data_9A35 # _entry.id 9A35 # loop_ _atom_type.symbol C H N O S # loop_ _audit_author.name _audit_author.pdbx_ordinal "Stahl, K." 1 "Graziadei, A." 2 "Dau, T." 3 "Brock, O." 4 "Rappsilber, J." 5 # loop_ _audit_conform.dict_location _audit_conform.dict_name _audit_conform.dict_version https://mmcif.wwpdb.org/dictionaries/ascii/mmcif_ihm_ext.dic mmcif_ihm_ext.dic 1.26 http://mmcif.wwpdb.org/dictionaries/ascii/mmcif_pdbx_v50.dic mmcif_pdbx.dic 5.395 # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB-Dev PDBDEV_00000190 PDBDEV_00000190 ? PDB 9A35 pdb_00009a35 10.2210/pdb9a35/pdb # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 9A35 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2023-02-03 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2023-02-24 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # _ihm_entry_collection.id PDBDEV_G_1000001 _ihm_entry_collection.name . _ihm_entry_collection.details 'Collection of entries belonging to the publication: "Protein structure prediction with in-cell photo-crosslinking mass spectrometry and deep learning"' # _ihm_entry_collection_mapping.collection_id PDBDEV_G_1000001 _ihm_entry_collection_mapping.entry_id 9A35 # loop_ _chem_comp.formula _chem_comp.formula_weight _chem_comp.id _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.type "C3 H7 N O2" 89.094 ALA . ALANINE . "L-peptide linking" "C6 H15 N4 O2 1" 175.212 ARG . ARGININE . "L-peptide linking" "C4 H8 N2 O3" 132.119 ASN . ASPARAGINE . "L-peptide linking" "C4 H7 N O4" 133.103 ASP . "ASPARTIC ACID" . "L-peptide linking" "C3 H7 N O2 S" 121.154 CYS . CYSTEINE . "L-peptide linking" "C5 H10 N2 O3" 146.146 GLN . GLUTAMINE . "L-peptide linking" "C5 H9 N O4" 147.13 GLU . "GLUTAMIC ACID" . "L-peptide linking" "C2 H5 N O2" 75.067 GLY . GLYCINE . "peptide linking" "C6 H10 N3 O2 1" 156.165 HIS . HISTIDINE . "L-peptide linking" "C6 H13 N O2" 131.175 ILE . ISOLEUCINE . "L-peptide linking" "C6 H13 N O2" 131.175 LEU . LEUCINE . "L-peptide linking" "C6 H15 N2 O2 1" 147.198 LYS . LYSINE . "L-peptide linking" "C5 H11 N O2 S" 149.208 MET . METHIONINE . "L-peptide linking" "C9 H11 N O2" 165.192 PHE . PHENYLALANINE . "L-peptide linking" "C5 H9 N O2" 115.132 PRO . PROLINE . "L-peptide linking" "C3 H7 N O3" 105.093 SER . SERINE . "L-peptide linking" "C4 H9 N O3" 119.12 THR . THREONINE . "L-peptide linking" "C11 H12 N2 O2" 204.229 TRP . TRYPTOPHAN . "L-peptide linking" "C9 H11 N O3" 181.191 TYR . TYROSINE . "L-peptide linking" "C5 H11 N O2" 117.148 VAL . VALINE . "L-peptide linking" # _citation.country . _citation.id 1 _citation.journal_abbrev "Nature Biotechnology" _citation.journal_id_ASTM . _citation.journal_id_CSD . _citation.journal_id_ISSN . _citation.journal_issue . _citation.journal_volume . _citation.page_first . _citation.page_last . _citation.pdbx_database_id_DOI 10.1038/s41587-023-01704-z _citation.pdbx_database_id_PubMed 36941363 _citation.title "Protein structure prediction with in-cell photo-crosslinking mass spectrometry and deep learning" _citation.year 2023 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal 1 "Stahl, K." 1 1 "Graziadei, A." 2 1 "Dau, T." 3 1 "Brock, O." 4 1 "Rappsilber, J." 5 # _entity.details . _entity.formula_weight 65837.83 _entity.id 1 _entity.pdbx_description P13035 _entity.pdbx_number_of_molecules 1 _entity.src_method NAT _entity.type polymer # _entity_poly.entity_id 1 _entity_poly.nstd_chirality . _entity_poly.nstd_linkage NO _entity_poly.nstd_monomer NO _entity_poly.pdbx_seq_one_letter_code METKDLIVIGGGINGAGIAADAAGRGLSVLMLEAQDLACATSSASSKLIHGGLRYLEHYEFRLVSEALAEREVLLKMAPHIAFPMRFRLPHRPHLRPAWMIRIGLFMYDHLGKRTSLPGSTGLRFGANSVLKPEIKRGFEYSDCWVDDARLVLANAQMVVRKGGEVLTRTRATSARRENGLWIVEAEDIDTGKKYSWQARGLVNATGPWVKQFFDDGMHLPSPYGIRLIKGSHIVVPRVHTQKQAYILQNEDKRIVFVIPWMDEFSIIGTTDVEYKGDPKAVKIEESEINYLLNVYNTHFKKQLSRDDIVWTYSGVRPLCDDESDSPQAITRDYTLDIHDENGKAPLLSVFGGKLTTYRKLAEHALEKLTPYYQGIGPAWTKESVLPGGAIEGDRDDYAARLRRRYPFLTESLARHYARTYGSNSELLLGNAGTVSDLGEDFGHEFYEAELKYLVDHEWVRRADDALWRRTKQGMWLNADQQSRVSQWLVEYTQQRLSLAS _entity_poly.pdbx_seq_one_letter_code_can