data_9A7O # _entry.id 9A7O # loop_ _atom_type.symbol C H N O S # loop_ _audit_author.name _audit_author.pdbx_ordinal "Stahl, K." 1 "Brock, O." 2 "Rappsilber, J." 3 # loop_ _audit_conform.dict_location _audit_conform.dict_name _audit_conform.dict_version https://mmcif.wwpdb.org/dictionaries/ascii/mmcif_ihm_ext.dic mmcif_ihm_ext.dic 1.26 http://mmcif.wwpdb.org/dictionaries/ascii/mmcif_pdbx_v50.dic mmcif_pdbx.dic 5.395 # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 9A7O _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2024-01-24 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2024-09-18 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 9A7O pdb_00009a7o 10.2210/pdb9a7o/pdb PDB-Dev PDBDEV_00000353 PDBDEV_00000353 ? # _ihm_entry_collection.id PDBDEV_G_1000003 _ihm_entry_collection.name . _ihm_entry_collection.details 'Collection of entries belonging to the publication: "Modelling protein complexes with crosslinking mass spectrometry and deep learning"' # _ihm_entry_collection_mapping.collection_id PDBDEV_G_1000003 _ihm_entry_collection_mapping.entry_id 9A7O # loop_ _chem_comp.formula _chem_comp.formula_weight _chem_comp.id _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.type "C3 H7 N O2" 89.094 ALA . ALANINE . "L-peptide linking" "C6 H15 N4 O2 1" 175.212 ARG . ARGININE . "L-peptide linking" "C4 H8 N2 O3" 132.119 ASN . ASPARAGINE . "L-peptide linking" "C4 H7 N O4" 133.103 ASP . "ASPARTIC ACID" . "L-peptide linking" "C3 H7 N O2 S" 121.154 CYS . CYSTEINE . "L-peptide linking" "C5 H10 N2 O3" 146.146 GLN . GLUTAMINE . "L-peptide linking" "C5 H9 N O4" 147.13 GLU . "GLUTAMIC ACID" . "L-peptide linking" "C2 H5 N O2" 75.067 GLY . GLYCINE . "peptide linking" "C6 H10 N3 O2 1" 156.165 HIS . HISTIDINE . "L-peptide linking" "C6 H13 N O2" 131.175 ILE . ISOLEUCINE . "L-peptide linking" "C6 H13 N O2" 131.175 LEU . LEUCINE . "L-peptide linking" "C6 H15 N2 O2 1" 147.198 LYS . LYSINE . "L-peptide linking" "C5 H11 N O2 S" 149.208 MET . METHIONINE . "L-peptide linking" "C9 H11 N O2" 165.192 PHE . PHENYLALANINE . "L-peptide linking" "C5 H9 N O2" 115.132 PRO . PROLINE . "L-peptide linking" "C3 H7 N O3" 105.093 SER . SERINE . "L-peptide linking" "C4 H9 N O3" 119.12 THR . THREONINE . "L-peptide linking" "C11 H12 N2 O2" 204.229 TRP . TRYPTOPHAN . "L-peptide linking" "C9 H11 N O3" 181.191 TYR . TYROSINE . "L-peptide linking" "C5 H11 N O2" 117.148 VAL . VALINE . "L-peptide linking" # _citation.country . _citation.id 1 _citation.journal_abbrev "Nat. Commun." _citation.journal_id_ASTM . _citation.journal_id_CSD . _citation.journal_id_ISSN . _citation.journal_issue . _citation.journal_volume 15 _citation.page_first 7866 _citation.page_last . _citation.pdbx_database_id_DOI 10.1038/s41467-024-51771-2 _citation.pdbx_database_id_PubMed 39251624 _citation.title "Modelling protein complexes with crosslinking mass spectrometry and deep learning" _citation.year 2024 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal 1 "Stahl, K." 1 1 "Warneke, R." 2 1 "Demann, L." 3 1 "Bremenkamp, R." 4 1 "Hormes, B." 5 1 "Brock, O." 6 1 "Stulke, J." 7 1 "Rappsilber, J." 8 # loop_ _entity.details _entity.formula_weight _entity.id _entity.pdbx_description _entity.pdbx_number_of_molecules _entity.src_method _entity.type . 13358.873 1 GPSB_BACSU 1 MAN POLYMER . 50647.355 2 DAPX_BACSU 1 MAN POLYMER # loop_ _entity_poly.entity_id _entity_poly.nstd_chirality _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_sequence_evidence_code _entity_poly.pdbx_strand_id _entity_poly.type 1 . NO NO MLADKVKLSAKEILEKEFKTGVRGYKQEDVDKFLDMIIKDYETFHQEIEELQQENLQLKKQLEEASKKQPVQSNTTNFDILKRLSNLEKHVFGSKLYD MLADKVKLSAKEILEKEFKTGVRGYKQEDVDKFLDMIIKDYETFHQEIEELQQENLQLKKQLEEASKKQPVQSNTTNFDILKRLSNLEKHVFGSKLYD . A polypeptide(L) 2 . NO NO MEHLLNPKAREIEISGIRKFSNLVAQHEDVISLTIGQPDFFTPHHVKAAAKKAIDENVTSYTPNAGYLELRQAVQLYMKKKADFNYDAESEIIITTGASQAIDAAFRTILSPGDEVIMPGPIYPGYEPIINLCGAKPVIVDTTSHGFKLTARLIEDALTPNTKCVVLPYPSNPTGVTLSEEELKSIAALLKGRNVFVLSDEIYSELTYDRPHYSIATYLRDQTIVINGLSKSHSMTGWRIGFLFAPKDIAKHILKVHQYNVSCASSISQKAALEAVTNGFDDALIMREQYKKRLDYVYDRLVSMGLDVVKPSGAFYIFPSIKSFGMTSFDFSMALLEDAGVALVPGSSFSTYGEGYVRLSFACSMDTLREGLDRLELFVLKKREAMQTINNGV