data_9A6V # _entry.id 9A6V # loop_ _atom_type.symbol C H N O S # loop_ _audit_author.name _audit_author.pdbx_ordinal "Stahl, K." 1 "Brock, O." 2 "Rappsilber, J." 3 # loop_ _audit_conform.dict_location _audit_conform.dict_name _audit_conform.dict_version https://mmcif.wwpdb.org/dictionaries/ascii/mmcif_ihm_ext.dic mmcif_ihm_ext.dic 1.26 http://mmcif.wwpdb.org/dictionaries/ascii/mmcif_pdbx_v50.dic mmcif_pdbx.dic 5.395 # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 9A6V _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2024-01-23 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2024-09-18 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 9A6V pdb_00009a6v 10.2210/pdb9a6v/pdb PDB-Dev PDBDEV_00000324 PDBDEV_00000324 ? # _ihm_entry_collection.id PDBDEV_G_1000003 _ihm_entry_collection.name . _ihm_entry_collection.details 'Collection of entries belonging to the publication: "Modelling protein complexes with crosslinking mass spectrometry and deep learning"' # _ihm_entry_collection_mapping.collection_id PDBDEV_G_1000003 _ihm_entry_collection_mapping.entry_id 9A6V # loop_ _chem_comp.formula _chem_comp.formula_weight _chem_comp.id _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.type "C3 H7 N O2" 89.094 ALA . ALANINE . "L-peptide linking" "C6 H15 N4 O2 1" 175.212 ARG . ARGININE . "L-peptide linking" "C4 H8 N2 O3" 132.119 ASN . ASPARAGINE . "L-peptide linking" "C4 H7 N O4" 133.103 ASP . "ASPARTIC ACID" . "L-peptide linking" "C3 H7 N O2 S" 121.154 CYS . CYSTEINE . "L-peptide linking" "C5 H10 N2 O3" 146.146 GLN . GLUTAMINE . "L-peptide linking" "C5 H9 N O4" 147.13 GLU . "GLUTAMIC ACID" . "L-peptide linking" "C2 H5 N O2" 75.067 GLY . GLYCINE . "peptide linking" "C6 H10 N3 O2 1" 156.165 HIS . HISTIDINE . "L-peptide linking" "C6 H13 N O2" 131.175 ILE . ISOLEUCINE . "L-peptide linking" "C6 H13 N O2" 131.175 LEU . LEUCINE . "L-peptide linking" "C6 H15 N2 O2 1" 147.198 LYS . LYSINE . "L-peptide linking" "C5 H11 N O2 S" 149.208 MET . METHIONINE . "L-peptide linking" "C9 H11 N O2" 165.192 PHE . PHENYLALANINE . "L-peptide linking" "C5 H9 N O2" 115.132 PRO . PROLINE . "L-peptide linking" "C3 H7 N O3" 105.093 SER . SERINE . "L-peptide linking" "C4 H9 N O3" 119.12 THR . THREONINE . "L-peptide linking" "C11 H12 N2 O2" 204.229 TRP . TRYPTOPHAN . "L-peptide linking" "C9 H11 N O3" 181.191 TYR . TYROSINE . "L-peptide linking" "C5 H11 N O2" 117.148 VAL . VALINE . "L-peptide linking" # _citation.country . _citation.id 1 _citation.journal_abbrev "Nat. Commun." _citation.journal_id_ASTM . _citation.journal_id_CSD . _citation.journal_id_ISSN . _citation.journal_issue . _citation.journal_volume 15 _citation.page_first 7866 _citation.page_last . _citation.pdbx_database_id_DOI 10.1038/s41467-024-51771-2 _citation.pdbx_database_id_PubMed 39251624 _citation.title "Modelling protein complexes with crosslinking mass spectrometry and deep learning" _citation.year 2024 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal 1 "Stahl, K." 1 1 "Warneke, R." 2 1 "Demann, L." 3 1 "Bremenkamp, R." 4 1 "Hormes, B." 5 1 "Brock, O." 6 1 "Stulke, J." 7 1 "Rappsilber, J." 8 # loop_ _entity.details _entity.formula_weight _entity.id _entity.pdbx_description _entity.pdbx_number_of_molecules _entity.src_method _entity.type . 36928.33 1 PDXS_BACSU 1 MAN POLYMER . 