data_9A4T # _entry.id 9A4T # loop_ _atom_type.symbol C H N O S # loop_ _audit_author.name _audit_author.pdbx_ordinal "Stahl, K." 1 "Brock, O." 2 "Rappsilber, J." 3 # loop_ _audit_conform.dict_location _audit_conform.dict_name _audit_conform.dict_version https://mmcif.wwpdb.org/dictionaries/ascii/mmcif_ihm_ext.dic mmcif_ihm_ext.dic 1.26 http://mmcif.wwpdb.org/dictionaries/ascii/mmcif_pdbx_v50.dic mmcif_pdbx.dic 5.395 # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 9A4T _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2024-01-23 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2024-09-18 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 9A4T pdb_00009a4t 10.2210/pdb9a4t/pdb PDB-Dev PDBDEV_00000250 PDBDEV_00000250 ? # _ihm_entry_collection.id PDBDEV_G_1000003 _ihm_entry_collection.name . _ihm_entry_collection.details 'Collection of entries belonging to the publication: "Modelling protein complexes with crosslinking mass spectrometry and deep learning"' # _ihm_entry_collection_mapping.collection_id PDBDEV_G_1000003 _ihm_entry_collection_mapping.entry_id 9A4T # loop_ _chem_comp.formula _chem_comp.formula_weight _chem_comp.id _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.type "C3 H7 N O2" 89.094 ALA . ALANINE . "L-peptide linking" "C6 H15 N4 O2 1" 175.212 ARG . ARGININE . "L-peptide linking" "C4 H8 N2 O3" 132.119 ASN . ASPARAGINE . "L-peptide linking" "C4 H7 N O4" 133.103 ASP . "ASPARTIC ACID" . "L-peptide linking" "C3 H7 N O2 S" 121.154 CYS . CYSTEINE . "L-peptide linking" "C5 H10 N2 O3" 146.146 GLN . GLUTAMINE . "L-peptide linking" "C5 H9 N O4" 147.13 GLU . "GLUTAMIC ACID" . "L-peptide linking" "C2 H5 N O2" 75.067 GLY . GLYCINE . "peptide linking" "C6 H10 N3 O2 1" 156.165 HIS . HISTIDINE . "L-peptide linking" "C6 H13 N O2" 131.175 ILE . ISOLEUCINE . "L-peptide linking" "C6 H13 N O2" 131.175 LEU . LEUCINE . "L-peptide linking" "C6 H15 N2 O2 1" 147.198 LYS . LYSINE . "L-peptide linking" "C5 H11 N O2 S" 149.208 MET . METHIONINE . "L-peptide linking" "C9 H11 N O2" 165.192 PHE . PHENYLALANINE . "L-peptide linking" "C5 H9 N O2" 115.132 PRO . PROLINE . "L-peptide linking" "C3 H7 N O3" 105.093 SER . SERINE . "L-peptide linking" "C4 H9 N O3" 119.12 THR . THREONINE . "L-peptide linking" "C11 H12 N2 O2" 204.229 TRP . TRYPTOPHAN . "L-peptide linking" "C9 H11 N O3" 181.191 TYR . TYROSINE . "L-peptide linking" "C5 H11 N O2" 117.148 VAL . VALINE . "L-peptide linking" # _citation.country . _citation.id 1 _citation.journal_abbrev "Nat. Commun." _citation.journal_id_ASTM . _citation.journal_id_CSD . _citation.journal_id_ISSN . _citation.journal_issue . _citation.journal_volume 15 _citation.page_first 7866 _citation.page_last . _citation.pdbx_database_id_DOI 10.1038/s41467-024-51771-2 _citation.pdbx_database_id_PubMed 39251624 _citation.title "Modelling protein complexes with crosslinking mass spectrometry and deep learning" _citation.year 2024 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal 1 "Stahl, K." 1 1 "Warneke, R." 2 1 "Demann, L." 3 1 "Bremenkamp, R." 4 1 "Hormes, B." 5 1 "Brock, O." 6 1 "Stulke, J." 7 1 "Rappsilber, J." 8 # loop_ _entity.details _entity.formula_weight _entity.id _entity.pdbx_description _entity.pdbx_number_of_molecules _entity.src_method _entity.type . 22746.287 1 CLPQ_BACSU 1 MAN POLYMER . 61056.055 2 CLPY_BACSU 1 MAN POLYMER # loop_ _entity_poly.entity_id _entity_poly.nstd_chirality _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_sequence_evidence_code _entity_poly.pdbx_strand_id _entity_poly.type 1 . NO NO MSSFHATTIFAVQHKGRSAMSGDGQVTFGQAVVMKHTARKVRKLFNGKVLAGFAGSVADAFTLFEKFEAKLEEYNGNLKRAAVELAKEWRSDKVLRKLEAMLIVMNQDTLLLVSGTGEVIEPDDGILAIGSGGNYALAAGRALKKHAGESMSASEIARAALETAGEICVYTNDQIILEELE MSSFHATTIFAVQHKGRSAMSGDGQVTFGQAVVMKHTARKVRKLFNGKVLAGFAGSVADAFTLFEKFEAKLEEYNGNLKRAAVELAKEWRSDKVLRKLEAMLIVMNQDTLLLVSGTGEVIEPDDGILAIGSGGNYALAAGRALKKHAGESMSASEIARAALETAGEICVYTNDQIILEELE . A polypeptide(L) 2 . NO NO MEKKPLTPRQIVDRLDQYIVGQQNAKKAVAVALRNRYRRSLLDEKLKDEVVPKNILMMGPTGVGKTEIARRIAKLSGAPFIKIEATKFTEVGYVGRDVESMVRDLVETSVRLIKEEKMNEVKEQAEENANKRIVRLLVPGKKKQSGVKNPFEMFFGGSQPNGEDEAESQEEANIEEKRKRMAHQLALGELEDYYVTVEVEEQQPSMFDMLQGSGMEQMGMNMQDALSGLMPKKKKRRKMTVREARKVLTNEEASKLIDMDEVGQEAVQRAEESGIIFIDEIDKIAKNGGASSSADVSREGVQRDILPIVEGSTVVTKYGSVKTDHVLFIAAGAFHMAKPSDLIPELQGRFPIRVELNKLTVDDFVRILVEPDNALLKQYQALLQTEGISLEFSDEAIHKIAEVAYHVNQDTDNIGARRLHTILERLLEDLSFEAPDVTMEKITITPQYVEEKLGTIAKNKDLSQFIL MEKKPLTPRQIVDRLDQYIVGQQNAKKAVAVALRNRYRRSLLDEKLKDEVVPKNILMMGPTGVGKTEIARRIAKLSGAPFIKIEATKFTEVGYVGRDVESMVRDLVETSVRLIKEEKMNEVKEQAEENANKRIVRLLVPGKKKQSGVKNPFEMFFGGSQPNGEDEAESQEEANIEEKRKRMAHQLALGELEDYYVTVEVEEQQPSMFDMLQGSGMEQMGMNMQDALSGLMPKKKKRRKMTVREARKVLTNEEASKLIDMDEVGQEAVQRAEESGIIFIDEIDKIAKNGGASSSADVSREGVQRDILPIVEGSTVVTKYGSVKTDHVLFIAAGAFHMAKPSDLIPELQGRFPIRVELNKLTVDDFVRILVEPDNALLKQYQALLQTEGISLEFSDEAIHKIAEVAYHVNQDTDNIGARRLHTILERLLEDLSFEAPDVTMEKITITPQYVEEKLGTIAKNKDLSQFIL . B polypeptide(L) # loop_ _entity_poly_seq.entity_id _entity_poly_seq.hetero _entity_poly_seq.mon_id _entity_poly_seq.num 1 . MET 1 1 . SER 2 1 . SER 3 1 . PHE 4 1 . HIS 5 1 . ALA 6 1 . THR 7 1 . THR 8 1 . ILE 9 1 . PHE 10 1 . ALA 11 1 . VAL 12 1 . GLN 13 1 . HIS 14 1 . LYS 15 1 . GLY 16 1 . ARG 17 1 . SER 18 1 . ALA 19 1 . MET 20 1 . SER 21 1 . GLY 22 1 . ASP 23 1 . GLY 24 1 . GLN 25 1 . VAL 26 1 . THR 27 1 . PHE 28 1 . GLY 29 1 . GLN 30 1 . ALA 31 1 . VAL 32 1 . VAL 33 1 . MET 34 1 . LYS 35 1 . HIS 36 1 . THR 37 1 . ALA 38 1 . ARG 39 1 . LYS 40 1 . VAL 41 1 . ARG 42 1 . LYS 43 1 . LEU 44 1 . PHE 45 1 . ASN 46 1 . GLY 47 1 . LYS 48 1 . VAL 49 1 . LEU 50 1 . ALA 51 1 . GLY 52 1 . PHE 53 1 . ALA 54 1 . GLY 55 1 . SER 56 1 . VAL 57 1 . ALA 58 1 . ASP 59 1 . ALA 60 1 . PHE 61 1 . THR 62 1 . LEU 63 1 . PHE 64 1 . GLU 65 1 . LYS 66 1 . PHE 67 1 . GLU 68 1 . ALA 69 1 . LYS 70 1 . LEU 71 1 . GLU 72 1 . GLU 73 1 . TYR 74 1 . ASN 75 1 . GLY 76 1 . ASN 77 1 . LEU 78 1 . LYS 79 1 . ARG 80 1 . ALA 81 1 . ALA 82 1 . VAL 83 1 . GLU 84 1 . LEU 85 1 . ALA 86 1 . LYS 87 1 . GLU 88 1 . TRP 89 1 . ARG 90 1 . SER 91 1 . ASP 92 1 . LYS 93 1 . VAL 94 1 . LEU 95 1 . ARG 96 1 . LYS 97 1 . LEU 98 1 . GLU 99 1 . ALA 100 1 . MET 101 1 . LEU 102 1 . ILE 103 1 . VAL 104 1 . MET 105 1 . ASN 106 1 . GLN 107 1 . ASP 108 1 . THR 109 1 . LEU 110 1 . LEU 111 1 . LEU 112 1 . VAL 113 1 . SER 114 1 . GLY 115 1 . THR 116 1 . GLY 117 1 . GLU 118 1 . VAL 119 1 . ILE 120 1 . GLU 121 1 . PRO 122 1 . ASP 123 1 . ASP 124 1 . GLY 125 1 . ILE 126 1 . LEU 127 1 . ALA 128 1 . ILE 129 1 . GLY 130 1 . SER 131 1 . GLY 132 1 . GLY 133 1 . ASN 134 1 . TYR 135 1 . ALA 136 1 . LEU 137 1 . ALA 138 1 . ALA 139 1 . GLY 140 1 . ARG 141 1 . ALA 142 1 . LEU 143 1 . LYS 144 1 . LYS 145 1 . HIS 146 1 . ALA 147 1 . GLY 148 1 . GLU 149 1 . SER 150 1 . MET 151 1 . SER 152 1 . ALA 153 1 . SER 154 1 . GLU 155 1 . ILE 156 1 . ALA 157 1 . ARG 158 1 . ALA 159 1 . ALA 160 1 . LEU 161 1 . GLU 162 1 . THR 163 1 . ALA 164 1 . GLY 165 1 . GLU 166 1 . ILE 167 1 . CYS 168 1 . VAL 169 1 . TYR 170 1 . THR 171 1 . ASN 172 1 . ASP 173 1 . GLN 174 1 . ILE 175 1 . ILE 176 1 . LEU 177 1 . GLU 178 1 . GLU 179 1 . LEU 180 1 . GLU 181 2 . MET 1 2 . GLU 2 2 . LYS 3 2 . LYS 4 2 . PRO 5 2 . LEU 6 2 . THR 7 2 . PRO 8 2 . ARG 9 2 . GLN 10 2 . ILE 11 2 . VAL 12 2 . ASP 13 2 . ARG 14 2 . LEU 15 2 . ASP 16 2 . GLN 17 2 . TYR 18 2 . ILE 19 2 . VAL 20 2 . GLY 21 2 . GLN 22 2 . GLN 23 2 . ASN 24 2 . ALA 25 2 . LYS 26 2 . LYS 27 2 . ALA 28 2 . VAL 29 2 . ALA 30 2 . VAL 31 2 . ALA 32 2 . LEU 33 2 . ARG 34 2 . ASN 35 2 . ARG 36 2 . TYR 37 2 . ARG 38 2 . ARG 39 2 . SER 40 2 . LEU 41 2 . LEU 42 2 . ASP 43 2 . GLU 44 2 . LYS 45 2 . LEU 46 2 . LYS 47 2 . ASP 48 2 . GLU 49 2 . VAL 50 2 . VAL 51 2 . PRO 52 2 . LYS 53 2 . ASN 54 2 . ILE 55 2 . LEU 56 2 . MET 57 2 . MET 58 2 . GLY 59 2 . PRO 60 2 . THR 61 2 . GLY 62 2 . VAL 63 2 . GLY 64 2 . LYS 65 2 . THR 66 2 . GLU 67 2 . ILE 68 2 . ALA 69 2 . ARG 70 2 . ARG 71 2 . ILE 72 2 . ALA 73 2 . LYS 74 2 . LEU 75 2 . SER 76 2 . GLY 77 2 . ALA 78 2 . PRO 79 2 . PHE 80 2 . ILE 81 2 . LYS 82 2 . ILE 83 2 . GLU 84 2 . ALA 85 2 . THR 86 2 . LYS 87 2 . PHE 88 2 . THR 89 2 . GLU 90 2 . VAL 91 2 . GLY 92 2 . TYR 93 2 . VAL 94 2 . GLY 95 2 . ARG 96 2 . ASP 97 2 . VAL 98 2 . GLU 99 2 . SER 100 2 . MET 101 2 . VAL 102 2 . ARG 103 2 . ASP 104 2 . LEU 105 2 . VAL 106 2 . GLU 107 2 . THR 108 2 . SER 109 2 . VAL 110 2 . ARG 111 2 . LEU 112 2 . ILE 113 2 . LYS 114 2 . GLU 115 2 . GLU 116 2 . LYS 117 2 . MET 118 2 . ASN 119 2 . GLU 120 2 . VAL 121 2 . LYS 122 2 . GLU 123 2 . GLN 124 2 . ALA 125 2 . GLU 126 2 . GLU 127 2 . ASN 128 2 . ALA 129 2 . ASN 130 2 . LYS 131 2 . ARG 132 2 . ILE 133 2 . VAL 134 2 . ARG 135 2 . LEU 136 2 . LEU 137 2 . VAL 138 2 . PRO 139 2 . GLY 140 2 . LYS 141 2 . LYS 142 2 . LYS 143 2 . GLN 144 2 . SER 145 2 . GLY 146 2 . VAL 147 2 . LYS 148 2 . ASN 149 2 . PRO 150 2 . PHE 151 2 . GLU 152 2 . MET 153 2 . PHE 154 2 . PHE 155 2 . GLY 156 2 . GLY 157 2 . SER 158 2 . GLN 159 2 . PRO 160 2 . ASN 161 2 . GLY 162 2 . GLU 163 2 . ASP 164 2 . GLU 165 2 . ALA 166 2 . GLU 167 2 . SER 168 2 . GLN 169 2 . GLU 170 2 . GLU 171 2 . ALA 172 2 . ASN 173 2 . ILE 174 2 . GLU 175 2 . GLU 176 2 . LYS 177 2 . ARG 178 2 . LYS 179 2 . ARG 180 2 . MET 181 2 . ALA 182 2 . HIS 183 2 . GLN 184 2 . LEU 185 2 . ALA 186 2 . LEU 187 2 . GLY 188 2 . GLU 189 2 . LEU 190 2 . GLU 191 2 . ASP 192 2 . TYR 193 2 . TYR 194 2 . VAL 195 2 . THR 196 2 . VAL 197 2 . GLU 198 2 . VAL 199 2 . GLU 200 2 . GLU 201 2 . GLN 202 2 . GLN 203 2 . PRO 204 2 . SER 205 2 . MET 206 2 . PHE 207 2 . ASP 208 2 . MET 209 2 . LEU 210 2 . GLN 211 2 . GLY 212 2 . SER 213 2 . GLY 214 2 . MET 215 2 . GLU 216 2 . GLN 217 2 . MET 218 2 . GLY 219 2 . MET 220 2 . ASN 221 2 . MET 222 2 . GLN 223 2 . ASP 224 2 . ALA 225 2 . LEU 226 2 . SER 227 2 . GLY 228 2 . LEU 229 2 . MET 230 2 . PRO 231 2 . LYS 232 2 . LYS 233 2 . LYS 234 2 . LYS 235 2 . ARG 236 2 . ARG 237 2 . LYS 238 2 . MET 239 2 . THR 240 2 . VAL 241 2 . ARG 242 2 . GLU 243 2 . ALA 244 2 . ARG 245 2 . LYS 246 2 . VAL 247 2 . LEU 248 2 . THR 249 2 . ASN 250 2 . GLU 251 2 . GLU 252 2 . ALA 253 2 . SER 254 2 . LYS 255 2 . LEU 256 2 . ILE 257 2 . ASP 258 2 . MET 259 2 . ASP 260 2 . GLU 261 2 . VAL 