MEHLLNPKAREIEISGIRKFSNLVAQHEDVISLTIGQPDFFTPHHVKAAAKKAIDENVTSYTPNAGYLELRQAVQLYMKKKADFNYDAESEIIITTGASQAIDAAFRTILSPGDEVIMPGPIYPGYEPIINLCGAKPVIVDTTSHGFKLTARLIEDALTPNTKCVVLPYPSNPTGVTLSEEELKSIAALLKGRNVFVLSDEIYSELTYDRPHYSIATYLRDQTIVINGLSKSHSMTGWRIGFLFAPKDIAKHILKVHQYNVSCASSISQKAALEAVTNGFDDALIMREQYKKRLDYVYDRLVSMGLDVVKPSGAFYIFPSIKSFGMTSFDFSMALLEDAGVALVPGSSFSTYGEGYVRLSFACSMDTLREGLDRLELFVLKKREAMQTINNGV . B polypeptide(L) # loop_ _entity_poly_seq.entity_id _entity_poly_seq.hetero _entity_poly_seq.mon_id _entity_poly_seq.num 1 . MET 1 1 . LEU 2 1 . ALA 3 1 . ASP 4 1 . LYS 5 1 . VAL 6 1 . LYS 7 1 . LEU 8 1 . SER 9 1 . ALA 10 1 . LYS 11 1 . GLU 12 1 . ILE 13 1 . LEU 14 1 . GLU 15 1 . LYS 16 1 . GLU 17 1 . PHE 18 1 . LYS 19 1 . THR 20 1 . GLY 21 1 . VAL 22 1 . ARG 23 1 . GLY 24 1 . TYR 25 1 . LYS 26 1 . GLN 27 1 . GLU 28 1 . ASP 29 1 . VAL 30 1 . ASP 31 1 . LYS 32 1 . PHE 33 1 . LEU 34 1 . ASP 35 1 . MET 36 1 . ILE 37 1 . ILE 38 1 . LYS 39 1 . ASP 40 1 . TYR 41 1 . GLU 42 1 . THR 43 1 . PHE 44 1 . HIS 45 1 . GLN 46 1 . GLU 47 1 . ILE 48 1 . GLU 49 1 . GLU 50 1 . LEU 51 1 . GLN 52 1 . GLN 53 1 . GLU 54 1 . ASN 55 1 . LEU 56 1 . GLN 57 1 . LEU 58 1 . LYS 59 1 . LYS 60 1 . GLN 61 1 . LEU 62 1 . GLU 63 1 . GLU 64 1 . ALA 65 1 . SER 66 1 . LYS 67 1 . LYS 68 1 . GLN 69 1 . PRO 70 1 . VAL 71 1 . GLN 72 1 . SER 73 1 . ASN 74 1 . THR 75 1 . THR 76 1 . ASN 77 1 . PHE 78 1 . ASP 79 1 . ILE 80 1 . LEU 81 1 . LYS 82 1 . ARG 83 1 . LEU 84 1 . SER 85 1 . ASN 86 1 . LEU 87 1 . GLU 88 1 . LYS 89 1 . HIS 90 1 . VAL 91 1 . PHE 92 1 . GLY 93 1 . SER 94 1 . LYS 95 1 . LEU 96 1 . TYR 97 1 . ASP 98 2 . MET 1 2 . GLU 2 2 . HIS 3 2 . LEU 4 2 . LEU 5 2 . ASN 6 2 . PRO 7 2 . LYS 8 2 . ALA 9 2 . ARG 10 2 . GLU 11 2 . ILE 12 2 . GLU 13 2 . ILE 14 2 . SER 15 2 . GLY 16 2 . ILE 17 2 . ARG 18 2 . LYS 19 2 . PHE 20 2 . SER 21 2 . ASN 22 2 . LEU 23 2 . VAL 24 2 . ALA 25 2 . GLN 26 2 . HIS 27 2 . GLU 28 2 . ASP 29 2 . VAL 30 2 . ILE 31 2 . SER 32 2 . LEU 33 2 . THR 34 2 . ILE 35 2 . GLY 36 2 . GLN 37 2 . PRO 38 2 . ASP 39 2 . PHE 40 2 . PHE 41 2 . THR 42 2 . PRO 43 2 . HIS 44 2 . HIS 45 2 . VAL 46 2 . LYS 47 2 . ALA 48 2 . ALA 49 2 . ALA 50 2 . LYS 51 2 . LYS 52 2 . ALA 53 2 . ILE 54 2 . ASP 55 2 . GLU 56 2 . ASN 57 2 . VAL 58 2 . THR 59 2 . SER 60 2 . TYR 61 2 . THR 62 2 . PRO 63 2 . ASN 64 2 . ALA 65 2 . GLY 66 2 . TYR 67 2 . LEU 68 2 . GLU 69 2 . LEU 70 2 . ARG 71 2 . GLN 72 2 . ALA 73 2 . VAL 74 2 . GLN 75 2 . LEU 76 2 . TYR 77 2 . MET 78 2 . LYS 79 2 . LYS 80 2 . LYS 81 2 . ALA 82 2 . ASP 83 2 . PHE 84 2 . ASN 85 2 . TYR 86 2 . ASP 87 2 . ALA 88 2 . GLU 89 2 . SER 90 2 . GLU 91 2 . ILE 92 2 . ILE 93 2 . ILE 94 2 . THR 95 2 . THR 96 2 . GLY 97 2 . ALA 98 2 . SER 99 2 . GLN 100 2 . ALA 101 2 . ILE 102 2 . ASP 103 2 . ALA 104 2 . ALA 105 2 . PHE 106 2 . ARG 107 2 . THR 108 2 . ILE 109 2 . LEU 110 2 . SER 111 2 . PRO 112 2 . GLY 113 2 . ASP 114 2 . GLU 115 2 . VAL 116 2 . ILE 117 2 . MET 118 2 . PRO 119 2 . GLY 120 2 . PRO 121 2 . ILE 122 2 . TYR 123 2 . PRO 124 2 . GLY 125 2 . TYR 126 2 . GLU 127 2 . PRO 128 2 . ILE 129 2 . ILE 130 2 . ASN 131 2 . LEU 132 2 . CYS 133 2 . GLY 134 2 . ALA 135 2 . LYS 136 2 . PRO 137 2 . VAL 138 2 . ILE 139 2 . VAL 140 2 . ASP 141 2 . THR 142 2 . THR 143 2 . SER 144 2 . HIS 145 2 . GLY 146 2 . PHE 147 2 . LYS 148 2 . LEU 149 2 . THR 150 2 . ALA 151 2 . ARG 152 2 . LEU 153 2 . ILE 154 2 . GLU 155 2 . ASP 156 2 . ALA 157 2 . LEU 158 2 . THR 159 2 . PRO 160 2 . ASN 161 2 . THR 162 2 . LYS 163 2 . CYS 164 2 . VAL 165 2 . VAL 166 2 . LEU 167 2 . PRO 168 2 . TYR 169 2 . PRO 170 2 . SER 171 2 . ASN 172 2 . PRO 173 2 . THR 174 2 . GLY 175 2 . VAL 176 2 . THR 177 2 . LEU 178 2 . SER 179 2 . GLU 180 2 . GLU 181 2 . GLU 182 2 . LEU 183 2 . LYS 184 2 . SER 185 2 . ILE 186 2 . ALA 187 2 . ALA 188 2 . LEU 189 2 . LEU 190 2 . LYS 191 2 . GLY 192 2 . ARG 193 2 . ASN 194 2 . VAL 195 2 . PHE 196 2 . VAL 197 2 . LEU 198 2 . SER 199 2 . ASP 200 2 . GLU 201 2 . ILE 202 2 . TYR 203 2 . SER 204 2 . GLU 205 2 . LEU 206 2 . THR 207 2 . TYR 208 2 . ASP 209 2 . ARG 210 2 . PRO 211 2 . HIS 212 2 . TYR 213 2 . SER 214 