11416.815 2 YPBS_BACSU 1 MAN POLYMER # loop_ _entity_poly.entity_id _entity_poly.nstd_chirality _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_sequence_evidence_code _entity_poly.pdbx_strand_id _entity_poly.type 1 . NO NO MAQTGTERVKRGMAEMQKGGVIMDVINAEQAKIAEEAGAVAVMALERVPADIRAAGGVARMADPTIVEEVMNAVSIPVMAKARIGHIVEARVLEAMGVDYIDESEVLTPADEEFHLNKNEYTVPFVCGCRDLGEATRRIAEGASMLRTKGEPGTGNIVEAVRHMRKVNAQVRKVVAMSEDELMTEAKNLGAPYELLLQIKKDGKLPVVNFAAGGVATPADAALMMQLGADGVFVGSGIFKSDNPAKFAKAIVEATTHFTDYKLIAELSKELGTAMKGIEISNLLPEQRMQERGW MAQTGTERVKRGMAEMQKGGVIMDVINAEQAKIAEEAGAVAVMALERVPADIRAAGGVARMADPTIVEEVMNAVSIPVMAKARIGHIVEARVLEAMGVDYIDESEVLTPADEEFHLNKNEYTVPFVCGCRDLGEATRRIAEGASMLRTKGEPGTGNIVEAVRHMRKVNAQVRKVVAMSEDELMTEAKNLGAPYELLLQIKKDGKLPVVNFAAGGVATPADAALMMQLGADGVFVGSGIFKSDNPAKFAKAIVEATTHFTDYKLIAELSKELGTAMKGIEISNLLPEQRMQERGW . A polypeptide(L) 2 . NO NO MSEVHKAISAHSSKQHEHIKAFMRLENMRELAIEEAVAKCRNDEPYTTDAINEITEQMNQLAKKGIVPTRRLVSKEMVREYVSRM MSEVHKAISAHSSKQHEHIKAFMRLENMRELAIEEAVAKCRNDEPYTTDAINEITEQMNQLAKKGIVPTRRLVSKEMVREYVSRM . B polypeptide(L) # loop_ _entity_poly_seq.entity_id _entity_poly_seq.hetero _entity_poly_seq.mon_id _entity_poly_seq.num 1 . MET 1 1 . ALA 2 1 . GLN 3 1 . THR 4 1 . GLY 5 1 . THR 6 1 . GLU 7 1 . ARG 8 1 . VAL 9 1 . LYS 10 1 . ARG 11 1 . GLY 12 1 . MET 13 1 . ALA 14 1 . GLU 15 1 . MET 16 1 . GLN 17 1 . LYS 18 1 . GLY 19 1 . GLY 20 1 . VAL 21 1 . ILE 22 1 . MET 23 1 . ASP 24 1 . VAL 25 1 . ILE 26 1 . ASN 27 1 . ALA 28 1 . GLU 29 1 . GLN 30 1 . ALA 31 1 . LYS 32 1 . ILE 33 1 . ALA 34 1 . GLU 35 1 . GLU 36 1 . ALA 37 1 . GLY 38 1 . ALA 39 1 . VAL 40 1 . ALA 41 1 . VAL 42 1 . MET 43 1 . ALA 44 1 . LEU 45 1 . GLU 46 1 . ARG 47 1 . VAL 48 1 . PRO 49 1 . ALA 50 1 . ASP 51 1 . ILE 52 1 . ARG 53 1 . ALA 54 1 . ALA 55 1 . GLY 56 1 . GLY 57 1 . VAL 58 1 . ALA 59 1 . ARG 60 1 . MET 61 1 . ALA 62 1 . ASP 63 1 . PRO 64 1 . THR 65 1 . ILE 66 1 . VAL 67 1 . GLU 68 1 . GLU 69 1 . VAL 70 1 . MET 71 1 . ASN 72 1 . ALA 73 1 . VAL 74 1 . SER 75 1 . ILE 76 1 . PRO 77 1 . VAL 78 1 . MET 79 1 . ALA 80 1 . LYS 81 1 . ALA 82 1 . ARG 83 1 . ILE 84 1 . GLY 85 1 . HIS 86 1 . ILE 87 1 . VAL 88 1 . GLU 89 1 . ALA 90 1 . ARG 91 1 . VAL 92 1 . LEU 93 1 . GLU 94 1 . ALA 95 1 . MET 96 1 . GLY 97 1 . VAL 98 1 . ASP 99 1 . TYR 100 1 . ILE 101 1 . ASP 102 1 . GLU 103 1 . SER 104 1 . GLU 105 1 . VAL 106 1 . LEU 107 1 . THR 108 1 . PRO 109 1 . ALA 110 1 . ASP 111 1 . GLU 112 1 . GLU 113 1 . PHE 114 1 . HIS 115 1 . LEU 116 1 . ASN 117 1 . LYS 118 1 . ASN 119 1 . GLU 120 1 . TYR 121 1 . THR 122 1 . VAL 123 1 . PRO 124 1 . PHE 125 1 . VAL 126 1 . CYS 127 1 . GLY 128 1 . CYS 129 1 . ARG 130 1 . ASP 131 1 . LEU 132 1 . GLY 133 1 . GLU 134 1 . ALA 135 1 . THR 136 1 . ARG 137 1 . ARG 138 1 . ILE 139 1 . ALA 140 1 . GLU 141 1 . GLY 142 1 . ALA 143 1 . SER 144 1 . MET 145 1 . LEU 146 1 . ARG 147 1 . THR 148 1 . LYS 149 1 . GLY 150 1 . GLU 151 1 . PRO 152 1 . GLY 153 1 . THR 154 1 . GLY 155 1 . ASN 156 1 . ILE 157 1 . VAL 158 1 . GLU 159 1 . ALA 160 1 . VAL 161 1 . ARG 162 1 . HIS 163 1 . MET 164 1 . ARG 165 1 . LYS 166 1 . VAL 167 1 . ASN 168 1 . ALA 169 1 . GLN 170 1 . VAL 171 1 . ARG 172 1 . LYS 173 1 . VAL 174 1 . VAL 175 1 . ALA 176 1 . MET 177 1 . SER 178 1 . GLU 179 1 . ASP 180 1 . GLU 181 1 . LEU 182 1 . MET 183 1 . THR 184 1 . GLU 185 1 . ALA 186 1 . LYS 187 1 . ASN 188 1 . LEU 189 1 . GLY 190 1 . ALA 191 1 . PRO 192 1 . TYR 193 1 . GLU 194 1 . LEU 195 1 . LEU 196 1 . LEU 197 1 . GLN 198 1 . ILE 199 1 . LYS 200 1 . LYS 201 1 . ASP 202 1 . GLY 203 1 . LYS 204 1 . LEU 205 1 . PRO 206 1 . VAL 207 1 . VAL 208 1 . ASN 209 1 . PHE 210 1 . ALA 211 1 . ALA 212 1 . GLY 213 1 . GLY 214 1 . VAL 215 1 . ALA 216 1 . THR 217 1 . PRO 218 1 . ALA 219 1 . ASP 220 1 . ALA 221 1 . ALA 