HEADER UNKNOWN FUNCTION 23-FEB-24 9ARD TITLE STRUCTURE OF PYCSAR ECPYCC CYCLASE IMMUNOGLOBULIN-LIKE AGS-C DOMAIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: CYTIDYLATE CYCLASE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: CYCLIC CMP SYNTHASE,CCMP SYNTHASE,ECPYCC; COMPND 5 EC: 4.6.1.6; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 3 ORGANISM_TAXID: 562; SOURCE 4 GENE: PYCC, GA0132381_1285; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS PYCSAR, AGS-C, ANTIPHAGE DEFENSE, UNKNOWN FUNCTION EXPDTA X-RAY DIFFRACTION AUTHOR D.RICHMOND-BUCCOLA,P.J.KRANZUSCH REVDAT 3 24-JUL-24 9ARD 1 JRNL REVDAT 2 10-JUL-24 9ARD 1 JRNL REVDAT 1 19-JUN-24 9ARD 0 JRNL AUTH D.RICHMOND-BUCCOLA,S.J.HOBBS,J.M.GARCIA,H.TOYODA,J.GAO, JRNL AUTH 2 S.SHAO,A.S.Y.LEE,P.J.KRANZUSCH JRNL TITL A LARGE-SCALE TYPE I CBASS ANTIPHAGE SCREEN IDENTIFIES THE JRNL TITL 2 PHAGE PROHEAD PROTEASE AS A KEY DETERMINANT OF IMMUNE JRNL TITL 3 ACTIVATION AND EVASION. JRNL REF CELL HOST MICROBE V. 32 1074 2024 JRNL REFN ESSN 1934-6069 JRNL PMID 38917809 JRNL DOI 10.1016/J.CHOM.2024.05.021 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH P.V.AFONINE,R.W.GROSSE-KUNTSTLEVE,N.ECHOLS,J.J.HEADD, REMARK 1 AUTH 2 N.W.MORIARTY,M.MUSTYAKIMOV,T.C.TERWILLIGER,A.URZHUMTSEV, REMARK 1 AUTH 3 P.H.ZWART,P.D.ADAMS REMARK 1 TITL TOWARDS AUTOMATED CRYSTALLOGRAPHIC STRUCTURE REFINEMENT WITH REMARK 1 TITL 2 PHENIX.REFINE. REMARK 1 REF CELL HOST V. 68 352 2012 REMARK 1 REFN ISSN 0907-4449 REMARK 1 PMID 22505256 REMARK 1 DOI 10.1107/S0907444912001308 REMARK 2 REMARK 2 RESOLUTION. 1.63 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.19.2_4158 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.63 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 41.66 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.9 REMARK 3 NUMBER OF REFLECTIONS : 31319 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.195 REMARK 3 R VALUE (WORKING SET) : 0.194 REMARK 3 FREE R VALUE : 0.229 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.830 REMARK 3 FREE R VALUE TEST SET COUNT : 1512 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 41.6600 - 3.6200 0.99 2817 95 0.1639 0.1693 REMARK 3 2 3.6200 - 2.8700 1.00 2753 138 0.1842 0.2065 REMARK 3 3 2.8700 - 2.5100 0.99 2688 158 0.1978 0.2322 REMARK 3 4 2.5100 - 2.2800 0.99 2713 151 0.2027 0.2861 REMARK 3 5 2.2800 - 2.1200 1.00 2734 141 0.1917 0.2607 REMARK 3 6 2.1200 - 1.9900 1.00 2675 154 0.2021 0.2362 REMARK 3 7 1.9900 - 1.8900 0.98 2726 114 0.2062 0.2721 REMARK 3 8 1.8900 - 1.8100 0.99 2673 142 0.2376 