METKDLIVIGGGINGAGIAADAAGRGLSVLMLEAQDLACATSSASSKLIHGGLRYLEHYEFRLVSEALAEREVLLKMAPHIAFPMRFRLPHRPHLRPAWMIRIGLFMYDHLGKRTSLPGSTGLRFGANSVLKPEIKRGFEYSDCWVDDARLVLANAQMVVRKGGEVLTRTRATSARRENGLWIVEAEDIDTGKKYSWQARGLVNATGPWVKQFFDDGMHLPSPYGIRLIKGSHIVVPRVHTQKQAYILQNEDKRIVFVIPWMDEFSIIGTTDVEYKGDPKAVKIEESEINYLLNVYNTHFKKQLSRDDIVWTYSGVRPLCDDESDSPQAITRDYTLDIHDENGKAPLLSVFGGKLTTYRKLAEHALEKLTPYYQGIGPAWTKESVLPGGAIEGDRDDYAARLRRRYPFLTESLARHYARTYGSNSELLLGNAGTVSDLGEDFGHEFYEAELKYLVDHEWVRRADDALWRRTKQGMWLNADQQSRVSQWLVEYTQQRLSLAS _entity_poly.pdbx_sequence_evidence_code . _entity_poly.pdbx_strand_id A _entity_poly.type polypeptide(L) # loop_ _entity_poly_seq.entity_id _entity_poly_seq.hetero _entity_poly_seq.mon_id _entity_poly_seq.num 1 . MET 1 1 . GLU 2 1 . THR 3 1 . LYS 4 1 . ASP 5 1 . LEU 6 1 . ILE 7 1 . VAL 8 1 . ILE 9 1 . GLY 10 1 . GLY 11 1 . GLY 12 1 . ILE 13 1 . ASN 14 1 . GLY 15 1 . ALA 16 1 . GLY 17 1 . ILE 18 1 . ALA 19 1 . ALA 20 1 . ASP 21 1 . ALA 22 1 . ALA 23 1 . GLY 24 1 . ARG 25 1 . GLY 26 1 . LEU 27 1 . SER 28 1 . VAL 29 1 . LEU 30 1 . MET 31 1 . LEU 32 1 . GLU 33 1 . ALA 34 1 . GLN 35 1 . ASP 36 1 . LEU 37 1 . ALA 38 1 . CYS 39 1 . ALA 40 1 . THR 41 1 . SER 42 1 . SER 43 1 . ALA 44 1 . SER 45 1 . SER 46 1 . LYS 47 1 . LEU 48 1 . ILE 49 1 . HIS 50 1 . GLY 51 1 . GLY 52 1 . LEU 53 1 . ARG 54 1 . TYR 55 1 . LEU 56 1 . GLU 57 1 . HIS 58 1 . TYR 59 1 . GLU 60 1 . PHE 61 1 . ARG 62 1 . LEU 63 1 . VAL 64 1 . SER 65 1 . GLU 66 1 . ALA 67 1 . LEU 68 1 . ALA 69 1 . GLU 70 1 . ARG 71 1 . GLU 72 1 . VAL 73 1 . LEU 74 1 . LEU 75 1 . LYS 76 1 . MET 77 1 . ALA 78 1 . PRO 79 1 . HIS 80 1 . ILE 81 1 . ALA 82 1 . PHE 83 1 . PRO 84 1 . MET 85 1 . ARG 86 1 . PHE 87 1 . ARG 88 1 . LEU 89 1 . PRO 90 1 . HIS 91 1 . ARG 92 1 . PRO 93 1 . HIS 94 1 . LEU 95 1 . ARG 96 1 . PRO 97 1 . ALA 98 1 . TRP 99 1 . MET 100 1 . ILE 101 1 . ARG 102 1 . ILE 103 1 . GLY 104 1 . LEU 105 1 . PHE 106 1 . MET 107 1 . TYR 108 1 . ASP 109 1 . HIS 110 1 . LEU 111 1 . GLY 112 1 . LYS 113 1 . ARG 114 1 . THR 115 1 . SER 116 1 . LEU 117 1 . PRO 118 1 . GLY 119 1 . SER 120 1 . THR 121 1 . GLY 122 1 . LEU 123 1 . ARG 124 1 . PHE 125 1 . GLY 126 1 . ALA 127 1 . ASN 128 1 . SER 129 1 . VAL 130 1 . LEU 131 1 . LYS 132 1 . PRO 133 1 . GLU 134 1 . ILE 135 1 . LYS 136 1 . ARG 137 1 . GLY 138 1 . PHE 139 1 . GLU 140 1 . TYR 141 1 . SER 142 1 . ASP 143 1 . CYS 144 1 . TRP 145 1 . VAL 146 1 . ASP 147 1 . ASP 148 1 . ALA 149 1 . ARG 150 1 . LEU 151 1 . VAL 152 1 . LEU 153 1 . ALA 154 1 . ASN 155 1 . ALA 156 1 . GLN 157 1 . MET 158 1 . VAL 159 1 . VAL 160 1 . ARG 161 1 . LYS 162 1 . GLY 163 1 . GLY 164 1 . GLU 165 1 . VAL 166 1 . LEU 167 1 . THR 168 1 . ARG 169 1 . THR 170 1 . ARG 171 1 . ALA 172 1 . THR 173 1 . SER 174 1 . ALA 175 1 . ARG 176 1 . ARG 177 1 . GLU 178 1 . ASN 179 1 . GLY 180 1 . LEU 181 1 . TRP 182 1 . ILE 183 1 . VAL 184 1 . GLU 185 1 . ALA 186 1 . GLU 187 1 . ASP 188 1 . ILE 189 1 . ASP 190 1 . THR 191 1 . GLY 192 1 . LYS 193 1 . LYS 194 1 . TYR 195 1 . SER 196 1 . TRP 197 1 . GLN 198 1 . ALA 199 1 . ARG 200 1 . GLY 201 1 . LEU 202 1 . VAL 203 1 . ASN 204 1 . ALA 205 1 . THR 206 1 . GLY 207 1 . PRO 208 1 . TRP 209 1 . VAL 210 1 . LYS 211 1 . GLN 212 1 . PHE 213 1 . PHE 214 1 . ASP 215 1 . ASP 216 1 . GLY 217 1 . MET 218 1 . HIS 219 1 . LEU 220 1 . PRO 221 1 . SER 222 1 . PRO 223 1 . TYR 224 1 . GLY 225 1 . ILE 226 1 . ARG 227 1 . LEU 228 1 . ILE 229 1 . LYS 230 1 . GLY 231 1 . SER 232 1 . HIS 233 1 . ILE 234 1 . VAL 235 1 . VAL 236 1 . PRO 237 1 . ARG 238 1 . VAL 239 1 . HIS 240 1 . THR 241 1 . GLN 242 1 . LYS 243 1 . GLN 244 1 . ALA 245 1 . TYR 246 1 . ILE 247 1 . LEU 248 1 . GLN 249 1 . ASN 250 1 . GLU 251 1 . ASP 252 1 . LYS 253 1 . ARG 254 1 . ILE 255 1 . VAL 256 1 . PHE 257 1 . VAL 258 1 . ILE 259 1 . PRO 260 1 . TRP 261 1 . MET 262 1 . ASP 263 1 . GLU 264 1 . PHE 265 1 . SER 266 1 . ILE 267 1 . ILE 268 1 . GLY 269 1 . THR 270 1 . THR 271 1 . ASP 272 1 . VAL 273 1 . GLU 274 1 . TYR 275 1 . LYS 276 1 . GLY 277 1 . ASP 278 1 . PRO 279 1 . LYS 280 1 . ALA 281 1 . VAL 282 1 . LYS 283 1 . ILE 284 1 . GLU 285 1 . GLU 286 1 . SER 287 1 . GLU 288 1 . ILE 289 1 . ASN 290 1 . TYR 291 1 . LEU 292 1 . LEU 293 1 . ASN 294 1 . VAL 295 1 . TYR 296 1 . ASN 297 1 . THR 298 1 . HIS 299 1 . PHE 300 1 . LYS 301 1 . LYS 302 1 . GLN 303 1 . LEU 304 1 . SER 305 1 . ARG 306 1 . ASP 307 1 . ASP 308 1 . ILE 309 1 . VAL 310 1 . TRP 311 1 . THR 312 1 . TYR 313 1 . SER 314 1 . GLY 315 1 . VAL 316 1 . ARG 317 1 . PRO 318 1 . LEU 319 1 . CYS 320 1 . ASP 321 1 . ASP 322 1 . GLU 323 1 . SER 324 1 . ASP 325 1 . SER 326 1 . PRO 327 