222 1 . LEU 223 1 . MET 224 1 . MET 225 1 . GLN 226 1 . LEU 227 1 . GLY 228 1 . ALA 229 1 . ASP 230 1 . GLY 231 1 . VAL 232 1 . PHE 233 1 . VAL 234 1 . GLY 235 1 . SER 236 1 . GLY 237 1 . ILE 238 1 . PHE 239 1 . LYS 240 1 . SER 241 1 . ASP 242 1 . ASN 243 1 . PRO 244 1 . ALA 245 1 . LYS 246 1 . PHE 247 1 . ALA 248 1 . LYS 249 1 . ALA 250 1 . ILE 251 1 . VAL 252 1 . GLU 253 1 . ALA 254 1 . THR 255 1 . THR 256 1 . HIS 257 1 . PHE 258 1 . THR 259 1 . ASP 260 1 . TYR 261 1 . LYS 262 1 . LEU 263 1 . ILE 264 1 . ALA 265 1 . GLU 266 1 . LEU 267 1 . SER 268 1 . LYS 269 1 . GLU 270 1 . LEU 271 1 . GLY 272 1 . THR 273 1 . ALA 274 1 . MET 275 1 . LYS 276 1 . GLY 277 1 . ILE 278 1 . GLU 279 1 . ILE 280 1 . SER 281 1 . ASN 282 1 . LEU 283 1 . LEU 284 1 . PRO 285 1 . GLU 286 1 . GLN 287 1 . ARG 288 1 . MET 289 1 . GLN 290 1 . GLU 291 1 . ARG 292 1 . GLY 293 1 . TRP 294 2 . MET 1 2 . SER 2 2 . GLU 3 2 . VAL 4 2 . HIS 5 2 . LYS 6 2 . ALA 7 2 . ILE 8 2 . SER 9 2 . ALA 10 2 . HIS 11 2 . SER 12 2 . SER 13 2 . LYS 14 2 . GLN 15 2 . HIS 16 2 . GLU 17 2 . HIS 18 2 . ILE 19 2 . LYS 20 2 . ALA 21 2 . PHE 22 2 . MET 23 2 . ARG 24 2 . LEU 25 2 . GLU 26 2 . ASN 27 2 . MET 28 2 . ARG 29 2 . GLU 30 2 . LEU 31 2 . ALA 32 2 . ILE 33 2 . GLU 34 2 . GLU 35 2 . ALA 36 2 . VAL 37 2 . ALA 38 2 . LYS 39 2 . CYS 40 2 . ARG 41 2 . ASN 42 2 . ASP 43 2 . GLU 44 2 . PRO 45 2 . TYR 46 2 . THR 47 2 . THR 48 2 . ASP 49 2 . ALA 50 2 . ILE 51 2 . ASN 52 2 . GLU 53 2 . ILE 54 2 . THR 55 2 . GLU 56 2 . GLN 57 2 . MET 58 2 . ASN 59 2 . GLN 60 2 . LEU 61 2 . ALA 62 2 . LYS 63 2 . LYS 64 2 . GLY 65 2 . ILE 66 2 . VAL 67 2 . PRO 68 2 . THR 69 2 . ARG 70 2 . ARG 71 2 . LEU 72 2 . VAL 73 2 . SER 74 2 . LYS 75 2 . GLU 76 2 . MET 77 2 . VAL 78 2 . ARG 79 2 . GLU 80 2 . TYR 81 2 . VAL 82 2 . SER 83 2 . ARG 84 2 . MET 85 # _ihm_chemical_component_descriptor.auth_name SDA _ihm_chemical_component_descriptor.chemical_name "succinimidyl 4,4'-azipentanoate" _ihm_chemical_component_descriptor.common_name . _ihm_chemical_component_descriptor.details . _ihm_chemical_component_descriptor.id 1 _ihm_chemical_component_descriptor.inchi 1S/C9H11N3O4/c1-9(10-11-9)5-4-8(15)16-12-6(13)2-3-7(12)14/h2-5H2,1H3 _ihm_chemical_component_descriptor.inchi_key " SYYLQNPWAPHRFV-UHFFFAOYSA-N" _ihm_chemical_component_descriptor.smiles CC1(N=N1)CCC(ON2C(CCC2=O)=O)=O _ihm_chemical_component_descriptor.smiles_canonical . # loop_ _ihm_cross_link_list.comp_id_1 _ihm_cross_link_list.comp_id_2 _ihm_cross_link_list.dataset_list_id _ihm_cross_link_list.details _ihm_cross_link_list.entity_description_1 _ihm_cross_link_list.entity_description_2 _ihm_cross_link_list.entity_id_1 _ihm_cross_link_list.entity_id_2 _ihm_cross_link_list.group_id _ihm_cross_link_list.id _ihm_cross_link_list.linker_chem_comp_descriptor_id _ihm_cross_link_list.linker_type _ihm_cross_link_list.seq_id_1 _ihm_cross_link_list.seq_id_2 LYS LYS 1 . PDXS_BACSU YPBS_BACSU 1 2 1 1 1 SDA 276 63 LYS LYS 1 . PDXS_BACSU YPBS_BACSU 1 2 2 2 1 SDA 276 20 LYS LYS 1 . PDXS_BACSU YPBS_BACSU 1 2 3 3 1 SDA 276 75 LYS LYS 1 . PDXS_BACSU YPBS_BACSU 1 2 4 4 1 SDA 166 6 # loop_ _ihm_cross_link_restraint.asym_id_1 _ihm_cross_link_restraint.asym_id_2 _ihm_cross_link_restraint.atom_id_1 _ihm_cross_link_restraint.atom_id_2 _ihm_cross_link_restraint.comp_id_1 _ihm_cross_link_restraint.comp_id_2 _ihm_cross_link_restraint.conditional_crosslink_flag _ihm_cross_link_restraint.distance_threshold _ihm_cross_link_restraint.entity_id_1 _ihm_cross_link_restraint.entity_id_2 _ihm_cross_link_restraint.group_id _ihm_cross_link_restraint.id _ihm_cross_link_restraint.model_granularity _ihm_cross_link_restraint.pseudo_site_flag _ihm_cross_link_restraint.psi _ihm_cross_link_restraint.restraint_type _ihm_cross_link_restraint.seq_id_1 _ihm_cross_link_restraint.seq_id_2 _ihm_cross_link_restraint.sigma_1 _ihm_cross_link_restraint.sigma_2 A B . . LYS LYS . 