data_9A8X

#
_entry.id  9A8X
#
loop_
_atom_type.symbol
C
FE
H
N
O
S
#
loop_
_audit_author.name
_audit_author.pdbx_ordinal
"Tohd, R."	1
"Yu, J."	2
"Kurisu, G."	3
#
loop_
_audit_conform.dict_location
_audit_conform.dict_name
_audit_conform.dict_version
https://mmcif.wwpdb.org/dictionaries/ascii/mmcif_ihm_ext.dic	mmcif_ihm_ext.dic	1.26
http://mmcif.wwpdb.org/dictionaries/ascii/mmcif_pdbx_v50.dic	mmcif_pdbx.dic	5.395
#
_pdbx_database_status.status_code                     REL
_pdbx_database_status.entry_id                        9A8X
_pdbx_database_status.deposit_site                    RCSB
_pdbx_database_status.process_site                    RCSB
_pdbx_database_status.recvd_initial_deposition_date   2024-10-16 
# 
loop_
_pdbx_audit_revision_history.ordinal
_pdbx_audit_revision_history.data_content_type
_pdbx_audit_revision_history.major_revision
_pdbx_audit_revision_history.minor_revision
_pdbx_audit_revision_history.revision_date
1 'Structure model' 1 0 2024-11-20 
# 
_pdbx_audit_revision_details.ordinal             1
_pdbx_audit_revision_details.revision_ordinal    1
_pdbx_audit_revision_details.data_content_type   'Structure model'
_pdbx_audit_revision_details.provider            repository
_pdbx_audit_revision_details.type                'Initial release'
_pdbx_audit_revision_details.description         ?
#
loop_
_database_2.database_id 
_database_2.database_code 
_database_2.pdbx_database_accession 
_database_2.pdbx_DOI 
PDB 9A8X pdb_00009a8x 10.2210/pdb9a8x/pdb
#
loop_
_chem_comp.formula
_chem_comp.formula_weight
_chem_comp.id
_chem_comp.mon_nstd_flag
_chem_comp.name
_chem_comp.pdbx_synonyms
_chem_comp.type
"C3 H7 N O2"	89.094	ALA	.	ALANINE	.	"L-peptide linking"
"C6 H15 N4 O2 1"	175.212	ARG	.	ARGININE	.	"L-peptide linking"
"C4 H8 N2 O3"	132.119	ASN	.	ASPARAGINE	.	"L-peptide linking"
"C4 H7 N O4"	133.103	ASP	.	"ASPARTIC ACID"	.	"L-peptide linking"
"C3 H7 N O2 S"	121.154	CYS	.	CYSTEINE	.	"L-peptide linking"
"Fe2 S2"	175.81	FES	.	"FE2/S2 (INORGANIC) CLUSTER"	.	non-polymer
"C5 H10 N2 O3"	146.146	GLN	.	GLUTAMINE	.	"L-peptide linking"
"C5 H9 N O4"	147.13	GLU	.	"GLUTAMIC ACID"	.	"L-peptide linking"
"C2 H5 N O2"	75.067	GLY	.	GLYCINE	.	"peptide linking"
"C34 H32 Fe N4 O4"	616.499	HEM	.	"PROTOPORPHYRIN IX CONTAINING FE"	.	non-polymer
"C6 H10 N3 O2 1"	156.165	HIS	.	HISTIDINE	.	"L-peptide linking"
"C6 H13 N O2"	131.175	ILE	.	ISOLEUCINE	.	"L-peptide linking"
"C6 H13 N O2"	131.175	LEU	.	LEUCINE	.	"L-peptide linking"
"C6 H15 N2 O2 1"	147.198	LYS	.	LYSINE	.	"L-peptide linking"
"C5 H11 N O2 S"	149.208	MET	.	METHIONINE	.	"L-peptide linking"
"C9 H11 N O2"	165.192	PHE	.	PHENYLALANINE	.	"L-peptide linking"
"C5 H9 N O2"	115.132	PRO	.	PROLINE	.	"L-peptide linking"
"C3 H7 N O3"	105.093	SER	.	SERINE	.	"L-peptide linking"
"C4 H9 N O3"	119.12	THR	.	THREONINE	.	"L-peptide linking"
"C11 H12 N2 O2"	204.229	TRP	.	TRYPTOPHAN	.	"L-peptide linking"
"C9 H11 N O3"	181.191	TYR	.	TYROSINE	.	"L-peptide linking"
"C5 H11 N O2"	117.148	VAL	.	VALINE	.	"L-peptide linking"
#
_citation.country	U.S.A
_citation.id	1
_citation.journal_abbrev	"J. Biol. Chem."
_citation.journal_id_ASTM	.
_citation.journal_id_CSD	.