262 2 . GLY 263 2 . GLN 264 2 . GLU 265 2 . ALA 266 2 . VAL 267 2 . GLN 268 2 . ARG 269 2 . ALA 270 2 . GLU 271 2 . GLU 272 2 . SER 273 2 . GLY 274 2 . ILE 275 2 . ILE 276 2 . PHE 277 2 . ILE 278 2 . ASP 279 2 . GLU 280 2 . ILE 281 2 . ASP 282 2 . LYS 283 2 . ILE 284 2 . ALA 285 2 . LYS 286 2 . ASN 287 2 . GLY 288 2 . GLY 289 2 . ALA 290 2 . SER 291 2 . SER 292 2 . SER 293 2 . ALA 294 2 . ASP 295 2 . VAL 296 2 . SER 297 2 . ARG 298 2 . GLU 299 2 . GLY 300 2 . VAL 301 2 . GLN 302 2 . ARG 303 2 . ASP 304 2 . ILE 305 2 . LEU 306 2 . PRO 307 2 . ILE 308 2 . VAL 309 2 . GLU 310 2 . GLY 311 2 . SER 312 2 . THR 313 2 . VAL 314 2 . VAL 315 2 . THR 316 2 . LYS 317 2 . TYR 318 2 . GLY 319 2 . SER 320 2 . VAL 321 2 . LYS 322 2 . THR 323 2 . ASP 324 2 . HIS 325 2 . VAL 326 2 . LEU 327 2 . PHE 328 2 . ILE 329 2 . ALA 330 2 . ALA 331 2 . GLY 332 2 . ALA 333 2 . PHE 334 2 . HIS 335 2 . MET 336 2 . ALA 337 2 . LYS 338 2 . PRO 339 2 . SER 340 2 . ASP 341 2 . LEU 342 2 . ILE 343 2 . PRO 344 2 . GLU 345 2 . LEU 346 2 . GLN 347 2 . GLY 348 2 . ARG 349 2 . PHE 350 2 . PRO 351 2 . ILE 352 2 . ARG 353 2 . VAL 354 2 . GLU 355 2 . LEU 356 2 . ASN 357 2 . LYS 358 2 . LEU 359 2 . THR 360 2 . VAL 361 2 . ASP 362 2 . ASP 363 2 . PHE 364 2 . VAL 365 2 . ARG 366 2 . ILE 367 2 . LEU 368 2 . VAL 369 2 . GLU 370 2 . PRO 371 2 . ASP 372 2 . ASN 373 2 . ALA 374 2 . LEU 375 2 . LEU 376 2 . LYS 377 2 . GLN 378 2 . TYR 379 2 . GLN 380 2 . ALA 381 2 . LEU 382 2 . LEU 383 2 . GLN 384 2 . THR 385 2 . GLU 386 2 . GLY 387 2 . ILE 388 2 . SER 389 2 . LEU 390 2 . GLU 391 2 . PHE 392 2 . SER 393 2 . ASP 394 2 . GLU 395 2 . ALA 396 2 . ILE 397 2 . HIS 398 2 . LYS 399 2 . ILE 400 2 . ALA 401 2 . GLU 402 2 . VAL 403 2 . ALA 404 2 . TYR 405 2 . HIS 406 2 . VAL 407 2 . ASN 408 2 . GLN 409 2 . ASP 410 2 . THR 411 2 . ASP 412 2 . ASN 413 2 . ILE 414 2 . GLY 415 2 . ALA 416 2 . ARG 417 2 . ARG 418 2 . LEU 419 2 . HIS 420 2 . THR 421 2 . ILE 422 2 . LEU 423 2 . GLU 424 2 . ARG 425 2 . LEU 426 2 . LEU 427 2 . GLU 428 2 . ASP 429 2 . LEU 430 2 . SER 431 2 . PHE 432 2 . GLU 433 2 . ALA 434 2 . PRO 435 2 . ASP 436 2 . VAL 437 2 . THR 438 2 . MET 439 2 . GLU 440 2 . LYS 441 2 . ILE 442 2 . THR 443 2 . ILE 444 2 . THR 445 2 . PRO 446 2 . GLN 447 2 . TYR 448 2 . VAL 449 2 . GLU 450 2 . GLU 451 2 . LYS 452 2 . LEU 453 2 . GLY 454 2 . THR 455 2 . ILE 456 2 . ALA 457 2 . LYS 458 2 . ASN 459 2 . LYS 460 2 . ASP 461 2 . LEU 462 2 . SER 463 2 . GLN 464 2 . PHE 465 2 . ILE 466 2 . LEU 467 # _ihm_chemical_component_descriptor.auth_name SDA _ihm_chemical_component_descriptor.chemical_name "succinimidyl 4,4'-azipentanoate" _ihm_chemical_component_descriptor.common_name . _ihm_chemical_component_descriptor.details . _ihm_chemical_component_descriptor.id 1 _ihm_chemical_component_descriptor.inchi 1S/C9H11N3O4/c1-9(10-11-9)5-4-8(15)16-12-6(13)2-3-7(12)14/h2-5H2,1H3 _ihm_chemical_component_descriptor.inchi_key " SYYLQNPWAPHRFV-UHFFFAOYSA-N" _ihm_chemical_component_descriptor.smiles CC1(N=N1)CCC(ON2C(CCC2=O)=O)=O _ihm_chemical_component_descriptor.smiles_canonical . # loop_ _ihm_cross_link_list.comp_id_1 _ihm_cross_link_list.comp_id_2 _ihm_cross_link_list.dataset_list_id _ihm_cross_link_list.details _ihm_cross_link_list.entity_description_1 _ihm_cross_link_list.entity_description_2 _ihm_cross_link_list.entity_id_1 _ihm_cross_link_list.entity_id_2 _ihm_cross_link_list.group_id _ihm_cross_link_list.id _ihm_cross_link_list.linker_chem_comp_descriptor_id _ihm_cross_link_list.linker_type _ihm_cross_link_list.seq_id_1 _ihm_cross_link_list.seq_id_2 LYS LYS 1 . CLPQ_BACSU CLPY_BACSU 1 2 1 1 1 SDA 79 458 LYS LYS 1 . CLPQ_BACSU CLPY_BACSU 1 2 2 2 1 SDA 93 286 # loop_ _ihm_cross_link_restraint.asym_id_1 _ihm_cross_link_restraint.asym_id_2 _ihm_cross_link_restraint.atom_id_1 _ihm_cross_link_restraint.atom_id_2 _ihm_cross_link_restraint.comp_id_1 _ihm_cross_link_restraint.comp_id_2 _ihm_cross_link_restraint.conditional_crosslink_flag _ihm_cross_link_restraint.distance_threshold _ihm_cross_link_restraint.entity_id_1 _ihm_cross_link_restraint.entity_id_2 _ihm_cross_link_restraint.group_id _ihm_cross_link_restraint.id _ihm_cross_link_restraint.model_granularity _ihm_cross_link_restraint.pseudo_site_flag _ihm_cross_link_restraint.psi _ihm_cross_link_restraint.restraint_type _ihm_cross_link_restraint.seq_id_1 _ihm_cross_link_restraint.seq_id_2 _ihm_cross_link_restraint.sigma_1 _ihm_cross_link_restraint.sigma_2 A B . . LYS LYS . 25 1 2 1 1 by-residue NO 0.95 "upper bound" 79 458 . . A B . . LYS LYS . 