25 1 2 1 1 by-residue NO 0.95 "upper bound" 276 63 . . A B . . LYS LYS . 25 1 2 2 2 by-residue NO 0.95 "upper bound" 276 20 . . A B . . LYS LYS . 25 1 2 3 3 by-residue NO 0.95 "upper bound" 276 75 . . A B . . LYS LYS . 25 1 2 4 4 by-residue NO 0.95 "upper bound" 166 6 . . # _ihm_dataset_group.application . _ihm_dataset_group.details . _ihm_dataset_group.id 1 _ihm_dataset_group.name . # _ihm_dataset_group_link.dataset_list_id 1 _ihm_dataset_group_link.group_id 1 # _ihm_dataset_list.data_type "Crosslinking-MS data" _ihm_dataset_list.database_hosted YES _ihm_dataset_list.details . _ihm_dataset_list.id 1 # _ihm_dataset_related_db_reference.accession_code PXD035508 _ihm_dataset_related_db_reference.dataset_list_id 1 _ihm_dataset_related_db_reference.db_name PRIDE _ihm_dataset_related_db_reference.details . _ihm_dataset_related_db_reference.id 1 _ihm_dataset_related_db_reference.version . # loop_ _ihm_entity_poly_segment.comp_id_begin _ihm_entity_poly_segment.comp_id_end _ihm_entity_poly_segment.entity_id _ihm_entity_poly_segment.id _ihm_entity_poly_segment.seq_id_begin _ihm_entity_poly_segment.seq_id_end MET TRP 1 1 1 294 MET MET 2 2 1 85 # _ihm_model_group.details . _ihm_model_group.id 1 _ihm_model_group.name . # _ihm_model_group_link.group_id 1 _ihm_model_group_link.model_id 1 # _ihm_model_list.assembly_id 1 _ihm_model_list.model_id 1 _ihm_model_list.model_name . _ihm_model_list.protocol_id 1 _ihm_model_list.representation_id 1 # _ihm_model_representation.details . _ihm_model_representation.id 1 _ihm_model_representation.name . # loop_ _ihm_model_representation_details.description _ihm_model_representation_details.entity_asym_id _ihm_model_representation_details.entity_description _ihm_model_representation_details.entity_id _ihm_model_representation_details.entity_poly_segment_id _ihm_model_representation_details.id _ihm_model_representation_details.model_granularity _ihm_model_representation_details.model_mode _ihm_model_representation_details.model_object_count _ihm_model_representation_details.model_object_primitive _ihm_model_representation_details.representation_id _ihm_model_representation_details.starting_model_id . A PDXS_BACSU 1 1 1 by-atom flexible . atomistic 1 . . B YPBS_BACSU 2 2 2 by-atom flexible . atomistic 1 . # _ihm_modeling_protocol.details . _ihm_modeling_protocol.id 1 _ihm_modeling_protocol.num_steps 1 _ihm_modeling_protocol.protocol_name AlphaLink2 # _ihm_modeling_protocol_details.dataset_group_id 1 _ihm_modeling_protocol_details.description . _ihm_modeling_protocol_details.ensemble_flag NO _ihm_modeling_protocol_details.id 1 _ihm_modeling_protocol_details.multi_scale_flag NO _ihm_modeling_protocol_details.multi_state_flag NO _ihm_modeling_protocol_details.num_models_begin 0 _ihm_modeling_protocol_details.num_models_end 1 _ihm_modeling_protocol_details.ordered_flag NO _ihm_modeling_protocol_details.protocol_id 1 _ihm_modeling_protocol_details.script_file_id . _ihm_modeling_protocol_details.software_id 1 _ihm_modeling_protocol_details.step_id 1 _ihm_modeling_protocol_details.step_method AlphaLink2 _ihm_modeling_protocol_details.step_name AlphaLink2 _ihm_modeling_protocol_details.struct_assembly_description . _ihm_modeling_protocol_details.struct_assembly_id 1 # _ihm_struct_assembly.description "Integrative model of PDXS-YPBS by crosslinking MS and deep learning" _ihm_struct_assembly.id 1 _ihm_struct_assembly.name PDXS-YPBS # loop_ _ihm_struct_assembly_details.assembly_id _ihm_struct_assembly_details.asym_id _ihm_struct_assembly_details.entity_description _ihm_struct_assembly_details.entity_id _ihm_struct_assembly_details.entity_poly_segment_id _ihm_struct_assembly_details.id _ihm_struct_assembly_details.parent_assembly_id 1 A PDXS_BACSU 1 1 1 1 1 B YPBS_BACSU 2 2 2 1 # _software.citation_id 1 _software.classification "model building" _software.description "Modelling protein complexes with crosslinking mass spectrometry and deep learning" _software.location https://github.com/Rappsilber-Laboratory/AlphaLink2 _software.name AlphaLink2 _software.pdbx_ordinal 1 _software.type program _software.version 1.0 # _struct.entry_id 9A6V _struct.pdbx_CASP_flag . _struct.pdbx_descriptor . _struct.pdbx_details . _struct.pdbx_model_details . _struct.pdbx_model_type_details . _struct.pdbx_structure_determination_methodology integrative _struct.title "Integrative model of PDXS-YPBS by crosslinking MS and deep learning" # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_PDB_id _struct_asym.pdbx_alt_id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.pdbx_order _struct_asym.pdbx_type PDXS_BACSU 1 A . . . . . . YPBS_BACSU 2 B . . . . . . # loop_ _struct_ref.db_code _struct_ref.db_name _struct_ref.details _struct_ref.entity_id _struct_ref.id _struct_ref.pdbx_align_begin _struct_ref.pdbx_align_end _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.pdbx_seq_one_letter_code A UNP . 1 1 1 . P37527 . MAQTGTERVKRGMAEMQKGGVIMDVINAEQAKIAEEAGAVAVMALERVPADIRAAGGVARMADPTIVEEVMNAVSIPVMAKARIGHIVEARVLEAMGVDYIDESEVLTPADEEFHLNKNEYTVPFVCGCRDLGEATRRIAEGASMLRTKGEPGTGNIVEAVRHMRKVNAQVRKVVAMSEDELMTEAKNLGAPYELLLQIKKDGKLPVVNFAAGGVATPADAALMMQLGADGVFVGSGIFKSDNPAKFAKAIVEATTHFTDYKLIAELSKELGTAMKGIEISNLLPEQRMQERGW B UNP . 2 2 1 . P54160 . MSEVHKAISAHSSKQHEHIKAFMRLENMRELAIEEAVAKCRNDEPYTTDAINEITEQMNQLAKKGIVPTRRLVSKEMVREYVSRM # loop_ _struct_ref_seq.align_id _struct_ref_seq.db_align_beg _struct_ref_seq.db_align_end _struct_ref_seq.ref_id _struct_ref_seq.seq_align_beg _struct_ref_seq.seq_align_end 1 1 294 1 1 294 2 1 85 2 1 85 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code A 1 1 MET 1 1 MET MET A . A 1 2 ALA 2 2 ALA ALA A . A 1 3 GLN 3 3 GLN GLN A . A 1 4 THR 4 4 THR THR A . A 1 5 GLY 5 5 GLY GLY A . A 1 6 THR 6 6 THR THR A . A 1 7 GLU 7 7 GLU GLU A . A 1 8 ARG 8 8 ARG ARG A . A 1 9 VAL 9 9 VAL VAL A . A 1 10 LYS 10 10 LYS LYS A . A 1 11 ARG 11 11 ARG ARG A . A 1 12 GLY 12 12 GLY GLY A . A 1 13 MET 13 13 MET MET A . A 1 14 ALA 14 14 ALA ALA A . A 1 15 GLU 15 15 GLU GLU A . A 1 16 MET 16 16 MET MET A . A 1 17 GLN 17 17 GLN GLN A . A 1 18 LYS 18 18 LYS LYS A . A 1 19 GLY 19 19 GLY GLY A . A 1 20 GLY 20 20 GLY GLY A . A 1 21 VAL 21 21 VAL VAL A . A 1 22 ILE 22 22 ILE ILE A . A 1 23 MET 23 23 MET MET A . A 1 24 ASP 24 24 ASP ASP A . A 1 25 VAL 25 25 VAL VAL A . A 1 26 ILE 26 26 ILE ILE A . A 1 27 ASN 27 27 ASN ASN A . A 1 28 ALA 28 28 ALA ALA A . A 1 29 GLU 29 29 GLU GLU A . A 1 30 GLN 30 30 GLN GLN A . A 1 31 ALA 31 31 ALA ALA A . A 1 32 LYS 32 32 LYS LYS A . A 1 33 ILE 33 33 ILE ILE A . A 1 34 ALA 34 34 ALA ALA A . A 1 35 GLU 35 35 GLU GLU A . A 1 36 GLU 36 36 GLU GLU A . A 1 37 ALA 37 37 ALA ALA A . A 1 38 GLY 