_citation.journal_id_ISSN	0021-9258
_citation.journal_issue	100217
_citation.journal_volume	296
_citation.page_first	1
_citation.page_last	14
_citation.pdbx_database_id_DOI	10.1074/jbc.RA120.016271
_citation.pdbx_database_id_PubMed	33839679
_citation.title	"Crystal structure of higher plant heme oxygenase-1 and its mechanism of interaction with ferredoxin"
_citation.year	2021
#
loop_
_citation_author.citation_id
_citation_author.name
_citation_author.ordinal
1	"Tohda, R."	1
1	"Tanaka, H."	2
1	"Mutoh, R."	3
1	"Zhang, X.H."	4
1	"Lee, Y.H."	5
1	"Konuma, T."	6
1	"Ikegami, T."	7
1	"Migita, C.T."	8
1	"Kurisu, G."	9
#
loop_
_entity.details
_entity.formula_weight
_entity.id
_entity.pdbx_description
_entity.pdbx_number_of_molecules
_entity.src_method
_entity.type
.	28384.432	1	"Heme oxygenase (biliverdin-producing)"	1	MAN	POLYMER
.	12091.792	2	"Ferredoxin-3, chloroplastic"	1	MAN	POLYMER
.	175.81	3	"FE2/S2 (INORGANIC) CLUSTER"	1	SYN	NON-POLYMER
.	616.499	4	"PROTOPORPHYRIN IX CONTAINING FE"	1	SYN	NON-POLYMER
#
loop_
_entity_poly.entity_id
_entity_poly.nstd_chirality
_entity_poly.nstd_linkage
_entity_poly.nstd_monomer
_entity_poly.pdbx_seq_one_letter_code
_entity_poly.pdbx_seq_one_letter_code_can
_entity_poly.pdbx_sequence_evidence_code
_entity_poly.pdbx_strand_id
_entity_poly.type
1	.	NO	NO	KGFVEEMRFVAMRLHTRDQAREGEKEVKQPEEKAVTKWDPSVEGYLKFLVDSKLVYDTLEKIVQEAPHPSYAEFRNTGLERSASLAEDLEWFKEQGYTIPEPSSPGLTYAQYLKELSVKDPQAFICHFYNIYFAHSAGGRMIGKKVAEKLLNNKALEFYKWDDDLPRLLQNVRDKLNKVAEPWSREEKDHCLEETEKSFKLSGEILRLILS	KGFVEEMRFVAMRLHTRDQAREGEKEVKQPEEKAVTKWDPSVEGYLKFLVDSKLVYDTLEKIVQEAPHPSYAEFRNTGLERSASLAEDLEWFKEQGYTIPEPSSPGLTYAQYLKELSVKDPQAFICHFYNIYFAHSAGGRMIGKKVAEKLLNNKALEFYKWDDDLPRLLQNVRDKLNKVAEPWSREEKDHCLEETEKSFKLSGEILRLILS	.	A	polypeptide(L)
2	.	NO	NO	AVYKVKLVGPEGEEHEFDAPDDAYILDAAETAGVELPYSCRAGACSTCAGKIESGSVDQSDGSFLDDGQQEEGYVLTCVSYPKSDCVIHTHKEGDLY	AVYKVKLVGPEGEEHEFDAPDDAYILDAAETAGVELPYSCRAGACSTCAGKIESGSVDQSDGSFLDDGQQEEGYVLTCVSYPKSDCVIHTHKEGDLY	.	B	polypeptide(L)
#
loop_
_entity_poly_seq.entity_id
_entity_poly_seq.hetero
_entity_poly_seq.mon_id
_entity_poly_seq.num
1	.	LYS	1
1	.	GLY	2
1	.	PHE	3
1	.	VAL	4
1	.	GLU	5
1	.	GLU	6
1	.	MET	7
1	.	ARG	8
1	.	PHE	9
1	.	VAL	10
1	.	ALA	11
1	.	MET	12
1	.	ARG	13
1	.	LEU	14
1	.	HIS	15
1	.	THR	16
1	.	ARG	17
1	.	ASP	18
1	.	GLN	19
1	.	ALA	20
1	.	ARG	21
1	.	GLU	22
1	.	GLY	23
1	.	GLU	24
1	.	LYS	25
1	.	GLU	26
1	.	VAL	27
1	.	LYS	28
1	.	GLN	29
1	.	PRO	30
1	.	GLU	31
1	.	GLU	32
1	.	LYS	33
1	.	ALA	34
1	.	VAL	35
1	.	THR	36
1	.	LYS	37
1	.	TRP	38
1	.	ASP	39
1	.	PRO	40
1	.	SER	41
1	.	VAL	42
1	.	GLU	43
1	.	GLY	44
1	.	TYR	45
1	.	LEU	46
1	.	LYS	47
1	.	PHE	48
1	.	LEU	49
1	.	VAL	50
1	.	ASP	51
1	.	SER	52
1	.	LYS	53
1	.	LEU	54
1	.	VAL	55
1	.	TYR	56
1	.	ASP	57
1	.	THR	58
1	.	LEU	59
1	.	GLU	60
1	.	LYS	61
1	.	ILE	62
1	.	VAL	63
1	.	GLN	64
1	.	GLU	65
1	.	ALA	66
1	.	PRO	67
1	.	HIS	68
1	.	PRO	69
1	.	SER	70
1	.	TYR	71
1	.	ALA	72
1	.	GLU	73
1	.	PHE	74
1	.	ARG	75
1	.	ASN	76
1	.	THR	77
1	.	GLY	78
1	.	LEU	79
1	.	GLU	80
1	.	ARG	81
1	.	SER	82
1	.	ALA	83
1	.	SER	84
1	.	LEU	85
1	.	ALA	86
1	.	GLU	87
1	.	ASP	88
1	.	LEU	89
1	.	GLU	90
1	.	TRP	91
1	.	PHE	92
1	.	LYS	93
1	.	GLU	94
1	.	GLN	95
1	.	GLY	96
1	.	TYR	97
1	.	THR	98
1	.	ILE	99
1	.	PRO	100
1	.	GLU	101
1	.	PRO	102
1	.	SER	103
1	.	SER	104
1	.	PRO	105
1	.	GLY	106
1	.	LEU	107
1	.	THR	108
1	.	TYR	109
1	.	ALA	110
1	.	GLN	111
1	.	TYR	112
1	.	LEU	113
1	.	LYS	114
1	.	GLU	115
1	.	LEU	116
1	.	SER	117
1	.	VAL	118
1	.	LYS	119
1	.	ASP	120
1	.	PRO	121
1	.	GLN	122
1	.	ALA	123
1	.	PHE	124
1	.	ILE	125
