data_9A2X # _entry.id 9A2X # loop_ _atom_type.symbol C H N O S # loop_ _audit_author.name _audit_author.pdbx_ordinal "Stahl, K." 1 "Graziadei, A." 2 "Dau, T." 3 "Brock, O." 4 "Rappsilber, J." 5 # loop_ _audit_conform.dict_location _audit_conform.dict_name _audit_conform.dict_version https://mmcif.wwpdb.org/dictionaries/ascii/mmcif_ihm_ext.dic mmcif_ihm_ext.dic 1.26 http://mmcif.wwpdb.org/dictionaries/ascii/mmcif_pdbx_v50.dic mmcif_pdbx.dic 5.395 # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB-Dev PDBDEV_00000182 PDBDEV_00000182 ? PDB 9A2X pdb_00009a2x 10.2210/pdb9a2x/pdb # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 9A2X _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2023-02-03 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2023-02-24 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # _ihm_entry_collection.id PDBDEV_G_1000001 _ihm_entry_collection.name . _ihm_entry_collection.details 'Collection of entries belonging to the publication: "Protein structure prediction with in-cell photo-crosslinking mass spectrometry and deep learning"' # _ihm_entry_collection_mapping.collection_id PDBDEV_G_1000001 _ihm_entry_collection_mapping.entry_id 9A2X # loop_ _chem_comp.formula _chem_comp.formula_weight _chem_comp.id _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.type "C3 H7 N O2" 89.094 ALA . ALANINE . "L-peptide linking" "C6 H15 N4 O2 1" 175.212 ARG . ARGININE . "L-peptide linking" "C4 H8 N2 O3" 132.119 ASN . ASPARAGINE . "L-peptide linking" "C4 H7 N O4" 133.103 ASP . "ASPARTIC ACID" . "L-peptide linking" "C5 H10 N2 O3" 146.146 GLN . GLUTAMINE . "L-peptide linking" "C5 H9 N O4" 147.13 GLU . "GLUTAMIC ACID" . "L-peptide linking" "C2 H5 N O2" 75.067 GLY . GLYCINE . "peptide linking" "C6 H10 N3 O2 1" 156.165 HIS . HISTIDINE . "L-peptide linking" "C6 H13 N O2" 131.175 ILE . ISOLEUCINE . "L-peptide linking" "C6 H13 N O2" 131.175 LEU . LEUCINE . "L-peptide linking" "C6 H15 N2 O2 1" 147.198 LYS . LYSINE . "L-peptide linking" "C5 H11 N O2 S" 149.208 MET . METHIONINE . "L-peptide linking" "C9 H11 N O2" 165.192 PHE . PHENYLALANINE . "L-peptide linking" "C5 H9 N O2" 115.132 PRO . PROLINE . "L-peptide linking" "C3 H7 N O3" 105.093 SER . SERINE . "L-peptide linking" "C4 H9 N O3" 119.12 THR . THREONINE . "L-peptide linking" "C11 H12 N2 O2" 204.229 TRP . TRYPTOPHAN . "L-peptide linking" "C9 H11 N O3" 181.191 TYR . TYROSINE . "L-peptide linking" "C5 H11 N O2" 117.148 VAL . VALINE . "L-peptide linking" # _citation.country . _citation.id 1 _citation.journal_abbrev "Nature Biotechnology" _citation.journal_id_ASTM . _citation.journal_id_CSD . _citation.journal_id_ISSN . _citation.journal_issue . _citation.journal_volume . _citation.page_first . _citation.page_last . _citation.pdbx_database_id_DOI 10.1038/s41587-023-01704-z _citation.pdbx_database_id_PubMed 36941363 _citation.title "Protein structure prediction with in-cell photo-crosslinking mass spectrometry and deep learning" _citation.year 2023 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal 1 "Stahl, K." 1 1 "Graziadei, A." 2 1 "Dau, T." 3 1 "Brock, O." 4 1 "Rappsilber, J." 5 # _entity.details . _entity.formula_weight 62647.562 _entity.id 1 _entity.pdbx_description P02930 _entity.pdbx_number_of_molecules 1 _entity.src_method NAT _entity.type polymer # _entity_poly.entity_id 1 _entity_poly.nstd_chirality . _entity_poly.nstd_linkage NO _entity_poly.nstd_monomer NO _entity_poly.pdbx_seq_one_letter_code MKKLLPILIGLSLSGFSSLSQAENLMQVYQQARLSNPELRKSAADRDAAFEKINEARSPLLPQLGLGADYTYSNGYRDANGINSNATSASLQLTQSIFDMSKWRALTLQEKAAGIQDVTYQTDQQTLILNTATAYFNVLNAIDVLSYTQAQKEAIYRQLDQTTQRFNVGLVAITDVQNARAQYDTVLANEVTARNNLDNAVEQLRQITGNYYPELAALNVENFKTDKPQPVNALLKEAEKRNLSLLQARLSQDLAREQIRQAQDGHLPTLDLTASTGISDTSYSGSKTRGAAGTQYDDSNMGQNKVGLSFSLPIYQGGMVNSQVKQAQYNFVGASEQLESAHRSVVQTVRSSFNNINASISSINAYKQAVVSAQSSLDAMEAGYSVGTRTIVDVLDATTTLYNAKQELANARYNYLINQLNIKSALGTLNEQDLLALNNALSKPVSTNPENVAPQTPEQNAIADGYAPDSPAPVVQQTSARTTTSNGHNPFRN _entity_poly.pdbx_seq_one_letter_code_can MKKLLPILIGLSLSGFSSLSQAENLMQVYQQARLSNPELRKSAADRDAAFEKINEARSPLLPQLGLGADYTYSNGYRDANGINSNATSASLQLTQSIFDMSKWRALTLQEKAAGIQDVTYQTDQQTLILNTATAYFNVLNAIDVLSYTQAQKEAIYRQLDQTTQRFNVGLVAITDVQNARAQYDTVLANEVTARNNLDNAVEQLRQITGNYYPELAALNVENFKTDKPQPVNALLKEAEKRNLSLLQARLSQDLAREQIRQAQDGHLPTLDLTASTGISDTSYSGSKTRGAAGTQYDDSNMGQNKVGLSFSLPIYQGGMVNSQVKQAQYNFVGASEQLESAHRSVVQTVRSSFNNINASISSINAYKQAVVSAQSSLDAMEAGYSVGTRTIVDVLDATTTLYNAKQELANARYNYLINQLNIKSALGTLNEQDLLALNNALSKPVSTNPENVAPQTPEQNAIADGYAPDSPAPVVQQTSARTTTSNGHNPFRN _entity_poly.pdbx_sequence_evidence_code . _entity_poly.pdbx_strand_id A _entity_poly.type polypeptide(L) # loop_ _entity_poly_seq.entity_id _entity_poly_seq.hetero _entity_poly_seq.mon_id _entity_poly_seq.num 1 . MET 1 1 . LYS 2 1 . LYS 3 1 . LEU 4 1 . LEU 5 1 . PRO 6 1 . ILE 7 1 . LEU 8 1 . ILE 9 1 . GLY 10 1 . LEU 11 1 . SER 12 1 . LEU 13 1 . SER 14 1 . GLY 15 1 . PHE 16 1 . SER 17 1 . SER 18 1 . LEU 19 1 . SER 20 1 . GLN 21 1 . ALA 22 1 . GLU 23 1 . ASN 24 1 . LEU 25 1 . MET 26 1 . GLN 27 1 . VAL 28 1 . TYR 29 1 . GLN 30 1 . GLN 31 1 . ALA 32 1 . ARG 33 1 . LEU 34 1 . SER 35 1 . ASN 36 1 . PRO 37 1 . GLU 38 1 . LEU 39 1 . ARG 40 1 . LYS 41 1 . SER 42 1 . ALA 43 1 . ALA 44 1 . ASP 45 1 . ARG 46 1 . ASP 47 1 . ALA 48 1 . ALA 49 1 . PHE 50 1 . GLU 51 1 . LYS 52 1 . ILE 53 1 . ASN 54 1 . GLU 55 1 . ALA 56 1 . ARG 57 1 . SER 58 1 . PRO 59 1 . LEU 60 1 . LEU 61 1 . PRO 62 1 . GLN 63 1 . LEU 64 1 . GLY 65 1 . LEU 66 1 . GLY 67 1 . ALA 68 1 . ASP 69 1 . TYR 70 1 . THR 71 1 . TYR 72 1 . SER 73 1 . ASN 74 1 . GLY 75 1 . TYR 76 1 . ARG 77 1 . ASP 78 1 . ALA 79 1 . ASN 80 1 . GLY 81 1 . ILE 82 1 . ASN 83 1 . SER 84 1 . ASN 85 1 . ALA 86 1 . THR 87 1 . SER 88 1 . ALA 89 1 . SER 90 1 . LEU 91 1 . GLN 92 1 . LEU 93 1 . THR 94 1 . GLN 95 1 . SER 96 1 . ILE 97 1 . PHE 98 1 . ASP 99 1 . MET 100 1 . SER 101 1 . LYS 102 1 . TRP 103 1 . ARG 104 1 . ALA 105 1 . LEU 106 1 . THR 107 1 . LEU 108 1 . GLN 109 1 . GLU 110 1 . LYS 111 1 . ALA 112 1 . ALA 113 1 . GLY 114 1 . ILE 115 1 . GLN 116 1 . ASP 117 1 . VAL 118 1 . THR 119 1 . TYR 120 1 . GLN 121 1 . THR 122 1 . ASP 123 1 . GLN 124 1 . GLN 125 1 . THR 126 1 . LEU 127 1 . ILE 128 1 . LEU 129 1 . ASN 130 1 . THR 131 1 . ALA 132 1 . THR 133 1 . ALA 134 1 . TYR 135 1 . PHE 136 1 . ASN 137 1 . VAL 138 1 . LEU 139 1 . ASN 140 1 . ALA 141 1 . ILE 142 1 . ASP 143 1 . VAL 144 1 . LEU 145 1 . SER 146 1 . TYR 147 1 . THR 148 1 . GLN 149 1 . ALA 150 1 . GLN 151 1 . LYS 152 1 . GLU 153 1 . ALA 154 1 . ILE 155 1 . TYR 156 1 . ARG 157 1 . GLN 158 1 . LEU 159 1 . ASP 160 1 . GLN 161 1 . THR 162 1 . THR 163 1 . GLN 164 1 . ARG 165 1 . PHE 166 1 . ASN 167 1 . VAL 168 1 . GLY 169 1 . LEU 170 1 . VAL 171 1 . ALA 172 1 . ILE 173 1 . THR 174 1 . ASP 175 1 . VAL 176 1 . GLN 177 1 . ASN 178 1 . ALA 179 1 . ARG 180 1 . ALA 181 1 . GLN 182 1 . TYR 183 1 . ASP 184 1 . THR 185 1 . VAL 186 1 . LEU 187 1 . ALA 188 1 . ASN 189 1 . GLU 190 1 . VAL 191 1 . THR 192 1 . ALA 193 1 . ARG 194 1 . ASN 195 1 . ASN 196 1 . LEU 197 1 . ASP 198 1 . ASN 199 1 . ALA 200 1 . VAL 201 1 . GLU 202 1 . GLN 203 1 . LEU 204 1 . ARG 205 1 . GLN 206 1 . ILE 207 1 . THR 208 1 . GLY 209 1 . ASN 210 1 . TYR 211 1 . TYR 212 1 . PRO 213 1 . GLU 214 1 . LEU 215 1 . ALA 216 1 . ALA 217 1 . LEU 218 1 . ASN 219 1 . VAL 220 1 . GLU 221 1 . ASN 222 1 . PHE 223 1 . LYS 224 1 . THR 225 1 . ASP 226 1 . LYS 227 1 . PRO 228 1 . GLN 229 1 . PRO 230 1 . VAL 231 1 . ASN 232 1 . ALA 233 1 . LEU 234 1 . LEU 235 1 . LYS 236 1 . GLU 237 1 . ALA 238 1 . GLU 239 1 . LYS 240 1 . ARG 241 1 . ASN 242 1 . LEU 243 1 . SER 244 1 . LEU 245 1 . LEU 246 1 . GLN 247 1 . ALA 248 1 . ARG 249 1 . LEU 250 1 . SER 251 1 . GLN 252 1 . ASP 253 1 . LEU 254 1 . ALA 255 1 . ARG 256 1 . GLU 257 1 . GLN 258 1 . ILE 259 1 . ARG 260 1 . GLN 261 1 . ALA 262 1 . GLN 263 1 . ASP 264 1 . GLY 265 1 . HIS 266 1 . LEU 267 1 . PRO 268 1 . THR 269 1 . LEU 270 1 . ASP 271 1 . LEU 272 1 . THR 273 1 . ALA 274 1 . SER 275 1 . THR 276 1 . GLY 277 1 . ILE 278 1 . SER 279 1 . ASP 280 1 . THR 281 1 . SER 282 1 . TYR 283 1 . SER 284 1 . GLY 285 1 . SER 286 1 . LYS 287 1 . THR 288 1 . ARG 289 1 . GLY 290 1 . ALA 291 1 . ALA 292 1 . GLY 293 1 . THR 294 1 . GLN 295 1 . TYR 296 1 . ASP 297 1 . ASP 298 1 . SER 299 1 . ASN 300 1 . MET 301 1 . GLY 302 1 . GLN 303 1 . ASN 304 1 . LYS 305 1 . VAL 306 1 . GLY 307 1 . LEU 308 1 . SER 309 1 . PHE 310 1 . SER 311 1 . LEU 312 1 . PRO 313 1 . ILE 314 1 . TYR 315 1 . GLN 316 1 . GLY 317 1 . GLY 318 1 . MET 319 1 . VAL 320 1 . ASN 321 1 . SER 322 1 . GLN 323 1 . VAL 324 1 . LYS 325 1 . GLN 326 1 . ALA 