data_9A7W # _entry.id 9A7W # loop_ _atom_type.symbol C H N O S # loop_ _audit_author.name _audit_author.pdbx_ordinal "Stahl, K." 1 "Brock, O." 2 "Rappsilber, J." 3 # loop_ _audit_conform.dict_location _audit_conform.dict_name _audit_conform.dict_version https://mmcif.wwpdb.org/dictionaries/ascii/mmcif_ihm_ext.dic mmcif_ihm_ext.dic 1.26 http://mmcif.wwpdb.org/dictionaries/ascii/mmcif_pdbx_v50.dic mmcif_pdbx.dic 5.395 # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 9A7W _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2024-01-24 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2024-09-18 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 9A7W pdb_00009a7w 10.2210/pdb9a7w/pdb PDB-Dev PDBDEV_00000361 PDBDEV_00000361 ? # _ihm_entry_collection.id PDBDEV_G_1000003 _ihm_entry_collection.name . _ihm_entry_collection.details 'Collection of entries belonging to the publication: "Modelling protein complexes with crosslinking mass spectrometry and deep learning"' # _ihm_entry_collection_mapping.collection_id PDBDEV_G_1000003 _ihm_entry_collection_mapping.entry_id 9A7W # loop_ _chem_comp.formula _chem_comp.formula_weight _chem_comp.id _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.type "C3 H7 N O2" 89.094 ALA . ALANINE . "L-peptide linking" "C6 H15 N4 O2 1" 175.212 ARG . ARGININE . "L-peptide linking" "C4 H8 N2 O3" 132.119 ASN . ASPARAGINE . "L-peptide linking" "C4 H7 N O4" 133.103 ASP . "ASPARTIC ACID" . "L-peptide linking" "C3 H7 N O2 S" 121.154 CYS . CYSTEINE . "L-peptide linking" "C5 H10 N2 O3" 146.146 GLN . GLUTAMINE . "L-peptide linking" "C5 H9 N O4" 147.13 GLU . "GLUTAMIC ACID" . "L-peptide linking" "C2 H5 N O2" 75.067 GLY . GLYCINE . "peptide linking" "C6 H10 N3 O2 1" 156.165 HIS . HISTIDINE . "L-peptide linking" "C6 H13 N O2" 131.175 ILE . ISOLEUCINE . "L-peptide linking" "C6 H13 N O2" 131.175 LEU . LEUCINE . "L-peptide linking" "C6 H15 N2 O2 1" 147.198 LYS . LYSINE . "L-peptide linking" "C5 H11 N O2 S" 149.208 MET . METHIONINE . "L-peptide linking" "C9 H11 N O2" 165.192 PHE . PHENYLALANINE . "L-peptide linking" "C5 H9 N O2" 115.132 PRO . PROLINE . "L-peptide linking" "C3 H7 N O3" 105.093 SER . SERINE . "L-peptide linking" "C4 H9 N O3" 119.12 THR . THREONINE . "L-peptide linking" "C11 H12 N2 O2" 204.229 TRP . TRYPTOPHAN . "L-peptide linking" "C9 H11 N O3" 181.191 TYR . TYROSINE . "L-peptide linking" "C5 H11 N O2" 117.148 VAL . VALINE . "L-peptide linking" # _citation.country . _citation.id 1 _citation.journal_abbrev "Nat. Commun." _citation.journal_id_ASTM . _citation.journal_id_CSD . _citation.journal_id_ISSN . _citation.journal_issue . _citation.journal_volume 15 _citation.page_first 7866 _citation.page_last . _citation.pdbx_database_id_DOI 10.1038/s41467-024-51771-2 _citation.pdbx_database_id_PubMed 39251624 _citation.title "Modelling protein complexes with crosslinking mass spectrometry and deep learning" _citation.year 2024 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal 1 "Stahl, K." 1 1 "Warneke, R." 2 1 "Demann, L." 3 1 "Bremenkamp, R." 4 1 "Hormes, B." 5 1 "Brock, O." 6 1 "Stulke, J." 7 1 "Rappsilber, J." 8 # loop_ _entity.details _entity.formula_weight _entity.id _entity.pdbx_description _entity.pdbx_number_of_molecules _entity.src_method _entity.type . 35086.79 1 NADK2_BACSU 1 MAN POLYMER . 50285.812 2 ACKA_BACSU 1 MAN POLYMER # loop_ _entity_poly.entity_id _entity_poly.nstd_chirality _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_sequence_evidence_code _entity_poly.pdbx_strand_id _entity_poly.type 1 . NO NO MTDQRRNVYFFHKQDQETNEQARSLTQLAEEHGFTVVNQHSDANIIASIGGDGTFLQAVRKTNFRDDCLYVGITKKGKAHLYCDFHSDEREKMVDAMTFEQIEVRKYPLIEVTVDQASPFHCLNEVSIRSSIIKTFVMDVLIDDLHFETFRGDGMIISTPTGSTAYNKSVAGAVVDPLLPCMQVSELASLNNNTYRTLGSPFVLSSDRKLTLRVVQDGNEHPIIGLDNEALSTRNVKTIEIKLSNKKIKTVKLKDNSFWEKVKRTFL MTDQRRNVYFFHKQDQETNEQARSLTQLAEEHGFTVVNQHSDANIIASIGGDGTFLQAVRKTNFRDDCLYVGITKKGKAHLYCDFHSDEREKMVDAMTFEQIEVRKYPLIEVTVDQASPFHCLNEVSIRSSIIKTFVMDVLIDDLHFETFRGDGMIISTPTGSTAYNKSVAGAVVDPLLPCMQVSELASLNNNTYRTLGSPFVLSSDRKLTLRVVQDGNEHPIIGLDNEALSTRNVKTIEIKLSNKKIKTVKLKDNSFWEKVKRTFL . A polypeptide(L) 2 . NO NO MSKIIAINAGSSSLKFQLFEMPSETVLTKGLVERIGIADSVFTISVNGEKNTEVTDIPDHAVAVKMLLNKLTEFGIIKDLNEIDGIGHRVVHGGEKFSDSVLLTDETIKEIEDISELAPLHNPANIVGIKAFKEVLPNVPAVAVFDTAFHQTMPEQSYLYSLPYEYYEKFGIRKYGFHGTSHKYVTERAAELLGRPLKDLRLISCHLGNGASIAAVEGGKSIDTSMGFTPLAGVAMGTRSGNIDPALIPYIMEKTGQTADEVLNTLNKKSGLLGISGFSSDLRDIVEATKEGNERAETALEVFASRIHKYIGSYAARMSGVDAIIFTAGIGENSVEVRERVLRGLEFMGVYWDPALNNVRGEEAFISYPHSPVKVMIIPTDEEVMIARDVVRLAK MSKIIAINAGSSSLKFQLFEMPSETVLTKGLVERIGIADSVFTISVNGEKNTEVTDIPDHAVAVKMLLNKLTEFGIIKDLNEIDGIGHRVVHGGEKFSDSVLLTDETIKEIEDISELAPLHNPANIVGIKAFKEVLPNVPAVAVFDTAFHQTMPEQSYLYSLPYEYYEKFGIRKYGFHGTSHKYVTERAAELLGRPLKDLRLISCHLGNGASIAAVEGGKSIDTSMGFTPLAGVAMGTRSGNIDPALIPYIMEKTGQTADEVLNTLNKKSGLLGISGFSSDLRDIVEATKEGNERAETALEVFASRIHKYIGSYAARMSGVDAIIFTAGIGENSVEVRERVLRGLEFMGVYWDPALNNVRGEEAFISYPHSPVKVMIIPTDEEVMIARDVVRLAK . B polypeptide(L) # loop_ _entity_poly_seq.entity_id _entity_poly_seq.hetero _entity_poly_seq.mon_id _entity_poly_seq.num 1 . MET 1 1 . THR 2 1 . ASP 3 1 . GLN 4 1 . ARG 5 1 . ARG 6 1 . ASN 7 1 . VAL 8 1 . TYR 9 1 . PHE 