1	.	CYS	126
1	.	HIS	127
1	.	PHE	128
1	.	TYR	129
1	.	ASN	130
1	.	ILE	131
1	.	TYR	132
1	.	PHE	133
1	.	ALA	134
1	.	HIS	135
1	.	SER	136
1	.	ALA	137
1	.	GLY	138
1	.	GLY	139
1	.	ARG	140
1	.	MET	141
1	.	ILE	142
1	.	GLY	143
1	.	LYS	144
1	.	LYS	145
1	.	VAL	146
1	.	ALA	147
1	.	GLU	148
1	.	LYS	149
1	.	LEU	150
1	.	LEU	151
1	.	ASN	152
1	.	ASN	153
1	.	LYS	154
1	.	ALA	155
1	.	LEU	156
1	.	GLU	157
1	.	PHE	158
1	.	TYR	159
1	.	LYS	160
1	.	TRP	161
1	.	ASP	162
1	.	ASP	163
1	.	ASP	164
1	.	LEU	165
1	.	PRO	166
1	.	ARG	167
1	.	LEU	168
1	.	LEU	169
1	.	GLN	170
1	.	ASN	171
1	.	VAL	172
1	.	ARG	173
1	.	ASP	174
1	.	LYS	175
1	.	LEU	176
1	.	ASN	177
1	.	LYS	178
1	.	VAL	179
1	.	ALA	180
1	.	GLU	181
1	.	PRO	182
1	.	TRP	183
1	.	SER	184
1	.	ARG	185
1	.	GLU	186
1	.	GLU	187
1	.	LYS	188
1	.	ASP	189
1	.	HIS	190
1	.	CYS	191
1	.	LEU	192
1	.	GLU	193
1	.	GLU	194
1	.	THR	195
1	.	GLU	196
1	.	LYS	197
1	.	SER	198
1	.	PHE	199
1	.	LYS	200
1	.	LEU	201
1	.	SER	202
1	.	GLY	203
1	.	GLU	204
1	.	ILE	205
1	.	LEU	206
1	.	ARG	207
1	.	LEU	208
1	.	ILE	209
1	.	LEU	210
1	.	SER	211
2	.	ALA	1
2	.	VAL	2
2	.	TYR	3
2	.	LYS	4
2	.	VAL	5
2	.	LYS	6
2	.	LEU	7
2	.	VAL	8
2	.	GLY	9
2	.	PRO	10
2	.	GLU	11
2	.	GLY	12
2	.	GLU	13
2	.	GLU	14
2	.	HIS	15
2	.	GLU	16
2	.	PHE	17
2	.	ASP	18
2	.	ALA	19
2	.	PRO	20
2	.	ASP	21
2	.	ASP	22
2	.	ALA	23
2	.	TYR	24
2	.	ILE	25
2	.	LEU	26
2	.	ASP	27
2	.	ALA	28
2	.	ALA	29
2	.	GLU	30
2	.	THR	31
2	.	ALA	32
2	.	GLY	33
2	.	VAL	34
2	.	GLU	35
2	.	LEU	36
2	.	PRO	37
2	.	TYR	38
2	.	SER	39
2	.	CYS	40
2	.	ARG	41
2	.	ALA	42
2	.	GLY	43
2	.	ALA	44
2	.	CYS	45
2	.	SER	46
2	.	THR	47
2	.	CYS	48
2	.	ALA	49
2	.	GLY	50
2	.	LYS	51
2	.	ILE	52
2	.	GLU	53
2	.	SER	54
2	.	GLY	55
2	.	SER	56
2	.	VAL	57
2	.	ASP	58
2	.	GLN	59
2	.	SER	60
2	.	ASP	61
2	.	GLY	62
2	.	SER	63
2	.	PHE	64
2	.	LEU	65
2	.	ASP	66
2	.	ASP	67
2	.	GLY	68
2	.	GLN	69
2	.	GLN	70
2	.	GLU	71
2	.	GLU	72
2	.	GLY	73
2	.	TYR	74
2	.	VAL	75
2	.	LEU	76
2	.	THR	77
2	.	CYS	78
2	.	VAL	79
2	.	SER	80
2	.	TYR	81
2	.	PRO	82
2	.	LYS	83
2	.	SER	84
2	.	ASP	85
2	.	CYS	86
2	.	VAL	87
2	.	ILE	88
2	.	HIS	89
2	.	THR	90
2	.	HIS	91
2	.	LYS	92
2	.	GLU	93
2	.	GLY	94
2	.	ASP	95
2	.	LEU	96
2	.	TYR	97
#
loop_
_entity_src_gen.entity_id
_entity_src_gen.gene_src_common_name
_entity_src_gen.gene_src_genus
_entity_src_gen.pdbx_alt_source_flag
_entity_src_gen.pdbx_gene_src_scientific_name
_entity_src_gen.pdbx_src_id
1	"Soybean, Glycine hispida"	.	.	"Glycine max"	1
2	Maize	.	.	"Zea mays"	2
#
loop_
_ihm_dataset_group.application
_ihm_dataset_group.details
_ihm_dataset_group.id
_ihm_dataset_group.name
other	"Interface residues between two proteins obtained from CSP NMR data"	1	.
other	"All inputs for docking"	2	.
#
loop_
_ihm_dataset_group_link.dataset_list_id
_ihm_dataset_group_link.group_id
1	1
1	2
2	2
3	2
#
loop_
_ihm_dataset_list.data_type
_ihm_dataset_list.database_hosted
_ihm_dataset_list.details
_ihm_dataset_list.id
"NMR data"	YES	"NMR chemical shift perturbation experiments obtained using chemical shift assignments from BMRB entry 26301"	1
"Experimental model"	YES	"PDB entry 7CKA Crystal structure of GmHO-1"	2
"Experimental model"	YES	"PDB entry 5H57 Crystal structure of maize Fd"	3
#
loop_
_ihm_dataset_related_db_reference.accession_code
_ihm_dataset_related_db_reference.dataset_list_id
_ihm_dataset_related_db_reference.db_name
_ihm_dataset_related_db_reference.details
_ihm_dataset_related_db_reference.id
_ihm_dataset_related_db_reference.version
26301	1	BMRB	.	1	.
7CKA	2	PDB	"Crystal structure of GmHO-1"	2	.
5H57	3	PDB	"Crystal structure of maize Fd"	3	.