1 . GLN 328 1 . ALA 329 1 . ILE 330 1 . THR 331 1 . ARG 332 1 . ASP 333 1 . TYR 334 1 . THR 335 1 . LEU 336 1 . ASP 337 1 . ILE 338 1 . HIS 339 1 . ASP 340 1 . GLU 341 1 . ASN 342 1 . GLY 343 1 . LYS 344 1 . ALA 345 1 . PRO 346 1 . LEU 347 1 . LEU 348 1 . SER 349 1 . VAL 350 1 . PHE 351 1 . GLY 352 1 . GLY 353 1 . LYS 354 1 . LEU 355 1 . THR 356 1 . THR 357 1 . TYR 358 1 . ARG 359 1 . LYS 360 1 . LEU 361 1 . ALA 362 1 . GLU 363 1 . HIS 364 1 . ALA 365 1 . LEU 366 1 . GLU 367 1 . LYS 368 1 . LEU 369 1 . THR 370 1 . PRO 371 1 . TYR 372 1 . TYR 373 1 . GLN 374 1 . GLY 375 1 . ILE 376 1 . GLY 377 1 . PRO 378 1 . ALA 379 1 . TRP 380 1 . THR 381 1 . LYS 382 1 . GLU 383 1 . SER 384 1 . VAL 385 1 . LEU 386 1 . PRO 387 1 . GLY 388 1 . GLY 389 1 . ALA 390 1 . ILE 391 1 . GLU 392 1 . GLY 393 1 . ASP 394 1 . ARG 395 1 . ASP 396 1 . ASP 397 1 . TYR 398 1 . ALA 399 1 . ALA 400 1 . ARG 401 1 . LEU 402 1 . ARG 403 1 . ARG 404 1 . ARG 405 1 . TYR 406 1 . PRO 407 1 . PHE 408 1 . LEU 409 1 . THR 410 1 . GLU 411 1 . SER 412 1 . LEU 413 1 . ALA 414 1 . ARG 415 1 . HIS 416 1 . TYR 417 1 . ALA 418 1 . ARG 419 1 . THR 420 1 . TYR 421 1 . GLY 422 1 . SER 423 1 . ASN 424 1 . SER 425 1 . GLU 426 1 . LEU 427 1 . LEU 428 1 . LEU 429 1 . GLY 430 1 . ASN 431 1 . ALA 432 1 . GLY 433 1 . THR 434 1 . VAL 435 1 . SER 436 1 . ASP 437 1 . LEU 438 1 . GLY 439 1 . GLU 440 1 . ASP 441 1 . PHE 442 1 . GLY 443 1 . HIS 444 1 . GLU 445 1 . PHE 446 1 . TYR 447 1 . GLU 448 1 . ALA 449 1 . GLU 450 1 . LEU 451 1 . LYS 452 1 . TYR 453 1 . LEU 454 1 . VAL 455 1 . ASP 456 1 . HIS 457 1 . GLU 458 1 . TRP 459 1 . VAL 460 1 . ARG 461 1 . ARG 462 1 . ALA 463 1 . ASP 464 1 . ASP 465 1 . ALA 466 1 . LEU 467 1 . TRP 468 1 . ARG 469 1 . ARG 470 1 . THR 471 1 . LYS 472 1 . GLN 473 1 . GLY 474 1 . MET 475 1 . TRP 476 1 . LEU 477 1 . ASN 478 1 . ALA 479 1 . ASP 480 1 . GLN 481 1 . GLN 482 1 . SER 483 1 . ARG 484 1 . VAL 485 1 . SER 486 1 . GLN 487 1 . TRP 488 1 . LEU 489 1 . VAL 490 1 . GLU 491 1 . TYR 492 1 . THR 493 1 . GLN 494 1 . GLN 495 1 . ARG 496 1 . LEU 497 1 . SER 498 1 . LEU 499 1 . ALA 500 1 . SER 501 # _ihm_chemical_component_descriptor.auth_name L-Photo-Leucine _ihm_chemical_component_descriptor.chemical_name . _ihm_chemical_component_descriptor.common_name L-Photo-Leucine _ihm_chemical_component_descriptor.details . _ihm_chemical_component_descriptor.id 1 _ihm_chemical_component_descriptor.inchi 1S/C5H9N3O2/c1-5(7-8-5)2-3(6)4(9)10/h3H,2,6H2,1H3,(H,9,10)/t3-/m0/s1 _ihm_chemical_component_descriptor.inchi_key MJRDGTVDJKACQZ-VKHMYHEASA-N _ihm_chemical_component_descriptor.smiles CC1(C[C@H](N)C(O)=O)N=N1 _ihm_chemical_component_descriptor.smiles_canonical . # loop_ _ihm_cross_link_list.comp_id_1 _ihm_cross_link_list.comp_id_2 _ihm_cross_link_list.dataset_list_id _ihm_cross_link_list.details _ihm_cross_link_list.entity_description_1 _ihm_cross_link_list.entity_description_2 _ihm_cross_link_list.entity_id_1 _ihm_cross_link_list.entity_id_2 _ihm_cross_link_list.group_id _ihm_cross_link_list.id _ihm_cross_link_list.linker_chem_comp_descriptor_id _ihm_cross_link_list.linker_type _ihm_cross_link_list.seq_id_1 _ihm_cross_link_list.seq_id_2 LEU TYR 1 . P13035 P13035 1 1 1 1 1 L-Photo-Leucine 63 334 VAL LEU 1 . P13035 P13035 1 1 2 2 1 L-Photo-Leucine 73 117 LEU MET 1 . P13035 P13035 1 1 3 3 1 L-Photo-Leucine 68 107 LEU LEU 1 . P13035 P13035 1 1 4 4 1 L-Photo-Leucine 74 117 # loop_ _ihm_cross_link_restraint.asym_id_1 _ihm_cross_link_restraint.asym_id_2 _ihm_cross_link_restraint.atom_id_1 _ihm_cross_link_restraint.atom_id_2 _ihm_cross_link_restraint.comp_id_1 _ihm_cross_link_restraint.comp_id_2 _ihm_cross_link_restraint.conditional_crosslink_flag _ihm_cross_link_restraint.distance_threshold _ihm_cross_link_restraint.entity_id_1 _ihm_cross_link_restraint.entity_id_2 _ihm_cross_link_restraint.group_id _ihm_cross_link_restraint.id _ihm_cross_link_restraint.model_granularity _ihm_cross_link_restraint.pseudo_site_flag _ihm_cross_link_restraint.psi _ihm_cross_link_restraint.restraint_type _ihm_cross_link_restraint.seq_id_1 _ihm_cross_link_restraint.seq_id_2 _ihm_cross_link_restraint.sigma_1 _ihm_cross_link_restraint.sigma_2 A A . . LEU TYR . 10 1 1 1 1 by-residue NO 0.05 "upper bound" 63 334 . . A A . . VAL LEU . 10 1 1 2 2 by-residue NO 0.05 "upper bound" 73 117 . . A A . . LEU MET . 