10 1 . PHE 11 1 . HIS 12 1 . LYS 13 1 . GLN 14 1 . ASP 15 1 . GLN 16 1 . GLU 17 1 . THR 18 1 . ASN 19 1 . GLU 20 1 . GLN 21 1 . ALA 22 1 . ARG 23 1 . SER 24 1 . LEU 25 1 . THR 26 1 . GLN 27 1 . LEU 28 1 . ALA 29 1 . GLU 30 1 . GLU 31 1 . HIS 32 1 . GLY 33 1 . PHE 34 1 . THR 35 1 . VAL 36 1 . VAL 37 1 . ASN 38 1 . GLN 39 1 . HIS 40 1 . SER 41 1 . ASP 42 1 . ALA 43 1 . ASN 44 1 . ILE 45 1 . ILE 46 1 . ALA 47 1 . SER 48 1 . ILE 49 1 . GLY 50 1 . GLY 51 1 . ASP 52 1 . GLY 53 1 . THR 54 1 . PHE 55 1 . LEU 56 1 . GLN 57 1 . ALA 58 1 . VAL 59 1 . ARG 60 1 . LYS 61 1 . THR 62 1 . ASN 63 1 . PHE 64 1 . ARG 65 1 . ASP 66 1 . ASP 67 1 . CYS 68 1 . LEU 69 1 . TYR 70 1 . VAL 71 1 . GLY 72 1 . ILE 73 1 . THR 74 1 . LYS 75 1 . LYS 76 1 . GLY 77 1 . LYS 78 1 . ALA 79 1 . HIS 80 1 . LEU 81 1 . TYR 82 1 . CYS 83 1 . ASP 84 1 . PHE 85 1 . HIS 86 1 . SER 87 1 . ASP 88 1 . GLU 89 1 . ARG 90 1 . GLU 91 1 . LYS 92 1 . MET 93 1 . VAL 94 1 . ASP 95 1 . ALA 96 1 . MET 97 1 . THR 98 1 . PHE 99 1 . GLU 100 1 . GLN 101 1 . ILE 102 1 . GLU 103 1 . VAL 104 1 . ARG 105 1 . LYS 106 1 . TYR 107 1 . PRO 108 1 . LEU 109 1 . ILE 110 1 . GLU 111 1 . VAL 112 1 . THR 113 1 . VAL 114 1 . ASP 115 1 . GLN 116 1 . ALA 117 1 . SER 118 1 . PRO 119 1 . PHE 120 1 . HIS 121 1 . CYS 122 1 . LEU 123 1 . ASN 124 1 . GLU 125 1 . VAL 126 1 . SER 127 1 . ILE 128 1 . ARG 129 1 . SER 130 1 . SER 131 1 . ILE 132 1 . ILE 133 1 . LYS 134 1 . THR 135 1 . PHE 136 1 . VAL 137 1 . MET 138 1 . ASP 139 1 . VAL 140 1 . LEU 141 1 . ILE 142 1 . ASP 143 1 . ASP 144 1 . LEU 145 1 . HIS 146 1 . PHE 147 1 . GLU 148 1 . THR 149 1 . PHE 150 1 . ARG 151 1 . GLY 152 1 . ASP 153 1 . GLY 154 1 . MET 155 1 . ILE 156 1 . ILE 157 1 . SER 158 1 . THR 159 1 . PRO 160 1 . THR 161 1 . GLY 162 1 . SER 163 1 . THR 164 1 . ALA 165 1 . TYR 166 1 . ASN 167 1 . LYS 168 1 . SER 169 1 . VAL 170 1 . ALA 171 1 . GLY 172 1 . ALA 173 1 . VAL 174 1 . VAL 175 1 . ASP 176 1 . PRO 177 1 . LEU 178 1 . LEU 179 1 . PRO 180 1 . CYS 181 1 . MET 182 1 . GLN 183 1 . VAL 184 1 . SER 185 1 . GLU 186 1 . LEU 187 1 . ALA 188 1 . SER 189 1 . LEU 190 1 . ASN 191 1 . ASN 192 1 . ASN 193 1 . THR 194 1 . TYR 195 1 . ARG 196 1 . THR 197 1 . LEU 198 1 . GLY 199 1 . SER 200 1 . PRO 201 1 . PHE 202 1 . VAL 203 1 . LEU 204 1 . SER 205 1 . SER 206 1 . ASP 207 1 . ARG 208 1 . LYS 209 1 . LEU 210 1 . THR 211 1 . LEU 212 1 . ARG 213 1 . VAL 214 1 . VAL 215 1 . GLN 216 1 . ASP 217 1 . GLY 218 1 . ASN 219 1 . GLU 220 1 . HIS 221 1 . PRO 222 1 . ILE 223 1 . ILE 224 1 . GLY 225 1 . LEU 226 1 . ASP 227 1 . ASN 228 1 . GLU 229 1 . ALA 230 1 . LEU 231 1 . SER 232 1 . THR 233 1 . ARG 234 1 . ASN 235 1 . VAL 236 1 . LYS 237 1 . THR 238 1 . ILE 239 1 . GLU 240 1 . ILE 241 1 . LYS 242 1 . LEU 243 1 . SER 244 1 . ASN 245 1 . LYS 246 1 . LYS 247 1 . ILE 248 1 . LYS 249 1 . THR 250 1 . VAL 251 1 . LYS 252 1 . LEU 253 1 . LYS 254 1 . ASP 255 1 . ASN 256 1 . SER 257 1 . PHE 258 1 . TRP 259 1 . GLU 260 1 . LYS 261 1 . VAL 262 1 . LYS 263 1 . ARG 264 1 . THR 265 1 . PHE 266 1 . LEU 267 2 . MET 1 2 . SER 2 2 . LYS 3 2 . ILE 4 2 . ILE 5 2 . ALA 6 2 . ILE 7 2 . ASN 8 2 . ALA 9 2 . GLY 10 2 . SER 11 2 . SER 12 2 . SER 13 2 . LEU 14 2 . LYS 15 2 . PHE 16 2 . GLN 17 2 . LEU 18 2 . PHE 19 2 . GLU 20 2 . MET 21 2 . PRO 22 2 . SER 23 2 . GLU 24 2 . THR 25 2 . VAL 26 2 . LEU 27 2 . THR 28 2 . LYS 29 2 . GLY 30 2 . LEU 31 2 . VAL 32 2 . GLU 33 2 . ARG 34 2 . ILE 35 2 . GLY 36 2 . ILE 37 2 . ALA 38 2 . ASP 39 2 . SER 40 2 . VAL 41 2 . PHE 42 2 . THR 43 2 . ILE 44 2 . SER 45 2 . VAL 46 2 . ASN 47 2 . GLY 48 2 . GLU 49 2 . LYS 50 2 . ASN 51 2 . THR 52 2 . GLU 53 2 . VAL 54 2 . THR 55 2 . ASP 56 2 . ILE 57 2 . PRO 58 2 . ASP 59 2 . HIS 60 2 . ALA 61 2 . VAL 62 2 . ALA 63 2 . VAL 64 2 . LYS 65 2 . MET 66 2 . LEU 67 2 . LEU 68 2 . ASN 69 2 . LYS 70 2 . LEU 71 2 . THR 72 2 . GLU 73 2 . PHE 74 2 . GLY 75 2 . ILE 76 2 . ILE 77 2 . LYS 78 2 . ASP 79 2 . LEU 80 2 . ASN 81 2 . GLU 82 2 . ILE 83 2 . ASP 84 2 . GLY 85 2 . ILE 86 2 . GLY 87 2 . HIS 88 2 . ARG 89 2 . VAL 90 2 . VAL 91 2 . HIS 92 2 . GLY 93 2 . GLY 94 2 . GLU 95 2 . LYS 96 2 . PHE 97 2 . SER 98 2 . ASP 99 2 . SER 100 2 . VAL 101 2 . LEU 102 2 . LEU 103 2 . THR 104 2 . ASP 105 2 . GLU 106 2 . THR 107 2 . ILE 108 2 . LYS 109 2 . GLU 110 2 . ILE 111 2 . GLU 112 2 . ASP 113 2 . ILE 114 2 . SER 115 2 . GLU 116 2 . LEU 117 2 . ALA 118 2 . PRO 119 2 . LEU 120 2 . HIS 121 2 . ASN 122 2 . PRO 123 2 . ALA 124 2 . ASN 125 2 . ILE 126 2 . VAL 127 2 . GLY 128 2 . ILE 129 2 . LYS 130 2 . ALA 131 2 . PHE 132 2 . LYS 133 2 . GLU 134 2 . VAL 135 2 . LEU 136 2 . PRO 137 2 . ASN 138 2 . VAL 139 2 . PRO 140 2 . ALA 141 2 . VAL 142 2 . ALA 143 2 . VAL 144 2 . PHE 145 2 . ASP 146 2 . THR 147 2 . ALA 148 2 . PHE 149 2 . HIS 150 2 . GLN 151 2 . THR 152 2 . MET 153 2 . PRO 154 2 . GLU 155 2 . GLN 156 2 . SER 157 2 . TYR 158 2 . LEU 159 2 . TYR 160 2 . SER 161 2 . LEU 162 2 . PRO 163 2 . TYR 164 2 . GLU 165 2 . TYR 166 2 . TYR 167 2 . GLU 168 2 . LYS 169 2 . PHE 170 2 . GLY 171 2 . ILE 172 2 . ARG 173 2 . LYS 174 2 . TYR 175 2 . GLY 176 2 . PHE 177 2 . HIS 178 2 . GLY 179 2 . THR 180 2 . SER 181 2 . HIS 182 2 . LYS 183 2 . TYR 184 2 . VAL 185 2 . THR 186 2 . GLU 187 2 . ARG 188 2 . ALA 189 2 . ALA 190 2 . GLU 191 2 . LEU 192 2 . LEU 193 2 . GLY 194 2 . ARG 195 2 . PRO 196 2 . LEU 197 2 . LYS 198 2 . ASP 199 2 . LEU 200 2 . ARG 201 2 . LEU 202 2 . ILE 203 2 . SER 204 2 . CYS 205 2 . HIS 206 2 . LEU 207 2 . GLY 208 2 . ASN 209 2 . GLY 210 2 . ALA 211 2 . SER 212 2 . ILE 213 2 . ALA 214 2 . ALA 215 2 . VAL 216 2 . GLU 217 2 . GLY 218 2 . GLY 219 2 . LYS 220 2 . SER 221 2 . ILE 222 2 . ASP 223 2 . THR 224 2 . SER 225 2 . MET 226 2 . GLY 227 2 . PHE 228 2 . THR 229 2 . PRO 230 2 . LEU 231 2 . ALA 232 2 . GLY 233 2 . VAL 234 2 . ALA 235 2 . MET 236 2 . GLY 237 2 . THR 238 2 . ARG 239 2 . SER 240 2 . GLY 241 2 . ASN 242 2 . ILE 243 2 . ASP 244 2 . PRO 245 2 . ALA 246 2 . LEU 247 2 . ILE 248 2 . PRO 249 2 . TYR 250 2 . ILE 251 2 . MET 252 2 . GLU 253 2 . LYS 254 2 . THR 255 2 . GLY 256 2 . GLN 257 2 . THR 258 2 . ALA 259 2 . ASP 260 2 . GLU 261 2 . VAL 262 2 . LEU 263 2 . ASN 264 2 . THR 265 2 . LEU 266 2 . ASN 267 2 . LYS 268 2 . LYS 269 2 . SER 270 2 . GLY 271 2 . LEU 272 2 . LEU 273 2 . GLY 274 2 . ILE 275 2 . SER 276 2 . GLY 277 2 . PHE 278 2 . SER 279 2 . SER 280 2 . ASP 281 2 . LEU 282 2 . ARG 283 2 . ASP 284 2 . ILE 285 2 . VAL 286 2 . GLU 287 2 . ALA 288 2 . THR 289 2 . LYS 290 2 . GLU 291 2 . GLY 292 2 . ASN 293 2 . GLU 294 2 . ARG 295 2 . ALA 296 2 . GLU 297 2 . THR 298 2 . ALA 299 2 . LEU 300 2 . GLU 301 2 . VAL 302 2 . PHE 303 2 . ALA 304 2 . SER 305 2 . ARG 306 2 . ILE 307 2 . HIS 308 2 . LYS 309 2 . TYR 310 2 . ILE 311 2 . GLY 312 2 . SER 313 2 . TYR 314 2 . ALA 315 2 . ALA 316 2 . ARG 317 2 . MET 318 2 . SER 319 2 . GLY 320 2 . VAL 321 2 . ASP 322 2 . ALA 323 2 . ILE 324 2 . ILE 325 2 . PHE 326 2 . THR 327 2 . ALA 328 2 . GLY 329 2 . ILE 330 2 . GLY 331 2 . GLU 332 2 . ASN 333 2 . SER 334 2 . VAL 335 2 . GLU 336 2 . VAL 337 2 . ARG 338 2 . GLU 339 2 . ARG 340 2 . VAL 341 2 . LEU 342 2 . ARG 343 2 . GLY 344 2 . LEU 345 2 . GLU 346 2 . PHE 347 2 . MET 348 2 . GLY 349 2 . VAL 350 2 . TYR 351 2 . TRP 352 2 . ASP 353 2 . PRO 354 2 . ALA 355 2 . LEU 356 2 . ASN 357 2 . ASN 358 2 . VAL 359 2 . ARG 360 2 . GLY 361 2 . GLU 362 2 . GLU 363 2 . ALA 364 2 . PHE 365 2 . ILE 366 2 . SER 367 2 . TYR 368 2 . PRO 369 2 . HIS 370 2 . SER 371 2 . PRO 372 2 . VAL 373 2 . LYS 374 2 . VAL 375 2 . MET 376 2 . ILE 377 2 . ILE 378 2 . PRO 379 2 . THR 380 2 . ASP 381 2 . GLU 382 2 . GLU 383 2 . VAL 384 2 . MET 385 2 . ILE 386 2 . ALA 387 2 . ARG 388 2 . ASP 389 2 . VAL 390 2 . VAL 391 2 . ARG 392 2 . LEU 393 2 . ALA 394 2 . LYS 395 # _ihm_chemical_component_descriptor.auth_name SDA _ihm_chemical_component_descriptor.chemical_name "succinimidyl 4,4'-azipentanoate" _ihm_chemical_component_descriptor.common_name . _ihm_chemical_component_descriptor.details . _ihm_chemical_component_descriptor.id 1 _ihm_chemical_component_descriptor.inchi 1S/C9H11N3O4/c1-9(10-11-9)5-4-8(15)16-12-6(13)2-3-7(12)14/h2-5H2,1H3 _ihm_chemical_component_descriptor.inchi_key " SYYLQNPWAPHRFV-UHFFFAOYSA-N" _ihm_chemical_component_descriptor.smiles CC1(N=N1)CCC(ON2C(CCC2=O)=O)=O _ihm_chemical_component_descriptor.smiles_canonical . # _ihm_cross_link_list.comp_id_1 LYS _ihm_cross_link_list.comp_id_2 LYS _ihm_cross_link_list.dataset_list_id 1 _ihm_cross_link_list.details . _ihm_cross_link_list.entity_description_1 NADK2_BACSU _ihm_cross_link_list.entity_description_2 ACKA_BACSU _ihm_cross_link_list.entity_id_1 1 _ihm_cross_link_list.entity_id_2 2 _ihm_cross_link_list.group_id 1 _ihm_cross_link_list.id 1 _ihm_cross_link_list.linker_chem_comp_descriptor_id 1 _ihm_cross_link_list.linker_type SDA _ihm_cross_link_list.seq_id_1 237 _ihm_cross_link_list.seq_id_2 198 # _ihm_cross_link_restraint.asym_id_1 A _ihm_cross_link_restraint.asym_id_2 B _ihm_cross_link_restraint.atom_id_1 . _ihm_cross_link_restraint.atom_id_2 . _ihm_cross_link_restraint.comp_id_1 LYS _ihm_cross_link_restraint.comp_id_2 LYS _ihm_cross_link_restraint.conditional_crosslink_flag . _ihm_cross_link_restraint.distance_threshold 25 _ihm_cross_link_restraint.entity_id_1 1 _ihm_cross_link_restraint.entity_id_2 2 _ihm_cross_link_restraint.group_id 1 _ihm_cross_link_restraint.id 1 _ihm_cross_link_restraint.model_granularity by-residue _ihm_cross_link_restraint.pseudo_site_flag NO _ihm_cross_link_restraint.psi 0.95 _ihm_cross_link_restraint.restraint_type "upper bound" _ihm_cross_link_restraint.seq_id_1 237 _ihm_cross_link_restraint.seq_id_2 198 _ihm_cross_link_restraint.sigma_1 . _ihm_cross_link_restraint.sigma_2 . # _ihm_dataset_group.application . _ihm_dataset_group.details . _ihm_dataset_group.id 1 _ihm_dataset_group.name . # _ihm_dataset_group_link.dataset_list_id 1 _ihm_dataset_group_link.group_id 1 # _ihm_dataset_list.data_type "Crosslinking-MS data" _ihm_dataset_list.database_hosted YES _ihm_dataset_list.details . _ihm_dataset_list.id 1 # _ihm_dataset_related_db_reference.accession_code PXD035508 _ihm_dataset_related_db_reference.dataset_list_id 1 _ihm_dataset_related_db_reference.db_name PRIDE _ihm_dataset_related_db_reference.details . _ihm_dataset_related_db_reference.id 1 _ihm_dataset_related_db_reference.version . # loop_ _ihm_entity_poly_segment.comp_id_begin _ihm_entity_poly_segment.comp_id_end _ihm_entity_poly_segment.entity_id _ihm_entity_poly_segment.id _ihm_entity_poly_segment.seq_id_begin _ihm_entity_poly_segment.seq_id_end MET LEU 1 1 1 267 MET LYS 2 2 1 395 # _ihm_model_group.details . _ihm_model_group.id 1 _ihm_model_group.name . # _ihm_model_group_link.group_id 1 _ihm_model_group_link.model_id 1 # _ihm_model_list.assembly_id 1 _ihm_model_list.model_id 1 _ihm_model_list.model_name . _ihm_model_list.protocol_id 1 _ihm_model_list.representation_id 1 # _ihm_model_representation.details . _ihm_model_representation.id 1 _ihm_model_representation.name . # loop_ _ihm_model_representation_details.description _ihm_model_representation_details.entity_asym_id _ihm_model_representation_details.entity_description _ihm_model_representation_details.entity_id _ihm_model_representation_details.entity_poly_segment_id _ihm_model_representation_details.id _ihm_model_representation_details.model_granularity _ihm_model_representation_details.model_mode _ihm_model_representation_details.model_object_count _ihm_model_representation_details.model_object_primitive _ihm_model_representation_details.representation_id _ihm_model_representation_details.starting_model_id . A NADK2_BACSU 1 1 1 by-atom flexible . atomistic 1 . . B ACKA_BACSU 2 2 2 by-atom flexible . atomistic 1 . # _ihm_modeling_protocol.details . _ihm_modeling_protocol.id 1 _ihm_modeling_protocol.num_steps 1 _ihm_modeling_protocol.protocol_name AlphaLink2 # _ihm_modeling_protocol_details.dataset_group_id 1 _ihm_modeling_protocol_details.description . _ihm_modeling_protocol_details.ensemble_flag NO _ihm_modeling_protocol_details.id 1 _ihm_modeling_protocol_details.multi_scale_flag NO _ihm_modeling_protocol_details.multi_state_flag NO _ihm_modeling_protocol_details.num_models_begin 0 _ihm_modeling_protocol_details.num_models_end 1 _ihm_modeling_protocol_details.ordered_flag NO _ihm_modeling_protocol_details.protocol_id 1 _ihm_modeling_protocol_details.script_file_id . _ihm_modeling_protocol_details.software_id 1 _ihm_modeling_protocol_details.step_id 1 _ihm_modeling_protocol_details.step_method AlphaLink2 _ihm_modeling_protocol_details.step_name AlphaLink2 _ihm_modeling_protocol_details.struct_assembly_description . _ihm_modeling_protocol_details.struct_assembly_id 1 # _ihm_struct_assembly.description "Integrative model of NADK2-ACKA by crosslinking MS and deep learning" _ihm_struct_assembly.id 1 _ihm_struct_assembly.name NADK2-ACKA # loop_ _ihm_struct_assembly_details.assembly_id _ihm_struct_assembly_details.asym_id _ihm_struct_assembly_details.entity_description _ihm_struct_assembly_details.entity_id _ihm_struct_assembly_details.entity_poly_segment_id _ihm_struct_assembly_details.id _ihm_struct_assembly_details.parent_assembly_id 1 A NADK2_BACSU 1 1 1 1 1 B ACKA_BACSU 2 2 2 1 # _software.citation_id 1 _software.classification "model building" _software.description "Modelling protein complexes with crosslinking mass spectrometry and deep learning" _software.location https://github.com/Rappsilber-Laboratory/AlphaLink2 _software.name AlphaLink2 _software.pdbx_ordinal 1 _software.type program _software.version 1.0 # _struct.entry_id 9A7W _struct.pdbx_CASP_flag . _struct.pdbx_descriptor . _struct.pdbx_details . _struct.pdbx_model_details . _struct.pdbx_model_type_details . _struct.pdbx_structure_determination_methodology integrative _struct.title "Integrative model of NADK2-ACKA by crosslinking MS and deep learning" # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_PDB_id _struct_asym.pdbx_alt_id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.pdbx_order _struct_asym.pdbx_type NADK2_BACSU 1 A . . . . . . ACKA_BACSU 2 B . . . . . . # loop_ _struct_ref.db_code _struct_ref.db_name _struct_ref.details _struct_ref.entity_id _struct_ref.id _struct_ref.pdbx_align_begin _struct_ref.pdbx_align_end _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.pdbx_seq_one_letter_code A UNP . 1 1 1 . O34934 . MTDQRRNVYFFHKQDQETNEQARSLTQLAEEHGFTVVNQHSDANIIASIGGDGTFLQAVRKTNFRDDCLYVGITKKGKAHLYCDFHSDEREKMVDAMTFEQIEVRKYPLIEVTVDQASPFHCLNEVSIRSSIIKTFVMDVLIDDLHFETFRGDGMIISTPTGSTAYNKSVAGAVVDPLLPCMQVSELASLNNNTYRTLGSPFVLSSDRKLTLRVVQDGNEHPIIGLDNEALSTRNVKTIEIKLSNKKIKTVKLKDNSFWEKVKRTFL B UNP . 2 2 1 . P37877 . MSKIIAINAGSSSLKFQLFEMPSETVLTKGLVERIGIADSVFTISVNGEKNTEVTDIPDHAVAVKMLLNKLTEFGIIKDLNEIDGIGHRVVHGGEKFSDSVLLTDETIKEIEDISELAPLHNPANIVGIKAFKEVLPNVPAVAVFDTAFHQTMPEQSYLYSLPYEYYEKFGIRKYGFHGTSHKYVTERAAELLGRPLKDLRLISCHLGNGASIAAVEGGKSIDTSMGFTPLAGVAMGTRSGNIDPALIPYIMEKTGQTADEVLNTLNKKSGLLGISGFSSDLRDIVEATKEGNERAETALEVFASRIHKYIGSYAARMSGVDAIIFTAGIGENSVEVRERVLRGLEFMGVYWDPALNNVRGEEAFISYPHSPVKVMIIPTDEEVMIARDVVRLAK # loop_ _struct_ref_seq.align_id _struct_ref_seq.db_align_beg _struct_ref_seq.db_align_end _struct_ref_seq.ref_id _struct_ref_seq.seq_align_beg _struct_ref_seq.seq_align_end 1 1 267 1 1 267 2 1 395 2 1 395 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code A 1 1 MET 1 1 MET MET A . A 1 2 THR 2 2 THR THR A . A 1 3 ASP 3 3 ASP ASP A . A 1 4 GLN 4 4 GLN GLN A . A 1 5 ARG 5 5 ARG ARG A . A 1 6 ARG 6 6 ARG