#
loop_
_ihm_entity_poly_segment.comp_id_begin
_ihm_entity_poly_segment.comp_id_end
_ihm_entity_poly_segment.entity_id
_ihm_entity_poly_segment.id
_ihm_entity_poly_segment.seq_id_begin
_ihm_entity_poly_segment.seq_id_end
LYS	SER	1	1	1	211
ALA	TYR	2	2	1	97
#
loop_
_ihm_feature_list.details
_ihm_feature_list.entity_type
_ihm_feature_list.feature_id
_ihm_feature_list.feature_type
.	polymer	1	residue
.	polymer	2	residue
.	polymer	3	residue
.	polymer	4	residue
.	polymer	5	residue
.	polymer	6	residue
.	polymer	7	residue
.	polymer	8	residue
.	polymer	9	residue
.	polymer	10	residue
.	polymer	11	residue
.	polymer	12	residue
.	polymer	13	residue
.	polymer	14	residue
#
loop_
_ihm_interface_residue_feature.binding_partner_asym_id
_ihm_interface_residue_feature.binding_partner_entity_id
_ihm_interface_residue_feature.dataset_list_id
_ihm_interface_residue_feature.details
_ihm_interface_residue_feature.feature_id
_ihm_interface_residue_feature.ordinal_id
A	1	1	"Residues in maize Fd III (chain B in this entry, PDB 5H57) identified from the chemical shift perturbations"	1	1
A	1	1	"Residues in maize Fd III (chain B in this entry, PDB 5H57) identified from the chemical shift perturbations"	2	2
A	1	1	"Residues in maize Fd III (chain B in this entry, PDB 5H57) identified from the chemical shift perturbations"	3	3
A	1	1	"Residues in maize Fd III (chain B in this entry, PDB 5H57) identified from the chemical shift perturbations"	4	4
A	1	1	"Residues in maize Fd III (chain B in this entry, PDB 5H57) identified from the chemical shift perturbations"	5	5
A	1	1	"Residues in maize Fd III (chain B in this entry, PDB 5H57) identified from the chemical shift perturbations"	6	6
A	1	1	"Residues in maize Fd III (chain B in this entry, PDB 5H57) identified from the chemical shift perturbations"	7	7
A	1	1	"Residues in maize Fd III (chain B in this entry, PDB 5H57) identified from the chemical shift perturbations"	8	8
A	1	1	"Residues in maize Fd III (chain B in this entry, PDB 5H57) identified from the chemical shift perturbations"	9	9
A	1	1	"Residues in maize Fd III (chain B in this entry, PDB 5H57) identified from the chemical shift perturbations"	10	10
A	1	1	"Residues in maize Fd III (chain B in this entry, PDB 5H57) identified from the chemical shift perturbations"	11	11
A	1	1	"Residues in maize Fd III (chain B in this entry, PDB 5H57) identified from the chemical shift perturbations"	12	12
A	1	1	"Residues in maize Fd III (chain B in this entry, PDB 5H57) identified from the chemical shift perturbations"	13	13
A	1	1	"Residues in maize Fd III (chain B in this entry, PDB 5H57) identified from the chemical shift perturbations"	14	14
#
_ihm_model_group.details	.
_ihm_model_group.id	1
_ihm_model_group.name	.
#
loop_
_ihm_model_group_link.group_id
_ihm_model_group_link.model_id
1	1
1	2
1	3
#
loop_
_ihm_model_list.assembly_id
_ihm_model_list.model_id
_ihm_model_list.model_name
_ihm_model_list.protocol_id
_ihm_model_list.representation_id
1	1	"Model 1 of top cluster with a HADDOCK score of -57.0 +/- 2.2"	1	1
1	2	"Model 2 of top cluster with a HADDOCK score of -57.0 +/- 2.2"	1	1
1	3	"Model 3 of top cluster with a HADDOCK score of -57.0 +/- 2.2"	1	1
#
_ihm_model_representation.details	.
_ihm_model_representation.id	1
_ihm_model_representation.name	.
#
loop_
_ihm_model_representation_details.description
_ihm_model_representation_details.entity_asym_id
_ihm_model_representation_details.entity_description
_ihm_model_representation_details.entity_id
_ihm_model_representation_details.entity_poly_segment_id
_ihm_model_representation_details.id
_ihm_model_representation_details.model_granularity
_ihm_model_representation_details.model_mode
_ihm_model_representation_details.model_object_count
_ihm_model_representation_details.model_object_primitive
_ihm_model_representation_details.representation_id
_ihm_model_representation_details.starting_model_id
.	A	"Heme oxygenase (biliverdin-producing)"	1	1	1	by-atom	flexible	.	atomistic	1	1
.	C	"FE2/S2 (INORGANIC) CLUSTER"	3	.	2	by-atom	flexible	.	atomistic	1	.
.	D	"PROTOPORPHYRIN IX CONTAINING FE"	4	.	3	by-atom	flexible	.	atomistic	1	.
.	B	"Ferredoxin-3, chloroplastic"	2	2	4	by-atom	flexible	.	atomistic	1	2
#
_ihm_modeling_protocol.details	.
_ihm_modeling_protocol.id	1
_ihm_modeling_protocol.num_steps	1
_ihm_modeling_protocol.protocol_name	modeling
#
_ihm_modeling_protocol_details.dataset_group_id	1
_ihm_modeling_protocol_details.description	"A docking simulation was performed with holo-GmHO-1 (Protein Data Bank [PDB] ID:7CKA) and maize Fd (Protein Data Bank [PDB] ID: 5h57) using the HADDOCK server based on NMR chemical shift perturbation experiments of apo-GmHO-1. Ten HADDOCK models were successfully obtained, from which the top cluster of models with a HADDOCK score of -57.0 +/- 2.2 were adopted."
_ihm_modeling_protocol_details.ensemble_flag	YES
_ihm_modeling_protocol_details.id	1
_ihm_modeling_protocol_details.multi_scale_flag	NO
_ihm_modeling_protocol_details.multi_state_flag	NO
_ihm_modeling_protocol_details.num_models_begin	.
_ihm_modeling_protocol_details.num_models_end	.
_ihm_modeling_protocol_details.ordered_flag	NO
_ihm_modeling_protocol_details.protocol_id	1
_ihm_modeling_protocol_details.script_file_id	.
_ihm_modeling_protocol_details.software_id	1
_ihm_modeling_protocol_details.step_id	1
_ihm_modeling_protocol_details.step_method	.
