data_9A61 # _entry.id 9A61 # loop_ _atom_type.symbol C H N O S # loop_ _audit_author.name _audit_author.pdbx_ordinal "Stahl, K." 1 "Brock, O." 2 "Rappsilber, J." 3 # loop_ _audit_conform.dict_location _audit_conform.dict_name _audit_conform.dict_version https://mmcif.wwpdb.org/dictionaries/ascii/mmcif_ihm_ext.dic mmcif_ihm_ext.dic 1.26 http://mmcif.wwpdb.org/dictionaries/ascii/mmcif_pdbx_v50.dic mmcif_pdbx.dic 5.395 # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 9A61 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2024-01-23 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2024-09-18 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 9A61 pdb_00009a61 10.2210/pdb9a61/pdb PDB-Dev PDBDEV_00000294 PDBDEV_00000294 ? # _ihm_entry_collection.id PDBDEV_G_1000003 _ihm_entry_collection.name . _ihm_entry_collection.details 'Collection of entries belonging to the publication: "Modelling protein complexes with crosslinking mass spectrometry and deep learning"' # _ihm_entry_collection_mapping.collection_id PDBDEV_G_1000003 _ihm_entry_collection_mapping.entry_id 9A61 # loop_ _chem_comp.formula _chem_comp.formula_weight _chem_comp.id _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.type "C3 H7 N O2" 89.094 ALA . ALANINE . "L-peptide linking" "C6 H15 N4 O2 1" 175.212 ARG . ARGININE . "L-peptide linking" "C4 H8 N2 O3" 132.119 ASN . ASPARAGINE . "L-peptide linking" "C4 H7 N O4" 133.103 ASP . "ASPARTIC ACID" . "L-peptide linking" "C3 H7 N O2 S" 121.154 CYS . CYSTEINE . "L-peptide linking" "C5 H10 N2 O3" 146.146 GLN . GLUTAMINE . "L-peptide linking" "C5 H9 N O4" 147.13 GLU . "GLUTAMIC ACID" . "L-peptide linking" "C2 H5 N O2" 75.067 GLY . GLYCINE . "peptide linking" "C6 H10 N3 O2 1" 156.165 HIS . HISTIDINE . "L-peptide linking" "C6 H13 N O2" 131.175 ILE . ISOLEUCINE . "L-peptide linking" "C6 H13 N O2" 131.175 LEU . LEUCINE . "L-peptide linking" "C6 H15 N2 O2 1" 147.198 LYS . LYSINE . "L-peptide linking" "C5 H11 N O2 S" 149.208 MET . METHIONINE . "L-peptide linking" "C9 H11 N O2" 165.192 PHE . PHENYLALANINE . "L-peptide linking" "C5 H9 N O2" 115.132 PRO . PROLINE . "L-peptide linking" "C3 H7 N O3" 105.093 SER . SERINE . "L-peptide linking" "C4 H9 N O3" 119.12 THR . THREONINE . "L-peptide linking" "C11 H12 N2 O2" 204.229 TRP . TRYPTOPHAN . "L-peptide linking" "C9 H11 N O3" 181.191 TYR . TYROSINE . "L-peptide linking" "C5 H11 N O2" 117.148 VAL . VALINE . "L-peptide linking" # _citation.country . _citation.id 1 _citation.journal_abbrev "Nat. Commun." _citation.journal_id_ASTM . _citation.journal_id_CSD . _citation.journal_id_ISSN . _citation.journal_issue . _citation.journal_volume 15 _citation.page_first 7866 _citation.page_last . _citation.pdbx_database_id_DOI 10.1038/s41467-024-51771-2 _citation.pdbx_database_id_PubMed 39251624 _citation.title "Modelling protein complexes with crosslinking mass spectrometry and deep learning" _citation.year 2024 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal 1 "Stahl, K." 1 1 "Warneke, R." 2 1 "Demann, L." 3 1 "Bremenkamp, R." 4 1 "Hormes, B." 5 1 "Brock, O." 6 1 "Stulke, J." 7 1 "Rappsilber, J." 8 # loop_ _entity.details _entity.formula_weight _entity.id _entity.pdbx_description _entity.pdbx_number_of_molecules _entity.src_method _entity.type . 18815.84 1 SUFU_BACSU 1 MAN POLYMER . 52271.594 2 SUFS_BACSU 1 MAN POLYMER # loop_ _entity_poly.entity_id _entity_poly.nstd_chirality _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_sequence_evidence_code _entity_poly.pdbx_strand_id _entity_poly.type 1 . NO NO MSFNANLDTLYRQVIMDHYKNPRNKGVLNDSIVVDMNNPTCGDRIRLTMKLDGDIVEDAKFEGEGCSISMASASMMTQAIKGKDIETALSMSKIFSDMMQGKEYDDSIDLGDIEALQGVSKFPARIKCATLSWKALEKGVAKEEGGN MSFNANLDTLYRQVIMDHYKNPRNKGVLNDSIVVDMNNPTCGDRIRLTMKLDGDIVEDAKFEGEGCSISMASASMMTQAIKGKDIETALSMSKIFSDMMQGKEYDDSIDLGDIEALQGVSKFPARIKCATLSWKALEKGVAKEEGGN . A polypeptide(L) 2 . NO NO MNITDIREQFPILHQQVNGHDLVYLDSAATSQKPRAVIETLDKYYNQYNSNVHRGVHTLGTRATDGYEGAREKVRKFINAKSMAEIIFTKGTTTSLNMVALSYARANLKPGDEVVITYMEHHANIIPWQQAVKATGATLKYIPLQEDGTISLEDVRETVTSNTKIVAVSHVSNVLGTVNPIKEMAKIAHDNGAVIVVDGAQSTPHMKIDVQDLDCDFFALSSHKMCGPTGVGVLYGKKALLENMEPAEFGGEMIDFVGLYESTWKELPWKFEAGTPIIAGAIGLGAAIDFLEEIGLDEISRHEHKLAAYALERFRQLDGVTVYGPEERAGLVTFNLDDVHPHDVATVLDAEGIAVRAGHHCAQPLMKWLDVTATARASFYLYNTEEEIDKLVEALQKTKEYFTNVF MNITDIREQFPILHQQVNGHDLVYLDSAATSQKPRAVIETLDKYYNQYNSNVHRGVHTLGTRATDGYEGAREKVRKFINAKSMAEIIFTKGTTTSLNMVALSYARANLKPGDEVVITYMEHHANIIPWQQAVKATGATLKYIPLQEDGTISLEDVRETVTSNTKIVAVSHVSNVLGTVNPIKEMAKIAHDNGAVIVVDGAQSTPHMKIDVQDLDCDFFALSSHKMCGPTGVGVLYGKKALLENMEPAEFGGEMIDFVGLYESTWKELPWKFEAGTPIIAGAIGLGAAIDFLEEIGLDEISRHEHKLAAYALERFRQLDGVTVYGPEERAGLVTFNLDDVHPHDVATVLDAEGIAVRAGHHCAQPLMKWLDVTATARASFYLYNTEEEIDKLVEALQKTKEYFTNVF . B polypeptide(L) # loop_ _entity_poly_seq.entity_id _entity_poly_seq.hetero _entity_poly_seq.mon_id _entity_poly_seq.num 1 . MET 1 1 . SER 2 1 . PHE 3 1 . ASN 4 1 . ALA 5 1 . ASN 6 1 . LEU 7 1 . ASP 8 1 . THR 9 1 . LEU 10 1 . TYR 11 1 . ARG 12 1 . GLN 13 1 . VAL 14 1 . ILE 15 1 . MET 16 1 . ASP 17 1 . HIS 18 1 . TYR 19 1 . LYS 20 1 . ASN 21 1 . PRO 22 1 . ARG 23 1 . ASN 24 1 . LYS 25 1 . GLY 26 1 . VAL 27 1 . LEU 28 1 . ASN 29 1 . ASP 30 1 . SER 31 1 . ILE 32 1 . VAL 33 1 . VAL 34 1 . ASP 35 1 . MET 36 1 . ASN 37 1 . ASN 38 1 . PRO 39 1 . THR 40 1 . CYS 41 1 . GLY 42 1 . ASP 43 1 . ARG 44 1 . ILE 45 1 . ARG 46 1 . LEU 47 1 . THR 48 1 . MET 49 1 . LYS 50 1 . LEU 51 1 . ASP 52 1 . GLY 53 1 . ASP 54 1 . ILE 55 1 . VAL 56 1 . GLU 57 1 . ASP 58 1 . ALA 59 1 . LYS 60 1 . PHE 61 1 . GLU 62 1 . GLY 63 1 . GLU 64 1 . GLY 65 1 . CYS 66 1 . SER 67 1 . ILE 68 1 . SER 69 1 . MET 70 1 . ALA 71 1 . SER 72 1 . ALA 73 1 . SER 74 1 . MET 75 1 . MET 76 1 . THR 77 1 . GLN 78 1 . ALA 79 1 . ILE 80 1 . LYS 81 1 . GLY 82 1 . LYS 83 1 . ASP 84 1 . ILE 85 1 . GLU 86 1 . THR 87 1 . ALA 88 1 . LEU 89 1 . SER 90 1 . MET 91 1 . SER 92 1 . LYS 93 1 . ILE 94 1 . PHE 95 1 . SER 96 1 . ASP 97 1 . MET 98 1 . MET 99 1 . GLN 100 1 . GLY 101 1 . LYS 102 1 . GLU 103 1 . TYR 104 1 . ASP 105 1 . ASP 106 1 . SER 107 1 . ILE 108 1 . ASP 109 1 . LEU 110 1 . GLY 111 1 . ASP 112 1 . ILE 113 1 . GLU 114 1 . ALA 115 1 . LEU 116 1 . GLN 117 1 . GLY 118 1 . VAL 119 1 . SER 120 1 . LYS 121 1 . PHE 122 1 . PRO 123 1 . ALA 124 1 . ARG 125 1 . ILE 126 1 . LYS 127 1 . CYS 128 1 . ALA 129 1 . THR 130 1 . LEU 131 1 . SER 132 1 . TRP 133 1 . LYS 134 1 . ALA 135 1 . LEU 136 1 . GLU 137 1 . LYS 138 1 . GLY 139 1 . VAL 140 1 . ALA 141 1 . LYS 142 1 . GLU 143 1 . GLU 144 1 . GLY 145 1 . GLY 146 1 . ASN 147 2 . MET 1 2 . ASN 2 2 . ILE 3 2 . THR 4 2 . ASP 5 2 . ILE 6 2 . ARG 7 2 . GLU 8 2 . GLN 9 2 . PHE 10 2 . PRO 11 2 . ILE 12 2 . LEU 13 2 . HIS 14 2 . GLN 15 2 . GLN 16 2 . VAL 17 2 . ASN 18 2 . GLY 19 2 . HIS 20 2 . ASP 21 2 . LEU 22 2 . VAL 23 2 . TYR 24 2 . LEU 25 2 . ASP 26 2 . SER 27 2 . ALA 28 2 . ALA 29 2 . THR 30 2 . SER 31 2 . GLN 32 2 . LYS 33 2 . PRO 34 2 . ARG 35 2 . ALA 36 2 . VAL 37 2 . ILE 38 2 . GLU 39 2 . THR 40 2 . LEU 41 2 . ASP 42 2 . LYS 43 2 . TYR 44 2 . TYR 45 2 . ASN 46 2 . GLN 47 2 . TYR 48 2 . ASN 49 2 . SER 50 2 . ASN 51 2 . VAL 52 2 . HIS 53 2 . ARG 54 2 . GLY 55 2 . VAL 56 2 . HIS 57 2 . THR 58 2 . LEU 59 2 . GLY 60 2 . THR 61 2 . ARG 62 2 . ALA 63 2 . THR 64 2 . ASP 65 2 . GLY 66 2 . TYR 67 2 . GLU 68 2 . GLY 69 2 . ALA 70 2 . ARG 71 2 . GLU 72 2 . LYS 73 2 . VAL 74 2 . ARG 75 2 . LYS 76 2 . PHE 77 2 . ILE 78 2 . ASN 79 2 . ALA 80 2 . LYS 81 2 . SER 82 2 . MET 83 2 . ALA 84 2 . GLU 85 2 . ILE 86 2 . ILE 87 2 . PHE 88 2 . THR 89 2 . LYS 90 2 . GLY 91 2 . THR 92 2 . THR 93 2 . THR 94 2 . SER 95 2 . LEU 96 2 . ASN 97 2 . MET 98 2 . VAL 99 2 . ALA 100 2 . LEU 101 2 . SER 102 2 . TYR 103 2 . ALA 104 2 . ARG 105 2 . ALA 106 2 . ASN 107 2 . LEU 108 2 . LYS 109 2 . PRO 110 2 . GLY 111 2 . ASP 112 2 . GLU 113 2 . VAL 114 2 . VAL 115 2 . ILE 116 2 . THR 117 2 . TYR 118 2 . MET 119 2 . GLU 120 2 . HIS 121 2 . HIS 122 2 . ALA 123 2 . ASN 124 2 . ILE 125 2 . ILE 126 2 . PRO 127 2 . TRP 128 2 . GLN 129 2 . GLN 130 2 . ALA 131 2 . VAL 132 2 . LYS 133 2 . ALA 134 2 . THR 135 2 . GLY 136 2 . ALA 137 2 . THR 138 2 . LEU 139 2 . LYS 140 2 . TYR 141 2 . ILE 142 2 . PRO 143 2 . LEU 144 2 . GLN 145 2 . GLU 146 2 . ASP 147 2 . GLY 148 2 . THR 149 2 . ILE 150 2 . SER 151 2 . LEU 152 2 . GLU 153 2 . ASP 154 2 . VAL 155 2 . ARG 156 2 . GLU 157 2 . THR 158 2 . VAL 159 2 . THR 160 2 . SER 161 2 . ASN 162 2 . THR 163 2 . LYS 164 2 . ILE 165 2 . VAL 166 2 . ALA 167 2 . VAL 168 2 . SER 169 2 . HIS 170 2 . VAL 171 2 . SER 172 2 . ASN 173 2 . VAL 174 2 . LEU 175 2 . GLY 176 2 . THR 177 2 . VAL 178 2 . ASN 179 2 . PRO 180 2 . ILE 181 2 . LYS 182 2 . GLU 183 2 . MET 184 2 . ALA 185 2 . LYS 186 2 . ILE 187 2 . ALA 188 2 . HIS 189 2 . ASP 190 2 . ASN 191 2 . GLY 192 2 . ALA 193 2 . VAL 194 2 . ILE 195 2 . VAL 196 2 . VAL 197 2 . ASP 198 2 . GLY 199 2 . ALA 200 2 . GLN 201 2 . SER 202 2 . THR 203 2 . PRO 204 2 . HIS 205 2 . MET 206 2 . LYS 207 2 . ILE 208 2 . ASP 209 2 . VAL 210 2 . GLN 211 2 . ASP 212 2 . LEU 213 2 . ASP 214 2 . CYS 215 2 . ASP 