327 1 . GLN 328 1 . TYR 329 1 . ASN 330 1 . PHE 331 1 . VAL 332 1 . GLY 333 1 . ALA 334 1 . SER 335 1 . GLU 336 1 . GLN 337 1 . LEU 338 1 . GLU 339 1 . SER 340 1 . ALA 341 1 . HIS 342 1 . ARG 343 1 . SER 344 1 . VAL 345 1 . VAL 346 1 . GLN 347 1 . THR 348 1 . VAL 349 1 . ARG 350 1 . SER 351 1 . SER 352 1 . PHE 353 1 . ASN 354 1 . ASN 355 1 . ILE 356 1 . ASN 357 1 . ALA 358 1 . SER 359 1 . ILE 360 1 . SER 361 1 . SER 362 1 . ILE 363 1 . ASN 364 1 . ALA 365 1 . TYR 366 1 . LYS 367 1 . GLN 368 1 . ALA 369 1 . VAL 370 1 . VAL 371 1 . SER 372 1 . ALA 373 1 . GLN 374 1 . SER 375 1 . SER 376 1 . LEU 377 1 . ASP 378 1 . ALA 379 1 . MET 380 1 . GLU 381 1 . ALA 382 1 . GLY 383 1 . TYR 384 1 . SER 385 1 . VAL 386 1 . GLY 387 1 . THR 388 1 . ARG 389 1 . THR 390 1 . ILE 391 1 . VAL 392 1 . ASP 393 1 . VAL 394 1 . LEU 395 1 . ASP 396 1 . ALA 397 1 . THR 398 1 . THR 399 1 . THR 400 1 . LEU 401 1 . TYR 402 1 . ASN 403 1 . ALA 404 1 . LYS 405 1 . GLN 406 1 . GLU 407 1 . LEU 408 1 . ALA 409 1 . ASN 410 1 . ALA 411 1 . ARG 412 1 . TYR 413 1 . ASN 414 1 . TYR 415 1 . LEU 416 1 . ILE 417 1 . ASN 418 1 . GLN 419 1 . LEU 420 1 . ASN 421 1 . ILE 422 1 . LYS 423 1 . SER 424 1 . ALA 425 1 . LEU 426 1 . GLY 427 1 . THR 428 1 . LEU 429 1 . ASN 430 1 . GLU 431 1 . GLN 432 1 . ASP 433 1 . LEU 434 1 . LEU 435 1 . ALA 436 1 . LEU 437 1 . ASN 438 1 . ASN 439 1 . ALA 440 1 . LEU 441 1 . SER 442 1 . LYS 443 1 . PRO 444 1 . VAL 445 1 . SER 446 1 . THR 447 1 . ASN 448 1 . PRO 449 1 . GLU 450 1 . ASN 451 1 . VAL 452 1 . ALA 453 1 . PRO 454 1 . GLN 455 1 . THR 456 1 . PRO 457 1 . GLU 458 1 . GLN 459 1 . ASN 460 1 . ALA 461 1 . ILE 462 1 . ALA 463 1 . ASP 464 1 . GLY 465 1 . TYR 466 1 . ALA 467 1 . PRO 468 1 . ASP 469 1 . SER 470 1 . PRO 471 1 . ALA 472 1 . PRO 473 1 . VAL 474 1 . VAL 475 1 . GLN 476 1 . GLN 477 1 . THR 478 1 . SER 479 1 . ALA 480 1 . ARG 481 1 . THR 482 1 . THR 483 1 . THR 484 1 . SER 485 1 . ASN 486 1 . GLY 487 1 . HIS 488 1 . ASN 489 1 . PRO 490 1 . PHE 491 1 . ARG 492 1 . ASN 493 # _ihm_chemical_component_descriptor.auth_name L-Photo-Leucine _ihm_chemical_component_descriptor.chemical_name . _ihm_chemical_component_descriptor.common_name L-Photo-Leucine _ihm_chemical_component_descriptor.details . _ihm_chemical_component_descriptor.id 1 _ihm_chemical_component_descriptor.inchi 1S/C5H9N3O2/c1-5(7-8-5)2-3(6)4(9)10/h3H,2,6H2,1H3,(H,9,10)/t3-/m0/s1 _ihm_chemical_component_descriptor.inchi_key MJRDGTVDJKACQZ-VKHMYHEASA-N _ihm_chemical_component_descriptor.smiles CC1(C[C@H](N)C(O)=O)N=N1 _ihm_chemical_component_descriptor.smiles_canonical . # loop_ _ihm_cross_link_list.comp_id_1 _ihm_cross_link_list.comp_id_2 _ihm_cross_link_list.dataset_list_id _ihm_cross_link_list.details _ihm_cross_link_list.entity_description_1 _ihm_cross_link_list.entity_description_2 _ihm_cross_link_list.entity_id_1 _ihm_cross_link_list.entity_id_2 _ihm_cross_link_list.group_id _ihm_cross_link_list.id _ihm_cross_link_list.linker_chem_comp_descriptor_id _ihm_cross_link_list.linker_type _ihm_cross_link_list.seq_id_1 _ihm_cross_link_list.seq_id_2 LEU TYR 1 . P02930 P02930 1 1 1 1 1 L-Photo-Leucine 218 413 ALA LEU 1 . P02930 P02930 1 1 2 2 1 L-Photo-Leucine 181 401 LEU ASN 1 . P02930 P02930 1 1 3 3 1 L-Photo-Leucine 218 414 LEU TYR 1 . P02930 P02930 1 1 4 4 1 L-Photo-Leucine 218 415 LYS LEU 1 . P02930 P02930 1 1 5 5 1 L-Photo-Leucine 224 416 # loop_ _ihm_cross_link_restraint.asym_id_1 _ihm_cross_link_restraint.asym_id_2 _ihm_cross_link_restraint.atom_id_1 _ihm_cross_link_restraint.atom_id_2 _ihm_cross_link_restraint.comp_id_1 _ihm_cross_link_restraint.comp_id_2 _ihm_cross_link_restraint.conditional_crosslink_flag _ihm_cross_link_restraint.distance_threshold _ihm_cross_link_restraint.entity_id_1 _ihm_cross_link_restraint.entity_id_2 _ihm_cross_link_restraint.group_id _ihm_cross_link_restraint.id _ihm_cross_link_restraint.model_granularity _ihm_cross_link_restraint.pseudo_site_flag _ihm_cross_link_restraint.psi _ihm_cross_link_restraint.restraint_type _ihm_cross_link_restraint.seq_id_1 _ihm_cross_link_restraint.seq_id_2 _ihm_cross_link_restraint.sigma_1 _ihm_cross_link_restraint.sigma_2 A A . . LEU TYR . 10 1 1 1 1 by-residue NO 0.05 "upper bound" 218 413 . . A A . . ALA LEU . 10 1 1 2 2 by-residue NO 0.05 "upper bound" 181 401 . . A A . . LEU ASN . 