38 38 GLY GLY A . A 1 39 ALA 39 39 ALA ALA A . A 1 40 VAL 40 40 VAL VAL A . A 1 41 ALA 41 41 ALA ALA A . A 1 42 VAL 42 42 VAL VAL A . A 1 43 MET 43 43 MET MET A . A 1 44 ALA 44 44 ALA ALA A . A 1 45 LEU 45 45 LEU LEU A . A 1 46 GLU 46 46 GLU GLU A . A 1 47 ARG 47 47 ARG ARG A . A 1 48 VAL 48 48 VAL VAL A . A 1 49 PRO 49 49 PRO PRO A . A 1 50 ALA 50 50 ALA ALA A . A 1 51 ASP 51 51 ASP ASP A . A 1 52 ILE 52 52 ILE ILE A . A 1 53 ARG 53 53 ARG ARG A . A 1 54 ALA 54 54 ALA ALA A . A 1 55 ALA 55 55 ALA ALA A . A 1 56 GLY 56 56 GLY GLY A . A 1 57 GLY 57 57 GLY GLY A . A 1 58 VAL 58 58 VAL VAL A . A 1 59 ALA 59 59 ALA ALA A . A 1 60 ARG 60 60 ARG ARG A . A 1 61 MET 61 61 MET MET A . A 1 62 ALA 62 62 ALA ALA A . A 1 63 ASP 63 63 ASP ASP A . A 1 64 PRO 64 64 PRO PRO A . A 1 65 THR 65 65 THR THR A . A 1 66 ILE 66 66 ILE ILE A . A 1 67 VAL 67 67 VAL VAL A . A 1 68 GLU 68 68 GLU GLU A . A 1 69 GLU 69 69 GLU GLU A . A 1 70 VAL 70 70 VAL VAL A . A 1 71 MET 71 71 MET MET A . A 1 72 ASN 72 72 ASN ASN A . A 1 73 ALA 73 73 ALA ALA A . A 1 74 VAL 74 74 VAL VAL A . A 1 75 SER 75 75 SER SER A . A 1 76 ILE 76 76 ILE ILE A . A 1 77 PRO 77 77 PRO PRO A . A 1 78 VAL 78 78 VAL VAL A . A 1 79 MET 79 79 MET MET A . A 1 80 ALA 80 80 ALA ALA A . A 1 81 LYS 81 81 LYS LYS A . A 1 82 ALA 82 82 ALA ALA A . A 1 83 ARG 83 83 ARG ARG A . A 1 84 ILE 84 84 ILE ILE A . A 1 85 GLY 85 85 GLY GLY A . A 1 86 HIS 86 86 HIS HIS A . A 1 87 ILE 87 87 ILE ILE A . A 1 88 VAL 88 88 VAL VAL A . A 1 89 GLU 89 89 GLU GLU A . A 1 90 ALA 90 90 ALA ALA A . A 1 91 ARG 91 91 ARG ARG A . A 1 92 VAL 92 92 VAL VAL A . A 1 93 LEU 93 93 LEU LEU A . A 1 94 GLU 94 94 GLU GLU A . A 1 95 ALA 95 95 ALA ALA A . A 1 96 MET 96 96 MET MET A . A 1 97 GLY 97 97 GLY GLY A . A 1 98 VAL 98 98 VAL VAL A . A 1 99 ASP 99 99 ASP ASP A . A 1 100 TYR 100 100 TYR TYR A . A 1 101 ILE 101 101 ILE ILE A . A 1 102 ASP 102 102 ASP ASP A . A 1 103 GLU 103 103 GLU GLU A . A 1 104 SER 104 104 SER SER A . A 1 105 GLU 105 105 GLU GLU A . A 1 106 VAL 106 106 VAL VAL A . A 1 107 LEU 107 107 LEU LEU A . A 1 108 THR 108 108 THR THR A . A 1 109 PRO 109 109 PRO PRO A . A 1 110 ALA 110 110 ALA ALA A . A 1 111 ASP 111 111 ASP ASP A . A 1 112 GLU 112 112 GLU GLU A . A 1 113 GLU 113 113 GLU GLU A . A 1 114 PHE 114 114 PHE PHE A . A 1 115 HIS 115 115 HIS HIS A . A 1 116 LEU 116 116 LEU LEU A . A 1 117 ASN 117 117 ASN ASN A . A 1 118 LYS 118 118 LYS LYS A . A 1 119 ASN 119 119 ASN ASN A . A 1 120 GLU 120 120 GLU GLU A . A 1 121 TYR 121 121 TYR TYR A . A 1 122 THR 122 122 THR THR A . A 1 123 VAL 123 123 VAL VAL A . A 1 124 PRO 124 124 PRO PRO A . A 1 125 PHE 125 125 PHE PHE A . A 1 126 VAL 126 126 VAL VAL A . A 1 127 CYS 127 127 CYS CYS A . A 1 128 GLY 128 128 GLY GLY A . A 1 129 CYS 129 129 CYS CYS A . A 1 130 ARG 130 130 ARG ARG A . A 1 131 ASP 131 131 ASP ASP A . A 1 132 LEU 132 132 LEU LEU A . A 1 133 GLY 133 133 GLY GLY A . A 1 134 GLU 134 134 GLU GLU A . A 1 135 ALA 135 135 ALA ALA A . A 1 136 THR 136 136 THR THR A . A 1 137 ARG 137 137 ARG ARG A . A 1 138 ARG 138 138 ARG ARG A . A 1 139 ILE 139 139 ILE ILE A . A 1 140 ALA 140 140 ALA ALA A . A 1 141 GLU 141 141 GLU GLU A . A 1 142 GLY 142 142 GLY GLY A . A 1 143 ALA 143 143 ALA ALA A . A 1 144 SER 144 144 SER SER A . A 1 145 MET 145 145 MET MET A . A 1 146 LEU 146 146 LEU LEU A . A 1 147 ARG 147 147 ARG ARG A . A 1 148 THR 148 148 THR THR A . A 1 149 LYS 149 149 LYS LYS A . A 1 150 GLY 150 150 GLY GLY A . A 1 151 GLU 151 151 GLU GLU A . A 1 152 PRO 152 152 PRO PRO A . A 1 153 GLY 