216 2 . PHE 217 2 . PHE 218 2 . ALA 219 2 . LEU 220 2 . SER 221 2 . SER 222 2 . HIS 223 2 . LYS 224 2 . MET 225 2 . CYS 226 2 . GLY 227 2 . PRO 228 2 . THR 229 2 . GLY 230 2 . VAL 231 2 . GLY 232 2 . VAL 233 2 . LEU 234 2 . TYR 235 2 . GLY 236 2 . LYS 237 2 . LYS 238 2 . ALA 239 2 . LEU 240 2 . LEU 241 2 . GLU 242 2 . ASN 243 2 . MET 244 2 . GLU 245 2 . PRO 246 2 . ALA 247 2 . GLU 248 2 . PHE 249 2 . GLY 250 2 . GLY 251 2 . GLU 252 2 . MET 253 2 . ILE 254 2 . ASP 255 2 . PHE 256 2 . VAL 257 2 . GLY 258 2 . LEU 259 2 . TYR 260 2 . GLU 261 2 . SER 262 2 . THR 263 2 . TRP 264 2 . LYS 265 2 . GLU 266 2 . LEU 267 2 . PRO 268 2 . TRP 269 2 . LYS 270 2 . PHE 271 2 . GLU 272 2 . ALA 273 2 . GLY 274 2 . THR 275 2 . PRO 276 2 . ILE 277 2 . ILE 278 2 . ALA 279 2 . GLY 280 2 . ALA 281 2 . ILE 282 2 . GLY 283 2 . LEU 284 2 . GLY 285 2 . ALA 286 2 . ALA 287 2 . ILE 288 2 . ASP 289 2 . PHE 290 2 . LEU 291 2 . GLU 292 2 . GLU 293 2 . ILE 294 2 . GLY 295 2 . LEU 296 2 . ASP 297 2 . GLU 298 2 . ILE 299 2 . SER 300 2 . ARG 301 2 . HIS 302 2 . GLU 303 2 . HIS 304 2 . LYS 305 2 . LEU 306 2 . ALA 307 2 . ALA 308 2 . TYR 309 2 . ALA 310 2 . LEU 311 2 . GLU 312 2 . ARG 313 2 . PHE 314 2 . ARG 315 2 . GLN 316 2 . LEU 317 2 . ASP 318 2 . GLY 319 2 . VAL 320 2 . THR 321 2 . VAL 322 2 . TYR 323 2 . GLY 324 2 . PRO 325 2 . GLU 326 2 . GLU 327 2 . ARG 328 2 . ALA 329 2 . GLY 330 2 . LEU 331 2 . VAL 332 2 . THR 333 2 . PHE 334 2 . ASN 335 2 . LEU 336 2 . ASP 337 2 . ASP 338 2 . VAL 339 2 . HIS 340 2 . PRO 341 2 . HIS 342 2 . ASP 343 2 . VAL 344 2 . ALA 345 2 . THR 346 2 . VAL 347 2 . LEU 348 2 . ASP 349 2 . ALA 350 2 . GLU 351 2 . GLY 352 2 . ILE 353 2 . ALA 354 2 . VAL 355 2 . ARG 356 2 . ALA 357 2 . GLY 358 2 . HIS 359 2 . HIS 360 2 . CYS 361 2 . ALA 362 2 . GLN 363 2 . PRO 364 2 . LEU 365 2 . MET 366 2 . LYS 367 2 . TRP 368 2 . LEU 369 2 . ASP 370 2 . VAL 371 2 . THR 372 2 . ALA 373 2 . THR 374 2 . ALA 375 2 . ARG 376 2 . ALA 377 2 . SER 378 2 . PHE 379 2 . TYR 380 2 . LEU 381 2 . TYR 382 2 . ASN 383 2 . THR 384 2 . GLU 385 2 . GLU 386 2 . GLU 387 2 . ILE 388 2 . ASP 389 2 . LYS 390 2 . LEU 391 2 . VAL 392 2 . GLU 393 2 . ALA 394 2 . LEU 395 2 . GLN 396 2 . LYS 397 2 . THR 398 2 . LYS 399 2 . GLU 400 2 . TYR 401 2 . PHE 402 2 . THR 403 2 . ASN 404 2 . VAL 405 2 . PHE 406 # _ihm_chemical_component_descriptor.auth_name SDA _ihm_chemical_component_descriptor.chemical_name "succinimidyl 4,4'-azipentanoate" _ihm_chemical_component_descriptor.common_name . _ihm_chemical_component_descriptor.details . _ihm_chemical_component_descriptor.id 1 _ihm_chemical_component_descriptor.inchi 1S/C9H11N3O4/c1-9(10-11-9)5-4-8(15)16-12-6(13)2-3-7(12)14/h2-5H2,1H3 _ihm_chemical_component_descriptor.inchi_key " SYYLQNPWAPHRFV-UHFFFAOYSA-N" _ihm_chemical_component_descriptor.smiles CC1(N=N1)CCC(ON2C(CCC2=O)=O)=O _ihm_chemical_component_descriptor.smiles_canonical . # _ihm_cross_link_list.comp_id_1 SER _ihm_cross_link_list.comp_id_2 LYS _ihm_cross_link_list.dataset_list_id 1 _ihm_cross_link_list.details . _ihm_cross_link_list.entity_description_1 SUFU_BACSU _ihm_cross_link_list.entity_description_2 SUFS_BACSU _ihm_cross_link_list.entity_id_1 1 _ihm_cross_link_list.entity_id_2 2 _ihm_cross_link_list.group_id 1 _ihm_cross_link_list.id 1 _ihm_cross_link_list.linker_chem_comp_descriptor_id 1 _ihm_cross_link_list.linker_type SDA _ihm_cross_link_list.seq_id_1 2 _ihm_cross_link_list.seq_id_2 397 # _ihm_cross_link_restraint.asym_id_1 A _ihm_cross_link_restraint.asym_id_2 B _ihm_cross_link_restraint.atom_id_1 . _ihm_cross_link_restraint.atom_id_2 . _ihm_cross_link_restraint.comp_id_1 SER _ihm_cross_link_restraint.comp_id_2 LYS _ihm_cross_link_restraint.conditional_crosslink_flag . _ihm_cross_link_restraint.distance_threshold 25 _ihm_cross_link_restraint.entity_id_1 1 _ihm_cross_link_restraint.entity_id_2 2 _ihm_cross_link_restraint.group_id 1 _ihm_cross_link_restraint.id 1 _ihm_cross_link_restraint.model_granularity by-residue _ihm_cross_link_restraint.pseudo_site_flag NO _ihm_cross_link_restraint.psi 0.95 _ihm_cross_link_restraint.restraint_type "upper bound" _ihm_cross_link_restraint.seq_id_1 2 _ihm_cross_link_restraint.seq_id_2 397 _ihm_cross_link_restraint.sigma_1 . _ihm_cross_link_restraint.sigma_2 . # _ihm_dataset_group.application . _ihm_dataset_group.details . _ihm_dataset_group.id 1 _ihm_dataset_group.name . # _ihm_dataset_group_link.dataset_list_id 1 _ihm_dataset_group_link.group_id 1 # _ihm_dataset_list.data_type "Crosslinking-MS