2 . ILE 215 2 . ALA 216 2 . THR 217 2 . TYR 218 2 . LEU 219 2 . ARG 220 2 . ASP 221 2 . GLN 222 2 . THR 223 2 . ILE 224 2 . VAL 225 2 . ILE 226 2 . ASN 227 2 . GLY 228 2 . LEU 229 2 . SER 230 2 . LYS 231 2 . SER 232 2 . HIS 233 2 . SER 234 2 . MET 235 2 . THR 236 2 . GLY 237 2 . TRP 238 2 . ARG 239 2 . ILE 240 2 . GLY 241 2 . PHE 242 2 . LEU 243 2 . PHE 244 2 . ALA 245 2 . PRO 246 2 . LYS 247 2 . ASP 248 2 . ILE 249 2 . ALA 250 2 . LYS 251 2 . HIS 252 2 . ILE 253 2 . LEU 254 2 . LYS 255 2 . VAL 256 2 . HIS 257 2 . GLN 258 2 . TYR 259 2 . ASN 260 2 . VAL 261 2 . SER 262 2 . CYS 263 2 . ALA 264 2 . SER 265 2 . SER 266 2 . ILE 267 2 . SER 268 2 . GLN 269 2 . LYS 270 2 . ALA 271 2 . ALA 272 2 . LEU 273 2 . GLU 274 2 . ALA 275 2 . VAL 276 2 . THR 277 2 . ASN 278 2 . GLY 279 2 . PHE 280 2 . ASP 281 2 . ASP 282 2 . ALA 283 2 . LEU 284 2 . ILE 285 2 . MET 286 2 . ARG 287 2 . GLU 288 2 . GLN 289 2 . TYR 290 2 . LYS 291 2 . LYS 292 2 . ARG 293 2 . LEU 294 2 . ASP 295 2 . TYR 296 2 . VAL 297 2 . TYR 298 2 . ASP 299 2 . ARG 300 2 . LEU 301 2 . VAL 302 2 . SER 303 2 . MET 304 2 . GLY 305 2 . LEU 306 2 . ASP 307 2 . VAL 308 2 . VAL 309 2 . LYS 310 2 . PRO 311 2 . SER 312 2 . GLY 313 2 . ALA 314 2 . PHE 315 2 . TYR 316 2 . ILE 317 2 . PHE 318 2 . PRO 319 2 . SER 320 2 . ILE 321 2 . LYS 322 2 . SER 323 2 . PHE 324 2 . GLY 325 2 . MET 326 2 . THR 327 2 . SER 328 2 . PHE 329 2 . ASP 330 2 . PHE 331 2 . SER 332 2 . MET 333 2 . ALA 334 2 . LEU 335 2 . LEU 336 2 . GLU 337 2 . ASP 338 2 . ALA 339 2 . GLY 340 2 . VAL 341 2 . ALA 342 2 . LEU 343 2 . VAL 344 2 . PRO 345 2 . GLY 346 2 . SER 347 2 . SER 348 2 . PHE 349 2 . SER 350 2 . THR 351 2 . TYR 352 2 . GLY 353 2 . GLU 354 2 . GLY 355 2 . TYR 356 2 . VAL 357 2 . ARG 358 2 . LEU 359 2 . SER 360 2 . PHE 361 2 . ALA 362 2 . CYS 363 2 . SER 364 2 . MET 365 2 . ASP 366 2 . THR 367 2 . LEU 368 2 . ARG 369 2 . GLU 370 2 . GLY 371 2 . LEU 372 2 . ASP 373 2 . ARG 374 2 . LEU 375 2 . GLU 376 2 . LEU 377 2 . PHE 378 2 . VAL 379 2 . LEU 380 2 . LYS 381 2 . LYS 382 2 . ARG 383 2 . GLU 384 2 . ALA 385 2 . MET 386 2 . GLN 387 2 . THR 388 2 . ILE 389 2 . ASN 390 2 . ASN 391 2 . GLY 392 2 . VAL 393 # _ihm_chemical_component_descriptor.auth_name SDA _ihm_chemical_component_descriptor.chemical_name "succinimidyl 4,4'-azipentanoate" _ihm_chemical_component_descriptor.common_name . _ihm_chemical_component_descriptor.details . _ihm_chemical_component_descriptor.id 1 _ihm_chemical_component_descriptor.inchi 1S/C9H11N3O4/c1-9(10-11-9)5-4-8(15)16-12-6(13)2-3-7(12)14/h2-5H2,1H3 _ihm_chemical_component_descriptor.inchi_key " SYYLQNPWAPHRFV-UHFFFAOYSA-N" _ihm_chemical_component_descriptor.smiles CC1(N=N1)CCC(ON2C(CCC2=O)=O)=O _ihm_chemical_component_descriptor.smiles_canonical . # _ihm_cross_link_list.comp_id_1 LYS _ihm_cross_link_list.comp_id_2 LYS _ihm_cross_link_list.dataset_list_id 1 _ihm_cross_link_list.details . _ihm_cross_link_list.entity_description_1 GPSB_BACSU _ihm_cross_link_list.entity_description_2 DAPX_BACSU _ihm_cross_link_list.entity_id_1 1 _ihm_cross_link_list.entity_id_2 2 _ihm_cross_link_list.group_id 1 _ihm_cross_link_list.id 1 _ihm_cross_link_list.linker_chem_comp_descriptor_id 1 _ihm_cross_link_list.linker_type SDA _ihm_cross_link_list.seq_id_1 89 _ihm_cross_link_list.seq_id_2 52 # _ihm_cross_link_restraint.asym_id_1 A _ihm_cross_link_restraint.asym_id_2 B _ihm_cross_link_restraint.atom_id_1 . _ihm_cross_link_restraint.atom_id_2 . _ihm_cross_link_restraint.comp_id_1 LYS _ihm_cross_link_restraint.comp_id_2 LYS _ihm_cross_link_restraint.conditional_crosslink_flag . _ihm_cross_link_restraint.distance_threshold 25 _ihm_cross_link_restraint.entity_id_1 1 _ihm_cross_link_restraint.entity_id_2 2 _ihm_cross_link_restraint.group_id 1 _ihm_cross_link_restraint.id 1 _ihm_cross_link_restraint.model_granularity by-residue _ihm_cross_link_restraint.pseudo_site_flag NO _ihm_cross_link_restraint.psi 0.95 _ihm_cross_link_restraint.restraint_type "upper bound" _ihm_cross_link_restraint.seq_id_1 89 _ihm_cross_link_restraint.seq_id_2 52 _ihm_cross_link_restraint.sigma_1 . _ihm_cross_link_restraint.sigma_2 . # _ihm_dataset_group.application . _ihm_dataset_group.details . _ihm_dataset_group.id 1 _ihm_dataset_group.name . # _ihm_dataset_group_link.dataset_list_id 1 _ihm_dataset_group_link.group_id 1 # _ihm_dataset_list.data_type "Crosslinking-MS data" _ihm_dataset_list.database_hosted YES _ihm_dataset_list.details . _ihm_dataset_list.id 1 # _ihm_dataset_related_db_reference.accession_code PXD035508 _ihm_dataset_related_db_reference.dataset_list_id 1 _ihm_dataset_related_db_reference.db_name PRIDE _ihm_dataset_related_db_reference.details . _ihm_dataset_related_db_reference.id 1 _ihm_dataset_related_db_reference.version . # loop_ _ihm_entity_poly_segment.comp_id_begin _ihm_entity_poly_segment.comp_id_end _ihm_entity_poly_segment.entity_id _ihm_entity_poly_segment.id _ihm_entity_poly_segment.seq_id_begin _ihm_entity_poly_segment.seq_id_end MET ASP 1 1 1 98 MET VAL 2 2 1 393 # _ihm_model_group.details . _ihm_model_group.id 1 _ihm_model_group.name . # _ihm_model_group_link.group_id 1 _ihm_model_group_link.model_id 1 # _ihm_model_list.assembly_id 1 _ihm_model_list.model_id 1 _ihm_model_list.model_name . _ihm_model_list.protocol_id 1 _ihm_model_list.representation_id 1 # _ihm_model_representation.details . _ihm_model_representation.id 1 _ihm_model_representation.name . # loop_ _ihm_model_representation_details.description _ihm_model_representation_details.entity_asym_id _ihm_model_representation_details.entity_description _ihm_model_representation_details.entity_id _ihm_model_representation_details.entity_poly_segment_id _ihm_model_representation_details.id _ihm_model_representation_details.model_granularity _ihm_model_representation_details.model_mode _ihm_model_representation_details.model_object_count _ihm_model_representation_details.model_object_primitive _ihm_model_representation_details.representation_id _ihm_model_representation_details.starting_model_id . A GPSB_BACSU 1 1 1 by-atom flexible . atomistic 1 . . B DAPX_BACSU 2 2 2 by-atom flexible . atomistic 1 . # _ihm_modeling_protocol.details . _ihm_modeling_protocol.id 1 _ihm_modeling_protocol.num_steps 1 _ihm_modeling_protocol.protocol_name AlphaLink2 # _ihm_modeling_protocol_details.dataset_group_id 1 _ihm_modeling_protocol_details.description . _ihm_modeling_protocol_details.ensemble_flag NO _ihm_modeling_protocol_details.id 1 _ihm_modeling_protocol_details.multi_scale_flag NO _ihm_modeling_protocol_details.multi_state_flag NO _ihm_modeling_protocol_details.num_models_begin 0 _ihm_modeling_protocol_details.num_models_end 1 _ihm_modeling_protocol_details.ordered_flag NO _ihm_modeling_protocol_details.protocol_id 1 _ihm_modeling_protocol_details.script_file_id . _ihm_modeling_protocol_details.software_id 1 _ihm_modeling_protocol_details.step_id 1 _ihm_modeling_protocol_details.step_method AlphaLink2 _ihm_modeling_protocol_details.step_name AlphaLink2 _ihm_modeling_protocol_details.struct_assembly_description . _ihm_modeling_protocol_details.struct_assembly_id 1 # _ihm_struct_assembly.description "Integrative model of GPSB-DAPX by crosslinking MS and deep learning" _ihm_struct_assembly.id 1 _ihm_struct_assembly.name GPSB-DAPX # loop_ _ihm_struct_assembly_details.assembly_id _ihm_struct_assembly_details.asym_id _ihm_struct_assembly_details.entity_description _ihm_struct_assembly_details.entity_id _ihm_struct_assembly_details.entity_poly_segment_id _ihm_struct_assembly_details.id _ihm_struct_assembly_details.parent_assembly_id 1 A GPSB_BACSU 1 1 1 1 1 B DAPX_BACSU 2 2 2 1 # _software.citation_id 1 _software.classification "model building" _software.description "Modelling protein complexes with crosslinking mass spectrometry and deep learning" _software.location https://github.com/Rappsilber-Laboratory/AlphaLink2 _software.name AlphaLink2 _software.pdbx_ordinal 1 _software.type program _software.version 1.0 # _struct.entry_id 9A7O _struct.pdbx_CASP_flag . _struct.pdbx_descriptor . _struct.pdbx_details . _struct.pdbx_model_details . _struct.pdbx_model_type_details . _struct.pdbx_structure_determination_methodology integrative _struct.title "Integrative model of GPSB-DAPX by crosslinking MS and deep learning" # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_PDB_id _struct_asym.pdbx_alt_id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.pdbx_order _struct_asym.pdbx_type GPSB_BACSU 1 A . . . . . . DAPX_BACSU 2 B . . . . . . # loop_ _struct_ref.db_code _struct_ref.db_name _struct_ref.details _struct_ref.entity_id _struct_ref.id _struct_ref.pdbx_align_begin _struct_ref.pdbx_align_end _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.pdbx_seq_one_letter_code A UNP . 