HEADER DNA BINDING PROTEIN/DNA 28-FEB-24 9AU5 TITLE TERNARY COMPLEX OF HUMAN DNA POLYMERASE THETA POLYMERASE DOMAIN WITH A TITLE 2 COGNATE C:G BASE PAIR COMPND MOL_ID: 1; COMPND 2 MOLECULE: DNA POLYMERASE THETA; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: DNA POLYMERASE ETA; COMPND 5 EC: 2.7.7.7; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: DNA (5'-D(*AP*GP*CP*TP*CP*TP*AP*CP*GP*GP*AP*TP*GP*C)-3'); COMPND 9 CHAIN: E; COMPND 10 ENGINEERED: YES; COMPND 11 MOL_ID: 3; COMPND 12 MOLECULE: DNA (5'-D(P*GP*CP*AP*TP*CP*CP*GP*TP*AP*GP*(2DA))-3'); COMPND 13 CHAIN: F; COMPND 14 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: POLQ, POLH; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI 'BL21-GOLD(DE3)PLYSS AG'; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 866768; SOURCE 8 MOL_ID: 2; SOURCE 9 SYNTHETIC: YES; SOURCE 10 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 11 ORGANISM_TAXID: 9606; SOURCE 12 MOL_ID: 3; SOURCE 13 SYNTHETIC: YES; SOURCE 14 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 15 ORGANISM_TAXID: 9606 KEYWDS DNA TRANSLESION SYNTHESIS, THETA-MEDIATED END JOINING, A-FAMILY DNA KEYWDS 2 POLYMERASE, DNA BINDING PROTEIN-DNA COMPLEX EXPDTA ELECTRON MICROSCOPY AUTHOR C.LI,Y.GAO REVDAT 2 12-MAR-25 9AU5 1 JRNL REVDAT 1 05-MAR-25 9AU5 0 JRNL AUTH C.LI,L.M.MAKSOUD,Y.GAO JRNL TITL STRUCTURAL BASIS OF ERROR-PRONE DNA SYNTHESIS BY DNA JRNL TITL 2 POLYMERASE THETA. JRNL REF NAT COMMUN V. 16 2063 2025 JRNL REFN ESSN 2041-1723 JRNL PMID 40021647 JRNL DOI 10.1038/S41467-025-57269-9 REMARK 2 REMARK 2 RESOLUTION. 3.11 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 SOFTWARE PACKAGES : PHENIX REMARK 3 RECONSTRUCTION SCHEMA : NULL REMARK 3 REMARK 3 EM MAP-MODEL FITTING AND REFINEMENT REMARK 3 PDB ENTRY : NULL REMARK 3 REFINEMENT SPACE : NULL REMARK 3 REFINEMENT PROTOCOL : NULL REMARK 3 REFINEMENT TARGET : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE : NULL REMARK 3 REMARK 3 FITTING PROCEDURE : NULL REMARK 3 REMARK 3 EM IMAGE RECONSTRUCTION STATISTICS REMARK 3 NOMINAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 ACTUAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 EFFECTIVE RESOLUTION (ANGSTROMS) : 3.110 REMARK 3 NUMBER OF PARTICLES : 231192 REMARK 3 CTF CORRECTION METHOD : PHASE FLIPPING AND AMPLITUDE REMARK 3 CORRECTION REMARK 3 REMARK 3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: NULL REMARK 3 REMARK 3 OTHER DETAILS: NULL REMARK 4 REMARK 4 9AU5 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 