data" _ihm_dataset_list.database_hosted YES _ihm_dataset_list.details . _ihm_dataset_list.id 1 # _ihm_dataset_related_db_reference.accession_code PXD035508 _ihm_dataset_related_db_reference.dataset_list_id 1 _ihm_dataset_related_db_reference.db_name PRIDE _ihm_dataset_related_db_reference.details . _ihm_dataset_related_db_reference.id 1 _ihm_dataset_related_db_reference.version . # loop_ _ihm_entity_poly_segment.comp_id_begin _ihm_entity_poly_segment.comp_id_end _ihm_entity_poly_segment.entity_id _ihm_entity_poly_segment.id _ihm_entity_poly_segment.seq_id_begin _ihm_entity_poly_segment.seq_id_end MET ASN 1 1 1 147 MET PHE 2 2 1 406 # _ihm_model_group.details . _ihm_model_group.id 1 _ihm_model_group.name . # _ihm_model_group_link.group_id 1 _ihm_model_group_link.model_id 1 # _ihm_model_list.assembly_id 1 _ihm_model_list.model_id 1 _ihm_model_list.model_name . _ihm_model_list.protocol_id 1 _ihm_model_list.representation_id 1 # _ihm_model_representation.details . _ihm_model_representation.id 1 _ihm_model_representation.name . # loop_ _ihm_model_representation_details.description _ihm_model_representation_details.entity_asym_id _ihm_model_representation_details.entity_description _ihm_model_representation_details.entity_id _ihm_model_representation_details.entity_poly_segment_id _ihm_model_representation_details.id _ihm_model_representation_details.model_granularity _ihm_model_representation_details.model_mode _ihm_model_representation_details.model_object_count _ihm_model_representation_details.model_object_primitive _ihm_model_representation_details.representation_id _ihm_model_representation_details.starting_model_id . A SUFU_BACSU 1 1 1 by-atom flexible . atomistic 1 . . B SUFS_BACSU 2 2 2 by-atom flexible . atomistic 1 . # _ihm_modeling_protocol.details . _ihm_modeling_protocol.id 1 _ihm_modeling_protocol.num_steps 1 _ihm_modeling_protocol.protocol_name AlphaLink2 # _ihm_modeling_protocol_details.dataset_group_id 1 _ihm_modeling_protocol_details.description . _ihm_modeling_protocol_details.ensemble_flag NO _ihm_modeling_protocol_details.id 1 _ihm_modeling_protocol_details.multi_scale_flag NO _ihm_modeling_protocol_details.multi_state_flag NO _ihm_modeling_protocol_details.num_models_begin 0 _ihm_modeling_protocol_details.num_models_end 1 _ihm_modeling_protocol_details.ordered_flag NO _ihm_modeling_protocol_details.protocol_id 1 _ihm_modeling_protocol_details.script_file_id . _ihm_modeling_protocol_details.software_id 1 _ihm_modeling_protocol_details.step_id 1 _ihm_modeling_protocol_details.step_method AlphaLink2 _ihm_modeling_protocol_details.step_name AlphaLink2 _ihm_modeling_protocol_details.struct_assembly_description . _ihm_modeling_protocol_details.struct_assembly_id 1 # _ihm_struct_assembly.description "Integrative model of SUFU-SUFS by crosslinking MS and deep learning" _ihm_struct_assembly.id 1 _ihm_struct_assembly.name SUFU-SUFS # loop_ _ihm_struct_assembly_details.assembly_id _ihm_struct_assembly_details.asym_id _ihm_struct_assembly_details.entity_description _ihm_struct_assembly_details.entity_id _ihm_struct_assembly_details.entity_poly_segment_id _ihm_struct_assembly_details.id _ihm_struct_assembly_details.parent_assembly_id 1 A SUFU_BACSU 1 1 1 1 1 B SUFS_BACSU 2 2 2 1 # _software.citation_id 1 _software.classification "model building" _software.description "Modelling protein complexes with crosslinking mass spectrometry and deep learning" _software.location https://github.com/Rappsilber-Laboratory/AlphaLink2 _software.name AlphaLink2 _software.pdbx_ordinal 1 _software.type program _software.version 1.0 # _struct.entry_id 9A61 _struct.pdbx_CASP_flag . _struct.pdbx_descriptor . _struct.pdbx_details . _struct.pdbx_model_details . _struct.pdbx_model_type_details . _struct.pdbx_structure_determination_methodology integrative _struct.title "Integrative model of SUFU-SUFS by crosslinking MS and deep learning" # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_PDB_id _struct_asym.pdbx_alt_id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.pdbx_order _struct_asym.pdbx_type SUFU_BACSU 1 A . . . . . . SUFS_BACSU 2 B . . . . . . # loop_ _struct_ref.db_code _struct_ref.db_name _struct_ref.details _struct_ref.entity_id _struct_ref.id _struct_ref.pdbx_align_begin _struct_ref.pdbx_align_end _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.pdbx_seq_one_letter_code A UNP . 1 1 1 . O32163 . MSFNANLDTLYRQVIMDHYKNPRNKGVLNDSIVVDMNNPTCGDRIRLTMKLDGDIVEDAKFEGEGCSISMASASMMTQAIKGKDIETALSMSKIFSDMMQGKEYDDSIDLGDIEALQGVSKFPARIKCATLSWKALEKGVAKEEGGN B UNP . 