1 1 1 . P0CI74 . MLADKVKLSAKEILEKEFKTGVRGYKQEDVDKFLDMIIKDYETFHQEIEELQQENLQLKKQLEEASKKQPVQSNTTNFDILKRLSNLEKHVFGSKLYD B UNP . 2 2 1 . P16524 . MEHLLNPKAREIEISGIRKFSNLVAQHEDVISLTIGQPDFFTPHHVKAAAKKAIDENVTSYTPNAGYLELRQAVQLYMKKKADFNYDAESEIIITTGASQAIDAAFRTILSPGDEVIMPGPIYPGYEPIINLCGAKPVIVDTTSHGFKLTARLIEDALTPNTKCVVLPYPSNPTGVTLSEEELKSIAALLKGRNVFVLSDEIYSELTYDRPHYSIATYLRDQTIVINGLSKSHSMTGWRIGFLFAPKDIAKHILKVHQYNVSCASSISQKAALEAVTNGFDDALIMREQYKKRLDYVYDRLVSMGLDVVKPSGAFYIFPSIKSFGMTSFDFSMALLEDAGVALVPGSSFSTYGEGYVRLSFACSMDTLREGLDRLELFVLKKREAMQTINNGV # loop_ _struct_ref_seq.align_id _struct_ref_seq.db_align_beg _struct_ref_seq.db_align_end _struct_ref_seq.ref_id _struct_ref_seq.seq_align_beg _struct_ref_seq.seq_align_end 1 1 98 1 1 98 2 1 393 2 1 393 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code A 1 1 MET 1 1 MET MET A . A 1 2 LEU 2 2 LEU LEU A . A 1 3 ALA 3 3 ALA ALA A . A 1 4 ASP 4 4 ASP ASP A . A 1 5 LYS 5 5 LYS LYS A . A 1 6 VAL 6 6 VAL VAL A . A 1 7 LYS 7 7 LYS LYS A . A 1 8 LEU 8 8 LEU LEU A . A 1 9 SER 9 9 SER SER A . A 1 10 ALA 10 10 ALA ALA A . A 1 11 LYS 11 11 LYS LYS A . A 1 12 GLU 12 12 GLU GLU A . A 1 13 ILE 13 13 ILE ILE A . A 1 14 LEU 14 14 LEU LEU A . A 1 15 GLU 15 15 GLU GLU A . A 1 16 LYS 16 16 LYS LYS A . A 1 17 GLU 17 17 GLU GLU A . A 1 18 PHE 18 18 PHE PHE A . A 1 19 LYS 19 19 LYS LYS A . A 1 20 THR 20 20 THR THR A . A 1 21 GLY 21 21 GLY GLY A . A 1 22 VAL 22 22 VAL VAL A . A 1 23 ARG 23 23 ARG ARG A . A 1 24 GLY 24 24 GLY GLY A . A 1 25 TYR 25 25 TYR TYR A . A 1 26 LYS 26 26 LYS LYS A . A 1 27 GLN 27 27 GLN GLN A . A 1 28 GLU 28 28 GLU GLU A . A 1 29 ASP 29 29 ASP ASP A . A 1 30 VAL 30 30 VAL VAL A . A 1 31 ASP 31 31 ASP ASP A . A 1 32 LYS 32 32 LYS LYS A . A 1 33 PHE 33 33 PHE PHE A . A 1 34 LEU 34 34 LEU LEU A . A 1 35 ASP 35 35 ASP ASP A . A 1 36 MET 36 36 MET MET A . A 1 37 ILE 37 37 ILE ILE A . A 1 38 ILE 38 38 ILE ILE A . A 1 39 LYS 39 39 LYS LYS A . A 1 40 ASP 40 40 ASP ASP A . A 1 41 TYR 41 41 TYR TYR A . A 1 42 GLU 42 42 GLU GLU A . A 1 43 THR 43 43 THR THR A . A 1 44 PHE 44 44 PHE PHE A . A 1 45 HIS 45 45 HIS HIS A . A 1 46 GLN 46 46 GLN GLN A . A 1 47 GLU 47 47 GLU GLU A . A 1 48 ILE 48 48 ILE ILE A . A 1 49 GLU 49 49 GLU GLU A . A 1 50 GLU 50 50 GLU GLU A . A 1 51 LEU 51 51 LEU LEU A . A 1 52 GLN 52 52 GLN GLN A . A 1 53 GLN 53 53 GLN GLN A . A 1 54 GLU 54 54 GLU GLU A . A 1 55 ASN 55 55 ASN ASN A . A 1 56 LEU 56 56 LEU LEU A . A 1 57 GLN 57 57 GLN GLN A . A 1 58 LEU 58 58 LEU LEU A . A 1 59 LYS 59 59 LYS LYS A . A 1 60 LYS 60 60 LYS LYS A . A 1 61 GLN 61 61 GLN GLN A . A 1 62 LEU 62 62 LEU LEU A . A 1 63 GLU 63 63 GLU GLU A . A 1 64 GLU 64 64 GLU GLU A . A 1 65 ALA 65 65 ALA ALA A . A 1 66 SER 66 66 SER SER A . A 1 67 LYS 67 67 LYS LYS A . A 1 68 LYS 68 68 LYS LYS A . A 1 69 GLN 69 69 GLN GLN A . A 1 70 PRO 70 70 PRO PRO A . A 1 71 VAL 71 71 VAL VAL A . A 1 72 GLN 72 72 GLN GLN A . A 1 73 SER 73 73 SER SER A . A 1 74 ASN 74 74 ASN ASN A . A 1 75 THR 75 75 THR THR A . A 1 76 THR 76 76 THR THR A . A 1 77 ASN 77 77 ASN ASN A . A 1 78 PHE 78 78 PHE PHE A . A 1 79 ASP 79 79 ASP ASP A . A 1 80 ILE 80 80 ILE ILE A . A 1 81 LEU 81 81 LEU LEU A . A 1 82 LYS 82 82 LYS LYS A . A 1 83 ARG 83 83 ARG ARG A . A 1 84 LEU 84 84 LEU LEU A . A 1 85 SER 85 85 SER SER A . A 1 86 ASN 86 86 ASN ASN A . A 1 87 LEU 87 87 LEU LEU A . A 1 88 GLU 88 88 GLU GLU A . A 1 89 LYS 89 89 LYS LYS A . A 1 90 HIS 90 90 HIS HIS A . A 1 91 VAL 91 91 VAL VAL A . A 1 92 PHE 92 92 PHE PHE A . A 1 93 GLY 93 93 GLY GLY A . A 1 94 SER 94 94 SER SER A . A 1 95 LYS 95 95 LYS LYS A . A 1 96 LEU 96 96 LEU LEU A . A 1 97 TYR 97 97 TYR TYR A . A 1 98 ASP 