01-MAR-24. REMARK 100 THE DEPOSITION ID IS D_1000281930. REMARK 245 REMARK 245 EXPERIMENTAL DETAILS REMARK 245 RECONSTRUCTION METHOD : SINGLE PARTICLE REMARK 245 SPECIMEN TYPE : NULL REMARK 245 REMARK 245 ELECTRON MICROSCOPE SAMPLE REMARK 245 SAMPLE TYPE : PARTICLE REMARK 245 PARTICLE TYPE : POINT REMARK 245 NAME OF SAMPLE : TERNARY COMPLEX OF HUMAN DNA REMARK 245 POLYMERASE THETA POLYMERASE REMARK 245 DOMAIN WITH A COGNATE C:G BASE REMARK 245 PAIR REMARK 245 SAMPLE CONCENTRATION (MG ML-1) : 0.70 REMARK 245 SAMPLE SUPPORT DETAILS : NULL REMARK 245 SAMPLE VITRIFICATION DETAILS : NULL REMARK 245 SAMPLE BUFFER : NULL REMARK 245 PH : 7.60 REMARK 245 SAMPLE DETAILS : NULL REMARK 245 REMARK 245 DATA ACQUISITION REMARK 245 DATE OF EXPERIMENT : NULL REMARK 245 NUMBER OF MICROGRAPHS-IMAGES : NULL REMARK 245 TEMPERATURE (KELVIN) : NULL REMARK 245 MICROSCOPE MODEL : TFS KRIOS REMARK 245 DETECTOR TYPE : GATAN K3 (6K X 4K) REMARK 245 MINIMUM DEFOCUS (NM) : 800.00 REMARK 245 MAXIMUM DEFOCUS (NM) : 2000.00 REMARK 245 MINIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 MAXIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 NOMINAL CS : NULL REMARK 245 IMAGING MODE : BRIGHT FIELD REMARK 245 ELECTRON DOSE (ELECTRONS NM**-2) : 120.00 REMARK 245 ILLUMINATION MODE : FLOOD BEAM REMARK 245 NOMINAL MAGNIFICATION : NULL REMARK 245 CALIBRATED MAGNIFICATION : NULL REMARK 245 SOURCE : FIELD EMISSION GUN REMARK 245 ACCELERATION VOLTAGE (KV) : 300 REMARK 245 IMAGING DETAILS : NULL REMARK 247 REMARK 247 ELECTRON MICROSCOPY REMARK 247 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON REMARK 247 MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE REMARK 247 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES REMARK 247 ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION REMARK 247 OF THE STRUCTURE FACTORS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, E, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 1792 REMARK 465 PHE A 1793 REMARK 465 LYS A 1794 REMARK 465 ASP A 1795 REMARK 465 ASN A 1796 REMARK 465 SER A 1797 REMARK 465 PRO A 1798 REMARK 465 ILE A 1799 REMARK 465 SER A 1800 REMARK 465 ASP A 1801 REMARK 465 THR A 1802 REMARK 465 SER A 1803 REMARK 465 PHE A 1804 REMARK 465 SER A 1805 REMARK 465 LEU A 1806 REMARK 465 GLN A 1807 REMARK 465 LEU A 1808 REMARK 465 SER A 1809 REMARK 465 GLN A 1810 REMARK 465 ASP A 1811 REMARK 465 GLY A 1812 REMARK 465 LEU A 1813 REMARK 465 GLN A 1814 REMARK 465 LEU A 1815 REMARK 465 THR A 1816 