2 2 1 . O32164 . MNITDIREQFPILHQQVNGHDLVYLDSAATSQKPRAVIETLDKYYNQYNSNVHRGVHTLGTRATDGYEGAREKVRKFINAKSMAEIIFTKGTTTSLNMVALSYARANLKPGDEVVITYMEHHANIIPWQQAVKATGATLKYIPLQEDGTISLEDVRETVTSNTKIVAVSHVSNVLGTVNPIKEMAKIAHDNGAVIVVDGAQSTPHMKIDVQDLDCDFFALSSHKMCGPTGVGVLYGKKALLENMEPAEFGGEMIDFVGLYESTWKELPWKFEAGTPIIAGAIGLGAAIDFLEEIGLDEISRHEHKLAAYALERFRQLDGVTVYGPEERAGLVTFNLDDVHPHDVATVLDAEGIAVRAGHHCAQPLMKWLDVTATARASFYLYNTEEEIDKLVEALQKTKEYFTNVF # loop_ _struct_ref_seq.align_id _struct_ref_seq.db_align_beg _struct_ref_seq.db_align_end _struct_ref_seq.ref_id _struct_ref_seq.seq_align_beg _struct_ref_seq.seq_align_end 1 1 147 1 1 147 2 1 406 2 1 406 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code A 1 1 MET 1 1 MET MET A . A 1 2 SER 2 2 SER SER A . A 1 3 PHE 3 3 PHE PHE A . A 1 4 ASN 4 4 ASN ASN A . A 1 5 ALA 5 5 ALA ALA A . A 1 6 ASN 6 6 ASN ASN A . A 1 7 LEU 7 7 LEU LEU A . A 1 8 ASP 8 8 ASP ASP A . A 1 9 THR 9 9 THR THR A . A 1 10 LEU 10 10 LEU LEU A . A 1 11 TYR 11 11 TYR TYR A . A 1 12 ARG 12 12 ARG ARG A . A 1 13 GLN 13 13 GLN GLN A . A 1 14 VAL 14 14 VAL VAL A . A 1 15 ILE 15 15 ILE ILE A . A 1 16 MET 16 16 MET MET A . A 1 17 ASP 17 17 ASP ASP A . A 1 18 HIS 18 18 HIS HIS A . A 1 19 TYR 19 19 TYR TYR A . A 1 20 LYS 20 20 LYS LYS A . A 1 21 ASN 21 21 ASN ASN A . A 1 22 PRO 22 22 PRO PRO A . A 1 23 ARG 23 23 ARG ARG A . A 1 24 ASN 24 24 ASN ASN A . A 1 25 LYS 25 25 LYS LYS A . A 1 26 GLY 26 26 GLY GLY A . A 1 27 VAL 27 27 VAL VAL A . A 1 28 LEU 28 28 LEU LEU A . A 1 29 ASN 29 29 ASN ASN A . A 1 30 ASP 30 30 ASP ASP A . A 1 31 SER 31 31 SER SER A . A 1 32 ILE 32 32 ILE ILE A . A 1 33 VAL 33 33 VAL VAL A . A 1 34 VAL 34 34 VAL VAL A . A 1 35 ASP 35 35 ASP ASP A . A 1 36 MET 36 36 MET MET A . A 1 37 ASN 37 37 ASN ASN A . A 1 38 ASN 38 38 ASN ASN A . A 1 39 PRO 39 39 PRO PRO A . A 1 40 THR 40 40 THR THR A . A 1 41 CYS 41 41 CYS CYS A . A 1 42 GLY 42 42 GLY GLY A . A 1 43 ASP 43 43 ASP ASP A . A 1 44 ARG 44 44 ARG ARG A . A 1 45 ILE 45 45 ILE ILE A . A 1 46 ARG 46 46 ARG ARG A . A 1 47 LEU 47 47 LEU LEU A . A 1 48 THR 48 48 THR THR A . A 1 49 MET 49 49 MET MET A . A 1 50 LYS 50 50 LYS LYS A . A 1 51 LEU 51 51 LEU LEU A . A 1 52 ASP 52 52 ASP ASP A . A 1 53 GLY 53 53 GLY GLY A . A 1 54 ASP 54 54 ASP ASP A . A 1 55 ILE 55 55 ILE ILE A . A 1 56 VAL 56 56 VAL VAL A . A 1 57 GLU 57 57 GLU GLU A . A 1 58 ASP 58 58 ASP ASP A . A 1 59 ALA 59 59 ALA ALA A . A 1 60 LYS 60 60 LYS LYS A . A 1 61 PHE 61 61 PHE PHE A . A 1 62 GLU 62 62 GLU GLU A . A 1 63 GLY 63 63 GLY GLY A . A 1 64 GLU 64 64 GLU GLU A . A 1 65 GLY 65 65 GLY GLY A . A 1 66 CYS 66 66 CYS CYS A . A 1 67 SER 67 67 SER SER A . A 1 68 ILE 68 68 ILE ILE A . A 1 69 SER 69 69 SER SER A . A 1 70 MET 70 70 MET MET A . A 1 71 ALA 71 71 ALA ALA A . A 1 72 SER 72 72 SER SER A . A 1 73 ALA 73 73 ALA ALA A . A 1 74 SER 74 74 SER SER A . A 1 75 MET 75 75 MET MET A . A 1 76 MET 76 76 MET MET A . A 1 77 THR 77 77 THR THR A . A 1 78 GLN 78 78 GLN GLN A . A 1 79 ALA 79 79 ALA ALA A . A 1 80 ILE 80 80 ILE ILE A . A 1 81 LYS 81 81 LYS LYS A . A 1 82 GLY 82 82 GLY GLY A . A 1 83 LYS 83 83 LYS LYS A . A 1 84 ASP 84 84 ASP ASP A . A 1 85 ILE 85 85 ILE ILE A . A 1 86 GLU 86 86 GLU GLU A . A 1 87 THR 87 87 THR THR A . A 1 88 ALA 88 88 ALA ALA A . A 1 89 LEU 89 89 LEU LEU A . A 1 90 SER 90 90 SER SER A . A 1 91 MET 91 91 MET MET A . A 1 92 SER 92 92 SER SER A . A 1 93 LYS 93 93 LYS LYS A . A 1 94 ILE 94 94 ILE ILE A . A 1 95 PHE 95 95 PHE PHE A . A 1 96 SER 96 96 SER SER A . A 1 97 ASP 97 97 ASP ASP A . A 1 98 MET 98 98 MET MET A . A 1 99 MET 99 99 MET MET A . A 1 100 GLN 100 100 GLN GLN A . A 1 101 GLY 101 101 GLY GLY A . A 1 102 LYS 102 102 LYS LYS A . A 1 103 GLU 103 103 GLU GLU A . A 1 104 TYR 104 104 TYR TYR A . A 1 105 ASP 105 105 ASP ASP A . A 1 106 ASP 106 106 ASP ASP A . A 1 107 SER 107 107 SER SER A . A 1 108 ILE 108 108 ILE ILE A . A 1 109 ASP 109 109 ASP ASP A . A 1 110 LEU 110 110 LEU LEU A . A 1 111 GLY 111 111 GLY GLY A . A 1 112 ASP 112 112 ASP ASP A . A 1 113 ILE 113 113 ILE ILE A . A 1 114 GLU 114 114 GLU GLU A . A 1 115 ALA 115 115 ALA ALA A . A 1 116 LEU 116 116 LEU LEU A . A 1 117 GLN 117 117 GLN GLN A . A 1 118 GLY 118 118 GLY GLY A . A 1 119 VAL 119 119 VAL VAL A . A 1 120 SER 120 120 SER SER A . A 1 121 LYS 121 121 LYS LYS A . A 1 122 PHE 122 122 PHE PHE A . A 1 123 PRO 123 123 PRO PRO A . A 1 124 ALA 124 124 ALA ALA A . A 1 125 ARG 125 125 ARG ARG A . A 1 126 