_ihm_modeling_protocol_details.step_name	docking
_ihm_modeling_protocol_details.struct_assembly_description	.
_ihm_modeling_protocol_details.struct_assembly_id	1
#
loop_
_ihm_poly_residue_feature.asym_id
_ihm_poly_residue_feature.comp_id_begin
_ihm_poly_residue_feature.comp_id_end
_ihm_poly_residue_feature.entity_id
_ihm_poly_residue_feature.feature_id
_ihm_poly_residue_feature.interface_residue_flag
_ihm_poly_residue_feature.ordinal_id
_ihm_poly_residue_feature.rep_atom
_ihm_poly_residue_feature.residue_range_granularity
_ihm_poly_residue_feature.seq_id_begin
_ihm_poly_residue_feature.seq_id_end
B	ASP	ASP	2	1	YES	1	.	.	21	21
B	ALA	ALA	2	2	YES	2	.	.	23	23
B	TYR	TYR	2	3	YES	3	.	.	24	24
B	ASP	ASP	2	4	YES	4	.	.	27	27
B	GLU	GLU	2	5	YES	5	.	.	30	30
B	THR	THR	2	6	YES	6	.	.	31	31
B	GLY	GLY	2	7	YES	7	.	.	33	33
B	VAL	VAL	2	8	YES	8	.	.	34	34
B	GLY	GLY	2	9	YES	9	.	.	62	62
B	SER	SER	2	10	YES	10	.	.	63	63
B	PHE	PHE	2	11	YES	11	.	.	64	64
B	GLN	GLN	2	12	YES	12	.	.	69	69
B	ASP	ASP	2	13	YES	13	.	.	95	95
B	TYR	TYR	2	14	YES	14	.	.	97	97
#
loop_
_ihm_starting_model_details.asym_id
_ihm_starting_model_details.dataset_list_id
_ihm_starting_model_details.description
_ihm_starting_model_details.entity_description
_ihm_starting_model_details.entity_id
_ihm_starting_model_details.entity_poly_segment_id
_ihm_starting_model_details.starting_model_auth_asym_id
_ihm_starting_model_details.starting_model_id
_ihm_starting_model_details.starting_model_sequence_offset
_ihm_starting_model_details.starting_model_source
A	2	.	.	1	1	A	1	-15	"experimental model"
B	3	.	.	2	2	A	2	0	"experimental model"
#
_ihm_struct_assembly.description	"Complex structure of holo-GmHO-1 and Ferredoxin III from maize root modeled using the HADDOCK server based on NMR chemical shift perturbation experiments of apo-GmHO-1, with the crystal structure of GmHO-1 (7CKA) and maize Fd (5H57)"
_ihm_struct_assembly.id	1
_ihm_struct_assembly.name	"Holo-GmHO-1 and Ferredoxin III from maize root"
#
loop_
_ihm_struct_assembly_details.assembly_id
_ihm_struct_assembly_details.asym_id
_ihm_struct_assembly_details.entity_description
_ihm_struct_assembly_details.entity_id
_ihm_struct_assembly_details.entity_poly_segment_id
_ihm_struct_assembly_details.id
_ihm_struct_assembly_details.parent_assembly_id
1	A	"Heme oxygenase (biliverdin-producing)"	1	1	1	1
1	B	"Ferredoxin-3, chloroplastic"	2	2	2	1
1	C	"FE2/S2 (INORGANIC) CLUSTER"	3	.	3	1
1	D	"PROTOPORPHYRIN IX CONTAINING FE"	4	.	4	1
#
loop_
_pdbx_entity_nonpoly.comp_id
_pdbx_entity_nonpoly.entity_id
_pdbx_entity_nonpoly.name
FES	3	"FE2/S2 (INORGANIC) CLUSTER"
HEM	4	"PROTOPORPHYRIN IX CONTAINING FE"
#
_software.citation_id	.
_software.classification	"model building"
_software.description	"NMR-based docking simulation"
_software.location	https://rascar.science.uu.nl/haddock2.4/
_software.name	HADDOCK
_software.pdbx_ordinal	1
_software.type	program
_software.version	2.4
#
_struct.entry_id	9A8X
_struct.pdbx_CASP_flag	.
_struct.pdbx_descriptor	.
_struct.pdbx_details	.
_struct.pdbx_model_details	"This model was generated by using the HADDOCK server based on NMR chemical shift perturbation experiments of apo-GmHO-1, with the crystal structure of GmHO-1 (7CKA) and maize Fd (5H57)"
_struct.pdbx_model_type_details	"DOCKING SIMULATION"
_struct.pdbx_structure_determination_methodology	integrative
_struct.title	"Complex structure of holo-GmHO-1 and Ferredoxin III from maize root"
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_PDB_id
_struct_asym.pdbx_alt_id
_struct_asym.pdbx_blank_PDB_chainid_flag
_struct_asym.pdbx_modified
_struct_asym.pdbx_order
_struct_asym.pdbx_type
.	1	A	.	.	.	.	.	.
.	2	B	.	.	.	.	.	.
.	3	C	.	.	.	.	.	.
.	4	D	.	.	.	.	.	.
#
loop_
_struct_ref.db_code
_struct_ref.db_name
_struct_ref.details
_struct_ref.entity_id
_struct_ref.id
_struct_ref.pdbx_align_begin
_struct_ref.pdbx_align_end
_struct_ref.pdbx_db_accession
_struct_ref.pdbx_db_isoform
_struct_ref.pdbx_seq_one_letter_code
Q94FX1_SOYBN	UNP	.	1	1	40	250	Q94FX1	.	.
FER3_MAIZE	UNP	.	2	2	56	152	P27788	.	.