REMARK 465 PRO A 1817 REMARK 465 ALA A 1818 REMARK 465 SER A 1819 REMARK 465 SER A 1820 REMARK 465 SER A 1821 REMARK 465 SER A 1822 REMARK 465 GLU A 1823 REMARK 465 LEU A 1862 REMARK 465 THR A 1863 REMARK 465 SER A 1864 REMARK 465 SER A 1865 REMARK 465 LYS A 1866 REMARK 465 THR A 1867 REMARK 465 ALA A 1868 REMARK 465 THR A 1869 REMARK 465 ILE A 1870 REMARK 465 GLY A 1871 REMARK 465 SER A 1872 REMARK 465 ARG A 1873 REMARK 465 PHE A 1874 REMARK 465 LYS A 1875 REMARK 465 GLN A 1876 REMARK 465 ALA A 1877 REMARK 465 SER A 1878 REMARK 465 SER A 1879 REMARK 465 PRO A 1880 REMARK 465 GLN A 1881 REMARK 465 GLU A 1882 REMARK 465 ILE A 1883 REMARK 465 PRO A 1884 REMARK 465 GLN A 1921 REMARK 465 LYS A 1922 REMARK 465 HIS A 1923 REMARK 465 SER A 1924 REMARK 465 GLU A 1925 REMARK 465 ILE A 1926 REMARK 465 SER A 1927 REMARK 465 ALA A 1928 REMARK 465 SER A 1929 REMARK 465 LEU A 1930 REMARK 465 VAL A 1931 REMARK 465 PRO A 1932 REMARK 465 PRO A 1933 REMARK 465 SER A 1934 REMARK 465 LEU A 1935 REMARK 465 GLU A 2148 REMARK 465 MET A 2149 REMARK 465 LYS A 2150 REMARK 465 ASN A 2151 REMARK 465 GLN A 2152 REMARK 465 GLY A 2153 REMARK 465 SER A 2154 REMARK 465 LYS A 2155 REMARK 465 LYS A 2156 REMARK 465 THR A 2157 REMARK 465 LEU A 2158 REMARK 465 GLY A 2159 REMARK 465 SER A 2160 REMARK 465 THR A 2161 REMARK 465 ARG A 2162 REMARK 465 ARG A 2163 REMARK 465 GLY A 2164 REMARK 465 ILE A 2165 REMARK 465 ASP A 2166 REMARK 465 ASN A 2167 REMARK 465 GLY A 2168 REMARK 465 ARG A 2169 REMARK 465 LYS A 2170 REMARK 465 LEU A 2171 REMARK 465 ARG A 2172 REMARK 465 LEU A 2173 REMARK 465 LEU A 2263 REMARK 465 VAL A 2264 REMARK 465 GLY A 2265 REMARK 465 GLU A 2266 REMARK 465 SER A 2267 REMARK 465 PRO A 2268 REMARK 465 PRO A 2269 REMARK 465 SER A 2270 REMARK 465 GLN A 2271 REMARK 465 ALA A 2272 REMARK 465 VAL A 2273 REMARK 465 GLY A 2274 REMARK 465 LYS A 2275 REMARK 465 GLY A 2276 REMARK 465 LEU A 2277 REMARK 465 LEU A 2278 REMARK 465 PRO A 2279 REMARK 465 MET A 2280 REMARK 465 GLY A 2281 REMARK 465 ARG A 2282 REMARK 465 GLY A 2283 REMARK 465 LYS A 2284 REMARK 465 TYR A 2285 REMARK 465 LYS A 2286 REMARK 465 LYS A 2287 REMARK 465 GLY A 2288 REMARK 465 PHE A 2289 REMARK 465 SER A 2290 REMARK 465 VAL A 2291 REMARK 465 ASN A 2292 REMARK 465 PRO A 2293 REMARK 465 ARG A 2294 REMARK 465 CYS A 2295 REMARK 465 GLN A 2296 REMARK 465 ALA A 2297 REMARK 465 GLN A 2298 REMARK 465 MET A 2299 REMARK 465 GLU A 2300 REMARK 465 GLU A 2301 REMARK 465 ARG A 2302 REMARK 465 ALA A 2303 REMARK 465 ALA A 2304 REMARK 