25 1 2 2 2 by-residue NO 0.95 "upper bound" 93 286 . . # _ihm_dataset_group.application . _ihm_dataset_group.details . _ihm_dataset_group.id 1 _ihm_dataset_group.name . # _ihm_dataset_group_link.dataset_list_id 1 _ihm_dataset_group_link.group_id 1 # _ihm_dataset_list.data_type "Crosslinking-MS data" _ihm_dataset_list.database_hosted YES _ihm_dataset_list.details . _ihm_dataset_list.id 1 # _ihm_dataset_related_db_reference.accession_code PXD035508 _ihm_dataset_related_db_reference.dataset_list_id 1 _ihm_dataset_related_db_reference.db_name PRIDE _ihm_dataset_related_db_reference.details . _ihm_dataset_related_db_reference.id 1 _ihm_dataset_related_db_reference.version . # loop_ _ihm_entity_poly_segment.comp_id_begin _ihm_entity_poly_segment.comp_id_end _ihm_entity_poly_segment.entity_id _ihm_entity_poly_segment.id _ihm_entity_poly_segment.seq_id_begin _ihm_entity_poly_segment.seq_id_end MET GLU 1 1 1 181 MET LEU 2 2 1 467 # _ihm_model_group.details . _ihm_model_group.id 1 _ihm_model_group.name . # _ihm_model_group_link.group_id 1 _ihm_model_group_link.model_id 1 # _ihm_model_list.assembly_id 1 _ihm_model_list.model_id 1 _ihm_model_list.model_name . _ihm_model_list.protocol_id 1 _ihm_model_list.representation_id 1 # _ihm_model_representation.details . _ihm_model_representation.id 1 _ihm_model_representation.name . # loop_ _ihm_model_representation_details.description _ihm_model_representation_details.entity_asym_id _ihm_model_representation_details.entity_description _ihm_model_representation_details.entity_id _ihm_model_representation_details.entity_poly_segment_id _ihm_model_representation_details.id _ihm_model_representation_details.model_granularity _ihm_model_representation_details.model_mode _ihm_model_representation_details.model_object_count _ihm_model_representation_details.model_object_primitive _ihm_model_representation_details.representation_id _ihm_model_representation_details.starting_model_id . A CLPQ_BACSU 1 1 1 by-atom flexible . atomistic 1 . . B CLPY_BACSU 2 2 2 by-atom flexible . atomistic 1 . # _ihm_modeling_protocol.details . _ihm_modeling_protocol.id 1 _ihm_modeling_protocol.num_steps 1 _ihm_modeling_protocol.protocol_name AlphaLink2 # _ihm_modeling_protocol_details.dataset_group_id 1 _ihm_modeling_protocol_details.description . _ihm_modeling_protocol_details.ensemble_flag NO _ihm_modeling_protocol_details.id 1 _ihm_modeling_protocol_details.multi_scale_flag NO _ihm_modeling_protocol_details.multi_state_flag NO _ihm_modeling_protocol_details.num_models_begin 0 _ihm_modeling_protocol_details.num_models_end 1 _ihm_modeling_protocol_details.ordered_flag NO _ihm_modeling_protocol_details.protocol_id 1 _ihm_modeling_protocol_details.script_file_id . _ihm_modeling_protocol_details.software_id 1 _ihm_modeling_protocol_details.step_id 1 _ihm_modeling_protocol_details.step_method AlphaLink2 _ihm_modeling_protocol_details.step_name AlphaLink2 _ihm_modeling_protocol_details.struct_assembly_description . _ihm_modeling_protocol_details.struct_assembly_id 1 # _ihm_struct_assembly.description "Integrative model of CLPQ-CLPY by crosslinking MS and deep learning" _ihm_struct_assembly.id 1 _ihm_struct_assembly.name CLPQ-CLPY # loop_ _ihm_struct_assembly_details.assembly_id _ihm_struct_assembly_details.asym_id _ihm_struct_assembly_details.entity_description _ihm_struct_assembly_details.entity_id _ihm_struct_assembly_details.entity_poly_segment_id _ihm_struct_assembly_details.id _ihm_struct_assembly_details.parent_assembly_id 1 A CLPQ_BACSU 1 1 1 1 1 B CLPY_BACSU 2 2 2 1 # _software.citation_id 1 _software.classification "model building" _software.description "Modelling protein complexes with crosslinking mass spectrometry and deep learning" _software.location https://github.com/Rappsilber-Laboratory/AlphaLink2 _software.name AlphaLink2 _software.pdbx_ordinal 1 _software.type program _software.version 1.0 # _struct.entry_id 9A4T _struct.pdbx_CASP_flag . _struct.pdbx_descriptor . _struct.pdbx_details . _struct.pdbx_model_details . _struct.pdbx_model_type_details . _struct.pdbx_structure_determination_methodology integrative _struct.title "Integrative model of CLPQ-CLPY by crosslinking MS and deep learning" # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_PDB_id _struct_asym.pdbx_alt_id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.pdbx_order _struct_asym.pdbx_type CLPQ_BACSU 1 A . . . . . . CLPY_BACSU 2 B . . . . . . # loop_ _struct_ref.db_code _struct_ref.db_name _struct_ref.details _struct_ref.entity_id _struct_ref.id _struct_ref.pdbx_align_begin _struct_ref.pdbx_align_end _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.pdbx_seq_one_letter_code A UNP . 1 1 1 . P39070 . MSSFHATTIFAVQHKGRSAMSGDGQVTFGQAVVMKHTARKVRKLFNGKVLAGFAGSVADAFTLFEKFEAKLEEYNGNLKRAAVELAKEWRSDKVLRKLEAMLIVMNQDTLLLVSGTGEVIEPDDGILAIGSGGNYALAAGRALKKHAGESMSASEIARAALETAGEICVYTNDQIILEELE B UNP . 