10 1 1 3 3 by-residue NO 0.05 "upper bound" 68 107 . . A A . . LEU LEU . 10 1 1 4 4 by-residue NO 0.05 "upper bound" 74 117 . . # _ihm_dataset_group.application . _ihm_dataset_group.details . _ihm_dataset_group.id 1 _ihm_dataset_group.name . # _ihm_dataset_group_link.dataset_list_id 1 _ihm_dataset_group_link.group_id 1 # _ihm_dataset_list.data_type "Crosslinking-MS data" _ihm_dataset_list.database_hosted YES _ihm_dataset_list.details . _ihm_dataset_list.id 1 # _ihm_dataset_related_db_reference.accession_code JPST001851 _ihm_dataset_related_db_reference.dataset_list_id 1 _ihm_dataset_related_db_reference.db_name jPOSTrepo _ihm_dataset_related_db_reference.details . _ihm_dataset_related_db_reference.id 1 _ihm_dataset_related_db_reference.version . # _ihm_entity_poly_segment.comp_id_begin MET _ihm_entity_poly_segment.comp_id_end SER _ihm_entity_poly_segment.entity_id 1 _ihm_entity_poly_segment.id 1 _ihm_entity_poly_segment.seq_id_begin 1 _ihm_entity_poly_segment.seq_id_end 501 # _ihm_model_group.details . _ihm_model_group.id 1 _ihm_model_group.name . # loop_ _ihm_model_group_link.group_id _ihm_model_group_link.model_id 1 1 1 2 1 3 1 4 1 5 1 6 1 7 1 8 1 9 1 10 # loop_ _ihm_model_list.assembly_id _ihm_model_list.model_id _ihm_model_list.model_name _ihm_model_list.protocol_id _ihm_model_list.representation_id 1 1 . 1 1 1 2 . 1 1 1 3 . 1 1 1 4 . 1 1 1 5 . 1 1 1 6 . 1 1 1 7 . 1 1 1 8 . 1 1 1 9 . 1 1 1 10 . 1 1 # _ihm_model_representation.details . _ihm_model_representation.id 1 _ihm_model_representation.name . # _ihm_model_representation_details.description . _ihm_model_representation_details.entity_asym_id A _ihm_model_representation_details.entity_description P13035 _ihm_model_representation_details.entity_id 1 _ihm_model_representation_details.entity_poly_segment_id 1 _ihm_model_representation_details.id 1 _ihm_model_representation_details.model_granularity by-atom _ihm_model_representation_details.model_mode flexible _ihm_model_representation_details.model_object_count . _ihm_model_representation_details.model_object_primitive atomistic _ihm_model_representation_details.representation_id 1 _ihm_model_representation_details.starting_model_id . # _ihm_modeling_protocol.details . _ihm_modeling_protocol.id 1 _ihm_modeling_protocol.num_steps 1 _ihm_modeling_protocol.protocol_name AlphaLink # _ihm_modeling_protocol_details.dataset_group_id 1 _ihm_modeling_protocol_details.description . _ihm_modeling_protocol_details.ensemble_flag YES _ihm_modeling_protocol_details.id 1 _ihm_modeling_protocol_details.multi_scale_flag NO _ihm_modeling_protocol_details.multi_state_flag NO _ihm_modeling_protocol_details.num_models_begin 0 _ihm_modeling_protocol_details.num_models_end 10 _ihm_modeling_protocol_details.ordered_flag NO _ihm_modeling_protocol_details.protocol_id 1 _ihm_modeling_protocol_details.script_file_id . _ihm_modeling_protocol_details.software_id . _ihm_modeling_protocol_details.step_id 1 _ihm_modeling_protocol_details.step_method "AlphaLink with 10 msa subsamples" _ihm_modeling_protocol_details.step_name AlphaLink _ihm_modeling_protocol_details.struct_assembly_description . _ihm_modeling_protocol_details.struct_assembly_id 1 # _ihm_struct_assembly.description "Integrative modeling using in-cell photo-crosslinking mass spectrometry and deep learning" _ihm_struct_assembly.id 1 _ihm_struct_assembly.name "Integrative model" # _ihm_struct_assembly_details.assembly_id 1 _ihm_struct_assembly_details.asym_id A _ihm_struct_assembly_details.entity_description P13035 _ihm_struct_assembly_details.entity_id 1 _ihm_struct_assembly_details.entity_poly_segment_id 1 _ihm_struct_assembly_details.id 1 _ihm_struct_assembly_details.parent_assembly_id 1 # _software.citation_id 1 _software.classification "model building" _software.description "protein structure prediction by deep learning assisted by experimental distance restraints" _software.location https://github.com/lhatsk/AlphaLink _software.name AlphaLink _software.pdbx_ordinal 1 _software.type program _software.version 1.0 # _struct.entry_id 9A35 _struct.pdbx_CASP_flag . _struct.pdbx_descriptor . _struct.pdbx_details . _struct.pdbx_model_details . _struct.pdbx_model_type_details . _struct.title "Model of E. coli GlpD by in-cell photo-crosslinking MS and deep