465 ASP A 2305 REMARK 465 ARG A 2306 REMARK 465 GLY A 2307 REMARK 465 LEU A 2509 REMARK 465 GLN A 2510 REMARK 465 SER A 2511 REMARK 465 ASP A 2512 REMARK 465 GLN A 2513 REMARK 465 THR A 2514 REMARK 465 GLY A 2515 REMARK 465 LEU A 2516 REMARK 465 SER A 2517 REMARK 465 ARG A 2518 REMARK 465 LYS A 2519 REMARK 465 ARG A 2520 REMARK 465 LYS A 2521 REMARK 465 LEU A 2522 REMARK 465 GLN A 2523 REMARK 465 GLY A 2524 REMARK 465 MET A 2525 REMARK 465 DG E 1 REMARK 465 DC E 2 REMARK 465 DA E 3 REMARK 465 DG E 4 REMARK 465 DT E 5 REMARK 465 DC E 6 REMARK 465 DC E 21 REMARK 465 DT E 22 REMARK 465 DC E 23 REMARK 465 DA E 24 REMARK 465 DC E 25 REMARK 465 DA E 26 REMARK 465 DG E 27 REMARK 465 DC E 28 REMARK 465 DA E 29 REMARK 465 DT F 1 REMARK 465 DG F 2 REMARK 465 DC F 3 REMARK 465 DT F 4 REMARK 465 DG F 5 REMARK 465 DT F 6 REMARK 465 DG F 7 REMARK 465 DA F 8 REMARK 465 DG F 9 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A1860 CG CD NE CZ NH1 NH2 REMARK 470 SER A1861 OG REMARK 470 ASP A1896 CG OD1 OD2 REMARK 470 LYS A1942 CG CD CE NZ REMARK 470 THR A2025 OG1 CG2 REMARK 470 SER A2026 OG REMARK 470 GLN A2027 CG CD OE1 NE2 REMARK 470 ARG A2147 CG CD NE CZ NH1 NH2 REMARK 470 GLU A2257 CG CD OE1 OE2 REMARK 470 LYS A2259 CG CD CE NZ REMARK 470 GLU A2370 CG CD OE1 OE2 REMARK 470 GLU A2372 CG CD OE1 OE2 REMARK 470 DA E 7 P OP1 OP2 O5' C5' C4' O4' REMARK 470 DA E 7 C3' C2' C1' N9 C8 N7 C5 REMARK 470 DA E 7 C6 N6 N1 C2 N3 C4 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A1886 -6.08 68.23 REMARK 500 TRP A1907 55.60 -96.06 REMARK 500 ILE A2029 -56.35 70.98 REMARK 500 GLU A2039 -126.57 53.30 REMARK 500 THR A2096 -64.32 67.52 REMARK 500 LYS A2142 -115.70 57.64 REMARK 500 LEU A2143 75.03 53.06 REMARK 500 GLU A2217 59.61 -90.56 REMARK 500 LEU A2342 48.99 -93.70 REMARK 500 ASP A2357 70.06 58.55 REMARK 500 MET A2368 11.27 58.30 REMARK 500 TYR A2391 37.38 -98.53 REMARK 500 CYS A2527 156.86 67.48 REMARK 500 HIS A2539 -12.53 72.81 REMARK 500 ASP A2540 -2.72 -144.00 REMARK 500 ALA A2565 -172.64 -69.56 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A2602 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A2330 OD1 REMARK 620 2 ASP A2330 OD2 62.6 REMARK 620 3 TYR A2331 O 124.3 74.6 REMARK 620 4 ASP A2540 OD2 87.6 137.7 103.3 REMARK 620 5 DGT A2601 O1G 96.6 64.1 95.0 154.6 REMARK 620 6 DGT A2601 O2B 139.7 128.8 94.7 93.5 67.3 REMARK 620 7 DGT A2601 O2A 76.4 113.3 157.4 85.0 71.7 63.6 REMARK 620 N 1 2 3 4 5 6 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EMD-43855 