#
loop_
_struct_ref_seq.align_id
_struct_ref_seq.db_align_beg
_struct_ref_seq.db_align_end
_struct_ref_seq.ref_id
_struct_ref_seq.seq_align_beg
_struct_ref_seq.seq_align_end
1	40	250	1	1	211
2	56	152	2	1	97
#
loop_
_pdbx_poly_seq_scheme.asym_id
_pdbx_poly_seq_scheme.entity_id
_pdbx_poly_seq_scheme.seq_id
_pdbx_poly_seq_scheme.mon_id
_pdbx_poly_seq_scheme.pdb_seq_num
_pdbx_poly_seq_scheme.auth_seq_num
_pdbx_poly_seq_scheme.pdb_mon_id
_pdbx_poly_seq_scheme.auth_mon_id
_pdbx_poly_seq_scheme.pdb_strand_id
_pdbx_poly_seq_scheme.pdb_ins_code
A 1 1 LYS 16 16 LYS LYS A .
A 1 2 GLY 17 17 GLY GLY A .
A 1 3 PHE 18 18 PHE PHE A .
A 1 4 VAL 19 19 VAL VAL A .
A 1 5 GLU 20 20 GLU GLU A .
A 1 6 GLU 21 21 GLU GLU A .
A 1 7 MET 22 22 MET MET A .
A 1 8 ARG 23 23 ARG ARG A .
A 1 9 PHE 24 24 PHE PHE A .
A 1 10 VAL 25 25 VAL VAL A .
A 1 11 ALA 26 26 ALA ALA A .
A 1 12 MET 27 27 MET MET A .
A 1 13 ARG 28 28 ARG ARG A .
A 1 14 LEU 29 29 LEU LEU A .
A 1 15 HIS 30 30 HIS HIS A .
A 1 16 THR 31 31 THR THR A .
A 1 17 ARG 32 32 ARG ARG A .
A 1 18 ASP 33 33 ASP ASP A .
A 1 19 GLN 34 34 GLN GLN A .
A 1 20 ALA 35 35 ALA ALA A .
A 1 21 ARG 36 36 ARG ARG A .
A 1 22 GLU 37 37 GLU GLU A .
A 1 23 GLY 38 38 GLY GLY A .
A 1 24 GLU 39 39 GLU GLU A .
A 1 25 LYS 40 40 LYS LYS A .
A 1 26 GLU 41 41 GLU GLU A .
A 1 27 VAL 42 42 VAL VAL A .
A 1 28 LYS 43 43 LYS LYS A .
A 1 29 GLN 44 44 GLN GLN A .
A 1 30 PRO 45 45 PRO PRO A .
A 1 31 GLU 46 46 GLU GLU A .
A 1 32 GLU 47 47 GLU GLU A .
A 1 33 LYS 48 48 LYS LYS A .
A 1 34 ALA 49 49 ALA ALA A .
A 1 35 VAL 50 50 VAL VAL A .
A 1 36 THR 51 51 THR THR A .
A 1 37 LYS 52 52 LYS LYS A .
A 1 38 TRP 53 53 TRP TRP A .
A 1 39 ASP 54 54 ASP ASP A .
A 1 40 PRO 55 55 PRO PRO A .
A 1 41 SER 56 56 SER SER A .
A 1 42 VAL 57 57 VAL VAL A .
A 1 43 GLU 58 58 GLU GLU A .
A 1 44 GLY 59 59 GLY GLY A .
A 1 45 TYR 60 60 TYR TYR A .
A 1 46 LEU 61 61 LEU LEU A .
A 1 47 LYS 62 62 LYS LYS A .
A 1 48 PHE 63 63 PHE PHE A .
A 1 49 LEU 64 64 LEU LEU A .
A 1 50 VAL 65 65 VAL VAL A .
A 1 51 ASP 66 66 ASP ASP A .
A 1 52 SER 67 67 SER SER A .
A 1 53 LYS 68 68 LYS LYS A .
A 1 54 LEU 69 69 LEU LEU A .
A 1 55 VAL 70 70 VAL VAL A .
A 1 56 TYR 71 71 TYR TYR A .
A 1 57 ASP 72 72 ASP ASP A .
A 1 58 THR 73 73 THR THR A .
A 1 59 LEU 74 74 LEU LEU A .
A 1 60 GLU 75 75 GLU GLU A .
A 1 61 LYS 76 76 LYS LYS A .
A 1 62 ILE 77 77 ILE ILE A .
A 1 63 VAL 78 78 VAL VAL A .
A 1 64 GLN 79 79 GLN GLN A .
A 1 65 GLU 80 80 GLU GLU A .
A 1 66 ALA 81 81 ALA ALA A .
A 1 67 PRO 82 82 PRO PRO A .
A 1 68 HIS 83 83 HIS HIS A .
A 1 69 PRO 84 84 PRO PRO A .
A 1 70 SER 85 85 SER SER A .
A 1 71 TYR 86 86 TYR TYR A .
A 1 72 ALA 87 87 ALA ALA A .
A 1 73 GLU 88 88 GLU GLU A .
A 1 74 PHE 89 89 PHE PHE A .
A 1 75 ARG 90 90 ARG ARG A .
A 1 76 ASN 91 91 ASN ASN A .
A 1 77 THR 92 92 THR THR A .
A 1 78 GLY 93 93 GLY GLY A .
A 1 79 LEU 94 94 LEU LEU A .
A 1 80 GLU 95 95 GLU GLU A .
A 1 81 ARG 96 96 ARG ARG A .
A 1 82 SER 97 97 SER SER A .
A 1 83 ALA 98 98 ALA ALA A .
A 1 84 SER 99 99 SER SER A .
A 1 85 LEU 100 100 LEU LEU A .
A 1 86 ALA 101 101 ALA ALA A .
A 1 87 GLU 102 102 GLU GLU A .
A 1 88 ASP 103 103 ASP ASP A .
A 1 89 LEU 104 104 LEU LEU A .
A 1 90 GLU 105 105 GLU GLU A .
A 1 91 TRP 106 106 TRP TRP A .
A 1 92 PHE 107 107 PHE PHE A .
A 1 93 LYS 108 108 LYS LYS A .
A 1 94 GLU 109 109 GLU GLU A .
A 1 95 GLN 110 110 GLN GLN A .
A 1 96 GLY 111 111 GLY GLY A .
A 1 97 TYR 112 112 TYR TYR A .