learning" _struct.pdbx_structure_determination_methodology integrative # _struct_asym.details P13035 _struct_asym.entity_id 1 _struct_asym.id A _struct_asym.pdbx_PDB_id . _struct_asym.pdbx_alt_id . _struct_asym.pdbx_blank_PDB_chainid_flag . _struct_asym.pdbx_modified . _struct_asym.pdbx_order . _struct_asym.pdbx_type . # _struct_ref.db_code GLPD_ECOLI _struct_ref.db_name UNP _struct_ref.details "Aerobic glycerol-3-phosphate dehydrogenase OS=Escherichia coli (strain K12) OX=83333 GN=glpD PE=1 SV=3" _struct_ref.entity_id 1 _struct_ref.id 1 _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_accession P13035 _struct_ref.pdbx_seq_one_letter_code METKDLIVIGGGINGAGIAADAAGRGLSVLMLEAQDLACATSSASSKLIHGGLRYLEHYEFRLVSEALAEREVLLKMAPHIAFPMRFRLPHRPHLRPAWMIRIGLFMYDHLGKRTSLPGSTGLRFGANSVLKPEIKRGFEYSDCWVDDARLVLANAQMVVRKGGEVLTRTRATSARRENGLWIVEAEDIDTGKKYSWQARGLVNATGPWVKQFFDDGMHLPSPYGIRLIKGSHIVVPRVHTQKQAYILQNEDKRIVFVIPWMDEFSIIGTTDVEYKGDPKAVKIEESEINYLLNVYNTHFKKQLSRDDIVWTYSGVRPLCDDESDSPQAITRDYTLDIHDENGKAPLLSVFGGKLTTYRKLAEHALEKLTPYYQGIGPAWTKESVLPGGAIEGDRDDYAARLRRRYPFLTESLARHYARTYGSNSELLLGNAGTVSDLGEDFGHEFYEAELKYLVDHEWVRRADDALWRRTKQGMWLNADQQSRVSQWLVEYTQQRLSLAS # _struct_ref_seq.align_id 1 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.db_align_end 501 _struct_ref_seq.ref_id 1 _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.seq_align_end 501 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code A 1 1 MET 1 1 MET MET A . A 1 2 GLU 2 2 GLU GLU A . A 1 3 THR 3 3 THR THR A . A 1 4 LYS 4 4 LYS LYS A . A 1 5 ASP 5 5 ASP ASP A . A 1 6 LEU 6 6 LEU LEU A . A 1 7 ILE 7 7 ILE ILE A . A 1 8 VAL 8 8 VAL VAL A . A 1 9 ILE 9 9 ILE ILE A . A 1 10 GLY 10 10 GLY GLY A . A 1 11 GLY 11 11 GLY GLY A . A 1 12 GLY 12 12 GLY GLY A . A 1 13 ILE 13 13 ILE ILE A . A 1 14 ASN 14 14 ASN ASN A . A 1 15 GLY 15 15 GLY GLY A . A 1 16 ALA 16 16 ALA ALA A . A 1 17 GLY 17 17 GLY GLY A . A 1 18 ILE 18 18 ILE ILE A . A 1 19 ALA 19 19 ALA ALA A . A 1 20 ALA 20 20 ALA ALA A . A 1 21 ASP 21 21 ASP ASP A . A 1 22 ALA 22 22 ALA ALA A . A 1 23 ALA 23 23 ALA ALA A . A 1 24 GLY 24 24 GLY GLY A . A 1 25 ARG 25 25 ARG ARG A . A 1 26 GLY 26 26 GLY GLY A . A 1 27 LEU 27 27 LEU LEU A . A 1 28 SER 28 28 SER SER A . A 1 29 VAL 29 29 VAL VAL A . A 1 30 LEU 30 30 LEU LEU A . A 1 31 MET 31 31 MET MET A . A 1 32 LEU 32 32 LEU LEU A . A 1 33 GLU 33 33 GLU GLU A . A 1 34 ALA 34 34 ALA ALA A . A 1 35 GLN 35 35 GLN GLN A . A 1 36 ASP 36 36 ASP ASP A . A 1 37 LEU 37 37 LEU LEU A . A 1 38 ALA 38 38 ALA ALA A . A 1 39 CYS 39 39 CYS CYS A . A 1 40 ALA 40 40 ALA ALA A . A 1 41 THR 41 41 THR THR A . A 1 42 SER 42 42 SER SER A . A 1 43 SER 43 43 SER SER A . A 1 44 ALA 44 44 ALA ALA A . A 1 45 SER 45 45 SER SER A . A 1 46 SER 46 46 SER SER A . A 1 47 LYS 47 47 LYS LYS A . A 1 48 LEU 48 48 LEU LEU A . A 1 49 ILE 49 49 ILE ILE A . A 1 50 HIS 50 50 HIS HIS A . A 1 51 GLY 51 51 GLY GLY A . A 1 52 GLY 52 52 GLY GLY A . A 1 53 LEU 53 53 LEU LEU A . A 1 54 ARG 54 54 ARG ARG A . A 1 55 TYR 55 55 TYR TYR A . A 1 56 LEU 56 56 LEU LEU A . A 1 57 GLU 57 57 GLU GLU A . A 1 58 HIS 58 58 HIS HIS A . A 1 59 TYR 59 59 TYR TYR A . A 1 60 GLU 60 60 GLU GLU A . A 1 61 PHE 61 61 PHE PHE A . A 1 62 ARG 62 62 ARG ARG A . A 1 63 LEU 63 63 LEU LEU A . A 1 64 VAL 64 64 VAL VAL A . A 1 65 SER 65 65 SER SER A . A 1 66 GLU 66 66 GLU GLU A . A 1 67 ALA 67 67 ALA ALA A . A 1 68 LEU 68 68 LEU LEU A . A 1 69 ALA 69 69 ALA ALA A . A 1 70 GLU 70 70 GLU GLU A . A 1 71 ARG 71 71 ARG ARG A . A 1 72 GLU 72 72 GLU GLU A . A 1 73 VAL 73 73 VAL VAL A . A 1 74 LEU 74 74 LEU LEU A . A 1 75 LEU 75 75 LEU LEU A . A 1 76 LYS 76 76 LYS LYS A . A 1 77 MET 77 77 MET MET A . A 1 78 ALA 78 78 ALA ALA A . A 1 79 PRO 79 79 PRO PRO A . A 1 80 HIS 80 80 HIS HIS A . A 1 81 ILE 81 81 ILE ILE A . A 1 82 ALA 82 82 ALA ALA A . A 1 83 PHE 83 83 PHE PHE A . A 1 84 PRO 84 84 PRO PRO A . A 1 85 MET 85 85 MET MET A . A 1 86 ARG 86 86 ARG ARG A . A 1 87 PHE 87 87 PHE PHE A . A 1 88 ARG 88 88 ARG ARG A . A 1 89 LEU 89 89 LEU LEU A . A 1 90 PRO 90 90 PRO PRO A . A 1 91 HIS 91 91 HIS HIS A . A 1 92 ARG 92 92 ARG ARG A . A 1 93 PRO 93 93 PRO PRO A . A 1 94 HIS 94 94 HIS HIS A . A 1 95 LEU 95 95 LEU LEU A . A 1 96 ARG 96 96 ARG ARG A . A 1 97 PRO 97 97 PRO PRO A . A 1 98 ALA 98 98 ALA ALA A . A 1 99 TRP 99 99 TRP TRP A . A 1 100 MET 100 100 MET MET A . A 1 101 ILE 101 101 ILE ILE A . A 1 102 ARG 102 102 ARG ARG A . A 1 103 ILE 103 103 ILE ILE A . A 1 104 GLY 104 104 GLY GLY A . A 1 105 LEU 105 105 LEU LEU A . A 1 106 PHE 106 106 PHE PHE A . A 1 107 MET 107 107 MET MET A . A 1 108 TYR 108 108 TYR TYR A . A 1 109 ASP 109 109 ASP ASP A . A 1 110 HIS 110 110 HIS HIS A . A 1 111 LEU 111 111 LEU LEU A . A 1 112 GLY 112 112 GLY GLY A . A 1 113 LYS 113 113 LYS LYS A . A 1 114 ARG 114 114 ARG ARG A . A 1 115 THR 115 115 THR THR A . A 1 116 SER 116 116 SER SER A . A 1 117 LEU 117 117 LEU LEU A . A 1 118 PRO 118 118 PRO PRO A . A 1 119 GLY 119 119 GLY GLY A . A 1 120 SER 120 120 SER SER A . A 1 121 THR 121 121 THR THR A . A 1 122 GLY 122 122 GLY GLY A . A 1 123 LEU 123 123 LEU LEU A . A 1 124 ARG 124 124 ARG ARG A . A 1 125 PHE 125 125 PHE PHE A . A 1 126 GLY 126 126 GLY GLY A . A 1 127 ALA 127 127 ALA ALA A . A 1 128 ASN 128 128 ASN ASN A . A 1 129 SER 129 129 SER SER A . A 1 130 VAL 130 130 VAL VAL A . A 1 131 LEU 131 131 LEU LEU A . A 1 132 LYS 132 132 LYS LYS A . A 1 133 PRO 133 133 PRO PRO A . A 1 134 GLU 134 134 GLU GLU A . A 1 135 ILE 135 135 ILE ILE A . A 1 136 LYS 136 136 LYS LYS A . A 1 137 ARG 137 137 ARG ARG A . A 1 138 GLY 138 138 GLY GLY A . A 1 139 PHE 139 139 PHE PHE A . A 1 140 GLU 140 140 GLU GLU A . A 1 141 TYR 141 141 TYR TYR A . A 1 142 SER 142 142 SER SER A . A 1 143 ASP 143 143 ASP ASP A . A 1 144 CYS 144 144 CYS CYS A . A 1 145 TRP 145 145 TRP TRP A . A 1 146 VAL 146 146 VAL VAL A . A 1 147 ASP 147 147 ASP ASP A . A 1 148 ASP 148 148 ASP ASP A . A 1 149 ALA 149 149 ALA ALA A . A 1 150 ARG 150 150 ARG ARG A . A 1 151 LEU 151 151 LEU LEU A . A 1 152 VAL 152 152 VAL VAL A . A 1 153 LEU 153 153 LEU LEU A . A 1 154 ALA 154 154 ALA ALA A . A 1 155 ASN 155 155 ASN ASN A . A 1 156 ALA 156 156 ALA ALA A . A 1 157 GLN 157 157 GLN GLN A . A 1 158 MET 158 158 MET MET A . A 1 159 VAL 159 159 VAL VAL A . A 1 160 VAL 160 160 VAL VAL A . A 1 161 ARG 161 161 ARG ARG A . A 1 162 LYS 162 162 LYS LYS A . A 1 163 GLY 163 163 GLY GLY A . A 1 164 GLY 164 164 GLY GLY A . A 1 165 GLU 165 165 GLU GLU A . A 1 166 VAL 166 166 VAL VAL A . A 1 167 LEU 167 167 LEU LEU A . A 1 168 THR 168 168 THR THR A . A 1 169 ARG 169 169 ARG ARG A . A 1 170 THR 170 170 THR THR A . A 1 171 ARG 171 171 ARG ARG A . A 1 172 ALA 172 172 ALA ALA A . A 1 173 THR 173 173 THR THR A . A 1 174 SER 174 174 SER SER A . A 1 175 ALA 175 175 ALA ALA A . A 1 176 ARG 176 176 ARG ARG A . A 1 177 ARG 177 177 ARG ARG A . A 1 178 GLU 178 178 GLU GLU A . A 1 179 ASN 179 179 ASN ASN A . A 1 180 GLY 180 180 GLY GLY A . A 1 181 LEU 181 181 LEU LEU A . A 1 182 TRP 182 182 TRP TRP A . A 1 183 ILE 183 183 ILE ILE A . A 1 184 VAL 184 184 VAL VAL A . A 1 185 GLU 185 185 GLU GLU A . A 1 186 ALA 186 186 ALA ALA A . A 1 187 GLU 187 187 GLU GLU A . A 1 188 ASP 188 188 ASP ASP A . A 1 189 ILE 189 189 ILE ILE A . A 1 190 ASP 190 190 ASP ASP A . A 1 191 THR 191 191 THR THR A . A 1 192 GLY 192 192 GLY GLY A . A 1 193 LYS 193 193 LYS LYS A . A 1 194 LYS 194 194 LYS LYS A . A 1 195 TYR 195 195 TYR TYR A . A 1 196 SER 196 196 SER SER A . A 1 197 TRP 197 197 TRP TRP A . A 1 198 GLN 198 198 GLN GLN A . A 1 199 ALA 199 199 ALA ALA A . A 1 200 ARG 200 200 ARG ARG A . A 1 201 GLY 201 201 GLY GLY A . A 1 202 LEU 202 202 LEU LEU A . A 1 203 VAL 203 203 VAL VAL A . A 1 204 ASN 204 204 ASN ASN A . A 1 205 ALA 205 205 ALA ALA A . A 1 206 THR 206 206 THR THR A . A 1 207 GLY 207 207 GLY GLY A . A 1 208 PRO 208 208 PRO PRO A . A 1 209 TRP 209 209 TRP TRP A . A 1 210 VAL 210 210 VAL VAL A . A 1 211 LYS 211 211 LYS LYS A . A 1 212 GLN 212 212 GLN GLN A . A 1 213 PHE 213 213 PHE PHE A . A 1 214 PHE 214 214 PHE PHE A . A 1 215 ASP 215 215 ASP ASP A . A 1 216 ASP 216 216 ASP ASP A . A 1 217 GLY 217 217 GLY GLY A . A 1 218 MET 218 218 MET MET A . A 1 219 HIS 219 219 HIS HIS A . A 1 220 LEU 220 220 LEU LEU A . A 1 221 PRO 221 221 PRO PRO A . A 1 222 SER 222 222 SER SER A . A 1 223 PRO 223 223 PRO PRO A . A 1 224 TYR 224 224 TYR TYR A . A 1 225 GLY 225 225 GLY GLY A . A 1 226 ILE 226 226 ILE ILE A . A 1 227 ARG 227 227 ARG ARG A . A 1 228 LEU 228 228 LEU LEU A . A 1 229 ILE 229 229 ILE ILE A . A 1 230 LYS 230 230 LYS LYS A . A 1 231 GLY 231 231 GLY GLY A . A 1 232 SER 232 232 SER SER A . A 1 233 HIS 233 233 HIS HIS A . A 1 234 ILE 234 234 ILE