ILE 126 126 ILE ILE A . A 1 127 LYS 127 127 LYS LYS A . A 1 128 CYS 128 128 CYS CYS A . A 1 129 ALA 129 129 ALA ALA A . A 1 130 THR 130 130 THR THR A . A 1 131 LEU 131 131 LEU LEU A . A 1 132 SER 132 132 SER SER A . A 1 133 TRP 133 133 TRP TRP A . A 1 134 LYS 134 134 LYS LYS A . A 1 135 ALA 135 135 ALA ALA A . A 1 136 LEU 136 136 LEU LEU A . A 1 137 GLU 137 137 GLU GLU A . A 1 138 LYS 138 138 LYS LYS A . A 1 139 GLY 139 139 GLY GLY A . A 1 140 VAL 140 140 VAL VAL A . A 1 141 ALA 141 141 ALA ALA A . A 1 142 LYS 142 142 LYS LYS A . A 1 143 GLU 143 143 GLU GLU A . A 1 144 GLU 144 144 GLU GLU A . A 1 145 GLY 145 145 GLY GLY A . A 1 146 GLY 146 146 GLY GLY A . A 1 147 ASN 147 147 ASN ASN A . B 2 1 MET 1 1 MET MET B . B 2 2 ASN 2 2 ASN ASN B . B 2 3 ILE 3 3 ILE ILE B . B 2 4 THR 4 4 THR THR B . B 2 5 ASP 5 5 ASP ASP B . B 2 6 ILE 6 6 ILE ILE B . B 2 7 ARG 7 7 ARG ARG B . B 2 8 GLU 8 8 GLU GLU B . B 2 9 GLN 9 9 GLN GLN B . B 2 10 PHE 10 10 PHE PHE B . B 2 11 PRO 11 11 PRO PRO B . B 2 12 ILE 12 12 ILE ILE B . B 2 13 LEU 13 13 LEU LEU B . B 2 14 HIS 14 14 HIS HIS B . B 2 15 GLN 15 15 GLN GLN B . B 2 16 GLN 16 16 GLN GLN B . B 2 17 VAL 17 17 VAL VAL B . B 2 18 ASN 18 18 ASN ASN B . B 2 19 GLY 19 19 GLY GLY B . B 2 20 HIS 20 20 HIS HIS B . B 2 21 ASP 21 21 ASP ASP B . B 2 22 LEU 22 22 LEU LEU B . B 2 23 VAL 23 23 VAL VAL B . B 2 24 TYR 24 24 TYR TYR B . B 2 25 LEU 25 25 LEU LEU B . B 2 26 ASP 26 26 ASP ASP B . B 2 27 SER 27 27 SER SER B . B 2 28 ALA 28 28 ALA ALA B . B 2 29 ALA 29 29 ALA ALA B . B 2 30 THR 30 30 THR THR B . B 2 31 SER 31 31 SER SER B . B 2 32 GLN 32 32 GLN GLN B . B 2 33 LYS 33 33 LYS LYS B . B 2 34 PRO 34 34 PRO PRO B . B 2 35 ARG 35 35 ARG ARG B . B 2 36 ALA 36 36 ALA ALA B . B 2 37 VAL 37 37 VAL VAL B . B 2 38 ILE 38 38 ILE ILE B . B 2 39 GLU 39 39 GLU GLU B . B 2 40 THR 40 40 THR THR B . B 2 41 LEU 41 41 LEU LEU B . B 2 42 ASP 42 42 ASP ASP B . B 2 43 LYS 43 43 LYS LYS B . B 2 44 TYR 44 44 TYR TYR B . B 2 45 TYR 45 45 TYR TYR B . B 2 46 ASN 46 46 ASN ASN B . B 2 47 GLN 47 47 GLN GLN B . B 2 48 TYR 48 48 TYR TYR B . B 2 49 ASN 49 49 ASN ASN B . B 2 50 SER 50 50 SER SER B . B 2 51 ASN 51 51 ASN ASN B . B 2 52 VAL 52 52 VAL VAL B . B 2 53 HIS 53 53 HIS HIS B . B 2 54 ARG 54 54 ARG ARG B . B 2 55 GLY 55 55 GLY GLY B . B 2 56 VAL 56 56 VAL VAL B . B 2 57 HIS 57 57 HIS HIS B . B 2 58 THR 58 58 THR THR B . B 2 59 LEU 59 59 LEU LEU B . B 2 60 GLY 60 60 GLY GLY B . B 2 61 THR 61 61 THR THR B . B 2 62 ARG 62 62 ARG ARG B . B 2 63 ALA 63 63 ALA ALA B . B 2 64 THR 64 64 THR THR B . B 2 65 ASP 65 65 ASP ASP B . B 2 66 GLY 66 66 GLY GLY B . B 2 67 TYR 67 67 TYR TYR B . B 2 68 GLU 68 68 GLU GLU B . B 2 69 GLY 69 69 GLY GLY B . B 2 70 ALA 70 70 ALA ALA B . B 2 71 ARG 71 71 ARG ARG B . B 2 72 GLU 72 72 GLU GLU B . B 2 73 LYS 73 73 LYS LYS B . B 2 74 VAL 74 74 VAL VAL B . B 2 75 ARG 75 75 ARG ARG B . B 2 76 LYS 76 76 LYS LYS B . B 2 77 PHE 77 77 PHE PHE B . B 2 78 ILE 78 78 ILE ILE B . B 2 79 ASN 79 79 ASN ASN B . B 2 80 ALA 80 80 ALA ALA B . B 2 81 LYS 81 81 LYS LYS B . B 2 82 SER 82 82 SER SER B . B 2 83 MET 83 83 MET MET B . B 2 84 ALA 84 84 ALA ALA B . B 2 85 GLU 85 85 GLU GLU B . B 2 86 ILE 86 86 ILE ILE B . B 2 87 ILE 87 87 ILE ILE B . B 2 88 PHE 88 88 PHE PHE B . B 2 89 THR 89 89 THR THR B . B 2 90 LYS 90 90 LYS LYS B . B 2 91 GLY 91 91 GLY GLY B . B 2 92 THR 92 92 THR THR B . B 2 93 THR 93 93 THR THR B . B 2 94 THR 94 94 THR THR B . B 2 95 SER 95 95 SER SER B . B 2 96 LEU 96 96 LEU LEU B . B 2 97 ASN 97 97 ASN ASN B . B 2 98 MET 98 98 MET MET B . B 2 99 VAL 99 99 VAL VAL B . B 2 100 ALA 100 100 ALA ALA B . B 2 101 LEU 101 101 LEU LEU B . B 2 102 SER 102 102 SER SER B . B 2 103 TYR 103 103 TYR TYR B . B 2 104 ALA 104 104 ALA ALA B . B 2 105 ARG 105 105 ARG ARG B . B 2 106 ALA 106 106 ALA ALA B . B 2 107 ASN 107 107 ASN ASN B . B 2 108 LEU 108 108 LEU LEU B . B 2 109 LYS 109 109 LYS LYS B . B 2 110 PRO 110 110 PRO PRO B . B 2 111 GLY 111 111 GLY GLY B . B 2 112 ASP 112 112 ASP ASP B . B 2 113 GLU 113 113 GLU GLU B . B 2 114 VAL 114 114 VAL VAL B . B 2 115 VAL 115 115 VAL VAL B . B 2 116 ILE 116 116 ILE ILE B . B 2 117 THR 117 117 THR THR B . B 2 118 TYR 118 118 TYR TYR B . B 2 119 MET 119 119 MET MET B . B 2 120 GLU 120 120 GLU GLU B . B 2 121 HIS 121 121 HIS HIS B . B 2 122 HIS 122 122 HIS HIS B . B 2 123 ALA 123 123 ALA ALA B . B 2 124 ASN 124 124 ASN ASN B . B 2 125 ILE 125 125 ILE ILE B . B 2 126 ILE 126 126 ILE ILE B . B 2 127 PRO 127 127 PRO PRO B . B 2 128 TRP 128 128 TRP