153 153 GLY GLY A . A 1 154 THR 154 154 THR THR A . A 1 155 GLY 155 155 GLY GLY A . A 1 156 ASN 156 156 ASN ASN A . A 1 157 ILE 157 157 ILE ILE A . A 1 158 VAL 158 158 VAL VAL A . A 1 159 GLU 159 159 GLU GLU A . A 1 160 ALA 160 160 ALA ALA A . A 1 161 VAL 161 161 VAL VAL A . A 1 162 ARG 162 162 ARG ARG A . A 1 163 HIS 163 163 HIS HIS A . A 1 164 MET 164 164 MET MET A . A 1 165 ARG 165 165 ARG ARG A . A 1 166 LYS 166 166 LYS LYS A . A 1 167 VAL 167 167 VAL VAL A . A 1 168 ASN 168 168 ASN ASN A . A 1 169 ALA 169 169 ALA ALA A . A 1 170 GLN 170 170 GLN GLN A . A 1 171 VAL 171 171 VAL VAL A . A 1 172 ARG 172 172 ARG ARG A . A 1 173 LYS 173 173 LYS LYS A . A 1 174 VAL 174 174 VAL VAL A . A 1 175 VAL 175 175 VAL VAL A . A 1 176 ALA 176 176 ALA ALA A . A 1 177 MET 177 177 MET MET A . A 1 178 SER 178 178 SER SER A . A 1 179 GLU 179 179 GLU GLU A . A 1 180 ASP 180 180 ASP ASP A . A 1 181 GLU 181 181 GLU GLU A . A 1 182 LEU 182 182 LEU LEU A . A 1 183 MET 183 183 MET MET A . A 1 184 THR 184 184 THR THR A . A 1 185 GLU 185 185 GLU GLU A . A 1 186 ALA 186 186 ALA ALA A . A 1 187 LYS 187 187 LYS LYS A . A 1 188 ASN 188 188 ASN ASN A . A 1 189 LEU 189 189 LEU LEU A . A 1 190 GLY 190 190 GLY GLY A . A 1 191 ALA 191 191 ALA ALA A . A 1 192 PRO 192 192 PRO PRO A . A 1 193 TYR 193 193 TYR TYR A . A 1 194 GLU 194 194 GLU GLU A . A 1 195 LEU 195 195 LEU LEU A . A 1 196 LEU 196 196 LEU LEU A . A 1 197 LEU 197 197 LEU LEU A . A 1 198 GLN 198 198 GLN GLN A . A 1 199 ILE 199 199 ILE ILE A . A 1 200 LYS 200 200 LYS LYS A . A 1 201 LYS 201 201 LYS LYS A . A 1 202 ASP 202 202 ASP ASP A . A 1 203 GLY 203 203 GLY GLY A . A 1 204 LYS 204 204 LYS LYS A . A 1 205 LEU 205 205 LEU LEU A . A 1 206 PRO 206 206 PRO PRO A . A 1 207 VAL 207 207 VAL VAL A . A 1 208 VAL 208 208 VAL VAL A . A 1 209 ASN 209 209 ASN ASN A . A 1 210 PHE 210 210 PHE PHE A . A 1 211 ALA 211 211 ALA ALA A . A 1 212 ALA 212 212 ALA ALA A . A 1 213 GLY 213 213 GLY GLY A . A 1 214 GLY 214 214 GLY GLY A . A 1 215 VAL 215 215 VAL VAL A . A 1 216 ALA 216 216 ALA ALA A . A 1 217 THR 217 217 THR THR A . A 1 218 PRO 218 218 PRO PRO A . A 1 219 ALA 219 219 ALA ALA A . A 1 220 ASP 220 220 ASP ASP A . A 1 221 ALA 221 221 ALA ALA A . A 1 222 ALA 222 222 ALA ALA A . A 1 223 LEU 223 223 LEU LEU A . A 1 224 MET 224 224 MET MET A . A 1 225 MET 225 225 MET MET A . A 1 226 GLN 226 226 GLN GLN A . A 1 227 LEU 227 227 LEU LEU A . A 1 228 GLY 228 228 GLY GLY A . A 1 229 ALA 229 229 ALA ALA A . A 1 230 ASP 230 230 ASP ASP A . A 1 231 GLY 231 231 GLY GLY A . A 1 232 VAL 232 232 VAL VAL A . A 1 233 PHE 233 233 PHE PHE A . A 1 234 VAL 234 234 VAL VAL A . A 1 235 GLY 235 235 GLY GLY A . A 1 236 SER 236 236 SER SER A . A 1 237 GLY 237 237 GLY GLY A . A 1 238 ILE 238 238 ILE ILE A . A 1 239 PHE 239 239 PHE PHE A . A 1 240 LYS 240 240 LYS LYS A . A 1 241 SER 241 241 SER SER A . A 1 242 ASP 242 242 ASP ASP A . A 1 243 ASN 243 243 ASN ASN A . A 1 244 PRO 244 244 PRO PRO A . A 1 245 ALA 245 245 ALA ALA A . A 1 246 LYS 246 246 LYS LYS A . A 1 247 PHE 247 247 PHE PHE A . A 1 248 ALA 248 248 ALA ALA A . A 1 249 LYS 249 249 LYS LYS A . A 1 250 ALA 250 250 ALA ALA A . A 1 251 ILE 251 251 ILE ILE A . A 1 252 VAL 252 252 VAL VAL A . A 1 253 GLU 253 253 GLU GLU A . A 1 254 ALA 254 254 ALA ALA A . A 1 255 THR 255 255 THR THR A . A 1 256 THR 256 256 THR THR A . A 1 257 HIS 257 257 HIS HIS A . A 1 258 PHE 258 258 PHE PHE A . A 1 259 THR 259 259 THR THR A . A 1 260 ASP 260 260 ASP ASP A . A 1 261 TYR 261 261 TYR TYR A . A 1 262 LYS 262 