98 98 ASP ASP A . B 2 1 MET 1 1 MET MET B . B 2 2 GLU 2 2 GLU GLU B . B 2 3 HIS 3 3 HIS HIS B . B 2 4 LEU 4 4 LEU LEU B . B 2 5 LEU 5 5 LEU LEU B . B 2 6 ASN 6 6 ASN ASN B . B 2 7 PRO 7 7 PRO PRO B . B 2 8 LYS 8 8 LYS LYS B . B 2 9 ALA 9 9 ALA ALA B . B 2 10 ARG 10 10 ARG ARG B . B 2 11 GLU 11 11 GLU GLU B . B 2 12 ILE 12 12 ILE ILE B . B 2 13 GLU 13 13 GLU GLU B . B 2 14 ILE 14 14 ILE ILE B . B 2 15 SER 15 15 SER SER B . B 2 16 GLY 16 16 GLY GLY B . B 2 17 ILE 17 17 ILE ILE B . B 2 18 ARG 18 18 ARG ARG B . B 2 19 LYS 19 19 LYS LYS B . B 2 20 PHE 20 20 PHE PHE B . B 2 21 SER 21 21 SER SER B . B 2 22 ASN 22 22 ASN ASN B . B 2 23 LEU 23 23 LEU LEU B . B 2 24 VAL 24 24 VAL VAL B . B 2 25 ALA 25 25 ALA ALA B . B 2 26 GLN 26 26 GLN GLN B . B 2 27 HIS 27 27 HIS HIS B . B 2 28 GLU 28 28 GLU GLU B . B 2 29 ASP 29 29 ASP ASP B . B 2 30 VAL 30 30 VAL VAL B . B 2 31 ILE 31 31 ILE ILE B . B 2 32 SER 32 32 SER SER B . B 2 33 LEU 33 33 LEU LEU B . B 2 34 THR 34 34 THR THR B . B 2 35 ILE 35 35 ILE ILE B . B 2 36 GLY 36 36 GLY GLY B . B 2 37 GLN 37 37 GLN GLN B . B 2 38 PRO 38 38 PRO PRO B . B 2 39 ASP 39 39 ASP ASP B . B 2 40 PHE 40 40 PHE PHE B . B 2 41 PHE 41 41 PHE PHE B . B 2 42 THR 42 42 THR THR B . B 2 43 PRO 43 43 PRO PRO B . B 2 44 HIS 44 44 HIS HIS B . B 2 45 HIS 45 45 HIS HIS B . B 2 46 VAL 46 46 VAL VAL B . B 2 47 LYS 47 47 LYS LYS B . B 2 48 ALA 48 48 ALA ALA B . B 2 49 ALA 49 49 ALA ALA B . B 2 50 ALA 50 50 ALA ALA B . B 2 51 LYS 51 51 LYS LYS B . B 2 52 LYS 52 52 LYS LYS B . B 2 53 ALA 53 53 ALA ALA B . B 2 54 ILE 54 54 ILE ILE B . B 2 55 ASP 55 55 ASP ASP B . B 2 56 GLU 56 56 GLU GLU B . B 2 57 ASN 57 57 ASN ASN B . B 2 58 VAL 58 58 VAL VAL B . B 2 59 THR 59 59 THR THR B . B 2 60 SER 60 60 SER SER B . B 2 61 TYR 61 61 TYR TYR B . B 2 62 THR 62 62 THR THR B . B 2 63 PRO 63 63 PRO PRO B . B 2 64 ASN 64 64 ASN ASN B . B 2 65 ALA 65 65 ALA ALA B . B 2 66 GLY 66 66 GLY GLY B . B 2 67 TYR 67 67 TYR TYR B . B 2 68 LEU 68 68 LEU LEU B . B 2 69 GLU 69 69 GLU GLU B . B 2 70 LEU 70 70 LEU LEU B . B 2 71 ARG 71 71 ARG ARG B . B 2 72 GLN 72 72 GLN GLN B . B 2 73 ALA 73 73 ALA ALA B . B 2 74 VAL 74 74 VAL VAL B . B 2 75 GLN 75 75 GLN GLN B . B 2 76 LEU 76 76 LEU LEU B . B 2 77 TYR 77 77 TYR TYR B . B 2 78 MET 78 78 MET MET B . B 2 79 LYS 79 79 LYS LYS B . B 2 80 LYS 80 80 LYS LYS B . B 2 81 LYS 81 81 LYS LYS B . B 2 82 ALA 82 82 ALA ALA B . B 2 83 ASP 83 83 ASP ASP B . B 2 84 PHE 84 84 PHE PHE B . B 2 85 ASN 85 85 ASN ASN B . B 2 86 TYR 86 86 TYR TYR B . B 2 87 ASP 87 87 ASP ASP B . B 2 88 ALA 88 88 ALA ALA B . B 2 89 GLU 89 89 GLU GLU B . B 2 90 SER 90 90 SER SER B . B 2 91 GLU 91 91 GLU GLU B . B 2 92 ILE 92 92 ILE ILE B . B 2 93 ILE 93 93 ILE ILE B . B 2 94 ILE 94 94 ILE ILE B . B 2 95 THR 95 95 THR THR B . B 2 96 THR 96 96 THR THR B . B 2 97 GLY 97 97 GLY GLY B . B 2 98 ALA 98 98 ALA ALA B . B 2 99 SER 99 99 SER SER B . B 2 100 GLN 100 100 GLN GLN B . B 2 101 ALA 101 101 ALA ALA B . B 2 102 ILE 102 102 ILE ILE B . B 2 103 ASP 103 103 ASP ASP B . B 2 104 ALA 104 104 ALA ALA B . B 2 105 ALA 105 105 ALA ALA B . B 2 106 PHE 106 106 PHE PHE B . B 2 107 ARG 107 107 ARG ARG B . B 2 108 THR 108 108 THR THR B . B 2 109 ILE 109 109 ILE ILE B . B 2 110 LEU 110 110 LEU LEU B . B 2 111 SER 111 111 SER SER B . B 2 112 PRO 112 112 PRO PRO B . B 2 113 GLY 113 113 GLY GLY B . B 2 114 ASP 114 114 ASP ASP B . B 2 115 GLU 115 115 GLU GLU B . B 2 116 VAL 116 116 VAL VAL B . B 2 117 ILE 117 117 ILE ILE B . B 2 118 MET 118 118 MET MET B . B 2 119 PRO 119 119 PRO PRO B . B 2 120 GLY 120 120 GLY GLY B . B 2 121 PRO 121 121 PRO PRO B . B 2 122 ILE 122 122 ILE ILE B . B 2 123 TYR 123 123 TYR TYR B . B 2 124 PRO 124 124 PRO PRO B . B 2 125 GLY 125 125 GLY GLY B . B 2 126 TYR 126 126 TYR TYR B . B 2 127 GLU 127 127 GLU GLU B . B 2 128 PRO 128 128 PRO PRO B . B 2 129 ILE 129 129 ILE ILE B . B 2 130 ILE 130 130 ILE ILE B . B 2 131 ASN 131 131 ASN ASN B . B 2 132 LEU 132 132 LEU LEU B . B 2 133 CYS 133 133 CYS CYS B . B 2 134 GLY 134 134 GLY GLY B . B 2 135 ALA 135 135 ALA ALA B . B 2 136 LYS 136 136 LYS LYS B . B 2 137 PRO 137 137 PRO PRO B . B 2 138 VAL 138 