TRP B . B 2 129 GLN 129 129 GLN GLN B . B 2 130 GLN 130 130 GLN GLN B . B 2 131 ALA 131 131 ALA ALA B . B 2 132 VAL 132 132 VAL VAL B . B 2 133 LYS 133 133 LYS LYS B . B 2 134 ALA 134 134 ALA ALA B . B 2 135 THR 135 135 THR THR B . B 2 136 GLY 136 136 GLY GLY B . B 2 137 ALA 137 137 ALA ALA B . B 2 138 THR 138 138 THR THR B . B 2 139 LEU 139 139 LEU LEU B . B 2 140 LYS 140 140 LYS LYS B . B 2 141 TYR 141 141 TYR TYR B . B 2 142 ILE 142 142 ILE ILE B . B 2 143 PRO 143 143 PRO PRO B . B 2 144 LEU 144 144 LEU LEU B . B 2 145 GLN 145 145 GLN GLN B . B 2 146 GLU 146 146 GLU GLU B . B 2 147 ASP 147 147 ASP ASP B . B 2 148 GLY 148 148 GLY GLY B . B 2 149 THR 149 149 THR THR B . B 2 150 ILE 150 150 ILE ILE B . B 2 151 SER 151 151 SER SER B . B 2 152 LEU 152 152 LEU LEU B . B 2 153 GLU 153 153 GLU GLU B . B 2 154 ASP 154 154 ASP ASP B . B 2 155 VAL 155 155 VAL VAL B . B 2 156 ARG 156 156 ARG ARG B . B 2 157 GLU 157 157 GLU GLU B . B 2 158 THR 158 158 THR THR B . B 2 159 VAL 159 159 VAL VAL B . B 2 160 THR 160 160 THR THR B . B 2 161 SER 161 161 SER SER B . B 2 162 ASN 162 162 ASN ASN B . B 2 163 THR 163 163 THR THR B . B 2 164 LYS 164 164 LYS LYS B . B 2 165 ILE 165 165 ILE ILE B . B 2 166 VAL 166 166 VAL VAL B . B 2 167 ALA 167 167 ALA ALA B . B 2 168 VAL 168 168 VAL VAL B . B 2 169 SER 169 169 SER SER B . B 2 170 HIS 170 170 HIS HIS B . B 2 171 VAL 171 171 VAL VAL B . B 2 172 SER 172 172 SER SER B . B 2 173 ASN 173 173 ASN ASN B . B 2 174 VAL 174 174 VAL VAL B . B 2 175 LEU 175 175 LEU LEU B . B 2 176 GLY 176 176 GLY GLY B . B 2 177 THR 177 177 THR THR B . B 2 178 VAL 178 178 VAL VAL B . B 2 179 ASN 179 179 ASN ASN B . B 2 180 PRO 180 180 PRO PRO B . B 2 181 ILE 181 181 ILE ILE B . B 2 182 LYS 182 182 LYS LYS B . B 2 183 GLU 183 183 GLU GLU B . B 2 184 MET 184 184 MET MET B . B 2 185 ALA 185 185 ALA ALA B . B 2 186 LYS 186 186 LYS LYS B . B 2 187 ILE 187 187 ILE ILE B . B 2 188 ALA 188 188 ALA ALA B . B 2 189 HIS 189 189 HIS HIS B . B 2 190 ASP 190 190 ASP ASP B . B 2 191 ASN 191 191 ASN ASN B . B 2 192 GLY 192 192 GLY GLY B . B 2 193 ALA 193 193 ALA ALA B . B 2 194 VAL 194 194 VAL VAL B . B 2 195 ILE 195 195 ILE ILE B . B 2 196 VAL 196 196 VAL VAL B . B 2 197 VAL 197 197 VAL VAL B . B 2 198 ASP 198 198 ASP ASP B . B 2 199 GLY 199 199 GLY GLY B . B 2 200 ALA 200 200 ALA ALA B . B 2 201 GLN 201 201 GLN GLN B . B 2 202 SER 202 202 SER SER B . B 2 203 THR 203 203 THR THR B . B 2 204 PRO 204 204 PRO PRO B . B 2 205 HIS 205 205 HIS HIS B . B 2 206 MET 206 206 MET MET B . B 2 207 LYS 207 207 LYS LYS B . B 2 208 ILE 208 208 ILE ILE B . B 2 209 ASP 209 209 ASP ASP B . B 2 210 VAL 210 210 VAL VAL B . B 2 211 GLN 211 211 GLN GLN B . B 2 212 ASP 212 212 ASP ASP B . B 2 213 LEU 213 213 LEU LEU B . B 2 214 ASP 214 214 ASP ASP B . B 2 215 CYS 215 215 CYS CYS B . B 2 216 ASP 216 216 ASP ASP B . B 2 217 PHE 217 217 PHE PHE B . B 2 218 PHE 218 218 PHE PHE B . B 2 219 ALA 219 219 ALA ALA B . B 2 220 LEU 220 220 LEU LEU B . B 2 221 SER 221 221 SER SER B . B 2 222 SER 222 222 SER SER B . B 2 223 HIS 223 223 HIS HIS B . B 2 224 LYS 224 224 LYS LYS B . B 2 225 MET 225 225 MET MET B . B 2 226 CYS 226 226 CYS CYS B . B 2 227 GLY 227 227 GLY GLY B . B 2 228 PRO 228 228 PRO PRO B . B 2 229 THR 229 229 THR THR B . B 2 230 GLY 230 230 GLY GLY B . B 2 231 VAL 231 231 VAL VAL B . B 2 232 GLY 232 232 GLY GLY B . B 2 233 VAL 233 233 VAL VAL B . B 2 234 LEU 234 234 LEU LEU B . B 2 235 TYR 235 235 TYR TYR B . B 2 236 GLY 236 236 GLY GLY B . B 2 237 LYS 237 237 LYS LYS B . B 2 238 LYS 238 238 LYS LYS B . B 2 239 ALA 239 239 ALA ALA B . B 2 240 LEU 240 240 LEU LEU B . B 2 241 LEU 241 241 LEU LEU B . B 2 242 GLU 242 242 GLU GLU B . B 2 243 ASN 243 243 ASN ASN B . B 2 244 MET 244 244 MET MET B . B 2 245 GLU 245 245 GLU GLU B . B 2 246 PRO 246 246 PRO PRO B . B 2 247 ALA 247 247 ALA ALA B . B 2 248 GLU 248 248 GLU GLU B . B 2 249 PHE 249 249 PHE PHE B . B 2 250 GLY 250 250 GLY GLY B . B 2 251 GLY 251 251 GLY GLY B . B 2 252 GLU 252 252 GLU GLU B . B 2 253 MET 253 253 MET MET B . B 2 254 ILE 254 254 ILE ILE B . B 2 255 ASP 255 255 ASP ASP B . B 2 256 PHE 256 256 PHE PHE B . B 2 257 VAL 257 257 VAL VAL B . B 2 258 GLY 258 258 GLY GLY B . B 2 259 LEU 259 259 LEU LEU B . B 2 260 TYR 260 260 TYR TYR B . B 2 261 GLU 261 261 GLU GLU B . B 2 262 SER 262 262 SER SER B . B 2 263 THR 263 263 THR THR B . B 2 264 TRP 264 264 TRP TRP B . B 2 265 LYS 265 265 LYS LYS B . B 2 266 GLU 266 266 GLU GLU B . B 2 267 LEU 267 267 LEU LEU B . B 