0.2632 REMARK 3 9 1.8100 - 1.7400 0.99 2705 152 0.2597 0.2735 REMARK 3 10 1.7400 - 1.6800 1.00 2682 152 0.2894 0.3419 REMARK 3 11 1.6800 - 1.6300 0.96 2641 115 0.3218 0.3297 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.174 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 27.629 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 22.84 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 36.56 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.003 2255 REMARK 3 ANGLE : 0.575 3042 REMARK 3 CHIRALITY : 0.049 334 REMARK 3 PLANARITY : 0.005 394 REMARK 3 DIHEDRAL : 11.133 872 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 13 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 319 THROUGH 355 ) REMARK 3 ORIGIN FOR THE GROUP (A): 3.6516 9.4875 16.8010 REMARK 3 T TENSOR REMARK 3 T11: 0.4098 T22: 0.1872 REMARK 3 T33: 0.2081 T12: 0.0243 REMARK 3 T13: -0.0634 T23: 0.0118 REMARK 3 L TENSOR REMARK 3 L11: 2.1296 L22: 2.3042 REMARK 3 L33: 2.3568 L12: 0.1424 REMARK 3 L13: 0.0582 L23: 1.3765 REMARK 3 S TENSOR REMARK 3 S11: -0.0634 S12: 0.1492 S13: 0.2139 REMARK 3 S21: -0.3248 S22: -0.0351 S23: -0.0175 REMARK 3 S31: -0.2414 S32: -0.0232 S33: 0.0922 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 356 THROUGH 398 ) REMARK 3 ORIGIN FOR THE GROUP (A): -2.3384 -4.5755 23.2352 REMARK 3 T TENSOR REMARK 3 T11: 0.3525 T22: 0.1938 REMARK 3 T33: 0.2864 T12: -0.0299 REMARK 3 T13: -0.0325 T23: -0.0228 REMARK 3 L TENSOR REMARK 3 L11: 2.1892 L22: 3.8589 REMARK 3 L33: 3.8392 L12: -1.4842 REMARK 3 L13: 0.2698 L23: 2.4016 REMARK 3 S TENSOR REMARK 3 S11: 0.0531 S12: 0.1400 S13: -0.1923 REMARK 3 S21: 0.0794 S22: -0.3830 S23: 0.5428 REMARK 3 S31: 0.0430 S32: -0.5719 S33: 0.3272 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 399 THROUGH 411 ) REMARK 3 ORIGIN FOR THE GROUP (A): -2.7468 -3.9003 10.9649 REMARK 3 T TENSOR REMARK 3 T11: 0.6144 T22: 0.5562 REMARK 3 T33: 0.4080 T12: 0.0408 REMARK 3 T13: -0.1893 T23: -0.0173 REMARK 3 L TENSOR REMARK 3 L11: 5.2866 L22: 7.4155 REMARK 3 L33: 5.7078 L12: -1.7611 REMARK 3 L13: -3.4152 L23: 0.8716 REMARK 3 S TENSOR REMARK 3 S11: 0.2765 S12: 0.8909 S13: 0.1849 REMARK 3 S21: -1.2172 S22: -0.2580 S23: 0.9400 REMARK 3 S31: -0.3017 S32: 0.1358 S33: 0.0598 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 412 THROUGH 450 ) REMARK 3 ORIGIN FOR THE GROUP (A): 2.4002 0.6790 23.7043 REMARK 3 T TENSOR REMARK 3 T11: 0.3145 T22: 0.1357 REMARK 3 T33: 0.1591 T12: 0.0042 REMARK 3 T13: -0.0552 T23: -0.0160 REMARK 3 L TENSOR REMARK 3 L11: 2.0486 L22: 2.3962 REMARK 3 L33: 2.1473 L12: -0.7582 REMARK 3 L13: 0.3823 L23: 0.3563 REMARK 3 S TENSOR REMARK 3 S11: 0.0764 S12: -0.0147 S13: -0.0886 REMARK 3 S21: -0.0933 S22: -0.0769 S23: 0.2106 REMARK 3 S31: 0.1295 S32: -0.1271 S33: 0.0495 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 319 THROUGH 329 ) REMARK 3 ORIGIN FOR THE GROUP (A): -11.6376 10.0499 0.4042 REMARK 3 T TENSOR REMARK 3 T11: 0.4175 T22: 0.2120 REMARK 3 T33: 0.1970 T12: -0.0473 REMARK 3 T13: -0.0470 T23: -0.0479 REMARK 3 L TENSOR REMARK 3 L11: 2.8254 L22: 2.9401 REMARK 3 L33: 5.5209 L12: 0.2829 REMARK 3 L13: -3.7005 L23: -1.3511 REMARK 3 S TENSOR REMARK 3 S11: -0.0337 S12: -0.4569 S13: 0.5636 REMARK 3 S21: 0.4437 S22: -0.0242 S23: -0.0641 REMARK 3 S31: -0.4045 S32: 0.2997 S33: -0.0367 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 330 THROUGH 347 ) REMARK 3 ORIGIN FOR THE GROUP (A): -1.3312 8.0706 -6.4758 REMARK 3 T TENSOR REMARK 3 T11: 0.3198 T22: 0.3024 REMARK 3 T33: 0.2599 T12: -0.0949 REMARK 3 T13: -0.1009 T23: 0.0980 REMARK 3 L TENSOR REMARK 3 L11: 5.9485 L22: 4.4140 REMARK 3 L33: 4.9364 L12: -1.8104 REMARK 3 L13: 0.9044 L23: 1.7261 REMARK 3 S TENSOR REMARK 3 S11: -0.3284 S12: 0.0112 S13: 0.2130 REMARK 3 S21: 0.4009 S22: 0.0321 S23: -0.5278 REMARK 3 S31: -0.5534 S32: 0.9091 S33: 0.2227 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 348 THROUGH 356 ) REMARK 3 ORIGIN FOR THE GROUP (A): -11.3001 6.7570 2.9293 REMARK 3 T TENSOR REMARK 3 T11: 0.4271 T22: 0.2612 REMARK 3 T33: 0.2125 T12: 0.0333 REMARK 3 T13: -0.0991 T23: -0.0137 REMARK 3 L TENSOR REMARK 3 L11: 6.4334 L22: 4.0838 REMARK 3 L33: 4.6409 L12: -3.8936 REMARK 3 L13: -5.3375 L23: 2.7344 REMARK 3 S TENSOR REMARK 3 S11: -0.3434 S12: -0.6161 S13: 0.8119 REMARK 3 S21: 0.3595 S22: 0.3572 S23: -0.3061 REMARK 3 S31: -0.3201 S32: 0.5672 S33: 0.0730 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 357 THROUGH 363 ) REMARK 3 ORIGIN FOR THE GROUP (A): -28.4149 7.6201 11.9894 REMARK 3 T TENSOR REMARK 3 T11: 0.7127 T22: 0.7922 REMARK 3 T33: 0.4836 T12: 0.2182 REMARK 3 T13: -0.0688 T23: -0.2121 REMARK 3 L TENSOR REMARK 3 L11: 7.7646 L22: 6.8091 REMARK 3 L33: 0.9142 L12: 7.2782 REMARK 3 L13: 2.5338 L23: 2.3805 REMARK 3 S TENSOR REMARK 3 S11: -0.1571 S12: -1.9547 S13: 1.3400 REMARK 3 S21: -0.6557 S22: -1.2931 S23: 1.7510 REMARK 3 S31: 0.2970 S32: 0.2723 S33: 1.0016 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 364 THROUGH 390 ) REMARK 3 ORIGIN FOR THE GROUP (A): -15.6461 -5.2555 -4.3562 REMARK 3 T TENSOR REMARK 3 T11: 0.3556 T22: 0.1880 REMARK 3 T33: 0.1982 T12: 0.0160 REMARK 3 T13: -0.0317 T23: 0.0092 