A 1 98 THR 113 113 THR THR A .
A 1 99 ILE 114 114 ILE ILE A .
A 1 100 PRO 115 115 PRO PRO A .
A 1 101 GLU 116 116 GLU GLU A .
A 1 102 PRO 117 117 PRO PRO A .
A 1 103 SER 118 118 SER SER A .
A 1 104 SER 119 119 SER SER A .
A 1 105 PRO 120 120 PRO PRO A .
A 1 106 GLY 121 121 GLY GLY A .
A 1 107 LEU 122 122 LEU LEU A .
A 1 108 THR 123 123 THR THR A .
A 1 109 TYR 124 124 TYR TYR A .
A 1 110 ALA 125 125 ALA ALA A .
A 1 111 GLN 126 126 GLN GLN A .
A 1 112 TYR 127 127 TYR TYR A .
A 1 113 LEU 128 128 LEU LEU A .
A 1 114 LYS 129 129 LYS LYS A .
A 1 115 GLU 130 130 GLU GLU A .
A 1 116 LEU 131 131 LEU LEU A .
A 1 117 SER 132 132 SER SER A .
A 1 118 VAL 133 133 VAL VAL A .
A 1 119 LYS 134 134 LYS LYS A .
A 1 120 ASP 135 135 ASP ASP A .
A 1 121 PRO 136 136 PRO PRO A .
A 1 122 GLN 137 137 GLN GLN A .
A 1 123 ALA 138 138 ALA ALA A .
A 1 124 PHE 139 139 PHE PHE A .
A 1 125 ILE 140 140 ILE ILE A .
A 1 126 CYS 141 141 CYS CYS A .
A 1 127 HIS 142 142 HIS HIS A .
A 1 128 PHE 143 143 PHE PHE A .
A 1 129 TYR 144 144 TYR TYR A .
A 1 130 ASN 145 145 ASN ASN A .
A 1 131 ILE 146 146 ILE ILE A .
A 1 132 TYR 147 147 TYR TYR A .
A 1 133 PHE 148 148 PHE PHE A .
A 1 134 ALA 149 149 ALA ALA A .
A 1 135 HIS 150 150 HIS HIS A .
A 1 136 SER 151 151 SER SER A .
A 1 137 ALA 152 152 ALA ALA A .
A 1 138 GLY 153 153 GLY GLY A .
A 1 139 GLY 154 154 GLY GLY A .
A 1 140 ARG 155 155 ARG ARG A .
A 1 141 MET 156 156 MET MET A .
A 1 142 ILE 157 157 ILE ILE A .
A 1 143 GLY 158 158 GLY GLY A .
A 1 144 LYS 159 159 LYS LYS A .
A 1 145 LYS 160 160 LYS LYS A .
A 1 146 VAL 161 161 VAL VAL A .
A 1 147 ALA 162 162 ALA ALA A .
A 1 148 GLU 163 163 GLU GLU A .
A 1 149 LYS 164 164 LYS LYS A .
A 1 150 LEU 165 165 LEU LEU A .
A 1 151 LEU 166 166 LEU LEU A .
A 1 152 ASN 167 167 ASN ASN A .
A 1 153 ASN 168 168 ASN ASN A .
A 1 154 LYS 169 169 LYS LYS A .
A 1 155 ALA 170 170 ALA ALA A .
A 1 156 LEU 171 171 LEU LEU A .
A 1 157 GLU 172 172 GLU GLU A .
A 1 158 PHE 173 173 PHE PHE A .
A 1 159 TYR 174 174 TYR TYR A .
A 1 160 LYS 175 175 LYS LYS A .
A 1 161 TRP 176 176 TRP TRP A .
A 1 162 ASP 177 177 ASP ASP A .
A 1 163 ASP 178 178 ASP ASP A .
A 1 164 ASP 179 179 ASP ASP A .
A 1 165 LEU 180 180 LEU LEU A .
A 1 166 PRO 181 181 PRO PRO A .
A 1 167 ARG 182 182 ARG ARG A .
A 1 168 LEU 183 183 LEU LEU A .
A 1 169 LEU 184 184 LEU LEU A .
A 1 170 GLN 185 185 GLN GLN A .
A 1 171 ASN 186 186 ASN ASN A .
A 1 172 VAL 187 187 VAL VAL A .
A 1 173 ARG 188 188 ARG ARG A .
A 1 174 ASP 189 189 ASP ASP A .
A 1 175 LYS 190 190 LYS LYS A .
A 1 176 LEU 191 191 LEU LEU A .
A 1 177 ASN 192 192 ASN ASN A .
A 1 178 LYS 193 193 LYS LYS A .
A 1 179 VAL 194 194 VAL VAL A .
A 1 180 ALA 195 195 ALA ALA A .
A 1 181 GLU 196 196 GLU GLU A .
A 1 182 PRO 197 197 PRO PRO A .
A 1 183 TRP 198 198 TRP TRP A .
A 1 184 SER 199 199 SER SER A .
A 1 185 ARG 200 200 ARG ARG A .
A 1 186 GLU 201 201 GLU GLU A .
A 1 187 GLU 202 202 GLU GLU A .
A 1 188 LYS 203 203 LYS LYS A .
A 1 189 ASP 204 204 ASP ASP A .
A 1 190 HIS 205 205 HIS HIS A .
A 1 191 CYS 206 206 CYS CYS A .
A 1 192 LEU 207 207 LEU LEU A .
A 1 193 GLU 208 208 GLU GLU A .
A 1 194 GLU 209 209 GLU GLU A .
A 1 195 THR 210 210 THR THR A .
A 1 196 GLU 211 211 GLU GLU A .
A 1 197 LYS 212 212 LYS LYS A .
A 1 198 SER 213 213 SER SER A .
A 1 199 PHE 214 214 PHE PHE A .
A 1 200 LYS 215 215 LYS LYS A .
A 1 201 LEU 216 216 LEU LEU A .
A 1 202 SER 217 217 SER SER A .
A 1 203 GLY 218 218 GLY GLY A .