RELATED DB: EMDB REMARK 900 TERNARY COMPLEX OF HUMAN DNA POLYMERASE THETA POLYMERASE DOMAIN REMARK 900 WITH A COGNATE G:C BASE PAIR DBREF 9AU5 A 1792 2590 UNP O75417 DPOLQ_HUMAN 1792 2590 DBREF 9AU5 E 1 29 PDB 9AU5 9AU5 1 29 DBREF 9AU5 F 1 20 PDB 9AU5 9AU5 1 20 SEQRES 1 A 799 GLY PHE LYS ASP ASN SER PRO ILE SER ASP THR SER PHE SEQRES 2 A 799 SER LEU GLN LEU SER GLN ASP GLY LEU GLN LEU THR PRO SEQRES 3 A 799 ALA SER SER SER SER GLU SER LEU SER ILE ILE ASP VAL SEQRES 4 A 799 ALA SER ASP GLN ASN LEU PHE GLN THR PHE ILE LYS GLU SEQRES 5 A 799 TRP ARG CYS LYS LYS ARG PHE SER ILE SER LEU ALA CYS SEQRES 6 A 799 GLU LYS ILE ARG SER LEU THR SER SER LYS THR ALA THR SEQRES 7 A 799 ILE GLY SER ARG PHE LYS GLN ALA SER SER PRO GLN GLU SEQRES 8 A 799 ILE PRO ILE ARG ASP ASP GLY PHE PRO ILE LYS GLY CYS SEQRES 9 A 799 ASP ASP THR LEU VAL VAL GLY LEU ALA VAL CYS TRP GLY SEQRES 10 A 799 GLY ARG ASP ALA TYR TYR PHE SER LEU GLN LYS GLU GLN SEQRES 11 A 799 LYS HIS SER GLU ILE SER ALA SER LEU VAL PRO PRO SER SEQRES 12 A 799 LEU ASP PRO SER LEU THR LEU LYS ASP ARG MET TRP TYR SEQRES 13 A 799 LEU GLN SER CYS LEU ARG LYS GLU SER ASP LYS GLU CYS SEQRES 14 A 799 SER VAL VAL ILE TYR ASP PHE ILE GLN SER TYR LYS ILE SEQRES 15 A 799 LEU LEU LEU SER CYS GLY ILE SER LEU GLU GLN SER TYR SEQRES 16 A 799 GLU ASP PRO LYS VAL ALA CYS TRP LEU LEU ASP PRO ASP SEQRES 17 A 799 SER GLN GLU PRO THR LEU HIS SER ILE VAL THR SER PHE SEQRES 18 A 799 LEU PRO HIS GLU LEU PRO LEU LEU GLU GLY MET GLU THR SEQRES 19 A 799 SER GLN GLY ILE GLN SER LEU GLY LEU ASN ALA GLY SER SEQRES 20 A 799 GLU HIS SER GLY ARG TYR ARG ALA SER VAL GLU SER ILE SEQRES 21 A 799 LEU ILE PHE ASN SER MET ASN GLN LEU ASN SER LEU LEU SEQRES 22 A 799 GLN LYS GLU ASN LEU GLN ASP VAL PHE ARG LYS VAL GLU SEQRES 23 A 799 MET PRO SER GLN TYR CYS LEU ALA LEU LEU GLU LEU ASN SEQRES 24 A 799 GLY ILE GLY PHE SER THR ALA GLU CYS GLU SER GLN LYS SEQRES 25 A 799 HIS ILE MET GLN ALA LYS LEU ASP ALA ILE GLU THR GLN SEQRES 26 A 799 ALA TYR GLN LEU ALA GLY HIS SER PHE SER PHE THR SER SEQRES 27 A 799 SER ASP ASP ILE ALA GLU VAL LEU PHE LEU GLU LEU LYS SEQRES 28 A 799 LEU PRO PRO ASN ARG GLU MET LYS ASN GLN GLY SER LYS SEQRES 29 A 799 LYS THR LEU GLY SER THR ARG ARG GLY ILE ASP ASN GLY SEQRES 30 A 799 ARG LYS LEU ARG LEU GLY ARG GLN PHE SER THR SER LYS SEQRES 31 A 799 ASP VAL LEU ASN LYS LEU LYS ALA LEU HIS PRO LEU PRO SEQRES 32 A 799 GLY LEU ILE LEU GLU TRP ARG ARG ILE THR ASN ALA ILE SEQRES 33 A 799 THR LYS VAL VAL PHE PRO LEU GLN ARG GLU