10 1 1 3 3 by-residue NO 0.05 "upper bound" 218 414 . . A A . . LEU TYR . 10 1 1 4 4 by-residue NO 0.05 "upper bound" 218 415 . . A A . . LYS LEU . 10 1 1 5 5 by-residue NO 0.05 "upper bound" 224 416 . . # _ihm_dataset_group.application . _ihm_dataset_group.details . _ihm_dataset_group.id 1 _ihm_dataset_group.name . # _ihm_dataset_group_link.dataset_list_id 1 _ihm_dataset_group_link.group_id 1 # _ihm_dataset_list.data_type "Crosslinking-MS data" _ihm_dataset_list.database_hosted YES _ihm_dataset_list.details . _ihm_dataset_list.id 1 # _ihm_dataset_related_db_reference.accession_code JPST001851 _ihm_dataset_related_db_reference.dataset_list_id 1 _ihm_dataset_related_db_reference.db_name jPOSTrepo _ihm_dataset_related_db_reference.details . _ihm_dataset_related_db_reference.id 1 _ihm_dataset_related_db_reference.version . # _ihm_entity_poly_segment.comp_id_begin MET _ihm_entity_poly_segment.comp_id_end ASN _ihm_entity_poly_segment.entity_id 1 _ihm_entity_poly_segment.id 1 _ihm_entity_poly_segment.seq_id_begin 1 _ihm_entity_poly_segment.seq_id_end 493 # _ihm_model_group.details . _ihm_model_group.id 1 _ihm_model_group.name . # loop_ _ihm_model_group_link.group_id _ihm_model_group_link.model_id 1 1 1 2 1 3 1 4 1 5 1 6 1 7 1 8 1 9 1 10 # loop_ _ihm_model_list.assembly_id _ihm_model_list.model_id _ihm_model_list.model_name _ihm_model_list.protocol_id _ihm_model_list.representation_id 1 1 . 1 1 1 2 . 1 1 1 3 . 1 1 1 4 . 1 1 1 5 . 1 1 1 6 . 1 1 1 7 . 1 1 1 8 . 1 1 1 9 . 1 1 1 10 . 1 1 # _ihm_model_representation.details . _ihm_model_representation.id 1 _ihm_model_representation.name . # _ihm_model_representation_details.description . _ihm_model_representation_details.entity_asym_id A _ihm_model_representation_details.entity_description P02930 _ihm_model_representation_details.entity_id 1 _ihm_model_representation_details.entity_poly_segment_id 1 _ihm_model_representation_details.id 1 _ihm_model_representation_details.model_granularity by-atom _ihm_model_representation_details.model_mode flexible _ihm_model_representation_details.model_object_count . _ihm_model_representation_details.model_object_primitive atomistic _ihm_model_representation_details.representation_id 1 _ihm_model_representation_details.starting_model_id . # _ihm_modeling_protocol.details . _ihm_modeling_protocol.id 1 _ihm_modeling_protocol.num_steps 1 _ihm_modeling_protocol.protocol_name AlphaLink # _ihm_modeling_protocol_details.dataset_group_id 1 _ihm_modeling_protocol_details.description . _ihm_modeling_protocol_details.ensemble_flag YES _ihm_modeling_protocol_details.id 1 _ihm_modeling_protocol_details.multi_scale_flag NO _ihm_modeling_protocol_details.multi_state_flag NO _ihm_modeling_protocol_details.num_models_begin 0 _ihm_modeling_protocol_details.num_models_end 10 _ihm_modeling_protocol_details.ordered_flag NO _ihm_modeling_protocol_details.protocol_id 1 _ihm_modeling_protocol_details.script_file_id . _ihm_modeling_protocol_details.software_id . _ihm_modeling_protocol_details.step_id 1 _ihm_modeling_protocol_details.step_method "AlphaLink with 10 msa subsamples" _ihm_modeling_protocol_details.step_name AlphaLink _ihm_modeling_protocol_details.struct_assembly_description . _ihm_modeling_protocol_details.struct_assembly_id 1 # _ihm_struct_assembly.description "Integrative modeling using in-cell photo-crosslinking mass spectrometry and deep learning" _ihm_struct_assembly.id 1 _ihm_struct_assembly.name "Integrative model" # _ihm_struct_assembly_details.assembly_id 1 _ihm_struct_assembly_details.asym_id A _ihm_struct_assembly_details.entity_description P02930 _ihm_struct_assembly_details.entity_id 1 _ihm_struct_assembly_details.entity_poly_segment_id 1 _ihm_struct_assembly_details.id 1 _ihm_struct_assembly_details.parent_assembly_id 1 # _software.citation_id 1 _software.classification "model building" _software.description "protein structure prediction by deep learning assisted by experimental distance restraints" _software.location https://github.com/lhatsk/AlphaLink _software.name AlphaLink _software.pdbx_ordinal 1 _software.type program _software.version 1.0 # _struct.entry_id 9A2X _struct.pdbx_CASP_flag . _struct.pdbx_descriptor . _struct.pdbx_details . _struct.pdbx_model_details . _struct.pdbx_model_type_details . _struct.title "Model of E. coli TolC by in-cell photo-crosslinking MS and deep learning" _struct.pdbx_structure_determination_methodology integrative # _struct_asym.details P02930 _struct_asym.entity_id 1 _struct_asym.id A _struct_asym.pdbx_PDB_id . _struct_asym.pdbx_alt_id . _struct_asym.pdbx_blank_PDB_chainid_flag . _struct_asym.pdbx_modified . _struct_asym.pdbx_order . _struct_asym.pdbx_type . # _struct_ref.db_code TOLC_ECOLI _struct_ref.db_name UNP _struct_ref.details "Outer membrane protein TolC OS=Escherichia coli (strain K12) OX=83333 GN=tolC PE=1 SV=3" _struct_ref.entity_id 1 _struct_ref.id 1 _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_accession P02930 _struct_ref.pdbx_seq_one_letter_code MKKLLPILIGLSLSGFSSLSQAENLMQVYQQARLSNPELRKSAADRDAAFEKINEARSPLLPQLGLGADYTYSNGYRDANGINSNATSASLQLTQSIFDMSKWRALTLQEKAAGIQDVTYQTDQQTLILNTATAYFNVLNAIDVLSYTQAQKEAIYRQLDQTTQRFNVGLVAITDVQNARAQYDTVLANEVTARNNLDNAVEQLRQITGNYYPELAALNVENFKTDKPQPVNALLKEAEKRNLSLLQARLSQDLAREQIRQAQDGHLPTLDLTASTGISDTSYSGSKTRGAAGTQYDDSNMGQNKVGLSFSLPIYQGGMVNSQVKQAQYNFVGASEQLESAHRSVVQTVRSSFNNINASISSINAYKQAVVSAQSSLDAMEAGYSVGTRTIVDVLDATTTLYNAKQELANARYNYLINQLNIKSALGTLNEQDLLALNNALSKPVSTNPENVAPQTPEQNAIADGYAPDSPAPVVQQTSARTTTSNGHNPFRN # _struct_ref_seq.align_id 1 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.db_align_end 493 _struct_ref_seq.ref_id 1 _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.seq_align_end 493 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code A 1 1 MET 1 1 MET MET A . A 1 2 LYS 2 2 LYS LYS A . A 1 3 LYS 3 3 LYS LYS A . A 1 4 LEU 4 4 LEU LEU A . A 1 5 LEU 5 5 LEU LEU A . A 1 6 PRO 6 6 PRO PRO A . A 1 7 ILE 7 7 ILE ILE A . A 1 8 LEU 8 8 LEU LEU A . A 1 9 ILE 9 9 ILE ILE A . A 1 10 GLY 10 10 GLY GLY A . A 1 11 LEU 11 11 LEU LEU A . A 1 12 SER 12 12 SER SER A . A 1 13 LEU 13 13 LEU LEU A . A 1 14 SER 14 14 SER SER A . A 1 15 GLY 15 15 GLY GLY A . A 1 16 PHE 16 16 PHE PHE A . A 1 17 SER 17 17 SER SER A . A 1 18 SER 18 18 SER SER A . A 1 19 LEU 19 19 LEU LEU A . A 1 20 SER 20 20 SER SER A . A 1 21 GLN 21 21 GLN GLN A . A 1 22 ALA 22 22 ALA ALA A . A 1 23 GLU 23 23 GLU GLU A . A 1 24 ASN 24 24 ASN ASN A . A 1 25 LEU 25 25 LEU LEU A . A 1 26 MET 26 26 MET MET A . A 1 27 GLN 27 27 GLN GLN A . A 1 28 VAL 28 28 VAL VAL A . A 1 29 TYR 29 29 TYR TYR A . A 1 30 GLN 30 30 GLN GLN A . A 1 31 GLN 31 31 GLN GLN A . A 1 32 ALA 32 32 ALA ALA A . A 1 33 ARG 33 33 ARG ARG A . A 1 34 LEU 34 34 LEU LEU A . A 1 35 SER 35 35 SER SER A . A 1 36 ASN 36 36 ASN ASN A . A 1 37 PRO 37 37 PRO PRO A . A 1 38 GLU 38 38 GLU GLU A . A 1 39 LEU 39 39 LEU LEU A . A 1 40 ARG 40 40 ARG ARG A . A 1 41 LYS 41 41 LYS LYS A . A 1 42 SER 42 42 SER SER A . A 1 43 ALA 43 43 ALA ALA A . A 1 44 ALA 44 44 ALA ALA A . A 1 45 ASP 45 45 ASP ASP A . A 1 46 ARG 46 46 ARG ARG A . A 1 47 ASP 47 47 ASP ASP A . A 1 48 ALA 48 48 ALA ALA A . A 1 49 ALA 49 49 ALA ALA A . A 1 50 PHE 50 50 PHE PHE A . A 1 51 GLU 51 51 GLU GLU A . A 1 52 LYS 52 52 LYS LYS A . A 1 53 ILE 53 53 ILE ILE A . A 1 54 ASN 54 54 ASN ASN A . A 1 55 GLU 55 55 GLU GLU A . A 1 56 ALA 56 56 ALA ALA A . A 1 57 ARG 57 57 ARG ARG A . A 1 58 SER 58 58 SER SER A . A 1 59 PRO 59 59 PRO PRO A . A 1 60 LEU 60 60 LEU LEU A . A 1 61 LEU 61 61 LEU LEU A . A 1 62 PRO 62 62 PRO PRO A . A 1 63 GLN 63 63 GLN GLN A . A 1 64 LEU 64 64 LEU LEU A . A 1 65 GLY 65 65 GLY GLY A . A 1 66 LEU 66 66 LEU LEU A . A 1 67 GLY 67 67 GLY GLY A . A 1 68 ALA 68 68 ALA ALA A . A 1 69 ASP 69 69 ASP ASP A . A 1 70 TYR 70 70 TYR TYR A . A 1 71 THR 71 71 THR THR A . A 1 72 TYR 72 72 TYR TYR A . A 1 73 SER 73 73 SER SER A . A 1 74 ASN 74 74 ASN ASN A . A 1 75 GLY 75 75 GLY GLY A . A 1 76 TYR 76 76 TYR TYR A . A 1 77 ARG 77 77 ARG ARG A . A 1 78 ASP 78 78 ASP ASP A . A 1 79 ALA 79 79 ALA ALA A . A 1 80 ASN 80 80 ASN ASN A . A 1 81 GLY 81 81 GLY GLY A . A 1 82 ILE 82 82 ILE ILE A . A 1 83 ASN 83 83 ASN ASN A . A 1 84 SER 84 84 SER SER A . A 1 85 ASN 85 85 ASN ASN A . A 1 86 ALA 86 86 ALA ALA A . A 1 87 THR 87 87 THR THR A . A 1 88 SER 88 88 SER SER A . A 1 89 ALA 89 89 ALA ALA A . A 1 90 SER 90 90 SER SER A . A 1 91 LEU 91 91 LEU LEU A . A 1 92 GLN 92 92 GLN GLN A . A 1 93 LEU 93 93 LEU LEU A . A 1 94 THR 94 94 THR THR A . A 1 95 GLN 95 95 GLN GLN A . A 1 96 