2 2 1 . P39778 . MEKKPLTPRQIVDRLDQYIVGQQNAKKAVAVALRNRYRRSLLDEKLKDEVVPKNILMMGPTGVGKTEIARRIAKLSGAPFIKIEATKFTEVGYVGRDVESMVRDLVETSVRLIKEEKMNEVKEQAEENANKRIVRLLVPGKKKQSGVKNPFEMFFGGSQPNGEDEAESQEEANIEEKRKRMAHQLALGELEDYYVTVEVEEQQPSMFDMLQGSGMEQMGMNMQDALSGLMPKKKKRRKMTVREARKVLTNEEASKLIDMDEVGQEAVQRAEESGIIFIDEIDKIAKNGGASSSADVSREGVQRDILPIVEGSTVVTKYGSVKTDHVLFIAAGAFHMAKPSDLIPELQGRFPIRVELNKLTVDDFVRILVEPDNALLKQYQALLQTEGISLEFSDEAIHKIAEVAYHVNQDTDNIGARRLHTILERLLEDLSFEAPDVTMEKITITPQYVEEKLGTIAKNKDLSQFIL # loop_ _struct_ref_seq.align_id _struct_ref_seq.db_align_beg _struct_ref_seq.db_align_end _struct_ref_seq.ref_id _struct_ref_seq.seq_align_beg _struct_ref_seq.seq_align_end 1 1 181 1 1 181 2 1 467 2 1 467 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code A 1 1 MET 1 1 MET MET A . A 1 2 SER 2 2 SER SER A . A 1 3 SER 3 3 SER SER A . A 1 4 PHE 4 4 PHE PHE A . A 1 5 HIS 5 5 HIS HIS A . A 1 6 ALA 6 6 ALA ALA A . A 1 7 THR 7 7 THR THR A . A 1 8 THR 8 8 THR THR A . A 1 9 ILE 9 9 ILE ILE A . A 1 10 PHE 10 10 PHE PHE A . A 1 11 ALA 11 11 ALA ALA A . A 1 12 VAL 12 12 VAL VAL A . A 1 13 GLN 13 13 GLN GLN A . A 1 14 HIS 14 14 HIS HIS A . A 1 15 LYS 15 15 LYS LYS A . A 1 16 GLY 16 16 GLY GLY A . A 1 17 ARG 17 17 ARG ARG A . A 1 18 SER 18 18 SER SER A . A 1 19 ALA 19 19 ALA ALA A . A 1 20 MET 20 20 MET MET A . A 1 21 SER 21 21 SER SER A . A 1 22 GLY 22 22 GLY GLY A . A 1 23 ASP 23 23 ASP ASP A . A 1 24 GLY 24 24 GLY GLY A . A 1 25 GLN 25 25 GLN GLN A . A 1 26 VAL 26 26 VAL VAL A . A 1 27 THR 27 27 THR THR A . A 1 28 PHE 28 28 PHE PHE A . A 1 29 GLY 29 29 GLY GLY A . A 1 30 GLN 30 30 GLN GLN A . A 1 31 ALA 31 31 ALA ALA A . A 1 32 VAL 32 32 VAL VAL A . A 1 33 VAL 33 33 VAL VAL A . A 1 34 MET 34 34 MET MET A . A 1 35 LYS 35 35 LYS LYS A . A 1 36 HIS 36 36 HIS HIS A . A 1 37 THR 37 37 THR THR A . A 1 38 ALA 38 38 ALA ALA A . A 1 39 ARG 39 39 ARG ARG A . A 1 40 LYS 40 40 LYS LYS A . A 1 41 VAL 41 41 VAL VAL A . A 1 42 ARG 42 42 ARG ARG A . A 1 43 LYS 43 43 LYS LYS A . A 1 44 LEU 44 44 LEU LEU A . A 1 45 PHE 45 45 PHE PHE A . A 1 46 ASN 46 46 ASN ASN A . A 1 47 GLY 47 47 GLY GLY A . A 1 48 LYS 48 48 LYS LYS A . A 1 49 VAL 49 49 VAL VAL A . A 1 50 LEU 50 50 LEU LEU A . A 1 51 ALA 51 51 ALA ALA A . A 1 52 GLY 52 52 GLY GLY A . A 1 53 PHE 53 53 PHE PHE A . A 1 54 ALA 54 54 ALA ALA A . A 1 55 GLY 55 55 GLY GLY A . A 1 56 SER 56 56 SER SER A . A 1 57 VAL 57 57 VAL VAL A . A 1 58 ALA 58 58 ALA ALA A . A 1 59 ASP 59 59 ASP ASP A . A 1 60 ALA 60 60 ALA ALA A . A 1 61 PHE 61 61 PHE PHE A . A 1 62 THR 62 62 THR THR A . A 1 63 LEU 63 63 LEU LEU A . A 1 64 PHE 64 64 PHE PHE A . A 1 65 GLU 65 65 GLU GLU A . A 1 66 LYS 66 66 LYS LYS A . A 1 67 PHE 67 67 PHE PHE A . A 1 68 GLU 68 68 GLU GLU A . A 1 69 ALA 69 69 ALA ALA A . A 1 70 LYS 70 70 LYS LYS A . A 1 71 LEU 71 71 LEU LEU A . A 1 72 GLU 72 72 GLU GLU A . A 1 73 GLU 73 73 GLU GLU A . A 1 74 TYR 74 74 TYR TYR A . A 1 75 ASN 75 75 ASN ASN A . A 1 76 GLY 76 76 GLY GLY A . A 1 77 ASN 77 77 ASN ASN A . A 1 78 LEU 78 78 LEU LEU A . A 1 79 LYS 79 79 LYS LYS A . A 1 80 ARG 80 80 ARG ARG A . A 1 81 ALA 81 81 ALA ALA A . A 1 82 ALA 82 82 ALA ALA A . A 1 83 VAL 83 83 VAL VAL A . A 1 84 GLU 84 84 GLU GLU A . A 1 85 LEU 85 85 LEU LEU A . A 1 86 ALA 86 86 ALA ALA A . A 1 87 LYS 87 87 LYS LYS A . A 1 88 GLU 88 88 GLU GLU A . A 1 89 TRP 89 89 TRP TRP A . A 1 90 ARG 90 90 ARG ARG A . A 1 91 SER 91 91 SER SER A . A 1 92 ASP 92 92 ASP ASP A . A 1 93 LYS 93 93 LYS LYS A . A 1 94 VAL 94 94 VAL VAL A . A 1 95 LEU 95 95 LEU LEU A . A 1 96 ARG 96 96 ARG ARG A . A 1 97 LYS 97 97 LYS LYS A . A 1 98 LEU 98 98 LEU LEU A . A 1 99 GLU 99 99 GLU GLU A . A 1 100 ALA 100 100 ALA ALA A . A 1 101 MET 101 101 MET MET A . A 1 102 LEU 102 102 LEU LEU A . A 1 103 ILE 103 103 ILE ILE A . A 1 104 VAL 104 104 VAL VAL A . A 1 105 MET 105 105 MET MET A . A 1 106 ASN 106 106 ASN ASN A . A 1 107 GLN 107 107 GLN GLN A . A 1 108 ASP 108 108 ASP ASP A . A 1 109 THR 109 109 THR THR A . A 1 110 LEU 110 110 LEU LEU A . A 1 111 LEU 111 111 LEU LEU A . A 1 112 LEU 112 112 LEU LEU A . A 1 113 VAL 113 113 VAL VAL A . A 1 114 SER 114 114 SER SER A . A 1 115 GLY 115 115 GLY GLY A . A 1 116 THR 116 116 THR THR A . A 1 117 GLY 117 117 GLY GLY A . A 1 118 GLU 118 118 GLU GLU A . A 1 119 VAL 119 119 VAL VAL A . A 1 120 ILE 120 120 ILE ILE A . A 1 121 GLU 121 121 GLU GLU A . A 1 122 PRO 122 122 PRO PRO A . A 1 123 ASP 123 123 ASP ASP A . A 1 124 ASP 124 124 ASP ASP A . A 1 125 GLY 125 125 GLY GLY A . A 1 126 ILE 126 126 ILE ILE A . A 1 127 LEU 127 127 LEU LEU A . A 1 128 ALA 128 128 ALA ALA A . A 1 129 ILE 129 129 ILE ILE A . A 1 130 GLY 130 130 GLY GLY A . A 1 131 SER 131 131 SER SER A . A 1 132 GLY 132 132 GLY GLY A . A 1 133 GLY 133 133 GLY GLY A . A 1 134 ASN 134 134 ASN ASN A . A 1 135 TYR 135 135 TYR TYR A . A 1 136 ALA 136 136 ALA ALA A . A 1 137 LEU 137 137 LEU LEU A . A 1 138 ALA 138 138 ALA ALA A . A 1 139 ALA 139 139 ALA ALA A . A 1 140 GLY 140 140 GLY GLY A . A 1 141 ARG 141 141 ARG ARG A . A 1 142 ALA 142 142 ALA ALA A . A 1 143 LEU 143 143 LEU LEU A . A 1 144 LYS 144 144 LYS LYS A . A 1 145 LYS 145 145 LYS LYS A . A 1 146 HIS 146 146 HIS HIS A . A 1 147 ALA 147 147 ALA ALA A . A 1 148 GLY 148 148 GLY GLY A . A 1 149 GLU 149 149 GLU GLU A . A 1 150 SER 150 150 SER SER A . A 1 151 MET 151 151 MET MET A . A 1 152 SER 152 152 SER SER A . A 1 153 ALA 153 153 ALA ALA A . A 1 154 SER 154 154 SER SER A . A 1 155 GLU 155 155 GLU GLU A . A 1 156 ILE 156 156 ILE ILE A . A 1 157 ALA 157 157 ALA ALA A . A 1 158 ARG 158 158 ARG ARG A . A 1 159 ALA 159 159 ALA ALA A . A 1 160 ALA 160 160 ALA ALA A . A 1 161 LEU 161 161 LEU LEU A . A 1 162 GLU 162 162 GLU GLU A . A 1 163 THR 163 163 THR THR A . A 1 164 ALA 164 164 ALA ALA A . A 1 165 GLY 165 165 GLY GLY A . A 1 166 GLU 166 166 GLU GLU A . A 1 167 