ILE A . A 1 235 VAL 235 235 VAL VAL A . A 1 236 VAL 236 236 VAL VAL A . A 1 237 PRO 237 237 PRO PRO A . A 1 238 ARG 238 238 ARG ARG A . A 1 239 VAL 239 239 VAL VAL A . A 1 240 HIS 240 240 HIS HIS A . A 1 241 THR 241 241 THR THR A . A 1 242 GLN 242 242 GLN GLN A . A 1 243 LYS 243 243 LYS LYS A . A 1 244 GLN 244 244 GLN GLN A . A 1 245 ALA 245 245 ALA ALA A . A 1 246 TYR 246 246 TYR TYR A . A 1 247 ILE 247 247 ILE ILE A . A 1 248 LEU 248 248 LEU LEU A . A 1 249 GLN 249 249 GLN GLN A . A 1 250 ASN 250 250 ASN ASN A . A 1 251 GLU 251 251 GLU GLU A . A 1 252 ASP 252 252 ASP ASP A . A 1 253 LYS 253 253 LYS LYS A . A 1 254 ARG 254 254 ARG ARG A . A 1 255 ILE 255 255 ILE ILE A . A 1 256 VAL 256 256 VAL VAL A . A 1 257 PHE 257 257 PHE PHE A . A 1 258 VAL 258 258 VAL VAL A . A 1 259 ILE 259 259 ILE ILE A . A 1 260 PRO 260 260 PRO PRO A . A 1 261 TRP 261 261 TRP TRP A . A 1 262 MET 262 262 MET MET A . A 1 263 ASP 263 263 ASP ASP A . A 1 264 GLU 264 264 GLU GLU A . A 1 265 PHE 265 265 PHE PHE A . A 1 266 SER 266 266 SER SER A . A 1 267 ILE 267 267 ILE ILE A . A 1 268 ILE 268 268 ILE ILE A . A 1 269 GLY 269 269 GLY GLY A . A 1 270 THR 270 270 THR THR A . A 1 271 THR 271 271 THR THR A . A 1 272 ASP 272 272 ASP ASP A . A 1 273 VAL 273 273 VAL VAL A . A 1 274 GLU 274 274 GLU GLU A . A 1 275 TYR 275 275 TYR TYR A . A 1 276 LYS 276 276 LYS LYS A . A 1 277 GLY 277 277 GLY GLY A . A 1 278 ASP 278 278 ASP ASP A . A 1 279 PRO 279 279 PRO PRO A . A 1 280 LYS 280 280 LYS LYS A . A 1 281 ALA 281 281 ALA ALA A . A 1 282 VAL 282 282 VAL VAL A . A 1 283 LYS 283 283 LYS LYS A . A 1 284 ILE 284 284 ILE ILE A . A 1 285 GLU 285 285 GLU GLU A . A 1 286 GLU 286 286 GLU GLU A . A 1 287 SER 287 287 SER SER A . A 1 288 GLU 288 288 GLU GLU A . A 1 289 ILE 289 289 ILE ILE A . A 1 290 ASN 290 290 ASN ASN A . A 1 291 TYR 291 291 TYR TYR A . A 1 292 LEU 292 292 LEU LEU A . A 1 293 LEU 293 293 LEU LEU A . A 1 294 ASN 294 294 ASN ASN A . A 1 295 VAL 295 295 VAL VAL A . A 1 296 TYR 296 296 TYR TYR A . A 1 297 ASN 297 297 ASN ASN A . A 1 298 THR 298 298 THR THR A . A 1 299 HIS 299 299 HIS HIS A . A 1 300 PHE 300 300 PHE PHE A . A 1 301 LYS 301 301 LYS LYS A . A 1 302 LYS 302 302 LYS LYS A . A 1 303 GLN 303 303 GLN GLN A . A 1 304 LEU 304 304 LEU LEU A . A 1 305 SER 305 305 SER SER A . A 1 306 ARG 306 306 ARG ARG A . A 1 307 ASP 307 307 ASP ASP A . A 1 308 ASP 308 308 ASP ASP A . A 1 309 ILE 309 309 ILE ILE A . A 1 310 VAL 310 310 VAL VAL A . A 1 311 TRP 311 311 TRP TRP A . A 1 312 THR 312 312 THR THR A . A 1 313 TYR 313 313 TYR TYR A . A 1 314 SER 314 314 SER SER A . A 1 315 GLY 315 315 GLY GLY A . A 1 316 VAL 316 316 VAL VAL A . A 1 317 ARG 317 317 ARG ARG A . A 1 318 PRO 318 318 PRO PRO A . A 1 319 LEU 319 319 LEU LEU A . A 1 320 CYS 320 320 CYS CYS A . A 1 321 ASP 321 321 ASP ASP A . A 1 322 ASP 322 322 ASP ASP A . A 1 323 GLU 323 323 GLU GLU A . A 1 324 SER 324 324 SER SER A . A 1 325 ASP 325 325 ASP ASP A . A 1 326 SER 326 326 SER SER A . A 1 327 PRO 327 327 PRO PRO A . A 1 328 GLN 328 328 GLN GLN A . A 1 329 ALA 329 329 ALA ALA A . A 1 330 ILE 330 330 ILE ILE A . A 1 331 THR 331 331 THR THR A . A 1 332 ARG 332 332 ARG ARG A . A 1 333 ASP 333 333 ASP ASP A . A 1 334 TYR 334 334 TYR TYR A . A 1 335 THR 335 335 THR THR A . A 1 336 LEU 336 336 LEU LEU A . A 1 337 ASP 337 337 ASP ASP A . A 1 338 ILE 338 338 ILE ILE A . A 1 339 HIS 339 339 HIS HIS A . A 1 340 ASP 340 340 ASP ASP A . A 1 341 GLU 341 341 GLU GLU A . A 1 342 ASN 342 342 ASN ASN A . A 1 343 GLY 343 343 GLY GLY A . A 1 344 LYS 344 344 LYS LYS A . A 1 345 ALA 345 345 ALA ALA A . A 1 346 PRO 346 346 PRO PRO A . A 1 347 LEU 347 347 LEU LEU A . A 1 348 LEU 348 348 LEU LEU A . A 1 349 SER 349 349 SER SER A . A 1 350 VAL 350 350 VAL VAL A . A 1 351 PHE 351 351 PHE PHE A . A 1 352 GLY 352 352 GLY GLY A . A 1 353 GLY 353 353 GLY GLY A . A 1 354 LYS 354 354 LYS LYS A . A 1 355 LEU 355 355 LEU LEU A . A 1 356 THR 356 356 THR THR A . A 1 357 THR 357 357 THR THR A . A 1 358 TYR 358 358 TYR TYR A . A 1 359 ARG 359 359 ARG ARG A . A 1 360 LYS 360 360 LYS LYS A . A 1 361 LEU 361 361 LEU LEU A . A 1 362 ALA 362 362 ALA ALA A . A 1 363 GLU 363 363 GLU GLU A . A 1 364 HIS 364 364 HIS HIS A . A 1 365 ALA 365 365 ALA ALA A . A 1 366 LEU 366 366 LEU LEU A . A 1 367 GLU 367 367 GLU GLU A . A 1 368 LYS 368 368 