ARG A . A 1 7 ASN 7 7 ASN ASN A . A 1 8 VAL 8 8 VAL VAL A . A 1 9 TYR 9 9 TYR TYR A . A 1 10 PHE 10 10 PHE PHE A . A 1 11 PHE 11 11 PHE PHE A . A 1 12 HIS 12 12 HIS HIS A . A 1 13 LYS 13 13 LYS LYS A . A 1 14 GLN 14 14 GLN GLN A . A 1 15 ASP 15 15 ASP ASP A . A 1 16 GLN 16 16 GLN GLN A . A 1 17 GLU 17 17 GLU GLU A . A 1 18 THR 18 18 THR THR A . A 1 19 ASN 19 19 ASN ASN A . A 1 20 GLU 20 20 GLU GLU A . A 1 21 GLN 21 21 GLN GLN A . A 1 22 ALA 22 22 ALA ALA A . A 1 23 ARG 23 23 ARG ARG A . A 1 24 SER 24 24 SER SER A . A 1 25 LEU 25 25 LEU LEU A . A 1 26 THR 26 26 THR THR A . A 1 27 GLN 27 27 GLN GLN A . A 1 28 LEU 28 28 LEU LEU A . A 1 29 ALA 29 29 ALA ALA A . A 1 30 GLU 30 30 GLU GLU A . A 1 31 GLU 31 31 GLU GLU A . A 1 32 HIS 32 32 HIS HIS A . A 1 33 GLY 33 33 GLY GLY A . A 1 34 PHE 34 34 PHE PHE A . A 1 35 THR 35 35 THR THR A . A 1 36 VAL 36 36 VAL VAL A . A 1 37 VAL 37 37 VAL VAL A . A 1 38 ASN 38 38 ASN ASN A . A 1 39 GLN 39 39 GLN GLN A . A 1 40 HIS 40 40 HIS HIS A . A 1 41 SER 41 41 SER SER A . A 1 42 ASP 42 42 ASP ASP A . A 1 43 ALA 43 43 ALA ALA A . A 1 44 ASN 44 44 ASN ASN A . A 1 45 ILE 45 45 ILE ILE A . A 1 46 ILE 46 46 ILE ILE A . A 1 47 ALA 47 47 ALA ALA A . A 1 48 SER 48 48 SER SER A . A 1 49 ILE 49 49 ILE ILE A . A 1 50 GLY 50 50 GLY GLY A . A 1 51 GLY 51 51 GLY GLY A . A 1 52 ASP 52 52 ASP ASP A . A 1 53 GLY 53 53 GLY GLY A . A 1 54 THR 54 54 THR THR A . A 1 55 PHE 55 55 PHE PHE A . A 1 56 LEU 56 56 LEU LEU A . A 1 57 GLN 57 57 GLN GLN A . A 1 58 ALA 58 58 ALA ALA A . A 1 59 VAL 59 59 VAL VAL A . A 1 60 ARG 60 60 ARG ARG A . A 1 61 LYS 61 61 LYS LYS A . A 1 62 THR 62 62 THR THR A . A 1 63 ASN 63 63 ASN ASN A . A 1 64 PHE 64 64 PHE PHE A . A 1 65 ARG 65 65 ARG ARG A . A 1 66 ASP 66 66 ASP ASP A . A 1 67 ASP 67 67 ASP ASP A . A 1 68 CYS 68 68 CYS CYS A . A 1 69 LEU 69 69 LEU LEU A . A 1 70 TYR 70 70 TYR TYR A . A 1 71 VAL 71 71 VAL VAL A . A 1 72 GLY 72 72 GLY GLY A . A 1 73 ILE 73 73 ILE ILE A . A 1 74 THR 74 74 THR THR A . A 1 75 LYS 75 75 LYS LYS A . A 1 76 LYS 76 76 LYS LYS A . A 1 77 GLY 77 77 GLY GLY A . A 1 78 LYS 78 78 LYS LYS A . A 1 79 ALA 79 79 ALA ALA A . A 1 80 HIS 80 80 HIS HIS A . A 1 81 LEU 81 81 LEU LEU A . A 1 82 TYR 82 82 TYR TYR A . A 1 83 CYS 83 83 CYS CYS A . A 1 84 ASP 84 84 ASP ASP A . A 1 85 PHE 85 85 PHE PHE A . A 1 86 HIS 86 86 HIS HIS A . A 1 87 SER 87 87 SER SER A . A 1 88 ASP 88 88 ASP ASP A . A 1 89 GLU 89 89 GLU GLU A . A 1 90 ARG 90 90 ARG ARG A . A 1 91 GLU 91 91 GLU GLU A . A 1 92 LYS 92 92 LYS LYS A . A 1 93 MET 93 93 MET MET A . A 1 94 VAL 94 94 VAL VAL A . A 1 95 ASP 95 95 ASP ASP A . A 1 96 ALA 96 96 ALA ALA A . A 1 97 MET 97 97 MET MET A . A 1 98 THR 98 98 THR THR A . A 1 99 PHE 99 99 PHE PHE A . A 1 100 GLU 100 100 GLU GLU A . A 1 101 GLN 101 101 GLN GLN A . A 1 102 ILE 102 102 ILE ILE A . A 1 103 GLU 103 103 GLU GLU A . A 1 104 VAL 104 104 VAL VAL A . A 1 105 ARG 105 105 ARG ARG A . A 1 106 LYS 106 106 LYS LYS A . A 1 107 TYR 107 107 TYR TYR A . A 1 108 PRO 108 108 PRO PRO A . A 1 109 LEU 109 109 LEU LEU A . A 1 110 ILE 110 110 ILE ILE A . A 1 111 GLU 111 111 GLU GLU A . A 1 112 VAL 112 112 VAL VAL A . A 1 113 THR 113 113 THR THR A . A 1 114 VAL 114 114 VAL VAL A . A 1 115 ASP 115 115 ASP ASP A . A 1 116 GLN 116 116 GLN GLN A . A 1 117 ALA 117 117 ALA ALA A . A 1 118 SER 118 118 SER SER A . A 1 119 PRO 119 119 PRO PRO A . A 1 120 PHE 120 120 PHE PHE A . A 1 121 HIS 121 121 HIS HIS A . A 1 122 CYS 122 122 CYS CYS A . A 1 123 LEU 123 123 LEU LEU A . A 1 124 ASN 124 124 ASN ASN A . A 1 125 GLU 125 125 GLU GLU A . A 1 126 VAL 126 126 VAL VAL A . A 1 127 SER 127 127 SER SER A . A 1 128 ILE 128 128 ILE ILE A . A 1 129 ARG 129 129 ARG ARG A . A 1 130 SER 130 130 SER SER A . A 1 131 SER 131 131 SER SER A . A 1 132 ILE 132 132 ILE ILE A . A 1 133 ILE 133 133 ILE ILE A . A 1 134 LYS 134 134 LYS LYS A . A 1 135 THR 135 135 THR THR A . A 1 136 PHE 136 136 PHE PHE A . A 1 137 VAL 137 137 VAL VAL A . A 1 138 MET 138 138 MET MET A . A 1 139 ASP 139 139 ASP ASP A . A 1 140 VAL 140 140 VAL VAL A . A 1 141 LEU 141 141 LEU LEU A . A 1 142 ILE 142 142 ILE ILE A . A 1 143 ASP 143 143 ASP ASP A . A 1 144 ASP 144 144 ASP ASP A . A 1 145 LEU 145 145 LEU LEU A . A 1 146 HIS 146 146 HIS HIS A . A 1 147 PHE 147 147 PHE PHE A . A 1 148 GLU 148 148 GLU GLU A . A 1 149 THR 149 149 THR THR A . A 1 150 PHE 150 150 PHE PHE A . A 1 151 ARG 151 151 ARG ARG A . A 1 152 GLY 152 152 GLY GLY A . A 1 153 ASP 153 153 ASP ASP A . A 1 154 GLY 154 154 GLY GLY A . A 1 155 MET 155 155 MET MET A . A 1 156 ILE 156 156 ILE ILE A . A 1 157 ILE 157 157 ILE ILE A . A 1 158 SER 158 158 SER SER A . A 1 159 THR 159 159 THR THR A . A 1 160 PRO 160 160 PRO PRO A . A 1 161 THR 161 161 THR THR A . A 1 162 GLY 162 162 GLY GLY A . A 1 163 SER 163 163 SER SER A . A 1 164 THR 164 164 THR THR A . A 1 165 ALA 165 165 ALA ALA A . A 1 166 TYR 166 166 TYR TYR A . A 1 167 ASN 167 167 ASN ASN A . A 1 168 LYS 168 168 LYS LYS A . A 1 169 SER 169 169 SER SER A . A 1 170 VAL 170 170 VAL VAL A . A 1 171 ALA 171 171 ALA ALA A . A 1 172 GLY 172 172 GLY GLY A . A 1 173 ALA 173 173 ALA ALA A . A 1 174 VAL 174 174 VAL VAL A . A 1 