASP ASP A . A 1 416 ALA 416 416 ALA ALA A . A 1 417 THR 417 417 THR THR A . A 1 418 ARG 418 418 ARG ARG A . A 1 419 LYS 419 419 LYS LYS A . A 1 420 GLN 420 420 GLN GLN A . A 1 421 LEU 421 421 LEU LEU A . A 1 422 ASP 422 422 ASP ASP A . A 1 423 HIS 423 423 HIS HIS A . A 1 424 GLY 424 424 GLY GLY A . A 1 425 GLN 425 425 GLN GLN A . A 1 426 LYS 426 426 LYS LYS A . A 1 427 VAL 427 427 VAL VAL A . A 1 428 THR 428 428 THR THR A . A 1 429 GLU 429 429 GLU GLU A . A 1 430 LEU 430 430 LEU LEU A . A 1 431 LEU 431 431 LEU LEU A . A 1 432 LYS 432 432 LYS LYS A . A 1 433 GLN 433 433 GLN GLN A . A 1 434 LYS 434 434 LYS LYS A . A 1 435 GLN 435 435 GLN GLN A . A 1 436 TYR 436 436 TYR TYR A . A 1 437 ALA 437 437 ALA ALA A . A 1 438 PRO 438 438 PRO PRO A . A 1 439 MET 439 439 MET MET A . A 1 440 SER 440 440 SER SER A . A 1 441 VAL 441 441 VAL VAL A . A 1 442 ALA 442 442 ALA ALA A . A 1 443 GLN 443 443 GLN GLN A . A 1 444 GLN 444 444 GLN GLN A . A 1 445 SER 445 445 SER SER A . A 1 446 LEU 446 446 LEU LEU A . A 1 447 VAL 447 447 VAL VAL A . A 1 448 LEU 448 448 LEU LEU A . A 1 449 PHE 449 449 PHE PHE A . A 1 450 ALA 450 450 ALA ALA A . A 1 451 ALA 451 451 ALA ALA A . A 1 452 GLU 452 452 GLU GLU A . A 1 453 ARG 453 453 ARG ARG A . A 1 454 GLY 454 454 GLY GLY A . A 1 455 TYR 455 455 TYR TYR A . A 1 456 LEU 456 456 LEU LEU A . A 1 457 ALA 457 457 ALA ALA A . A 1 458 ASP 458 458 ASP ASP A . A 1 459 VAL 459 459 VAL VAL A . A 1 460 GLU 460 460 GLU GLU A . A 1 461 LEU 461 461 LEU LEU A . A 1 462 SER 462 462 SER SER A . A 1 463 LYS 463 463 LYS LYS A . A 1 464 ILE 464 464 ILE ILE A . A 1 465 GLY 465 465 GLY GLY A . A 1 466 SER 466 466 SER SER A . A 1 467 PHE 467 467 PHE PHE A . A 1 468 GLU 468 468 GLU GLU A . A 1 469 ALA 469 469 ALA ALA A . A 1 470 ALA 470 470 ALA ALA A . A 1 471 LEU 471 471 LEU LEU A . A 1 472 LEU 472 472 LEU LEU A . A 1 473 ALA 473 473 ALA ALA A . A 1 474 TYR 474 474 TYR TYR A . A 1 475 VAL 475 475 VAL VAL A . A 1 476 ASP 476 476 ASP ASP A . A 1 477 ARG 477 477 ARG ARG A . A 1 478 ASP 478 478 ASP ASP A . A 1 479 HIS 479 479 HIS HIS A . A 1 480 ALA 480 480 ALA ALA A . A 1 481 PRO 481 481 PRO PRO A . A 1 482 LEU 482 482 LEU LEU A . A 1 483 MET 483 483 MET MET A . A 1 484 GLN 484 484 GLN GLN A . A 1 485 GLU 485 485 GLU GLU A . A 1 486 ILE 486 486 ILE ILE A . A 1 487 ASN 487 487 ASN ASN A . A 1 488 GLN 488 488 GLN GLN A . A 1 489 THR 489 489 THR THR A . A 1 490 GLY 490 490 GLY GLY A . A 1 491 GLY 491 491 GLY GLY A . A 1 492 TYR 492 492 TYR TYR A . A 1 493 ASN 493 493 ASN ASN A . A 1 494 ASP 494 494 ASP ASP A . A 1 495 GLU 495 495 GLU GLU A . A 1 496 ILE 496 496 ILE ILE A . A 1 497 GLU 497 497 GLU GLU A . A 1 498 GLY 498 498 GLY GLY A . A 1 499 LYS 499 499 LYS LYS A . A 1 500 LEU 500 500 LEU LEU A . A 1 501 LYS 501 501 LYS LYS A . A 1 502 GLY 502 502 GLY GLY A . A 1 503 ILE 503 503 ILE ILE A . A 1 504 LEU 504 504 LEU LEU A . A 1 505 ASP 505 505 ASP ASP A . A 1 506 SER 506 506 SER SER A . A 1 507 PHE 507 507 PHE PHE A . A 1 508 LYS 508 508 LYS LYS A . A 1 509 ALA 509 509 ALA ALA A . A 1 510 THR 510 510 THR THR A . A 1 511 GLN 511 511 GLN GLN A . A 1 512 SER 512 512 SER SER A . A 1 513 TRP 513 513 TRP TRP A . # # loop_ # #