LYS CYS LEU SEQRES 34 A 799 ASN PRO PHE LEU GLY MET GLU ARG ILE TYR PRO VAL SER SEQRES 35 A 799 GLN SER HIS THR ALA THR GLY ARG ILE THR PHE THR GLU SEQRES 36 A 799 PRO ASN ILE GLN ASN VAL PRO ARG ASP PHE GLU ILE LYS SEQRES 37 A 799 MET PRO THR LEU VAL GLY GLU SER PRO PRO SER GLN ALA SEQRES 38 A 799 VAL GLY LYS GLY LEU LEU PRO MET GLY ARG GLY LYS TYR SEQRES 39 A 799 LYS LYS GLY PHE SER VAL ASN PRO ARG CYS GLN ALA GLN SEQRES 40 A 799 MET GLU GLU ARG ALA ALA ASP ARG GLY MET PRO PHE SER SEQRES 41 A 799 ILE SER MET ARG HIS ALA PHE VAL PRO PHE PRO GLY GLY SEQRES 42 A 799 SER ILE LEU ALA ALA ASP TYR SER GLN LEU GLU LEU ARG SEQRES 43 A 799 ILE LEU ALA HIS LEU SER HIS ASP ARG ARG LEU ILE GLN SEQRES 44 A 799 VAL LEU ASN THR GLY ALA ASP VAL PHE ARG SER ILE ALA SEQRES 45 A 799 ALA GLU TRP LYS MET ILE GLU PRO GLU SER VAL GLY ASP SEQRES 46 A 799 ASP LEU ARG GLN GLN ALA LYS GLN ILE CYS TYR GLY ILE SEQRES 47 A 799 ILE TYR GLY MET GLY ALA LYS SER LEU GLY GLU GLN MET SEQRES 48 A 799 GLY ILE LYS GLU ASN ASP ALA ALA CYS TYR ILE ASP SER SEQRES 49 A 799 PHE LYS SER ARG TYR THR GLY ILE ASN GLN PHE MET THR SEQRES 50 A 799 GLU THR VAL LYS ASN CYS LYS ARG ASP GLY PHE VAL GLN SEQRES 51 A 799 THR ILE LEU GLY ARG ARG ARG TYR LEU PRO GLY ILE LYS SEQRES 52 A 799 ASP ASN ASN PRO TYR ARG LYS ALA HIS ALA GLU ARG GLN SEQRES 53 A 799 ALA ILE ASN THR ILE VAL GLN GLY SER ALA ALA ASP ILE SEQRES 54 A 799 VAL LYS ILE ALA THR VAL ASN ILE GLN LYS GLN LEU GLU SEQRES 55 A 799 THR PHE HIS SER THR PHE LYS SER HIS GLY HIS ARG GLU SEQRES 56 A 799 GLY MET LEU GLN SER ASP GLN THR GLY LEU SER ARG LYS SEQRES 57 A 799 ARG LYS LEU GLN GLY MET PHE CYS PRO ILE ARG GLY GLY SEQRES 58 A 799 PHE PHE ILE LEU GLN LEU HIS ASP GLU LEU LEU TYR GLU SEQRES 59 A 799 VAL ALA GLU GLU ASP VAL VAL GLN VAL ALA GLN ILE VAL SEQRES 60 A 799 LYS ASN GLU MET GLU SER ALA VAL LYS LEU SER VAL LYS SEQRES 61 A 799 LEU LYS VAL LYS VAL LYS ILE GLY ALA SER TRP GLY GLU SEQRES 62 A 799 LEU LYS ASP PHE ASP VAL SEQRES 1 E 29 DG DC DA DG DT DC DA DG DC DT DC DT DA SEQRES 2 E 29 DC DG DG DA DT DG DC DC DT DC DA DC DA SEQRES 3 E 29 DG DC DA SEQRES 1 F 20 DT DG DC DT DG DT DG DA DG DG DC DA DT SEQRES 2 F 20 DC DC DG DT DA DG 2DA HET 2DA F 20 20 HET DGT A2601 31 HET MG A2602 1 HETNAM 2DA 2',3'-DIDEOXYADENOSINE-5'-MONOPHOSPHATE HETNAM DGT 2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE HETNAM MG MAGNESIUM ION FORMUL 3 2DA C10 H14 N5 O5 P FORMUL 4 DGT C10 H16 N5 O13 P3 FORMUL 5 MG MG 2+ HELIX 1 AA1 ASP A 1833 LYS A 1847 1 15 HELIX 2 AA2 