SER 96 96 SER SER A . A 1 97 ILE 97 97 ILE ILE A . A 1 98 PHE 98 98 PHE PHE A . A 1 99 ASP 99 99 ASP ASP A . A 1 100 MET 100 100 MET MET A . A 1 101 SER 101 101 SER SER A . A 1 102 LYS 102 102 LYS LYS A . A 1 103 TRP 103 103 TRP TRP A . A 1 104 ARG 104 104 ARG ARG A . A 1 105 ALA 105 105 ALA ALA A . A 1 106 LEU 106 106 LEU LEU A . A 1 107 THR 107 107 THR THR A . A 1 108 LEU 108 108 LEU LEU A . A 1 109 GLN 109 109 GLN GLN A . A 1 110 GLU 110 110 GLU GLU A . A 1 111 LYS 111 111 LYS LYS A . A 1 112 ALA 112 112 ALA ALA A . A 1 113 ALA 113 113 ALA ALA A . A 1 114 GLY 114 114 GLY GLY A . A 1 115 ILE 115 115 ILE ILE A . A 1 116 GLN 116 116 GLN GLN A . A 1 117 ASP 117 117 ASP ASP A . A 1 118 VAL 118 118 VAL VAL A . A 1 119 THR 119 119 THR THR A . A 1 120 TYR 120 120 TYR TYR A . A 1 121 GLN 121 121 GLN GLN A . A 1 122 THR 122 122 THR THR A . A 1 123 ASP 123 123 ASP ASP A . A 1 124 GLN 124 124 GLN GLN A . A 1 125 GLN 125 125 GLN GLN A . A 1 126 THR 126 126 THR THR A . A 1 127 LEU 127 127 LEU LEU A . A 1 128 ILE 128 128 ILE ILE A . A 1 129 LEU 129 129 LEU LEU A . A 1 130 ASN 130 130 ASN ASN A . A 1 131 THR 131 131 THR THR A . A 1 132 ALA 132 132 ALA ALA A . A 1 133 THR 133 133 THR THR A . A 1 134 ALA 134 134 ALA ALA A . A 1 135 TYR 135 135 TYR TYR A . A 1 136 PHE 136 136 PHE PHE A . A 1 137 ASN 137 137 ASN ASN A . A 1 138 VAL 138 138 VAL VAL A . A 1 139 LEU 139 139 LEU LEU A . A 1 140 ASN 140 140 ASN ASN A . A 1 141 ALA 141 141 ALA ALA A . A 1 142 ILE 142 142 ILE ILE A . A 1 143 ASP 143 143 ASP ASP A . A 1 144 VAL 144 144 VAL VAL A . A 1 145 LEU 145 145 LEU LEU A . A 1 146 SER 146 146 SER SER A . A 1 147 TYR 147 147 TYR TYR A . A 1 148 THR 148 148 THR THR A . A 1 149 GLN 149 149 GLN GLN A . A 1 150 ALA 150 150 ALA ALA A . A 1 151 GLN 151 151 GLN GLN A . A 1 152 LYS 152 152 LYS LYS A . A 1 153 GLU 153 153 GLU GLU A . A 1 154 ALA 154 154 ALA ALA A . A 1 155 ILE 155 155 ILE ILE A . A 1 156 TYR 156 156 TYR TYR A . A 1 157 ARG 157 157 ARG ARG A . A 1 158 GLN 158 158 GLN GLN A . A 1 159 LEU 159 159 LEU LEU A . A 1 160 ASP 160 160 ASP ASP A . A 1 161 GLN 161 161 GLN GLN A . A 1 162 THR 162 162 THR THR A . A 1 163 THR 163 163 THR THR A . A 1 164 GLN 164 164 GLN GLN A . A 1 165 ARG 165 165 ARG ARG A . A 1 166 PHE 166 166 PHE PHE A . A 1 167 ASN 167 167 ASN ASN A . A 1 168 VAL 168 168 VAL VAL A . A 1 169 GLY 169 169 GLY GLY A . A 1 170 LEU 170 170 LEU LEU A . A 1 171 VAL 171 171 VAL VAL A . A 1 172 ALA 172 172 ALA ALA A . A 1 173 ILE 173 173 ILE ILE A . A 1 174 THR 174 174 THR THR A . A 1 175 ASP 175 175 ASP ASP A . A 1 176 VAL 176 176 VAL VAL A . A 1 177 GLN 177 177 GLN GLN A . A 1 178 ASN 178 178 ASN ASN A . A 1 179 ALA 179 179 ALA ALA A . A 1 180 ARG 180 180 ARG ARG A . A 1 181 ALA 181 181 ALA ALA A . A 1 182 GLN 182 182 GLN GLN A . A 1 183 TYR 183 183 TYR TYR A . A 1 184 ASP 184 184 ASP ASP A . A 1 185 THR 185 185 THR THR A . A 1 186 VAL 186 186 VAL VAL A . A 1 187 LEU 187 187 LEU LEU A . A 1 188 ALA 188 188 ALA ALA A . A 1 189 ASN 189 189 ASN ASN A . A 1 190 GLU 190 190 GLU GLU A . A 1 191 VAL 191 191 VAL VAL A . A 1 192 THR 192 192 THR THR A . A 1 193 ALA 193 193 ALA ALA A . A 1 194 ARG 194 194 ARG ARG A . A 1 195 ASN 195 195 ASN ASN A . A 1 196 ASN 196 196 ASN ASN A . A 1 197 LEU 197 197 LEU LEU A . A 1 198 ASP 198 198 ASP ASP A . A 1 199 ASN 199 199 ASN ASN A . A 1 200 ALA 200 200 ALA ALA A . A 1 201 VAL 201 201 VAL VAL A . A 1 202 GLU 202 202 GLU GLU A . A 1 203 GLN 203 203 GLN GLN A . A 1 204 LEU 204 204 LEU LEU A . A 1 205 ARG 205 205 ARG ARG A . A 1 206 GLN 206 206 GLN GLN A . A 1 207 ILE 207 207 ILE ILE A . A 1 208 THR 208 208 THR THR A . A 1 209 GLY 209 209 GLY GLY A . A 1 210 ASN 210 210 ASN ASN A . A 1 211 TYR 211 211 TYR TYR A . A 1 212 TYR 212 212 TYR TYR A . A 1 213 PRO 213 213 PRO PRO A . A 1 214 GLU 214 214 GLU GLU A . A 1 215 LEU 215 215 LEU LEU A . A 1 216 ALA 216 216 ALA ALA A . A 1 217 ALA 217 217 ALA ALA A . A 1 218 LEU 218 218 LEU LEU A . A 1 219 ASN 219 219 ASN ASN A . A 1 220 VAL 220 220 VAL VAL A . A 1 221 GLU 221 221 GLU GLU A . A 1 222 ASN 222 222 ASN ASN A . A 1 223 PHE 223 223 PHE PHE A . A 1 224 LYS 224 224 LYS LYS A . A 1 225 THR 225 225 THR THR A . A 1 226 ASP 226 226 ASP ASP A . A 1 227 LYS 227 227 LYS LYS A . A 1 228 PRO 228 228 PRO PRO A . A 1 