REMARK 3 L TENSOR REMARK 3 L11: 2.8773 L22: 1.7728 REMARK 3 L33: 3.6857 L12: -1.6057 REMARK 3 L13: -2.5665 L23: 2.5731 REMARK 3 S TENSOR REMARK 3 S11: -0.1347 S12: -0.2512 S13: -0.0733 REMARK 3 S21: 0.2982 S22: 0.0979 S23: 0.0631 REMARK 3 S31: 0.4656 S32: 0.2500 S33: 0.0859 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 391 THROUGH 398 ) REMARK 3 ORIGIN FOR THE GROUP (A): -19.8128 -3.9072 12.5702 REMARK 3 T TENSOR REMARK 3 T11: 0.6039 T22: 0.3416 REMARK 3 T33: 0.2609 T12: 0.0682 REMARK 3 T13: -0.0468 T23: 0.0304 REMARK 3 L TENSOR REMARK 3 L11: 8.1085 L22: 3.9754 REMARK 3 L33: 3.8958 L12: 1.3802 REMARK 3 L13: 0.4230 L23: 3.3928 REMARK 3 S TENSOR REMARK 3 S11: -0.1062 S12: -0.8665 S13: 0.6464 REMARK 3 S21: 0.1719 S22: -0.5440 S23: -0.0774 REMARK 3 S31: -1.0084 S32: -0.6226 S33: 0.4768 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 399 THROUGH 411 ) REMARK 3 ORIGIN FOR THE GROUP (A): -12.9293 2.7432 10.5904 REMARK 3 T TENSOR REMARK 3 T11: 0.8203 T22: 0.4064 REMARK 3 T33: 0.3957 T12: -0.0407 REMARK 3 T13: -0.1256 T23: 0.0565 REMARK 3 L TENSOR REMARK 3 L11: 8.3496 L22: 4.2474 REMARK 3 L33: 6.5260 L12: -0.6385 REMARK 3 L13: -2.0843 L23: 5.1109 REMARK 3 S TENSOR REMARK 3 S11: -0.2260 S12: -1.0079 S13: 0.0443 REMARK 3 S21: 1.0523 S22: 0.2095 S23: -0.3857 REMARK 3 S31: -0.3984 S32: 0.4469 S33: 0.2211 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 412 THROUGH 423 ) REMARK 3 ORIGIN FOR THE GROUP (A): -7.2966 0.2060 -1.6802 REMARK 3 T TENSOR REMARK 3 T11: 0.3212 T22: 0.2059 REMARK 3 T33: 0.2290 T12: -0.0213 REMARK 3 T13: -0.1039 T23: 0.0207 REMARK 3 L TENSOR REMARK 3 L11: 6.1100 L22: 5.2178 REMARK 3 L33: 5.0548 L12: -1.8806 REMARK 3 L13: -1.7582 L23: 2.0318 REMARK 3 S TENSOR REMARK 3 S11: -0.2526 S12: -0.4160 S13: -0.2468 REMARK 3 S21: 0.4763 S22: 0.0876 S23: -0.1051 REMARK 3 S31: 0.6453 S32: 0.3221 S33: 0.1308 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 424 THROUGH 450 ) REMARK 3 ORIGIN FOR THE GROUP (A): -19.5445 2.8507 -4.6970 REMARK 3 T TENSOR REMARK 3 T11: 0.2779 T22: 0.1630 REMARK 3 T33: 0.1519 T12: -0.0214 REMARK 3 T13: -0.0419 T23: -0.0055 REMARK 3 L TENSOR REMARK 3 L11: 4.0155 L22: 2.1772 REMARK 3 L33: 7.9445 L12: -2.6357 REMARK 3 L13: -4.1711 L23: 1.7435 REMARK 3 S TENSOR REMARK 3 S11: -0.1427 S12: -0.0697 S13: -0.2638 REMARK 3 S21: 0.2280 S22: -0.0437 S23: 0.1268 REMARK 3 S31: 0.0577 S32: -0.3512 S33: 0.2009 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 9ARD COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 26-FEB-24. REMARK 100 THE DEPOSITION ID IS D_1000281800. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 09-FEB-22 REMARK 200 TEMPERATURE (KELVIN) : 80 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 24-ID-C REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97918 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER2 X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 31359 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.630 REMARK 200 RESOLUTION RANGE LOW (A) : 63.590 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.1 REMARK 200 DATA REDUNDANCY : 4.500 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 10.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.63 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.65 REMARK 200 COMPLETENESS FOR SHELL (%) : 92.5 REMARK 200 DATA REDUNDANCY IN SHELL : 4.30 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 40.70 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.07 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M HEPES, PH 7.5 10% (W/V) PEG4000 REMARK 280 20% (W/V) ISOPROPANOL, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 291.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 31.79300 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OG SER B 404 O HOH B 501 1.85 REMARK 500 O HOH A 568 O HOH A 589 1.99 REMARK 500 NZ LYS B 398 O HOH B 502 2.05 REMARK 500 O HOH A 591 O HOH A 595 2.07 REMARK 500 O HOH A 503 O HOH A 555 2.13 REMARK 500 OG SER A 404 O HOH A 501 2.13 REMARK 500 O HOH B 542 O HOH B 553 2.15 REMARK 500 NH2 ARG B 341 O HOH B 503 2.15 REMARK 500 O HOH A 521 O HOH A 604 2.16 REMARK 500 O HOH B 600 O HOH B 601 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 559 O HOH B 527 1656 2.01 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 376 34.02 -96.62 REMARK 500 LEU A 421 -37.28 -140.95 REMARK 500 VAL B 339 45.29 37.33 REMARK 500 ASP B 409 95.09 -66.47 REMARK 500 LEU B 421 -20.42 -142.34 REMARK 500 REMARK 500 REMARK: NULL DBREF 9ARD A 320 450 UNP P0DV24 PYCC1_ECOLX 320 450 DBREF 9ARD B 320 450 UNP P0DV24 PYCC1_ECOLX 320 450 SEQADV 9ARD SER A 319 UNP P0DV24 EXPRESSION TAG SEQADV 9ARD SER B 319 UNP P0DV24 EXPRESSION TAG SEQRES 1 A 132 SER GLN PHE ASN PHE GLU CYS PHE VAL ILE GLU ASP ASN SEQRES 2 A 132 LYS GLU VAL LEU TYR ASN SER VAL SER ARG PHE LEU PRO SEQRES 3 A 132 LYS LYS ARG ARG LEU THR PHE LYS LEU SER ILE TYR PRO SEQRES 4 A 132 GLY PRO GLY ILE GLY ASP LEU LYS ILE ILE PHE CYS LYS SEQRES 5 A 132 ARG ASN HIS GLY GLN GLU ALA LYS ASP ASP LEU SER GLU SEQRES 6 A 132 ASP TYR SER ILE SER ILE GLU ASP ASN LYS LEU ILE ARG SEQRES 7 A 132 VAL LYS