175 VAL 175 175 VAL VAL A . A 1 176 ASP 176 176 ASP ASP A . A 1 177 PRO 177 177 PRO PRO A . A 1 178 LEU 178 178 LEU LEU A . A 1 179 LEU 179 179 LEU LEU A . A 1 180 PRO 180 180 PRO PRO A . A 1 181 CYS 181 181 CYS CYS A . A 1 182 MET 182 182 MET MET A . A 1 183 GLN 183 183 GLN GLN A . A 1 184 VAL 184 184 VAL VAL A . A 1 185 SER 185 185 SER SER A . A 1 186 GLU 186 186 GLU GLU A . A 1 187 LEU 187 187 LEU LEU A . A 1 188 ALA 188 188 ALA ALA A . A 1 189 SER 189 189 SER SER A . A 1 190 LEU 190 190 LEU LEU A . A 1 191 ASN 191 191 ASN ASN A . A 1 192 ASN 192 192 ASN ASN A . A 1 193 ASN 193 193 ASN ASN A . A 1 194 THR 194 194 THR THR A . A 1 195 TYR 195 195 TYR TYR A . A 1 196 ARG 196 196 ARG ARG A . A 1 197 THR 197 197 THR THR A . A 1 198 LEU 198 198 LEU LEU A . A 1 199 GLY 199 199 GLY GLY A . A 1 200 SER 200 200 SER SER A . A 1 201 PRO 201 201 PRO PRO A . A 1 202 PHE 202 202 PHE PHE A . A 1 203 VAL 203 203 VAL VAL A . A 1 204 LEU 204 204 LEU LEU A . A 1 205 SER 205 205 SER SER A . A 1 206 SER 206 206 SER SER A . A 1 207 ASP 207 207 ASP ASP A . A 1 208 ARG 208 208 ARG ARG A . A 1 209 LYS 209 209 LYS LYS A . A 1 210 LEU 210 210 LEU LEU A . A 1 211 THR 211 211 THR THR A . A 1 212 LEU 212 212 LEU LEU A . A 1 213 ARG 213 213 ARG ARG A . A 1 214 VAL 214 214 VAL VAL A . A 1 215 VAL 215 215 VAL VAL A . A 1 216 GLN 216 216 GLN GLN A . A 1 217 ASP 217 217 ASP ASP A . A 1 218 GLY 218 218 GLY GLY A . A 1 219 ASN 219 219 ASN ASN A . A 1 220 GLU 220 220 GLU GLU A . A 1 221 HIS 221 221 HIS HIS A . A 1 222 PRO 222 222 PRO PRO A . A 1 223 ILE 223 223 ILE ILE A . A 1 224 ILE 224 224 ILE ILE A . A 1 225 GLY 225 225 GLY GLY A . A 1 226 LEU 226 226 LEU LEU A . A 1 227 ASP 227 227 ASP ASP A . A 1 228 ASN 228 228 ASN ASN A . A 1 229 GLU 229 229 GLU GLU A . A 1 230 ALA 230 230 ALA ALA A . A 1 231 LEU 231 231 LEU LEU A . A 1 232 SER 232 232 SER SER A . A 1 233 THR 233 233 THR THR A . A 1 234 ARG 234 234 ARG ARG A . A 1 235 ASN 235 235 ASN ASN A . A 1 236 VAL 236 236 VAL VAL A . A 1 237 LYS 237 237 LYS LYS A . A 1 238 THR 238 238 THR THR A . A 1 239 ILE 239 239 ILE ILE A . A 1 240 GLU 240 240 GLU GLU A . A 1 241 ILE 241 241 ILE ILE A . A 1 242 LYS 242 242 LYS LYS A . A 1 243 LEU 243 243 LEU LEU A . A 1 244 SER 244 244 SER SER A . A 1 245 ASN 245 245 ASN ASN A . A 1 246 LYS 246 246 LYS LYS A . A 1 247 LYS 247 247 LYS LYS A . A 1 248 ILE 248 248 ILE ILE A . A 1 249 LYS 249 249 LYS LYS A . A 1 250 THR 250 250 THR THR A . A 1 251 VAL 251 251 VAL VAL A . A 1 252 LYS 252 252 LYS LYS A . A 1 253 LEU 253 253 LEU LEU A . A 1 254 LYS 254 254 LYS LYS A . A 1 255 ASP 255 255 ASP ASP A . A 1 256 ASN 256 256 ASN ASN A . A 1 257 SER 257 257 SER SER A . A 1 258 PHE 258 258 PHE PHE A . A 1 259 TRP 259 259 TRP TRP A . A 1 260 GLU 260 260 GLU GLU A . A 1 261 LYS 261 261 LYS LYS A . A 1 262 VAL 262 262 VAL VAL A . A 1 263 LYS 263 263 LYS LYS A . A 1 264 ARG 264 264 ARG ARG A . A 1 265 THR 265 265 THR THR A . A 1 266 PHE 266 266 PHE PHE A . A 1 267 LEU 267 267 LEU LEU A . B 2 1 MET 1 1 MET MET B . B 2 2 SER 2 2 SER SER B . B 2 3 LYS 3 3 LYS LYS B . B 2 4 ILE 4 4 ILE ILE B . B 2 5 ILE 5 5 ILE ILE B . B 2 6 ALA 6 6 ALA ALA B . B 2 7 ILE 7 7 ILE ILE B . B 2 8 ASN 8 8 ASN ASN B . B 2 9 ALA 9 9 ALA ALA B . B 2 10 GLY 10 10 GLY GLY B . B 2 11 SER 11 11 SER SER B . B 2 12 SER 12 12 SER SER B . B 2 13 SER 13 13 SER SER B . B 2 14 LEU 14 14 LEU LEU B . B 2 15 LYS 15 15 LYS LYS B . B 2 16 PHE 16 16 PHE PHE B . B 2 17 GLN 17 17 GLN GLN B . B 2 18 LEU 18 18 LEU LEU B . B 2 19 PHE 19 19 PHE PHE B . B 2 20 GLU 20 20 GLU GLU B . B 2 21 MET 21 21 MET MET B . B 2 22 PRO 22 22 PRO PRO B . B 2 23 SER 23 23 SER SER B . B 2 24 GLU 24 24 GLU GLU B . B 2 25 THR 25 25 THR THR B . B 2 26 VAL 26 26 VAL VAL B . B 2 27 LEU 27 27 LEU LEU B . B 2 28 THR 28 28 THR THR B . B 2 29 LYS 29 29 LYS LYS B . B 2 30 GLY 30 30 GLY GLY B . B 2 31 LEU 31 31 LEU LEU B . B 2 32 VAL 32 32 VAL VAL B . B 2 33 GLU 33 33 GLU GLU B . B 2 34 ARG 34 34 ARG ARG B . B 2 35 ILE 35 35 ILE ILE B . B 2 36 GLY 36 36 GLY GLY B . B 2 37 ILE 37 37 ILE ILE B . B 2 38 ALA 38 38 ALA ALA B . B 2 39 ASP 39 39 ASP ASP B . B 2 40 SER 40 40 SER SER B . B 2 41 VAL 41 41 VAL VAL B . B 2 42 PHE 42 42 PHE PHE B . B 2 43 THR 43 43 THR THR B . B 2 44 ILE 44 44 ILE ILE B . B 2 45 SER 45 45 SER SER B . B 2 46 VAL 46 46 VAL VAL B . B 2 47 ASN 47 47 ASN ASN B . B 2 48 GLY 48 48 GLY GLY B . B 2 49 GLU 49 49 GLU GLU B . B 2 50 LYS 50 50 LYS LYS B . B 2 51 ASN 51 51 ASN ASN B . B 2 52 THR 52 52 THR THR B . B 2 53 GLU 53 53 GLU GLU B . B 2 54 VAL 54 54 VAL VAL B . B 2 55 THR 55 55 THR THR B . B 2 56 ASP 56 56 ASP ASP B . B 2 57 ILE 57 57 ILE ILE B . B 2 58 PRO 58 58 PRO PRO B . B 2 59 ASP 59 59 ASP ASP B . B 2 60 HIS 60 60 HIS HIS B . B 2 61 ALA 61 61 ALA ALA B . B 2 62 VAL 62 62 VAL VAL B . B 2 63 ALA 63 63 ALA ALA B . B 2 64 VAL 64 64 VAL VAL B . B 2 65 LYS 65 65 LYS LYS B . B 2 66 MET 66 66 MET MET B . B 2 67 LEU 67 67 LEU LEU B . B 2 68 LEU 68 68 LEU LEU B . B 2 69 ASN 69 69 ASN ASN B . B 2 70 LYS 70 70 LYS LYS B . B 2 71 LEU 71 71 LEU LEU B . B 2 72 THR 72 72 THR THR B . B 2 73 GLU 73 73 GLU GLU B . B 2 74 PHE 74 74 PHE PHE B . B 2 75 GLY 