THR A 1940 LEU A 1952 1 13 HELIX 3 AA3 ASP A 1966 SER A 1977 1 12 HELIX 4 AA4 ASP A 1988 ASP A 1997 1 10 HELIX 5 AA5 THR A 2004 LEU A 2013 1 10 HELIX 6 AA6 PRO A 2014 GLU A 2021 5 8 HELIX 7 AA7 SER A 2041 ASN A 2068 1 28 HELIX 8 AA8 LEU A 2069 VAL A 2076 1 8 HELIX 9 AA9 VAL A 2076 GLY A 2091 1 16 HELIX 10 AB1 THR A 2096 GLY A 2122 1 27 HELIX 11 AB2 SER A 2129 PHE A 2138 1 10 HELIX 12 AB3 SER A 2180 LEU A 2187 1 8 HELIX 13 AB4 PRO A 2192 LYS A 2209 1 18 HELIX 14 AB5 VAL A 2210 GLU A 2217 1 8 HELIX 15 AB6 MET A 2314 PHE A 2318 5 5 HELIX 16 AB7 GLN A 2333 LEU A 2342 1 10 HELIX 17 AB8 ASP A 2345 THR A 2354 1 10 HELIX 18 AB9 ASP A 2357 MET A 2368 1 12 HELIX 19 AC1 GLY A 2375 TYR A 2391 1 17 HELIX 20 AC2 GLY A 2394 GLY A 2403 1 10 HELIX 21 AC3 LYS A 2405 TYR A 2420 1 16 HELIX 22 AC4 TYR A 2420 GLY A 2438 1 19 HELIX 23 AC5 PRO A 2451 ASP A 2455 5 5 HELIX 24 AC6 ASN A 2457 PHE A 2495 1 39 HELIX 25 AC7 SER A 2501 MET A 2508 1 8 HELIX 26 AC8 ASP A 2550 SER A 2564 1 15 SHEET 1 AA1 3 ARG A1849 PHE A1850 0 SHEET 2 AA1 3 SER A1961 VAL A1962 1 O SER A1961 N PHE A1850 SHEET 3 AA1 3 SER A1985 TYR A1986 1 O SER A1985 N VAL A1962 SHEET 1 AA2 3 SER A1853 LYS A1858 0 SHEET 2 AA2 3 THR A1898 ALA A1904 -1 O GLY A1902 N ALA A1855 SHEET 3 AA2 3 TYR A1914 SER A1916 -1 O PHE A1915 N LEU A1903 SHEET 1 AA3 2 VAL A2232 GLN A2234 0 SHEET 2 AA3 2 THR A2243 THR A2245 -1 O THR A2245 N VAL A2232 SHEET 1 AA4 5 PHE A2534 GLN A2537 0 SHEET 2 AA4 5 LEU A2542 ALA A2547 -1 O LEU A2543 N LEU A2536 SHEET 3 AA4 5 GLY A2324 TYR A2331 -1 N SER A2325 O VAL A2546 SHEET 4 AA4 5 VAL A2574 GLY A2579 -1 O LYS A2577 N ALA A2328 SHEET 5 AA4 5 LEU A2585 ASP A2587 -1 O LYS A2586 N ILE A2578 SHEET 1 AA5 2 PHE A2439 VAL A2440 0 SHEET 2 AA5 2 ARG A2448 TYR A2449 -1 O ARG A2448 N VAL A2440 LINK O3' DG F 19 P 2DA F 20 1555 1555 1.59 LINK OD1 ASP A2330 MG MG A2602 1555 1555 2.02 LINK OD2 ASP A2330 MG MG A2602 1555 1555 2.20 LINK O TYR A2331 MG MG A2602 1555 1555 2.32 LINK OD2 ASP A2540 MG MG A2602 1555 1555 2.03 LINK O1G DGT A2601 MG MG A2602 1555 1555 2.81 LINK O2B DGT A2601 MG MG A2602 1555 1555 2.01 LINK O2A DGT A2601 MG MG A2602 1555 1555 3.00 CISPEP 1 GLU A 2246 PRO A 2247 0 -7.03 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 TER 5054 VAL A2590 TER 5322 DC E 20 HETATM 5528 P 2DA F 20 110.921 97.845 96.324 1.00 25.45 P HETATM 5529 OP1 2DA F 20 111.842 96.736 96.671 1.00 27.75 O HETATM 5530 OP2 2DA F 20 110.424 98.073 94.938 1.00 22.86 O HETATM 5531 O5' 2DA F 20 109.633 97.769 97.235 1.00 24.25 O