262 LYS LYS A . A 1 263 LEU 263 263 LEU LEU A . A 1 264 ILE 264 264 ILE ILE A . A 1 265 ALA 265 265 ALA ALA A . A 1 266 GLU 266 266 GLU GLU A . A 1 267 LEU 267 267 LEU LEU A . A 1 268 SER 268 268 SER SER A . A 1 269 LYS 269 269 LYS LYS A . A 1 270 GLU 270 270 GLU GLU A . A 1 271 LEU 271 271 LEU LEU A . A 1 272 GLY 272 272 GLY GLY A . A 1 273 THR 273 273 THR THR A . A 1 274 ALA 274 274 ALA ALA A . A 1 275 MET 275 275 MET MET A . A 1 276 LYS 276 276 LYS LYS A . A 1 277 GLY 277 277 GLY GLY A . A 1 278 ILE 278 278 ILE ILE A . A 1 279 GLU 279 279 GLU GLU A . A 1 280 ILE 280 280 ILE ILE A . A 1 281 SER 281 281 SER SER A . A 1 282 ASN 282 282 ASN ASN A . A 1 283 LEU 283 283 LEU LEU A . A 1 284 LEU 284 284 LEU LEU A . A 1 285 PRO 285 285 PRO PRO A . A 1 286 GLU 286 286 GLU GLU A . A 1 287 GLN 287 287 GLN GLN A . A 1 288 ARG 288 288 ARG ARG A . A 1 289 MET 289 289 MET MET A . A 1 290 GLN 290 290 GLN GLN A . A 1 291 GLU 291 291 GLU GLU A . A 1 292 ARG 292 292 ARG ARG A . A 1 293 GLY 293 293 GLY GLY A . A 1 294 TRP 294 294 TRP TRP A . B 2 1 MET 1 1 MET MET B . B 2 2 SER 2 2 SER SER B . B 2 3 GLU 3 3 GLU GLU B . B 2 4 VAL 4 4 VAL VAL B . B 2 5 HIS 5 5 HIS HIS B . B 2 6 LYS 6 6 LYS LYS B . B 2 7 ALA 7 7 ALA ALA B . B 2 8 ILE 8 8 ILE ILE B . B 2 9 SER 9 9 SER SER B . B 2 10 ALA 10 10 ALA ALA B . B 2 11 HIS 11 11 HIS HIS B . B 2 12 SER 12 12 SER SER B . B 2 13 SER 13 13 SER SER B . B 2 14 LYS 14 14 LYS LYS B . B 2 15 GLN 15 15 GLN GLN B . B 2 16 HIS 16 16 HIS HIS B . B 2 17 GLU 17 17 GLU GLU B . B 2 18 HIS 18 18 HIS HIS B . B 2 19 ILE 19 19 ILE ILE B . B 2 20 LYS 20 20 LYS LYS B . B 2 21 ALA 21 21 ALA ALA B . B 2 22 PHE 22 22 PHE PHE B . B 2 23 MET 23 23 MET MET B . B 2 24 ARG 24 24 ARG ARG B . B 2 25 LEU 25 25 LEU LEU B . B 2 26 GLU 26 26 GLU GLU B . B 2 27 ASN 27 27 ASN ASN B . B 2 28 MET 28 28 MET MET B . B 2 29 ARG 29 29 ARG ARG B . B 2 30 GLU 30 30 GLU GLU B . B 2 31 LEU 31 31 LEU LEU B . B 2 32 ALA 32 32 ALA ALA B . B 2 33 ILE 33 33 ILE ILE B . B 2 34 GLU 34 34 GLU GLU B . B 2 35 GLU 35 35 GLU GLU B . B 2 36 ALA 36 36 ALA ALA B . B 2 37 VAL 37 37 VAL VAL B . B 2 38 ALA 38 38 ALA ALA B . B 2 39 LYS 39 39 LYS LYS B . B 2 40 CYS 40 40 CYS CYS B . B 2 41 ARG 41 41 ARG ARG B . B 2 42 ASN 42 42 ASN ASN B . B 2 43 ASP 43 43 ASP ASP B . B 2 44 GLU 44 44 GLU GLU B . B 2 45 PRO 45 45 PRO PRO B . B 2 46 TYR 46 46 TYR TYR B . B 2 47 THR 47 47 THR THR B . B 2 48 THR 48 48 THR THR B . B 2 49 ASP 49 49 ASP ASP B . B 2 50 ALA 50 50 ALA ALA B . B 2 51 ILE 51 51 ILE ILE B . B 2 52 ASN 52 52 ASN ASN B . B 2 53 GLU 53 53 GLU GLU B . B 2 54 ILE 54 54 ILE ILE B . B 2 55 THR 55 55 THR THR B . B 2 56 GLU 56 56 GLU GLU B . B 2 57 GLN 57 57 GLN GLN B . B 2 58 MET 58 58 MET MET B . B 2 59 ASN 59 59 ASN ASN B . B 2 60 GLN 60 60 GLN GLN B . B 2 61 LEU 61 61 LEU LEU B . B 2 62 ALA 62 62 ALA ALA B . B 2 63 LYS 63 63 LYS LYS B . B 2 64 LYS 64 64 LYS LYS B . B 2 65 GLY 65 65 GLY GLY B . B 2 66 ILE 66 66 ILE ILE B . B 2 67 VAL 67 67 VAL VAL B . B 2 68 PRO 68 68 PRO PRO B . B 2 69 THR 69 69 THR THR B . B 2 70 ARG 70 70 ARG ARG B . B 2 71 ARG 71 71 ARG ARG B . B 2 72 LEU 72 72 LEU LEU B . B 2 73 VAL 73 73 VAL VAL B . B 2 74 SER 74 74 SER SER B . B 2 75 LYS 75 75 LYS LYS B . B 2 76 GLU 76 76 GLU GLU B . B 2 77 MET 77 77 MET MET B . B 2 78 VAL 78 78 VAL VAL B . B 2 79 ARG 79 79 ARG ARG B . B 2 80 GLU 80 80 GLU GLU B . B 2 81 TYR 81 81 TYR TYR B . B 2 82 VAL 82 82 VAL VAL B . B 2 83 SER 83 83 SER SER B . B 2 84 ARG 84 84 ARG ARG B . B 2 85 MET 85 85 MET MET B . # # loop_ # #