LYS LYS A . A 1 369 LEU 369 369 LEU LEU A . A 1 370 THR 370 370 THR THR A . A 1 371 PRO 371 371 PRO PRO A . A 1 372 TYR 372 372 TYR TYR A . A 1 373 TYR 373 373 TYR TYR A . A 1 374 GLN 374 374 GLN GLN A . A 1 375 GLY 375 375 GLY GLY A . A 1 376 ILE 376 376 ILE ILE A . A 1 377 GLY 377 377 GLY GLY A . A 1 378 PRO 378 378 PRO PRO A . A 1 379 ALA 379 379 ALA ALA A . A 1 380 TRP 380 380 TRP TRP A . A 1 381 THR 381 381 THR THR A . A 1 382 LYS 382 382 LYS LYS A . A 1 383 GLU 383 383 GLU GLU A . A 1 384 SER 384 384 SER SER A . A 1 385 VAL 385 385 VAL VAL A . A 1 386 LEU 386 386 LEU LEU A . A 1 387 PRO 387 387 PRO PRO A . A 1 388 GLY 388 388 GLY GLY A . A 1 389 GLY 389 389 GLY GLY A . A 1 390 ALA 390 390 ALA ALA A . A 1 391 ILE 391 391 ILE ILE A . A 1 392 GLU 392 392 GLU GLU A . A 1 393 GLY 393 393 GLY GLY A . A 1 394 ASP 394 394 ASP ASP A . A 1 395 ARG 395 395 ARG ARG A . A 1 396 ASP 396 396 ASP ASP A . A 1 397 ASP 397 397 ASP ASP A . A 1 398 TYR 398 398 TYR TYR A . A 1 399 ALA 399 399 ALA ALA A . A 1 400 ALA 400 400 ALA ALA A . A 1 401 ARG 401 401 ARG ARG A . A 1 402 LEU 402 402 LEU LEU A . A 1 403 ARG 403 403 ARG ARG A . A 1 404 ARG 404 404 ARG ARG A . A 1 405 ARG 405 405 ARG ARG A . A 1 406 TYR 406 406 TYR TYR A . A 1 407 PRO 407 407 PRO PRO A . A 1 408 PHE 408 408 PHE PHE A . A 1 409 LEU 409 409 LEU LEU A . A 1 410 THR 410 410 THR THR A . A 1 411 GLU 411 411 GLU GLU A . A 1 412 SER 412 412 SER SER A . A 1 413 LEU 413 413 LEU LEU A . A 1 414 ALA 414 414 ALA ALA A . A 1 415 ARG 415 415 ARG ARG A . A 1 416 HIS 416 416 HIS HIS A . A 1 417 TYR 417 417 TYR TYR A . A 1 418 ALA 418 418 ALA ALA A . A 1 419 ARG 419 419 ARG ARG A . A 1 420 THR 420 420 THR THR A . A 1 421 TYR 421 421 TYR TYR A . A 1 422 GLY 422 422 GLY GLY A . A 1 423 SER 423 423 SER SER A . A 1 424 ASN 424 424 ASN ASN A . A 1 425 SER 425 425 SER SER A . A 1 426 GLU 426 426 GLU GLU A . A 1 427 LEU 427 427 LEU LEU A . A 1 428 LEU 428 428 LEU LEU A . A 1 429 LEU 429 429 LEU LEU A . A 1 430 GLY 430 430 GLY GLY A . A 1 431 ASN 431 431 ASN ASN A . A 1 432 ALA 432 432 ALA ALA A . A 1 433 GLY 433 433 GLY GLY A . A 1 434 THR 434 434 THR THR A . A 1 435 VAL 435 435 VAL VAL A . A 1 436 SER 436 436 SER SER A . A 1 437 ASP 437 437 ASP ASP A . A 1 438 LEU 438 438 LEU LEU A . A 1 439 GLY 439 439 GLY GLY A . A 1 440 GLU 440 440 GLU GLU A . A 1 441 ASP 441 441 ASP ASP A . A 1 442 PHE 442 442 PHE PHE A . A 1 443 GLY 443 443 GLY GLY A . A 1 444 HIS 444 444 HIS HIS A . A 1 445 GLU 445 445 GLU GLU A . A 1 446 PHE 446 446 PHE PHE A . A 1 447 TYR 447 447 TYR TYR A . A 1 448 GLU 448 448 GLU GLU A . A 1 449 ALA 449 449 ALA ALA A . A 1 450 GLU 450 450 GLU GLU A . A 1 451 LEU 451 451 LEU LEU A . A 1 452 LYS 452 452 LYS LYS A . A 1 453 TYR 453 453 TYR TYR A . A 1 454 LEU 454 454 LEU LEU A . A 1 455 VAL 455 455 VAL VAL A . A 1 456 ASP 456 456 ASP ASP A . A 1 457 HIS 457 457 HIS HIS A . A 1 458 GLU 458 458 GLU GLU A . A 1 459 TRP 459 459 TRP TRP A . A 1 460 VAL 460 460 VAL VAL A . A 1 461 ARG 461 461 ARG ARG A . A 1 462 ARG 462 462 ARG ARG A . A 1 463 ALA 463 463 ALA ALA A . A 1 464 ASP 464 464 ASP ASP A . A 1 465 ASP 465 465 ASP ASP A . A 1 466 ALA 466 466 ALA ALA A . A 1 467 LEU 467 467 LEU LEU A . A 1 468 TRP 468 468 TRP TRP A . A 1 469 ARG 469 469 ARG ARG A . A 1 470 ARG 470 470 ARG ARG A . A 1 471 THR 471 471 THR THR A . A 1 472 LYS 472 472 LYS LYS A . A 1 473 GLN 473 473 GLN GLN A . A 1 474 GLY 474 474 GLY GLY A . A 1 475 MET 475 475 MET MET A . A 1 476 TRP 476 476 TRP TRP A . A 1 477 LEU 477 477 LEU LEU A . A 1 478 ASN 478 478 ASN ASN A . A 1 479 ALA 479 479 ALA ALA A . A 1 480 ASP 480 480 ASP ASP A . A 1 481 GLN 481 481 GLN GLN A . A 1 482 GLN 482 482 GLN GLN A . A 1 483 SER 483 483 SER SER A . A 1 484 ARG 484 484 ARG ARG A . A 1 485 VAL 485 485 VAL VAL A . A 1 486 SER 486 486 SER SER A . A 1 487 GLN 487 487 GLN GLN A . A 1 488 TRP 488 488 TRP TRP A . A 1 489 LEU 489 489 LEU LEU A . A 1 490 VAL 490 490 VAL VAL A . A 1 491 GLU 491 491 GLU GLU A . A 1 492 TYR 492 492 TYR TYR A . A 1 493 THR 493 493 THR THR A . A 1 494 GLN 494 494 GLN GLN A . A 1 495 GLN 495 495 GLN GLN A . A 1 496 ARG 496 496 ARG ARG A . A 1 497 LEU 497 497 LEU LEU A . A 1 498 SER 498 498 SER SER A . A 1 499 LEU 499 499 LEU LEU A . A 1 500 ALA 500 500 ALA ALA A . A 1 501 SER 501 501 SER SER A . # # loop_ # #