ILE 167 167 ILE ILE A . A 1 168 CYS 168 168 CYS CYS A . A 1 169 VAL 169 169 VAL VAL A . A 1 170 TYR 170 170 TYR TYR A . A 1 171 THR 171 171 THR THR A . A 1 172 ASN 172 172 ASN ASN A . A 1 173 ASP 173 173 ASP ASP A . A 1 174 GLN 174 174 GLN GLN A . A 1 175 ILE 175 175 ILE ILE A . A 1 176 ILE 176 176 ILE ILE A . A 1 177 LEU 177 177 LEU LEU A . A 1 178 GLU 178 178 GLU GLU A . A 1 179 GLU 179 179 GLU GLU A . A 1 180 LEU 180 180 LEU LEU A . A 1 181 GLU 181 181 GLU GLU A . B 2 1 MET 1 1 MET MET B . B 2 2 GLU 2 2 GLU GLU B . B 2 3 LYS 3 3 LYS LYS B . B 2 4 LYS 4 4 LYS LYS B . B 2 5 PRO 5 5 PRO PRO B . B 2 6 LEU 6 6 LEU LEU B . B 2 7 THR 7 7 THR THR B . B 2 8 PRO 8 8 PRO PRO B . B 2 9 ARG 9 9 ARG ARG B . B 2 10 GLN 10 10 GLN GLN B . B 2 11 ILE 11 11 ILE ILE B . B 2 12 VAL 12 12 VAL VAL B . B 2 13 ASP 13 13 ASP ASP B . B 2 14 ARG 14 14 ARG ARG B . B 2 15 LEU 15 15 LEU LEU B . B 2 16 ASP 16 16 ASP ASP B . B 2 17 GLN 17 17 GLN GLN B . B 2 18 TYR 18 18 TYR TYR B . B 2 19 ILE 19 19 ILE ILE B . B 2 20 VAL 20 20 VAL VAL B . B 2 21 GLY 21 21 GLY GLY B . B 2 22 GLN 22 22 GLN GLN B . B 2 23 GLN 23 23 GLN GLN B . B 2 24 ASN 24 24 ASN ASN B . B 2 25 ALA 25 25 ALA ALA B . B 2 26 LYS 26 26 LYS LYS B . B 2 27 LYS 27 27 LYS LYS B . B 2 28 ALA 28 28 ALA ALA B . B 2 29 VAL 29 29 VAL VAL B . B 2 30 ALA 30 30 ALA ALA B . B 2 31 VAL 31 31 VAL VAL B . B 2 32 ALA 32 32 ALA ALA B . B 2 33 LEU 33 33 LEU LEU B . B 2 34 ARG 34 34 ARG ARG B . B 2 35 ASN 35 35 ASN ASN B . B 2 36 ARG 36 36 ARG ARG B . B 2 37 TYR 37 37 TYR TYR B . B 2 38 ARG 38 38 ARG ARG B . B 2 39 ARG 39 39 ARG ARG B . B 2 40 SER 40 40 SER SER B . B 2 41 LEU 41 41 LEU LEU B . B 2 42 LEU 42 42 LEU LEU B . B 2 43 ASP 43 43 ASP ASP B . B 2 44 GLU 44 44 GLU GLU B . B 2 45 LYS 45 45 LYS LYS B . B 2 46 LEU 46 46 LEU LEU B . B 2 47 LYS 47 47 LYS LYS B . B 2 48 ASP 48 48 ASP ASP B . B 2 49 GLU 49 49 GLU GLU B . B 2 50 VAL 50 50 VAL VAL B . B 2 51 VAL 51 51 VAL VAL B . B 2 52 PRO 52 52 PRO PRO B . B 2 53 LYS 53 53 LYS LYS B . B 2 54 ASN 54 54 ASN ASN B . B 2 55 ILE 55 55 ILE ILE B . B 2 56 LEU 56 56 LEU LEU B . B 2 57 MET 57 57 MET MET B . B 2 58 MET 58 58 MET MET B . B 2 59 GLY 59 59 GLY GLY B . B 2 60 PRO 60 60 PRO PRO B . B 2 61 THR 61 61 THR THR B . B 2 62 GLY 62 62 GLY GLY B . B 2 63 VAL 63 63 VAL VAL B . B 2 64 GLY 64 64 GLY GLY B . B 2 65 LYS 65 65 LYS LYS B . B 2 66 THR 66 66 THR THR B . B 2 67 GLU 67 67 GLU GLU B . B 2 68 ILE 68 68 ILE ILE B . B 2 69 ALA 69 69 ALA ALA B . B 2 70 ARG 70 70 ARG ARG B . B 2 71 ARG 71 71 ARG ARG B . B 2 72 ILE 72 72 ILE ILE B . B 2 73 ALA 73 73 ALA ALA B . B 2 74 LYS 74 74 LYS LYS B . B 2 75 LEU 75 75 LEU LEU B . B 2 76 SER 76 76 SER SER B . B 2 77 GLY 77 77 GLY GLY B . B 2 78 ALA 78 78 ALA ALA B . B 2 79 PRO 79 79 PRO PRO B . B 2 80 PHE 80 80 PHE PHE B . B 2 81 ILE 81 81 ILE ILE B . B 2 82 LYS 82 82 LYS LYS B . B 2 83 ILE 83 83 ILE ILE B . B 2 84 GLU 84 84 GLU GLU B . B 2 85 ALA 85 85 ALA ALA B . B 2 86 THR 86 86 THR THR B . B 2 87 LYS 87 87 LYS LYS B . B 2 88 PHE 88 88 PHE PHE B . B 2 89 THR 89 89 THR THR B . B 2 90 GLU 90 90 GLU GLU B . B 2 91 VAL 91 91 VAL VAL B . B 2 92 GLY 92 92 GLY GLY B . B 2 93 TYR 93 93 TYR TYR B . B 2 94 VAL 94 94 VAL VAL B . B 2 95 GLY 95 95 GLY GLY B . B 2 96 ARG 96 96 ARG ARG B . B 2 97 ASP 97 97 ASP ASP B . B 2 98 VAL 98 98 VAL VAL B . B 2 99 GLU 99 99 GLU GLU B . B 2 100 SER 100 100 SER SER B . B 2 101 MET 101 101 MET MET B . B 2 102 VAL 102 102 VAL VAL B . B 2 103 ARG 103 103 ARG ARG B . B 2 104 ASP 104 104 ASP ASP B . B 2 105 LEU 105 105 LEU LEU B . B 2 106 VAL 106 106 VAL VAL B . B 2 107 GLU 107 107 GLU GLU B . B 2 108 THR 108 108 THR THR B . B 2 109 SER 109 109 SER SER B . B 2 110 VAL 110 110 VAL VAL B . B 2 111 ARG 111 111 ARG ARG B . B 2 112 LEU 112 112 LEU LEU B . B 2 113 ILE 113 113 ILE ILE B . B 2 114 LYS 114 114 LYS LYS B . B 2 115 GLU 115 115 GLU GLU B . B 2 116 GLU 116 116 GLU GLU B . B 2 117 LYS 117 117 LYS LYS B . B 2 118 MET 118 118 MET MET B . B 2 119 ASN 119 119 ASN ASN B . B 2 120 GLU 120 120 GLU GLU B . B 2 121 VAL 121 121 VAL VAL B . B 2 122 LYS 122 122 LYS LYS B . B 2 123 GLU 123 123 GLU GLU B . B 2 124 GLN 124 124 GLN GLN B . B 2 125 ALA 125 125 ALA ALA B . B 2 126 GLU 126 126 GLU GLU B . B 2 127 GLU 127 127 GLU GLU B . B 2 128 ASN 128 128 ASN ASN B . B 2 129 ALA 129 129 ALA ALA B . B 2 130 ASN 130 130 ASN ASN B . B 2 131 LYS 131 131 LYS LYS B . B 2 132 ARG 132 132 ARG ARG B . B 2 133 ILE 133 133 ILE ILE B . B 2 134 VAL 134 134 VAL VAL B . B 2 135 ARG 135 135 ARG ARG B . B 2 136 LEU 136 136 LEU LEU B . B 2 137 LEU 137 137 LEU LEU B . B 2 138 VAL 138 138 VAL VAL B . B 2 139 PRO 139 139 PRO PRO B . B 2 140 GLY 140 140 GLY GLY B . B 2 141 LYS 141 141 LYS LYS B . B 2 142 LYS 142 142 LYS LYS B . B 2 143 LYS 143 143 LYS LYS B . B 2 144 GLN 144 144 GLN GLN B . B 2 145 SER 145 145 SER SER B . B 2 146 GLY 146 146 GLY GLY B . B 2 147 VAL 147 147 VAL VAL B . B 2 148 LYS 148 148 LYS LYS B . B 2 149 ASN 149 149 ASN ASN B . B 2 150 PRO 150 150 PRO PRO B . B 2 151 PHE 151 151 PHE PHE B . B 2 152 GLU 152 152 GLU GLU B . B 2 153 MET 153 153 MET