138 VAL VAL B . B 2 139 ILE 139 139 ILE ILE B . B 2 140 VAL 140 140 VAL VAL B . B 2 141 ASP 141 141 ASP ASP B . B 2 142 THR 142 142 THR THR B . B 2 143 THR 143 143 THR THR B . B 2 144 SER 144 144 SER SER B . B 2 145 HIS 145 145 HIS HIS B . B 2 146 GLY 146 146 GLY GLY B . B 2 147 PHE 147 147 PHE PHE B . B 2 148 LYS 148 148 LYS LYS B . B 2 149 LEU 149 149 LEU LEU B . B 2 150 THR 150 150 THR THR B . B 2 151 ALA 151 151 ALA ALA B . B 2 152 ARG 152 152 ARG ARG B . B 2 153 LEU 153 153 LEU LEU B . B 2 154 ILE 154 154 ILE ILE B . B 2 155 GLU 155 155 GLU GLU B . B 2 156 ASP 156 156 ASP ASP B . B 2 157 ALA 157 157 ALA ALA B . B 2 158 LEU 158 158 LEU LEU B . B 2 159 THR 159 159 THR THR B . B 2 160 PRO 160 160 PRO PRO B . B 2 161 ASN 161 161 ASN ASN B . B 2 162 THR 162 162 THR THR B . B 2 163 LYS 163 163 LYS LYS B . B 2 164 CYS 164 164 CYS CYS B . B 2 165 VAL 165 165 VAL VAL B . B 2 166 VAL 166 166 VAL VAL B . B 2 167 LEU 167 167 LEU LEU B . B 2 168 PRO 168 168 PRO PRO B . B 2 169 TYR 169 169 TYR TYR B . B 2 170 PRO 170 170 PRO PRO B . B 2 171 SER 171 171 SER SER B . B 2 172 ASN 172 172 ASN ASN B . B 2 173 PRO 173 173 PRO PRO B . B 2 174 THR 174 174 THR THR B . B 2 175 GLY 175 175 GLY GLY B . B 2 176 VAL 176 176 VAL VAL B . B 2 177 THR 177 177 THR THR B . B 2 178 LEU 178 178 LEU LEU B . B 2 179 SER 179 179 SER SER B . B 2 180 GLU 180 180 GLU GLU B . B 2 181 GLU 181 181 GLU GLU B . B 2 182 GLU 182 182 GLU GLU B . B 2 183 LEU 183 183 LEU LEU B . B 2 184 LYS 184 184 LYS LYS B . B 2 185 SER 185 185 SER SER B . B 2 186 ILE 186 186 ILE ILE B . B 2 187 ALA 187 187 ALA ALA B . B 2 188 ALA 188 188 ALA ALA B . B 2 189 LEU 189 189 LEU LEU B . B 2 190 LEU 190 190 LEU LEU B . B 2 191 LYS 191 191 LYS LYS B . B 2 192 GLY 192 192 GLY GLY B . B 2 193 ARG 193 193 ARG ARG B . B 2 194 ASN 194 194 ASN ASN B . B 2 195 VAL 195 195 VAL VAL B . B 2 196 PHE 196 196 PHE PHE B . B 2 197 VAL 197 197 VAL VAL B . B 2 198 LEU 198 198 LEU LEU B . B 2 199 SER 199 199 SER SER B . B 2 200 ASP 200 200 ASP ASP B . B 2 201 GLU 201 201 GLU GLU B . B 2 202 ILE 202 202 ILE ILE B . B 2 203 TYR 203 203 TYR TYR B . B 2 204 SER 204 204 SER SER B . B 2 205 GLU 205 205 GLU GLU B . B 2 206 LEU 206 206 LEU LEU B . B 2 207 THR 207 207 THR THR B . B 2 208 TYR 208 208 TYR TYR B . B 2 209 ASP 209 209 ASP ASP B . B 2 210 ARG 210 210 ARG ARG B . B 2 211 PRO 211 211 PRO PRO B . B 2 212 HIS 212 212 HIS HIS B . B 2 213 TYR 213 213 TYR TYR B . B 2 214 SER 214 214 SER SER B . B 2 215 ILE 215 215 ILE ILE B . B 2 216 ALA 216 216 ALA ALA B . B 2 217 THR 217 217 THR THR B . B 2 218 TYR 218 218 TYR TYR B . B 2 219 LEU 219 219 LEU LEU B . B 2 220 ARG 220 220 ARG ARG B . B 2 221 ASP 221 221 ASP ASP B . B 2 222 GLN 222 222 GLN GLN B . B 2 223 THR 223 223 THR THR B . B 2 224 ILE 224 224 ILE ILE B . B 2 225 VAL 225 225 VAL VAL B . B 2 226 ILE 226 226 ILE ILE B . B 2 227 ASN 227 227 ASN ASN B . B 2 228 GLY 228 228 GLY GLY B . B 2 229 LEU 229 229 LEU LEU B . B 2 230 SER 230 230 SER SER B . B 2 231 LYS 231 231 LYS LYS B . B 2 232 SER 232 232 SER SER B . B 2 233 HIS 233 233 HIS HIS B . B 2 234 SER 234 234 SER SER B . B 2 235 MET 235 235 MET MET B . B 2 236 THR 236 236 THR THR B . B 2 237 GLY 237 237 GLY GLY B . B 2 238 TRP 238 238 TRP TRP B . B 2 239 ARG 239 239 ARG ARG B . B 2 240 ILE 240 240 ILE ILE B . B 2 241 GLY 241 241 GLY GLY B . B 2 242 PHE 242 242 PHE PHE B . B 2 243 LEU 243 243 LEU LEU B . B 2 244 PHE 244 244 PHE PHE B . B 2 245 ALA 245 245 ALA ALA B . B 2 246 PRO 246 246 PRO PRO B . B 2 247 LYS 247 247 LYS LYS B . B 2 248 ASP 248 248 ASP ASP B . B 2 249 ILE 249 249 ILE ILE B . B 2 250 ALA 250 250 ALA ALA B . B 2 251 LYS 251 251 LYS LYS B . B 2 252 HIS 252 252 HIS HIS B . B 2 253 ILE 253 253 ILE ILE B . B 2 254 LEU 254 254 LEU LEU B . B 2 255 LYS 255 255 LYS LYS B . B 2 256 VAL 256 256 VAL VAL B . B 2 257 HIS 257 257 HIS HIS B . B 2 258 GLN 258 258 GLN GLN B . B 2 259 TYR 259 259 TYR TYR B . B 2 260 ASN 260 260 ASN ASN B . B 2 261 VAL 261 261 VAL VAL B . B 2 262 SER 262 262 SER SER B . B 2 263 CYS 263 263 CYS CYS B . B 2 264 ALA 264 264 ALA ALA B . B 2 265 SER 265 265 SER SER B . B 2 266 SER 266 