229 GLN 229 229 GLN GLN A . A 1 230 PRO 230 230 PRO PRO A . A 1 231 VAL 231 231 VAL VAL A . A 1 232 ASN 232 232 ASN ASN A . A 1 233 ALA 233 233 ALA ALA A . A 1 234 LEU 234 234 LEU LEU A . A 1 235 LEU 235 235 LEU LEU A . A 1 236 LYS 236 236 LYS LYS A . A 1 237 GLU 237 237 GLU GLU A . A 1 238 ALA 238 238 ALA ALA A . A 1 239 GLU 239 239 GLU GLU A . A 1 240 LYS 240 240 LYS LYS A . A 1 241 ARG 241 241 ARG ARG A . A 1 242 ASN 242 242 ASN ASN A . A 1 243 LEU 243 243 LEU LEU A . A 1 244 SER 244 244 SER SER A . A 1 245 LEU 245 245 LEU LEU A . A 1 246 LEU 246 246 LEU LEU A . A 1 247 GLN 247 247 GLN GLN A . A 1 248 ALA 248 248 ALA ALA A . A 1 249 ARG 249 249 ARG ARG A . A 1 250 LEU 250 250 LEU LEU A . A 1 251 SER 251 251 SER SER A . A 1 252 GLN 252 252 GLN GLN A . A 1 253 ASP 253 253 ASP ASP A . A 1 254 LEU 254 254 LEU LEU A . A 1 255 ALA 255 255 ALA ALA A . A 1 256 ARG 256 256 ARG ARG A . A 1 257 GLU 257 257 GLU GLU A . A 1 258 GLN 258 258 GLN GLN A . A 1 259 ILE 259 259 ILE ILE A . A 1 260 ARG 260 260 ARG ARG A . A 1 261 GLN 261 261 GLN GLN A . A 1 262 ALA 262 262 ALA ALA A . A 1 263 GLN 263 263 GLN GLN A . A 1 264 ASP 264 264 ASP ASP A . A 1 265 GLY 265 265 GLY GLY A . A 1 266 HIS 266 266 HIS HIS A . A 1 267 LEU 267 267 LEU LEU A . A 1 268 PRO 268 268 PRO PRO A . A 1 269 THR 269 269 THR THR A . A 1 270 LEU 270 270 LEU LEU A . A 1 271 ASP 271 271 ASP ASP A . A 1 272 LEU 272 272 LEU LEU A . A 1 273 THR 273 273 THR THR A . A 1 274 ALA 274 274 ALA ALA A . A 1 275 SER 275 275 SER SER A . A 1 276 THR 276 276 THR THR A . A 1 277 GLY 277 277 GLY GLY A . A 1 278 ILE 278 278 ILE ILE A . A 1 279 SER 279 279 SER SER A . A 1 280 ASP 280 280 ASP ASP A . A 1 281 THR 281 281 THR THR A . A 1 282 SER 282 282 SER SER A . A 1 283 TYR 283 283 TYR TYR A . A 1 284 SER 284 284 SER SER A . A 1 285 GLY 285 285 GLY GLY A . A 1 286 SER 286 286 SER SER A . A 1 287 LYS 287 287 LYS LYS A . A 1 288 THR 288 288 THR THR A . A 1 289 ARG 289 289 ARG ARG A . A 1 290 GLY 290 290 GLY GLY A . A 1 291 ALA 291 291 ALA ALA A . A 1 292 ALA 292 292 ALA ALA A . A 1 293 GLY 293 293 GLY GLY A . A 1 294 THR 294 294 THR THR A . A 1 295 GLN 295 295 GLN GLN A . A 1 296 TYR 296 296 TYR TYR A . A 1 297 ASP 297 297 ASP ASP A . A 1 298 ASP 298 298 ASP ASP A . A 1 299 SER 299 299 SER SER A . A 1 300 ASN 300 300 ASN ASN A . A 1 301 MET 301 301 MET MET A . A 1 302 GLY 302 302 GLY GLY A . A 1 303 GLN 303 303 GLN GLN A . A 1 304 ASN 304 304 ASN ASN A . A 1 305 LYS 305 305 LYS LYS A . A 1 306 VAL 306 306 VAL VAL A . A 1 307 GLY 307 307 GLY GLY A . A 1 308 LEU 308 308 LEU LEU A . A 1 309 SER 309 309 SER SER A . A 1 310 PHE 310 310 PHE PHE A . A 1 311 SER 311 311 SER SER A . A 1 312 LEU 312 312 LEU LEU A . A 1 313 PRO 313 313 PRO PRO A . A 1 314 ILE 314 314 ILE ILE A . A 1 315 TYR 315 315 TYR TYR A . A 1 316 GLN 316 316 GLN GLN A . A 1 317 GLY 317 317 GLY GLY A . A 1 318 GLY 318 318 GLY GLY A . A 1 319 MET 319 319 MET MET A . A 1 320 VAL 320 320 VAL VAL A . A 1 321 ASN 321 321 ASN ASN A . A 1 322 SER 322 322 SER SER A . A 1 323 GLN 323 323 GLN GLN A . A 1 324 VAL 324 324 VAL VAL A . A 1 325 LYS 325 325 LYS LYS A . A 1 326 GLN 326 326 GLN GLN A . A 1 327 ALA 327 327 ALA ALA A . A 1 328 GLN 328 328 GLN GLN A . A 1 329 TYR 329 329 TYR TYR A . A 1 330 ASN 330 330 ASN ASN A . A 1 331 PHE 331 331 PHE PHE A . A 1 332 VAL 332 332 VAL VAL A . A 1 333 GLY 333 333 GLY GLY A . A 1 334 ALA 334 334 ALA ALA A . A 1 335 SER 335 335 SER SER A . A 1 336 GLU 336 336 GLU GLU A . A 1 337 GLN 337 337 GLN GLN A . A 1 338 LEU 338 338 LEU LEU A . A 1 339 GLU 339 339 GLU GLU A . A 1 340 SER 340 340 SER SER A . A 1 341 ALA 341 341 ALA ALA A . A 1 342 HIS 342 342 HIS HIS A . A 1 343 ARG 343 343 ARG ARG A . A 1 344 SER 344 344 SER SER A . A 1 345 VAL 345 345 VAL VAL A . A 1 346 VAL 346 346 VAL VAL A . A 1 347 GLN 347 347 GLN GLN A . A 1 348 THR 348 348 THR THR A . A 1 349 VAL 349 349 VAL VAL A . A 1 350 ARG 350 350 ARG ARG A . A 1 351 SER 351 351 SER SER A . A 1 352 SER 352 352 SER SER A . A 1 353 PHE 353 353 PHE PHE A . A 1 354 ASN 354 354 ASN ASN A . A 1 355 ASN 355 355 ASN ASN A . A 1 356 ILE 356 356 ILE ILE A . A 1 357 ASN 357 357 ASN ASN A . A 1 358 ALA 358 358 ALA ALA A . A 1 359 SER 359 359 SER SER A . A 1 360 ILE 360 360 ILE ILE A . A 1 361 SER 361 361 SER