MET B . B 2 154 PHE 154 154 PHE PHE B . B 2 155 PHE 155 155 PHE PHE B . B 2 156 GLY 156 156 GLY GLY B . B 2 157 GLY 157 157 GLY GLY B . B 2 158 SER 158 158 SER SER B . B 2 159 GLN 159 159 GLN GLN B . B 2 160 PRO 160 160 PRO PRO B . B 2 161 ASN 161 161 ASN ASN B . B 2 162 GLY 162 162 GLY GLY B . B 2 163 GLU 163 163 GLU GLU B . B 2 164 ASP 164 164 ASP ASP B . B 2 165 GLU 165 165 GLU GLU B . B 2 166 ALA 166 166 ALA ALA B . B 2 167 GLU 167 167 GLU GLU B . B 2 168 SER 168 168 SER SER B . B 2 169 GLN 169 169 GLN GLN B . B 2 170 GLU 170 170 GLU GLU B . B 2 171 GLU 171 171 GLU GLU B . B 2 172 ALA 172 172 ALA ALA B . B 2 173 ASN 173 173 ASN ASN B . B 2 174 ILE 174 174 ILE ILE B . B 2 175 GLU 175 175 GLU GLU B . B 2 176 GLU 176 176 GLU GLU B . B 2 177 LYS 177 177 LYS LYS B . B 2 178 ARG 178 178 ARG ARG B . B 2 179 LYS 179 179 LYS LYS B . B 2 180 ARG 180 180 ARG ARG B . B 2 181 MET 181 181 MET MET B . B 2 182 ALA 182 182 ALA ALA B . B 2 183 HIS 183 183 HIS HIS B . B 2 184 GLN 184 184 GLN GLN B . B 2 185 LEU 185 185 LEU LEU B . B 2 186 ALA 186 186 ALA ALA B . B 2 187 LEU 187 187 LEU LEU B . B 2 188 GLY 188 188 GLY GLY B . B 2 189 GLU 189 189 GLU GLU B . B 2 190 LEU 190 190 LEU LEU B . B 2 191 GLU 191 191 GLU GLU B . B 2 192 ASP 192 192 ASP ASP B . B 2 193 TYR 193 193 TYR TYR B . B 2 194 TYR 194 194 TYR TYR B . B 2 195 VAL 195 195 VAL VAL B . B 2 196 THR 196 196 THR THR B . B 2 197 VAL 197 197 VAL VAL B . B 2 198 GLU 198 198 GLU GLU B . B 2 199 VAL 199 199 VAL VAL B . B 2 200 GLU 200 200 GLU GLU B . B 2 201 GLU 201 201 GLU GLU B . B 2 202 GLN 202 202 GLN GLN B . B 2 203 GLN 203 203 GLN GLN B . B 2 204 PRO 204 204 PRO PRO B . B 2 205 SER 205 205 SER SER B . B 2 206 MET 206 206 MET MET B . B 2 207 PHE 207 207 PHE PHE B . B 2 208 ASP 208 208 ASP ASP B . B 2 209 MET 209 209 MET MET B . B 2 210 LEU 210 210 LEU LEU B . B 2 211 GLN 211 211 GLN GLN B . B 2 212 GLY 212 212 GLY GLY B . B 2 213 SER 213 213 SER SER B . B 2 214 GLY 214 214 GLY GLY B . B 2 215 MET 215 215 MET MET B . B 2 216 GLU 216 216 GLU GLU B . B 2 217 GLN 217 217 GLN GLN B . B 2 218 MET 218 218 MET MET B . B 2 219 GLY 219 219 GLY GLY B . B 2 220 MET 220 220 MET MET B . B 2 221 ASN 221 221 ASN ASN B . B 2 222 MET 222 222 MET MET B . B 2 223 GLN 223 223 GLN GLN B . B 2 224 ASP 224 224 ASP ASP B . B 2 225 ALA 225 225 ALA ALA B . B 2 226 LEU 226 226 LEU LEU B . B 2 227 SER 227 227 SER SER B . B 2 228 GLY 228 228 GLY GLY B . B 2 229 LEU 229 229 LEU LEU B . B 2 230 MET 230 230 MET MET B . B 2 231 PRO 231 231 PRO PRO B . B 2 232 LYS 232 232 LYS LYS B . B 2 233 LYS 233 233 LYS LYS B . B 2 234 LYS 234 234 LYS LYS B . B 2 235 LYS 235 235 LYS LYS B . B 2 236 ARG 236 236 ARG ARG B . B 2 237 ARG 237 237 ARG ARG B . B 2 238 LYS 238 238 LYS LYS B . B 2 239 MET 239 239 MET MET B . B 2 240 THR 240 240 THR THR B . B 2 241 VAL 241 241 VAL VAL B . B 2 242 ARG 242 242 ARG ARG B . B 2 243 GLU 243 243 GLU GLU B . B 2 244 ALA 244 244 ALA ALA B . B 2 245 ARG 245 245 ARG ARG B . B 2 246 LYS 246 246 LYS LYS B . B 2 247 VAL 247 247 VAL VAL B . B 2 248 LEU 248 248 LEU LEU B . B 2 249 THR 249 249 THR THR B . B 2 250 ASN 250 250 ASN ASN B . B 2 251 GLU 251 251 GLU GLU B . B 2 252 GLU 252 252 GLU GLU B . B 2 253 ALA 253 253 ALA ALA B . B 2 254 SER 254 254 SER SER B . B 2 255 LYS 255 255 LYS LYS B . B 2 256 LEU 256 256 LEU LEU B . B 2 257 ILE 257 257 ILE ILE B . B 2 258 ASP 258 258 ASP ASP B . B 2 259 MET 259 259 MET MET B . B 2 260 ASP 260 260 ASP ASP B . B 2 261 GLU 261 261 GLU GLU B . B 2 262 VAL 262 262 VAL VAL B . B 2 263 GLY 263 263 GLY GLY B . B 2 264 GLN 264 264 GLN GLN B . B 2 265 GLU 265 265 GLU GLU B . B 2 266 ALA 266 266 ALA ALA B . B 2 267 VAL 267 267 VAL VAL B . B 2 268 GLN 268 268 GLN GLN B . B 2 269 ARG 269 269 ARG ARG B . B 2 270 ALA 270 270 ALA ALA B . B 2 271 GLU 271 271 GLU GLU B . B 2 272 GLU 272 272 GLU GLU B . B 2 273 SER 273 273 SER SER B . B 2 274 GLY 274 274 GLY GLY B . B 2 275 ILE 275 275 ILE ILE B . B 2 276 ILE 276 276 ILE ILE B . B 2 277 PHE 277 277 PHE PHE B . B 2 278 ILE 278 278 ILE ILE B . B 2 279 ASP 279 279 ASP ASP B . B 2 280 GLU 280 280 GLU GLU B . B 2 281 ILE 281 281 ILE ILE B . B 2 282 ASP 282 282 ASP ASP B . B 2 283 LYS 283 283 LYS LYS B . B 2 284 ILE 284 284 ILE ILE B . B 2 285 ALA 285 285 ALA ALA B . B 2 286 LYS 286 286 LYS LYS B . B 2 287 ASN 287 287 ASN ASN B . B 2 288 GLY 288 288 GLY GLY B . B 2 289 GLY 289 289 GLY GLY B . B 2 290 ALA 290 290 ALA ALA B . B 2 291 SER 291 291 SER SER B . B 2 292 SER 292 292 SER SER B . B 2 293 SER 293 293 SER SER B . B 2 294 ALA 294 294 ALA ALA B . B 2 295 ASP 295 295 ASP ASP B . B 2 296 VAL 296 296 VAL VAL B . B 2 297 SER 297 297 SER SER B . B 2 298 ARG 298 298 ARG ARG B . B 2 299 GLU 299 299 GLU GLU B . B 2 300 GLY 300 300 GLY GLY B . B 2 301 VAL 301 301 VAL VAL B . B 2 302 GLN 302 302 GLN GLN B . B 2 303 ARG 303 303 ARG ARG B . B 2 304 ASP 304 304 ASP ASP B . B 2 305 ILE 305 305 ILE ILE B . B 2 306 LEU 306 306 LEU LEU B . B 2 307 PRO 307 307 PRO PRO B . B 2 308 ILE 308 308 ILE ILE B . B 2 309 VAL 309 309 VAL VAL B . B 2 310 GLU 310 310 GLU GLU B . B 