A 1 204 GLU 219 219 GLU GLU A .
A 1 205 ILE 220 220 ILE ILE A .
A 1 206 LEU 221 221 LEU LEU A .
A 1 207 ARG 222 222 ARG ARG A .
A 1 208 LEU 223 223 LEU LEU A .
A 1 209 ILE 224 224 ILE ILE A .
A 1 210 LEU 225 225 LEU LEU A .
A 1 211 SER 226 226 SER SER A .
B 2 1 ALA 1 1 ALA ALA B .
B 2 2 VAL 2 2 VAL VAL B .
B 2 3 TYR 3 3 TYR TYR B .
B 2 4 LYS 4 4 LYS LYS B .
B 2 5 VAL 5 5 VAL VAL B .
B 2 6 LYS 6 6 LYS LYS B .
B 2 7 LEU 7 7 LEU LEU B .
B 2 8 VAL 8 8 VAL VAL B .
B 2 9 GLY 9 9 GLY GLY B .
B 2 10 PRO 10 10 PRO PRO B .
B 2 11 GLU 11 11 GLU GLU B .
B 2 12 GLY 12 12 GLY GLY B .
B 2 13 GLU 13 13 GLU GLU B .
B 2 14 GLU 14 14 GLU GLU B .
B 2 15 HIS 15 15 HIS HIS B .
B 2 16 GLU 16 16 GLU GLU B .
B 2 17 PHE 17 17 PHE PHE B .
B 2 18 ASP 18 18 ASP ASP B .
B 2 19 ALA 19 19 ALA ALA B .
B 2 20 PRO 20 20 PRO PRO B .
B 2 21 ASP 21 21 ASP ASP B .
B 2 22 ASP 22 22 ASP ASP B .
B 2 23 ALA 23 23 ALA ALA B .
B 2 24 TYR 24 24 TYR TYR B .
B 2 25 ILE 25 25 ILE ILE B .
B 2 26 LEU 26 26 LEU LEU B .
B 2 27 ASP 27 27 ASP ASP B .
B 2 28 ALA 28 28 ALA ALA B .
B 2 29 ALA 29 29 ALA ALA B .
B 2 30 GLU 30 30 GLU GLU B .
B 2 31 THR 31 31 THR THR B .
B 2 32 ALA 32 32 ALA ALA B .
B 2 33 GLY 33 33 GLY GLY B .
B 2 34 VAL 34 34 VAL VAL B .
B 2 35 GLU 35 35 GLU GLU B .
B 2 36 LEU 36 36 LEU LEU B .
B 2 37 PRO 37 37 PRO PRO B .
B 2 38 TYR 38 38 TYR TYR B .
B 2 39 SER 39 39 SER SER B .
B 2 40 CYS 40 40 CYS CYS B .
B 2 41 ARG 41 41 ARG ARG B .
B 2 42 ALA 42 42 ALA ALA B .
B 2 43 GLY 43 43 GLY GLY B .
B 2 44 ALA 44 44 ALA ALA B .
B 2 45 CYS 45 45 CYS CYS B .
B 2 46 SER 46 46 SER SER B .
B 2 47 THR 47 47 THR THR B .
B 2 48 CYS 48 48 CYS CYS B .
B 2 49 ALA 49 49 ALA ALA B .
B 2 50 GLY 50 50 GLY GLY B .
B 2 51 LYS 51 51 LYS LYS B .
B 2 52 ILE 52 52 ILE ILE B .
B 2 53 GLU 53 53 GLU GLU B .
B 2 54 SER 54 54 SER SER B .
B 2 55 GLY 55 55 GLY GLY B .
B 2 56 SER 56 56 SER SER B .
B 2 57 VAL 57 57 VAL VAL B .
B 2 58 ASP 58 58 ASP ASP B .
B 2 59 GLN 59 59 GLN GLN B .
B 2 60 SER 60 60 SER SER B .
B 2 61 ASP 61 61 ASP ASP B .
B 2 62 GLY 62 62 GLY GLY B .
B 2 63 SER 63 63 SER SER B .
B 2 64 PHE 64 64 PHE PHE B .
B 2 65 LEU 65 65 LEU LEU B .
B 2 66 ASP 66 66 ASP ASP B .
B 2 67 ASP 67 67 ASP ASP B .
B 2 68 GLY 68 68 GLY GLY B .
B 2 69 GLN 69 69 GLN GLN B .
B 2 70 GLN 70 70 GLN GLN B .
B 2 71 GLU 71 71 GLU GLU B .
B 2 72 GLU 72 72 GLU GLU B .
B 2 73 GLY 73 73 GLY GLY B .
B 2 74 TYR 74 74 TYR TYR B .
B 2 75 VAL 75 75 VAL VAL B .
B 2 76 LEU 76 76 LEU LEU B .
B 2 77 THR 77 77 THR THR B .
B 2 78 CYS 78 78 CYS CYS B .
B 2 79 VAL 79 79 VAL VAL B .
B 2 80 SER 80 80 SER SER B .
B 2 81 TYR 81 81 TYR TYR B .
B 2 82 PRO 82 82 PRO PRO B .
B 2 83 LYS 83 83 LYS LYS B .
B 2 84 SER 84 84 SER SER B .
B 2 85 ASP 85 85 ASP ASP B .
B 2 86 CYS 86 86 CYS CYS B .
B 2 87 VAL 87 87 VAL VAL B .
B 2 88 ILE 88 88 ILE ILE B .
B 2 89 HIS 89 89 HIS HIS B .
B 2 90 THR 90 90 THR THR B .
B 2 91 HIS 91 91 HIS HIS B .
B 2 92 LYS 92 92 LYS LYS B .
B 2 93 GLU 93 93 GLU GLU B .
B 2 94 GLY 94 94 GLY GLY B .
B 2 95 ASP 95 95 ASP ASP B .
B 2 96 LEU 96 96 LEU LEU B .
B 2 97 TYR 97 97 TYR TYR B .
#
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 3 FES 1 201 201 FES C .
D 4 HEM 1 301 301 HEM D .
#
#
loop_
#
#