75 75 GLY GLY B . B 2 76 ILE 76 76 ILE ILE B . B 2 77 ILE 77 77 ILE ILE B . B 2 78 LYS 78 78 LYS LYS B . B 2 79 ASP 79 79 ASP ASP B . B 2 80 LEU 80 80 LEU LEU B . B 2 81 ASN 81 81 ASN ASN B . B 2 82 GLU 82 82 GLU GLU B . B 2 83 ILE 83 83 ILE ILE B . B 2 84 ASP 84 84 ASP ASP B . B 2 85 GLY 85 85 GLY GLY B . B 2 86 ILE 86 86 ILE ILE B . B 2 87 GLY 87 87 GLY GLY B . B 2 88 HIS 88 88 HIS HIS B . B 2 89 ARG 89 89 ARG ARG B . B 2 90 VAL 90 90 VAL VAL B . B 2 91 VAL 91 91 VAL VAL B . B 2 92 HIS 92 92 HIS HIS B . B 2 93 GLY 93 93 GLY GLY B . B 2 94 GLY 94 94 GLY GLY B . B 2 95 GLU 95 95 GLU GLU B . B 2 96 LYS 96 96 LYS LYS B . B 2 97 PHE 97 97 PHE PHE B . B 2 98 SER 98 98 SER SER B . B 2 99 ASP 99 99 ASP ASP B . B 2 100 SER 100 100 SER SER B . B 2 101 VAL 101 101 VAL VAL B . B 2 102 LEU 102 102 LEU LEU B . B 2 103 LEU 103 103 LEU LEU B . B 2 104 THR 104 104 THR THR B . B 2 105 ASP 105 105 ASP ASP B . B 2 106 GLU 106 106 GLU GLU B . B 2 107 THR 107 107 THR THR B . B 2 108 ILE 108 108 ILE ILE B . B 2 109 LYS 109 109 LYS LYS B . B 2 110 GLU 110 110 GLU GLU B . B 2 111 ILE 111 111 ILE ILE B . B 2 112 GLU 112 112 GLU GLU B . B 2 113 ASP 113 113 ASP ASP B . B 2 114 ILE 114 114 ILE ILE B . B 2 115 SER 115 115 SER SER B . B 2 116 GLU 116 116 GLU GLU B . B 2 117 LEU 117 117 LEU LEU B . B 2 118 ALA 118 118 ALA ALA B . B 2 119 PRO 119 119 PRO PRO B . B 2 120 LEU 120 120 LEU LEU B . B 2 121 HIS 121 121 HIS HIS B . B 2 122 ASN 122 122 ASN ASN B . B 2 123 PRO 123 123 PRO PRO B . B 2 124 ALA 124 124 ALA ALA B . B 2 125 ASN 125 125 ASN ASN B . B 2 126 ILE 126 126 ILE ILE B . B 2 127 VAL 127 127 VAL VAL B . B 2 128 GLY 128 128 GLY GLY B . B 2 129 ILE 129 129 ILE ILE B . B 2 130 LYS 130 130 LYS LYS B . B 2 131 ALA 131 131 ALA ALA B . B 2 132 PHE 132 132 PHE PHE B . B 2 133 LYS 133 133 LYS LYS B . B 2 134 GLU 134 134 GLU GLU B . B 2 135 VAL 135 135 VAL VAL B . B 2 136 LEU 136 136 LEU LEU B . B 2 137 PRO 137 137 PRO PRO B . B 2 138 ASN 138 138 ASN ASN B . B 2 139 VAL 139 139 VAL VAL B . B 2 140 PRO 140 140 PRO PRO B . B 2 141 ALA 141 141 ALA ALA B . B 2 142 VAL 142 142 VAL VAL B . B 2 143 ALA 143 143 ALA ALA B . B 2 144 VAL 144 144 VAL VAL B . B 2 145 PHE 145 145 PHE PHE B . B 2 146 ASP 146 146 ASP ASP B . B 2 147 THR 147 147 THR THR B . B 2 148 ALA 148 148 ALA ALA B . B 2 149 PHE 149 149 PHE PHE B . B 2 150 HIS 150 150 HIS HIS B . B 2 151 GLN 151 151 GLN GLN B . B 2 152 THR 152 152 THR THR B . B 2 153 MET 153 153 MET MET B . B 2 154 PRO 154 154 PRO PRO B . B 2 155 GLU 155 155 GLU GLU B . B 2 156 GLN 156 156 GLN GLN B . B 2 157 SER 157 157 SER SER B . B 2 158 TYR 158 158 TYR TYR B . B 2 159 LEU 159 159 LEU LEU B . B 2 160 TYR 160 160 TYR TYR B . B 2 161 SER 161 161 SER SER B . B 2 162 LEU 162 162 LEU LEU B . B 2 163 PRO 163 163 PRO PRO B . B 2 164 TYR 164 164 TYR TYR B . B 2 165 GLU 165 165 GLU GLU B . B 2 166 TYR 166 166 TYR TYR B . B 2 167 TYR 167 167 TYR TYR B . B 2 168 GLU 168 168 GLU GLU B . B 2 169 LYS 169 169 LYS LYS B . B 2 170 PHE 170 170 PHE PHE B . B 2 171 GLY 171 171 GLY GLY B . B 2 172 ILE 172 172 ILE ILE B . B 2 173 ARG 173 173 ARG ARG B . B 2 174 LYS 174 174 LYS LYS B . B 2 175 TYR 175 175 TYR TYR B . B 2 176 GLY 176 176 GLY GLY B . B 2 177 PHE 177 177 PHE PHE B . B 2 178 HIS 178 178 HIS HIS B . B 2 179 GLY 179 179 GLY GLY B . B 2 180 THR 180 180 THR THR B . B 2 181 SER 181 181 SER SER B . B 2 182 HIS 182 182 HIS HIS B . B 2 183 LYS 183 183 LYS LYS B . B 2 184 TYR 184 184 TYR TYR B . B 2 185 VAL 185 185 VAL VAL B . B 2 186 THR 186 186 THR THR B . B 2 187 GLU 187 187 GLU GLU B . B 2 188 ARG 188 188 ARG ARG B . B 2 189 ALA 189 189 ALA ALA B . B 2 190 ALA 190 190 ALA ALA B . B 2 191 GLU 191 191 GLU GLU B . B 2 192 LEU 192 192 LEU LEU B . B 2 193 LEU 193 193 LEU LEU B . B 2 194 GLY 194 194 GLY GLY B . B 2 195 ARG 195 195 ARG ARG B . B 2 196 PRO 196 196 PRO PRO B . B 2 197 LEU 197 197 LEU LEU B . B 2 198 LYS 198 198 LYS LYS B . B 2 199 ASP 199 199 ASP ASP B . B 2 200 LEU 200 200 LEU LEU B . B 2 201 ARG 201 201 ARG ARG B . B 2 202 LEU 202 202 LEU LEU B . B 2 203 ILE 203 203 ILE ILE B . B 2 204 SER 204 204 SER SER B . B 2 205 CYS 205 205 CYS CYS B . B 2 206 HIS 206 206 HIS HIS B . B 2 207 LEU 207 207 LEU LEU B . B 2 208 GLY 208 208 GLY GLY B . B 2 209 ASN 209 209 ASN ASN B . B 2 210 GLY 210 210 GLY GLY B . B 2 211 ALA 211 211 ALA ALA B . B 2 212 SER 212 212 SER SER B . B 2 213 ILE 213 213 ILE ILE B . B 2 214 ALA 214 214 ALA ALA B . B 2 215 ALA 215 215 ALA ALA B . B 2 216 VAL 216 216 VAL VAL B . B 2 217 GLU 217 217 GLU GLU B . B 2 218 GLY 218 218 GLY GLY B . B 2 219 GLY 219 219 GLY GLY B . B 2 220 LYS 220 220 LYS LYS B . B 2 221 SER 221 221 SER SER B . B 2 222 ILE 222 222 ILE ILE B . B 2 223 ASP 223 223 ASP ASP B . B 2 224 THR 224 224 THR THR B . B 2 225 SER 225 225 SER SER B . B 2 226 MET 226 226 MET MET B . B 2 227 GLY 227 227 GLY GLY B . B 2 228 PHE 228 228 PHE PHE B . B 2 229 THR 229 229 THR THR B . B 2 230 PRO 230 230 PRO PRO B . B 2 231 LEU 231 231 LEU LEU B . B 2 232 ALA 232 232 ALA ALA B . B 2 233 GLY 233 233 GLY GLY B . B 2 234 VAL 234 234 VAL VAL B . B 2 235 ALA 235 235 ALA ALA B . B 2 236 MET 236 236 MET MET B . B 