SER A . A 1 362 SER 362 362 SER SER A . A 1 363 ILE 363 363 ILE ILE A . A 1 364 ASN 364 364 ASN ASN A . A 1 365 ALA 365 365 ALA ALA A . A 1 366 TYR 366 366 TYR TYR A . A 1 367 LYS 367 367 LYS LYS A . A 1 368 GLN 368 368 GLN GLN A . A 1 369 ALA 369 369 ALA ALA A . A 1 370 VAL 370 370 VAL VAL A . A 1 371 VAL 371 371 VAL VAL A . A 1 372 SER 372 372 SER SER A . A 1 373 ALA 373 373 ALA ALA A . A 1 374 GLN 374 374 GLN GLN A . A 1 375 SER 375 375 SER SER A . A 1 376 SER 376 376 SER SER A . A 1 377 LEU 377 377 LEU LEU A . A 1 378 ASP 378 378 ASP ASP A . A 1 379 ALA 379 379 ALA ALA A . A 1 380 MET 380 380 MET MET A . A 1 381 GLU 381 381 GLU GLU A . A 1 382 ALA 382 382 ALA ALA A . A 1 383 GLY 383 383 GLY GLY A . A 1 384 TYR 384 384 TYR TYR A . A 1 385 SER 385 385 SER SER A . A 1 386 VAL 386 386 VAL VAL A . A 1 387 GLY 387 387 GLY GLY A . A 1 388 THR 388 388 THR THR A . A 1 389 ARG 389 389 ARG ARG A . A 1 390 THR 390 390 THR THR A . A 1 391 ILE 391 391 ILE ILE A . A 1 392 VAL 392 392 VAL VAL A . A 1 393 ASP 393 393 ASP ASP A . A 1 394 VAL 394 394 VAL VAL A . A 1 395 LEU 395 395 LEU LEU A . A 1 396 ASP 396 396 ASP ASP A . A 1 397 ALA 397 397 ALA ALA A . A 1 398 THR 398 398 THR THR A . A 1 399 THR 399 399 THR THR A . A 1 400 THR 400 400 THR THR A . A 1 401 LEU 401 401 LEU LEU A . A 1 402 TYR 402 402 TYR TYR A . A 1 403 ASN 403 403 ASN ASN A . A 1 404 ALA 404 404 ALA ALA A . A 1 405 LYS 405 405 LYS LYS A . A 1 406 GLN 406 406 GLN GLN A . A 1 407 GLU 407 407 GLU GLU A . A 1 408 LEU 408 408 LEU LEU A . A 1 409 ALA 409 409 ALA ALA A . A 1 410 ASN 410 410 ASN ASN A . A 1 411 ALA 411 411 ALA ALA A . A 1 412 ARG 412 412 ARG ARG A . A 1 413 TYR 413 413 TYR TYR A . A 1 414 ASN 414 414 ASN ASN A . A 1 415 TYR 415 415 TYR TYR A . A 1 416 LEU 416 416 LEU LEU A . A 1 417 ILE 417 417 ILE ILE A . A 1 418 ASN 418 418 ASN ASN A . A 1 419 GLN 419 419 GLN GLN A . A 1 420 LEU 420 420 LEU LEU A . A 1 421 ASN 421 421 ASN ASN A . A 1 422 ILE 422 422 ILE ILE A . A 1 423 LYS 423 423 LYS LYS A . A 1 424 SER 424 424 SER SER A . A 1 425 ALA 425 425 ALA ALA A . A 1 426 LEU 426 426 LEU LEU A . A 1 427 GLY 427 427 GLY GLY A . A 1 428 THR 428 428 THR THR A . A 1 429 LEU 429 429 LEU LEU A . A 1 430 ASN 430 430 ASN ASN A . A 1 431 GLU 431 431 GLU GLU A . A 1 432 GLN 432 432 GLN GLN A . A 1 433 ASP 433 433 ASP ASP A . A 1 434 LEU 434 434 LEU LEU A . A 1 435 LEU 435 435 LEU LEU A . A 1 436 ALA 436 436 ALA ALA A . A 1 437 LEU 437 437 LEU LEU A . A 1 438 ASN 438 438 ASN ASN A . A 1 439 ASN 439 439 ASN ASN A . A 1 440 ALA 440 440 ALA ALA A . A 1 441 LEU 441 441 LEU LEU A . A 1 442 SER 442 442 SER SER A . A 1 443 LYS 443 443 LYS LYS A . A 1 444 PRO 444 444 PRO PRO A . A 1 445 VAL 445 445 VAL VAL A . A 1 446 SER 446 446 SER SER A . A 1 447 THR 447 447 THR THR A . A 1 448 ASN 448 448 ASN ASN A . A 1 449 PRO 449 449 PRO PRO A . A 1 450 GLU 450 450 GLU GLU A . A 1 451 ASN 451 451 ASN ASN A . A 1 452 VAL 452 452 VAL VAL A . A 1 453 ALA 453 453 ALA ALA A . A 1 454 PRO 454 454 PRO PRO A . A 1 455 GLN 455 455 GLN GLN A . A 1 456 THR 456 456 THR THR A . A 1 457 PRO 457 457 PRO PRO A . A 1 458 GLU 458 458 GLU GLU A . A 1 459 GLN 459 459 GLN GLN A . A 1 460 ASN 460 460 ASN ASN A . A 1 461 ALA 461 461 ALA ALA A . A 1 462 ILE 462 462 ILE ILE A . A 1 463 ALA 463 463 ALA ALA A . A 1 464 ASP 464 464 ASP ASP A . A 1 465 GLY 465 465 GLY GLY A . A 1 466 TYR 466 466 TYR TYR A . A 1 467 ALA 467 467 ALA ALA A . A 1 468 PRO 468 468 PRO PRO A . A 1 469 ASP 469 469 ASP ASP A . A 1 470 SER 470 470 SER SER A . A 1 471 PRO 471 471 PRO PRO A . A 1 472 ALA 472 472 ALA ALA A . A 1 473 PRO 473 473 PRO PRO A . A 1 474 VAL 474 474 VAL VAL A . A 1 475 VAL 475 475 VAL VAL A . A 1 476 GLN 476 476 GLN GLN A . A 1 477 GLN 477 477 GLN GLN A . A 1 478 THR 478 478 THR THR A . A 1 479 SER 479 479 SER SER A . A 1 480 ALA 480 480 ALA ALA A . A 1 481 ARG 481 481 ARG ARG A . A 1 482 THR 482 482 THR THR A . A 1 483 THR 483 483 THR THR A . A 1 484 THR 484 484 THR THR A . A 1 485 SER 485 485 SER SER A . A 1 486 ASN 486 486 ASN ASN A . A 1 487 GLY 487 487 GLY GLY A . A 1 488 HIS 488 488 HIS HIS A . A 1 489 ASN 489 489 ASN ASN A . A 1 490 PRO 490 490 PRO PRO A . A 1 491 PHE 491 491 PHE PHE A . A 1 492 ARG 492 492 ARG ARG A . A 1 493 ASN 493 493 ASN ASN A . # # loop_ # #