2 311 GLY 311 311 GLY GLY B . B 2 312 SER 312 312 SER SER B . B 2 313 THR 313 313 THR THR B . B 2 314 VAL 314 314 VAL VAL B . B 2 315 VAL 315 315 VAL VAL B . B 2 316 THR 316 316 THR THR B . B 2 317 LYS 317 317 LYS LYS B . B 2 318 TYR 318 318 TYR TYR B . B 2 319 GLY 319 319 GLY GLY B . B 2 320 SER 320 320 SER SER B . B 2 321 VAL 321 321 VAL VAL B . B 2 322 LYS 322 322 LYS LYS B . B 2 323 THR 323 323 THR THR B . B 2 324 ASP 324 324 ASP ASP B . B 2 325 HIS 325 325 HIS HIS B . B 2 326 VAL 326 326 VAL VAL B . B 2 327 LEU 327 327 LEU LEU B . B 2 328 PHE 328 328 PHE PHE B . B 2 329 ILE 329 329 ILE ILE B . B 2 330 ALA 330 330 ALA ALA B . B 2 331 ALA 331 331 ALA ALA B . B 2 332 GLY 332 332 GLY GLY B . B 2 333 ALA 333 333 ALA ALA B . B 2 334 PHE 334 334 PHE PHE B . B 2 335 HIS 335 335 HIS HIS B . B 2 336 MET 336 336 MET MET B . B 2 337 ALA 337 337 ALA ALA B . B 2 338 LYS 338 338 LYS LYS B . B 2 339 PRO 339 339 PRO PRO B . B 2 340 SER 340 340 SER SER B . B 2 341 ASP 341 341 ASP ASP B . B 2 342 LEU 342 342 LEU LEU B . B 2 343 ILE 343 343 ILE ILE B . B 2 344 PRO 344 344 PRO PRO B . B 2 345 GLU 345 345 GLU GLU B . B 2 346 LEU 346 346 LEU LEU B . B 2 347 GLN 347 347 GLN GLN B . B 2 348 GLY 348 348 GLY GLY B . B 2 349 ARG 349 349 ARG ARG B . B 2 350 PHE 350 350 PHE PHE B . B 2 351 PRO 351 351 PRO PRO B . B 2 352 ILE 352 352 ILE ILE B . B 2 353 ARG 353 353 ARG ARG B . B 2 354 VAL 354 354 VAL VAL B . B 2 355 GLU 355 355 GLU GLU B . B 2 356 LEU 356 356 LEU LEU B . B 2 357 ASN 357 357 ASN ASN B . B 2 358 LYS 358 358 LYS LYS B . B 2 359 LEU 359 359 LEU LEU B . B 2 360 THR 360 360 THR THR B . B 2 361 VAL 361 361 VAL VAL B . B 2 362 ASP 362 362 ASP ASP B . B 2 363 ASP 363 363 ASP ASP B . B 2 364 PHE 364 364 PHE PHE B . B 2 365 VAL 365 365 VAL VAL B . B 2 366 ARG 366 366 ARG ARG B . B 2 367 ILE 367 367 ILE ILE B . B 2 368 LEU 368 368 LEU LEU B . B 2 369 VAL 369 369 VAL VAL B . B 2 370 GLU 370 370 GLU GLU B . B 2 371 PRO 371 371 PRO PRO B . B 2 372 ASP 372 372 ASP ASP B . B 2 373 ASN 373 373 ASN ASN B . B 2 374 ALA 374 374 ALA ALA B . B 2 375 LEU 375 375 LEU LEU B . B 2 376 LEU 376 376 LEU LEU B . B 2 377 LYS 377 377 LYS LYS B . B 2 378 GLN 378 378 GLN GLN B . B 2 379 TYR 379 379 TYR TYR B . B 2 380 GLN 380 380 GLN GLN B . B 2 381 ALA 381 381 ALA ALA B . B 2 382 LEU 382 382 LEU LEU B . B 2 383 LEU 383 383 LEU LEU B . B 2 384 GLN 384 384 GLN GLN B . B 2 385 THR 385 385 THR THR B . B 2 386 GLU 386 386 GLU GLU B . B 2 387 GLY 387 387 GLY GLY B . B 2 388 ILE 388 388 ILE ILE B . B 2 389 SER 389 389 SER SER B . B 2 390 LEU 390 390 LEU LEU B . B 2 391 GLU 391 391 GLU GLU B . B 2 392 PHE 392 392 PHE PHE B . B 2 393 SER 393 393 SER SER B . B 2 394 ASP 394 394 ASP ASP B . B 2 395 GLU 395 395 GLU GLU B . B 2 396 ALA 396 396 ALA ALA B . B 2 397 ILE 397 397 ILE ILE B . B 2 398 HIS 398 398 HIS HIS B . B 2 399 LYS 399 399 LYS LYS B . B 2 400 ILE 400 400 ILE ILE B . B 2 401 ALA 401 401 ALA ALA B . B 2 402 GLU 402 402 GLU GLU B . B 2 403 VAL 403 403 VAL VAL B . B 2 404 ALA 404 404 ALA ALA B . B 2 405 TYR 405 405 TYR TYR B . B 2 406 HIS 406 406 HIS HIS B . B 2 407 VAL 407 407 VAL VAL B . B 2 408 ASN 408 408 ASN ASN B . B 2 409 GLN 409 409 GLN GLN B . B 2 410 ASP 410 410 ASP ASP B . B 2 411 THR 411 411 THR THR B . B 2 412 ASP 412 412 ASP ASP B . B 2 413 ASN 413 413 ASN ASN B . B 2 414 ILE 414 414 ILE ILE B . B 2 415 GLY 415 415 GLY GLY B . B 2 416 ALA 416 416 ALA ALA B . B 2 417 ARG 417 417 ARG ARG B . B 2 418 ARG 418 418 ARG ARG B . B 2 419 LEU 419 419 LEU LEU B . B 2 420 HIS 420 420 HIS HIS B . B 2 421 THR 421 421 THR THR B . B 2 422 ILE 422 422 ILE ILE B . B 2 423 LEU 423 423 LEU LEU B . B 2 424 GLU 424 424 GLU GLU B . B 2 425 ARG 425 425 ARG ARG B . B 2 426 LEU 426 426 LEU LEU B . B 2 427 LEU 427 427 LEU LEU B . B 2 428 GLU 428 428 GLU GLU B . B 2 429 ASP 429 429 ASP ASP B . B 2 430 LEU 430 430 LEU LEU B . B 2 431 SER 431 431 SER SER B . B 2 432 PHE 432 432 PHE PHE B . B 2 433 GLU 433 433 GLU GLU B . B 2 434 ALA 434 434 ALA ALA B . B 2 435 PRO 435 435 PRO PRO B . B 2 436 ASP 436 436 ASP ASP B . B 2 437 VAL 437 437 VAL VAL B . B 2 438 THR 438 438 THR THR B . B 2 439 MET 439 439 MET MET B . B 2 440 GLU 440 440 GLU GLU B . B 2 441 LYS 441 441 LYS LYS B . B 2 442 ILE 442 442 ILE ILE B . B 2 443 THR 443 443 THR THR B . B 2 444 ILE 444 444 ILE ILE B . B 2 445 THR 445 445 THR THR B . B 2 446 PRO 446 446 PRO PRO B . B 2 447 GLN 447 447 GLN GLN B . B 2 448 TYR 448 448 TYR TYR B . B 2 449 VAL 449 449 VAL VAL B . B 2 450 GLU 450 450 GLU GLU B . B 2 451 GLU 451 451 GLU GLU B . B 2 452 LYS 452 452 LYS LYS B . B 2 453 LEU 453 453 LEU LEU B . B 2 454 GLY 454 454 GLY GLY B . B 2 455 THR 455 455 THR THR B . B 2 456 ILE 456 456 ILE ILE B . B 2 457 ALA 457 457 ALA ALA B . B 2 458 LYS 458 458 LYS LYS B . B 2 459 ASN 459 459 ASN ASN B . B 2 460 LYS 460 460 LYS LYS B . B 2 461 ASP 461 461 ASP ASP B . B 2 462 LEU 462 462 LEU LEU B . B 2 463 SER 463 463 SER SER B . B 2 464 GLN 464 464 GLN GLN B . B 2 465 PHE 465 465 PHE PHE B . B 2 466 ILE 466 466 ILE ILE B . B 2 467 LEU 467 467 LEU LEU B . # # loop_ # #