2 268 PRO 268 268 PRO PRO B . B 2 269 TRP 269 269 TRP TRP B . B 2 270 LYS 270 270 LYS LYS B . B 2 271 PHE 271 271 PHE PHE B . B 2 272 GLU 272 272 GLU GLU B . B 2 273 ALA 273 273 ALA ALA B . B 2 274 GLY 274 274 GLY GLY B . B 2 275 THR 275 275 THR THR B . B 2 276 PRO 276 276 PRO PRO B . B 2 277 ILE 277 277 ILE ILE B . B 2 278 ILE 278 278 ILE ILE B . B 2 279 ALA 279 279 ALA ALA B . B 2 280 GLY 280 280 GLY GLY B . B 2 281 ALA 281 281 ALA ALA B . B 2 282 ILE 282 282 ILE ILE B . B 2 283 GLY 283 283 GLY GLY B . B 2 284 LEU 284 284 LEU LEU B . B 2 285 GLY 285 285 GLY GLY B . B 2 286 ALA 286 286 ALA ALA B . B 2 287 ALA 287 287 ALA ALA B . B 2 288 ILE 288 288 ILE ILE B . B 2 289 ASP 289 289 ASP ASP B . B 2 290 PHE 290 290 PHE PHE B . B 2 291 LEU 291 291 LEU LEU B . B 2 292 GLU 292 292 GLU GLU B . B 2 293 GLU 293 293 GLU GLU B . B 2 294 ILE 294 294 ILE ILE B . B 2 295 GLY 295 295 GLY GLY B . B 2 296 LEU 296 296 LEU LEU B . B 2 297 ASP 297 297 ASP ASP B . B 2 298 GLU 298 298 GLU GLU B . B 2 299 ILE 299 299 ILE ILE B . B 2 300 SER 300 300 SER SER B . B 2 301 ARG 301 301 ARG ARG B . B 2 302 HIS 302 302 HIS HIS B . B 2 303 GLU 303 303 GLU GLU B . B 2 304 HIS 304 304 HIS HIS B . B 2 305 LYS 305 305 LYS LYS B . B 2 306 LEU 306 306 LEU LEU B . B 2 307 ALA 307 307 ALA ALA B . B 2 308 ALA 308 308 ALA ALA B . B 2 309 TYR 309 309 TYR TYR B . B 2 310 ALA 310 310 ALA ALA B . B 2 311 LEU 311 311 LEU LEU B . B 2 312 GLU 312 312 GLU GLU B . B 2 313 ARG 313 313 ARG ARG B . B 2 314 PHE 314 314 PHE PHE B . B 2 315 ARG 315 315 ARG ARG B . B 2 316 GLN 316 316 GLN GLN B . B 2 317 LEU 317 317 LEU LEU B . B 2 318 ASP 318 318 ASP ASP B . B 2 319 GLY 319 319 GLY GLY B . B 2 320 VAL 320 320 VAL VAL B . B 2 321 THR 321 321 THR THR B . B 2 322 VAL 322 322 VAL VAL B . B 2 323 TYR 323 323 TYR TYR B . B 2 324 GLY 324 324 GLY GLY B . B 2 325 PRO 325 325 PRO PRO B . B 2 326 GLU 326 326 GLU GLU B . B 2 327 GLU 327 327 GLU GLU B . B 2 328 ARG 328 328 ARG ARG B . B 2 329 ALA 329 329 ALA ALA B . B 2 330 GLY 330 330 GLY GLY B . B 2 331 LEU 331 331 LEU LEU B . B 2 332 VAL 332 332 VAL VAL B . B 2 333 THR 333 333 THR THR B . B 2 334 PHE 334 334 PHE PHE B . B 2 335 ASN 335 335 ASN ASN B . B 2 336 LEU 336 336 LEU LEU B . B 2 337 ASP 337 337 ASP ASP B . B 2 338 ASP 338 338 ASP ASP B . B 2 339 VAL 339 339 VAL VAL B . B 2 340 HIS 340 340 HIS HIS B . B 2 341 PRO 341 341 PRO PRO B . B 2 342 HIS 342 342 HIS HIS B . B 2 343 ASP 343 343 ASP ASP B . B 2 344 VAL 344 344 VAL VAL B . B 2 345 ALA 345 345 ALA ALA B . B 2 346 THR 346 346 THR THR B . B 2 347 VAL 347 347 VAL VAL B . B 2 348 LEU 348 348 LEU LEU B . B 2 349 ASP 349 349 ASP ASP B . B 2 350 ALA 350 350 ALA ALA B . B 2 351 GLU 351 351 GLU GLU B . B 2 352 GLY 352 352 GLY GLY B . B 2 353 ILE 353 353 ILE ILE B . B 2 354 ALA 354 354 ALA ALA B . B 2 355 VAL 355 355 VAL VAL B . B 2 356 ARG 356 356 ARG ARG B . B 2 357 ALA 357 357 ALA ALA B . B 2 358 GLY 358 358 GLY GLY B . B 2 359 HIS 359 359 HIS HIS B . B 2 360 HIS 360 360 HIS HIS B . B 2 361 CYS 361 361 CYS CYS B . B 2 362 ALA 362 362 ALA ALA B . B 2 363 GLN 363 363 GLN GLN B . B 2 364 PRO 364 364 PRO PRO B . B 2 365 LEU 365 365 LEU LEU B . B 2 366 MET 366 366 MET MET B . B 2 367 LYS 367 367 LYS LYS B . B 2 368 TRP 368 368 TRP TRP B . B 2 369 LEU 369 369 LEU LEU B . B 2 370 ASP 370 370 ASP ASP B . B 2 371 VAL 371 371 VAL VAL B . B 2 372 THR 372 372 THR THR B . B 2 373 ALA 373 373 ALA ALA B . B 2 374 THR 374 374 THR THR B . B 2 375 ALA 375 375 ALA ALA B . B 2 376 ARG 376 376 ARG ARG B . B 2 377 ALA 377 377 ALA ALA B . B 2 378 SER 378 378 SER SER B . B 2 379 PHE 379 379 PHE PHE B . B 2 380 TYR 380 380 TYR TYR B . B 2 381 LEU 381 381 LEU LEU B . B 2 382 TYR 382 382 TYR TYR B . B 2 383 ASN 383 383 ASN ASN B . B 2 384 THR 384 384 THR THR B . B 2 385 GLU 385 385 GLU GLU B . B 2 386 GLU 386 386 GLU GLU B . B 2 387 GLU 387 387 GLU GLU B . B 2 388 ILE 388 388 ILE ILE B . B 2 389 ASP 389 389 ASP ASP B . B 2 390 LYS 390 390 LYS LYS B . B 2 391 LEU 391 391 LEU LEU B . B 2 392 VAL 392 392 VAL VAL B . B 2 393 GLU 393 393 GLU GLU B . B 2 394 ALA 394 394 ALA ALA B . B 2 395 LEU 395 395 LEU LEU B . B 2 396 GLN 396 396 GLN GLN B . B 2 397 LYS 397 397 LYS LYS B . B 2 398 THR 398 398 THR THR B . B 2 399 LYS 399 399 LYS LYS B . B 2 400 GLU 400 400 GLU GLU B . B 2 401 TYR 401 401 TYR TYR B . B 2 402 PHE 402 402 PHE PHE B . B 2 403 THR 403 403 THR THR B . B 2 404 ASN 404 404 ASN ASN B . B 2 405 VAL 405 405 VAL VAL B . B 2 406 PHE 406 406 PHE PHE B . # # loop_ # #