266 SER SER B . B 2 267 ILE 267 267 ILE ILE B . B 2 268 SER 268 268 SER SER B . B 2 269 GLN 269 269 GLN GLN B . B 2 270 LYS 270 270 LYS LYS B . B 2 271 ALA 271 271 ALA ALA B . B 2 272 ALA 272 272 ALA ALA B . B 2 273 LEU 273 273 LEU LEU B . B 2 274 GLU 274 274 GLU GLU B . B 2 275 ALA 275 275 ALA ALA B . B 2 276 VAL 276 276 VAL VAL B . B 2 277 THR 277 277 THR THR B . B 2 278 ASN 278 278 ASN ASN B . B 2 279 GLY 279 279 GLY GLY B . B 2 280 PHE 280 280 PHE PHE B . B 2 281 ASP 281 281 ASP ASP B . B 2 282 ASP 282 282 ASP ASP B . B 2 283 ALA 283 283 ALA ALA B . B 2 284 LEU 284 284 LEU LEU B . B 2 285 ILE 285 285 ILE ILE B . B 2 286 MET 286 286 MET MET B . B 2 287 ARG 287 287 ARG ARG B . B 2 288 GLU 288 288 GLU GLU B . B 2 289 GLN 289 289 GLN GLN B . B 2 290 TYR 290 290 TYR TYR B . B 2 291 LYS 291 291 LYS LYS B . B 2 292 LYS 292 292 LYS LYS B . B 2 293 ARG 293 293 ARG ARG B . B 2 294 LEU 294 294 LEU LEU B . B 2 295 ASP 295 295 ASP ASP B . B 2 296 TYR 296 296 TYR TYR B . B 2 297 VAL 297 297 VAL VAL B . B 2 298 TYR 298 298 TYR TYR B . B 2 299 ASP 299 299 ASP ASP B . B 2 300 ARG 300 300 ARG ARG B . B 2 301 LEU 301 301 LEU LEU B . B 2 302 VAL 302 302 VAL VAL B . B 2 303 SER 303 303 SER SER B . B 2 304 MET 304 304 MET MET B . B 2 305 GLY 305 305 GLY GLY B . B 2 306 LEU 306 306 LEU LEU B . B 2 307 ASP 307 307 ASP ASP B . B 2 308 VAL 308 308 VAL VAL B . B 2 309 VAL 309 309 VAL VAL B . B 2 310 LYS 310 310 LYS LYS B . B 2 311 PRO 311 311 PRO PRO B . B 2 312 SER 312 312 SER SER B . B 2 313 GLY 313 313 GLY GLY B . B 2 314 ALA 314 314 ALA ALA B . B 2 315 PHE 315 315 PHE PHE B . B 2 316 TYR 316 316 TYR TYR B . B 2 317 ILE 317 317 ILE ILE B . B 2 318 PHE 318 318 PHE PHE B . B 2 319 PRO 319 319 PRO PRO B . B 2 320 SER 320 320 SER SER B . B 2 321 ILE 321 321 ILE ILE B . B 2 322 LYS 322 322 LYS LYS B . B 2 323 SER 323 323 SER SER B . B 2 324 PHE 324 324 PHE PHE B . B 2 325 GLY 325 325 GLY GLY B . B 2 326 MET 326 326 MET MET B . B 2 327 THR 327 327 THR THR B . B 2 328 SER 328 328 SER SER B . B 2 329 PHE 329 329 PHE PHE B . B 2 330 ASP 330 330 ASP ASP B . B 2 331 PHE 331 331 PHE PHE B . B 2 332 SER 332 332 SER SER B . B 2 333 MET 333 333 MET MET B . B 2 334 ALA 334 334 ALA ALA B . B 2 335 LEU 335 335 LEU LEU B . B 2 336 LEU 336 336 LEU LEU B . B 2 337 GLU 337 337 GLU GLU B . B 2 338 ASP 338 338 ASP ASP B . B 2 339 ALA 339 339 ALA ALA B . B 2 340 GLY 340 340 GLY GLY B . B 2 341 VAL 341 341 VAL VAL B . B 2 342 ALA 342 342 ALA ALA B . B 2 343 LEU 343 343 LEU LEU B . B 2 344 VAL 344 344 VAL VAL B . B 2 345 PRO 345 345 PRO PRO B . B 2 346 GLY 346 346 GLY GLY B . B 2 347 SER 347 347 SER SER B . B 2 348 SER 348 348 SER SER B . B 2 349 PHE 349 349 PHE PHE B . B 2 350 SER 350 350 SER SER B . B 2 351 THR 351 351 THR THR B . B 2 352 TYR 352 352 TYR TYR B . B 2 353 GLY 353 353 GLY GLY B . B 2 354 GLU 354 354 GLU GLU B . B 2 355 GLY 355 355 GLY GLY B . B 2 356 TYR 356 356 TYR TYR B . B 2 357 VAL 357 357 VAL VAL B . B 2 358 ARG 358 358 ARG ARG B . B 2 359 LEU 359 359 LEU LEU B . B 2 360 SER 360 360 SER SER B . B 2 361 PHE 361 361 PHE PHE B . B 2 362 ALA 362 362 ALA ALA B . B 2 363 CYS 363 363 CYS CYS B . B 2 364 SER 364 364 SER SER B . B 2 365 MET 365 365 MET MET B . B 2 366 ASP 366 366 ASP ASP B . B 2 367 THR 367 367 THR THR B . B 2 368 LEU 368 368 LEU LEU B . B 2 369 ARG 369 369 ARG ARG B . B 2 370 GLU 370 370 GLU GLU B . B 2 371 GLY 371 371 GLY GLY B . B 2 372 LEU 372 372 LEU LEU B . B 2 373 ASP 373 373 ASP ASP B . B 2 374 ARG 374 374 ARG ARG B . B 2 375 LEU 375 375 LEU LEU B . B 2 376 GLU 376 376 GLU GLU B . B 2 377 LEU 377 377 LEU LEU B . B 2 378 PHE 378 378 PHE PHE B . B 2 379 VAL 379 379 VAL VAL B . B 2 380 LEU 380 380 LEU LEU B . B 2 381 LYS 381 381 LYS LYS B . B 2 382 LYS 382 382 LYS LYS B . B 2 383 ARG 383 383 ARG ARG B . B 2 384 GLU 384 384 GLU GLU B . B 2 385 ALA 385 385 ALA ALA B . B 2 386 MET 386 386 MET MET B . B 2 387 GLN 387 387 GLN GLN B . B 2 388 THR 388 388 THR THR B . B 2 389 ILE 389 389 ILE ILE B . B 2 390 ASN 390 390 ASN ASN B . B 2 391 ASN 391 391 ASN ASN B . B 2 392 GLY 392 392 GLY GLY B . B 2 393 VAL 393 393 VAL VAL B . # # loop_ # #