ASN ALA ASP ASN LEU SER LEU LEU ARG LYS ASP SEQRES 8 A 132 GLY CYS TYR VAL LEU THR VAL PRO GLU GLU THR LEU PHE SEQRES 9 A 132 ARG GLY LEU HIS THR MET GLU VAL ILE VAL ARG GLY ASN SEQRES 10 A 132 HIS GLU THR LEU PHE TYR ARG ASN ILE ILE GLY VAL TYR SEQRES 11 A 132 ILE LYS SEQRES 1 B 132 SER GLN PHE ASN PHE GLU CYS PHE VAL ILE GLU ASP ASN SEQRES 2 B 132 LYS GLU VAL LEU TYR ASN SER VAL SER ARG PHE LEU PRO SEQRES 3 B 132 LYS LYS ARG ARG LEU THR PHE LYS LEU SER ILE TYR PRO SEQRES 4 B 132 GLY PRO GLY ILE GLY ASP LEU LYS ILE ILE PHE CYS LYS SEQRES 5 B 132 ARG ASN HIS GLY GLN GLU ALA LYS ASP ASP LEU SER GLU SEQRES 6 B 132 ASP TYR SER ILE SER ILE GLU ASP ASN LYS LEU ILE ARG SEQRES 7 B 132 VAL LYS ASN ALA ASP ASN LEU SER LEU LEU ARG LYS ASP SEQRES 8 B 132 GLY CYS TYR VAL LEU THR VAL PRO GLU GLU THR LEU PHE SEQRES 9 B 132 ARG GLY LEU HIS THR MET GLU VAL ILE VAL ARG GLY ASN SEQRES 10 B 132 HIS GLU THR LEU PHE TYR ARG ASN ILE ILE GLY VAL TYR SEQRES 11 B 132 ILE LYS FORMUL 3 HOH *214(H2 O) HELIX 1 AA1 LYS A 378 SER A 382 5 5 HELIX 2 AA2 LYS B 378 SER B 382 5 5 HELIX 3 AA3 ASN B 435 GLU B 437 5 3 SHEET 1 AA1 5 LYS A 332 LEU A 335 0 SHEET 2 AA1 5 PHE A 321 GLU A 329 -1 N VAL A 327 O VAL A 334 SHEET 3 AA1 5 ARG A 348 ILE A 355 -1 O SER A 354 N ASN A 322 SHEET 4 AA1 5 TYR A 412 GLU A 419 -1 O GLU A 418 N LEU A 349 SHEET 5 AA1 5 SER A 404 ARG A 407 -1 N LEU A 406 O VAL A 413 SHEET 1 AA2 6 PHE A 342 LEU A 343 0 SHEET 2 AA2 6 THR A 438 ILE A 449 1 O TYR A 448 N LEU A 343 SHEET 3 AA2 6 GLY A 424 GLY A 434 -1 N HIS A 426 O VAL A 447 SHEET 4 AA2 6 LEU A 364 HIS A 373 -1 N LYS A 365 O ARG A 433 SHEET 5 AA2 6 GLU A 383 GLU A 390 -1 O GLU A 383 N LYS A 370 SHEET 6 AA2 6 LYS A 393 LYS A 398 -1 O ILE A 395 N SER A 388 SHEET 1 AA3 5 GLU B 333 LEU B 335 0 SHEET 2 AA3 5 GLN B 320 ILE B 328 -1 N VAL B 327 O VAL B 334 SHEET 3 AA3 5 ARG B 348 TYR B 356 -1 O TYR B 356 N GLN B 320 SHEET 4 AA3 5 CYS B 411 GLU B 419 -1 O TYR B 412 N ILE B 355 SHEET 5 AA3 5 SER B 404 LYS B 408 -1 N LYS B 408 O CYS B 411 SHEET 1 AA4 6 PHE B 342 LEU B 343 0 SHEET 2 AA4 6 LEU B 439 ILE B 449 1 O TYR B 448 N LEU B 343 SHEET 3 AA4 6 GLY B 424 ARG B 433 -1 N HIS B 426 O VAL B 447 SHEET 4 AA4 6 LEU B 364 HIS B 373 -1 N LYS B 365 O ARG B 433 SHEET 5 AA4 6 GLU B 383 GLU B 390 -1 O GLU B 383 N LYS B 370 SHEET 6 AA4 6 LYS B 393 LYS B 398 -1 O ILE B 395 N SER B 388 CRYST1 46.918 63.586 48.186 90.00 117.39 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.021314 0.000000 0.011044 0.00000 SCALE2 0.000000 0.015727 0.000000 0.00000 SCALE3 0.000000 0.000000 0.023373 0.00000