2 237 GLY 237 237 GLY GLY B . B 2 238 THR 238 238 THR THR B . B 2 239 ARG 239 239 ARG ARG B . B 2 240 SER 240 240 SER SER B . B 2 241 GLY 241 241 GLY GLY B . B 2 242 ASN 242 242 ASN ASN B . B 2 243 ILE 243 243 ILE ILE B . B 2 244 ASP 244 244 ASP ASP B . B 2 245 PRO 245 245 PRO PRO B . B 2 246 ALA 246 246 ALA ALA B . B 2 247 LEU 247 247 LEU LEU B . B 2 248 ILE 248 248 ILE ILE B . B 2 249 PRO 249 249 PRO PRO B . B 2 250 TYR 250 250 TYR TYR B . B 2 251 ILE 251 251 ILE ILE B . B 2 252 MET 252 252 MET MET B . B 2 253 GLU 253 253 GLU GLU B . B 2 254 LYS 254 254 LYS LYS B . B 2 255 THR 255 255 THR THR B . B 2 256 GLY 256 256 GLY GLY B . B 2 257 GLN 257 257 GLN GLN B . B 2 258 THR 258 258 THR THR B . B 2 259 ALA 259 259 ALA ALA B . B 2 260 ASP 260 260 ASP ASP B . B 2 261 GLU 261 261 GLU GLU B . B 2 262 VAL 262 262 VAL VAL B . B 2 263 LEU 263 263 LEU LEU B . B 2 264 ASN 264 264 ASN ASN B . B 2 265 THR 265 265 THR THR B . B 2 266 LEU 266 266 LEU LEU B . B 2 267 ASN 267 267 ASN ASN B . B 2 268 LYS 268 268 LYS LYS B . B 2 269 LYS 269 269 LYS LYS B . B 2 270 SER 270 270 SER SER B . B 2 271 GLY 271 271 GLY GLY B . B 2 272 LEU 272 272 LEU LEU B . B 2 273 LEU 273 273 LEU LEU B . B 2 274 GLY 274 274 GLY GLY B . B 2 275 ILE 275 275 ILE ILE B . B 2 276 SER 276 276 SER SER B . B 2 277 GLY 277 277 GLY GLY B . B 2 278 PHE 278 278 PHE PHE B . B 2 279 SER 279 279 SER SER B . B 2 280 SER 280 280 SER SER B . B 2 281 ASP 281 281 ASP ASP B . B 2 282 LEU 282 282 LEU LEU B . B 2 283 ARG 283 283 ARG ARG B . B 2 284 ASP 284 284 ASP ASP B . B 2 285 ILE 285 285 ILE ILE B . B 2 286 VAL 286 286 VAL VAL B . B 2 287 GLU 287 287 GLU GLU B . B 2 288 ALA 288 288 ALA ALA B . B 2 289 THR 289 289 THR THR B . B 2 290 LYS 290 290 LYS LYS B . B 2 291 GLU 291 291 GLU GLU B . B 2 292 GLY 292 292 GLY GLY B . B 2 293 ASN 293 293 ASN ASN B . B 2 294 GLU 294 294 GLU GLU B . B 2 295 ARG 295 295 ARG ARG B . B 2 296 ALA 296 296 ALA ALA B . B 2 297 GLU 297 297 GLU GLU B . B 2 298 THR 298 298 THR THR B . B 2 299 ALA 299 299 ALA ALA B . B 2 300 LEU 300 300 LEU LEU B . B 2 301 GLU 301 301 GLU GLU B . B 2 302 VAL 302 302 VAL VAL B . B 2 303 PHE 303 303 PHE PHE B . B 2 304 ALA 304 304 ALA ALA B . B 2 305 SER 305 305 SER SER B . B 2 306 ARG 306 306 ARG ARG B . B 2 307 ILE 307 307 ILE ILE B . B 2 308 HIS 308 308 HIS HIS B . B 2 309 LYS 309 309 LYS LYS B . B 2 310 TYR 310 310 TYR TYR B . B 2 311 ILE 311 311 ILE ILE B . B 2 312 GLY 312 312 GLY GLY B . B 2 313 SER 313 313 SER SER B . B 2 314 TYR 314 314 TYR TYR B . B 2 315 ALA 315 315 ALA ALA B . B 2 316 ALA 316 316 ALA ALA B . B 2 317 ARG 317 317 ARG ARG B . B 2 318 MET 318 318 MET MET B . B 2 319 SER 319 319 SER SER B . B 2 320 GLY 320 320 GLY GLY B . B 2 321 VAL 321 321 VAL VAL B . B 2 322 ASP 322 322 ASP ASP B . B 2 323 ALA 323 323 ALA ALA B . B 2 324 ILE 324 324 ILE ILE B . B 2 325 ILE 325 325 ILE ILE B . B 2 326 PHE 326 326 PHE PHE B . B 2 327 THR 327 327 THR THR B . B 2 328 ALA 328 328 ALA ALA B . B 2 329 GLY 329 329 GLY GLY B . B 2 330 ILE 330 330 ILE ILE B . B 2 331 GLY 331 331 GLY GLY B . B 2 332 GLU 332 332 GLU GLU B . B 2 333 ASN 333 333 ASN ASN B . B 2 334 SER 334 334 SER SER B . B 2 335 VAL 335 335 VAL VAL B . B 2 336 GLU 336 336 GLU GLU B . B 2 337 VAL 337 337 VAL VAL B . B 2 338 ARG 338 338 ARG ARG B . B 2 339 GLU 339 339 GLU GLU B . B 2 340 ARG 340 340 ARG ARG B . B 2 341 VAL 341 341 VAL VAL B . B 2 342 LEU 342 342 LEU LEU B . B 2 343 ARG 343 343 ARG ARG B . B 2 344 GLY 344 344 GLY GLY B . B 2 345 LEU 345 345 LEU LEU B . B 2 346 GLU 346 346 GLU GLU B . B 2 347 PHE 347 347 PHE PHE B . B 2 348 MET 348 348 MET MET B . B 2 349 GLY 349 349 GLY GLY B . B 2 350 VAL 350 350 VAL VAL B . B 2 351 TYR 351 351 TYR TYR B . B 2 352 TRP 352 352 TRP TRP B . B 2 353 ASP 353 353 ASP ASP B . B 2 354 PRO 354 354 PRO PRO B . B 2 355 ALA 355 355 ALA ALA B . B 2 356 LEU 356 356 LEU LEU B . B 2 357 ASN 357 357 ASN ASN B . B 2 358 ASN 358 358 ASN ASN B . B 2 359 VAL 359 359 VAL VAL B . B 2 360 ARG 360 360 ARG ARG B . B 2 361 GLY 361 361 GLY GLY B . B 2 362 GLU 362 362 GLU GLU B . B 2 363 GLU 363 363 GLU GLU B . B 2 364 ALA 364 364 ALA ALA B . B 2 365 PHE 365 365 PHE PHE B . B 2 366 ILE 366 366 ILE ILE B . B 2 367 SER 367 367 SER SER B . B 2 368 TYR 368 368 TYR TYR B . B 2 369 PRO 369 369 PRO PRO B . B 2 370 HIS 370 370 HIS HIS B . B 2 371 SER 371 371 SER SER B . B 2 372 PRO 372 372 PRO PRO B . B 2 373 VAL 373 373 VAL VAL B . B 2 374 LYS 374 374 LYS LYS B . B 2 375 VAL 375 375 VAL VAL B . B 2 376 MET 376 376 MET MET B . B 2 377 ILE 377 377 ILE ILE B . B 2 378 ILE 378 378 ILE ILE B . B 2 379 PRO 379 379 PRO PRO B . B 2 380 THR 380 380 THR THR B . B 2 381 ASP 381 381 ASP ASP B . B 2 382 GLU 382 382 GLU GLU B . B 2 383 GLU 383 383 GLU GLU B . B 2 384 VAL 384 384 VAL VAL B . B 2 385 MET 385 385 MET MET B . B 2 386 ILE 386 386 ILE ILE B . B 2 387 ALA 387 387 ALA ALA B . B 2 388 ARG 388 388 ARG ARG B . B 2 389 ASP 389 389 ASP ASP B . B 2 390 VAL 390 390 VAL VAL B . B 2 391 VAL 391 391 VAL VAL B . B 2 392 ARG 392 392 ARG ARG B . B 2 393 LEU 393 393 LEU LEU B . B 2 394 ALA 394 394 ALA ALA B . B 2 395 LYS 395 395 LYS LYS B . # # loop_ # #