HETATM 5532 C5' 2DA F 20 109.746 97.469 98.608 1.00 21.05 C HETATM 5533 C4' 2DA F 20 108.403 97.765 99.205 1.00 16.65 C HETATM 5534 O4' 2DA F 20 107.772 98.676 98.364 1.00 13.87 O HETATM 5535 C3' 2DA F 20 107.540 96.554 99.124 1.00 16.88 C HETATM 5536 C2' 2DA F 20 106.253 97.100 98.581 1.00 17.44 C HETATM 5537 C1' 2DA F 20 106.418 98.569 98.540 1.00 13.79 C HETATM 5538 N9 2DA F 20 105.926 99.108 97.312 1.00 13.99 N HETATM 5539 C8 2DA F 20 106.683 99.249 96.257 1.00 16.49 C HETATM 5540 N7 2DA F 20 105.979 99.783 95.254 1.00 17.33 N HETATM 5541 C5 2DA F 20 104.759 99.984 95.688 1.00 16.60 C HETATM 5542 C6 2DA F 20 103.547 100.510 95.114 1.00 17.58 C HETATM 5543 N6 2DA F 20 103.526 100.953 93.853 1.00 18.28 N HETATM 5544 N1 2DA F 20 102.473 100.541 95.889 1.00 18.30 N HETATM 5545 C2 2DA F 20 102.509 100.109 97.144 1.00 19.12 C HETATM 5546 N3 2DA F 20 103.599 99.628 97.725 1.00 18.63 N HETATM 5547 C4 2DA F 20 104.731 99.537 97.049 1.00 15.67 C TER 5548 2DA F 20 HETATM 5549 PG DGT A2601 108.205 89.411 95.242 1.00 33.84 P HETATM 5550 O1G DGT A2601 108.889 89.944 96.473 1.00 34.07 O HETATM 5551 O2G DGT A2601 108.287 87.906 95.237 1.00 32.37 O HETATM 5552 O3G DGT A2601 108.899 89.968 94.024 1.00 30.25 O HETATM 5553 O3B DGT A2601 106.627 89.879 95.238 1.00 28.21 O HETATM 5554 PB DGT A2601 106.068 91.059 96.141 1.00 27.49 P HETATM 5555 O1B DGT A2601 104.481 91.037 96.124 1.00 21.32 O HETATM 5556 O2B DGT A2601 106.544 90.876 97.561 1.00 26.13 O HETATM 5557 O3A DGT A2601 106.581 92.445 95.554 1.00 34.50 O HETATM 5558 PA DGT A2601 107.182 93.646 96.405 1.00 27.93 P HETATM 5559 O1A DGT A2601 107.901 94.604 95.488 1.00 21.29 O HETATM 5560 O2A DGT A2601 108.154 93.125 97.434 1.00 25.68 O HETATM 5561 O5' DGT A2601 105.954 94.426 97.167 1.00 20.71 O HETATM 5562 C5' DGT A2601 105.412 93.801 98.291 1.00 20.59 C HETATM 5563 C4' DGT A2601 104.163 94.523 98.730 1.00 21.10 C HETATM 5564 O4' DGT A2601 103.949 95.689 97.892 1.00 18.96 O HETATM 5565 C3' DGT A2601 102.969 93.599 98.524 1.00 22.23 C HETATM 5566 O3' DGT A2601 102.063 93.742 99.634 1.00 26.64 O HETATM 5567 C2' DGT A2601 102.345 94.126 97.253 1.00 18.13 C HETATM 5568 C1' DGT A2601 102.644 95.607 97.343 1.00 16.29 C HETATM 5569 N9 DGT A2601 102.624 96.210 96.033 1.00 17.66 N HETATM 5570 C8 DGT A2601 103.836 95.915 95.522 1.00 19.08 C HETATM 5571 N7 DGT A2601 103.975 96.419 94.280 1.00 15.73 N HETATM 5572 C5 DGT A2601 102.830 97.040 94.009 1.00 15.90 C HETATM 5573 C6 DGT A2601 102.351 97.780 92.839 1.00 15.65 C HETATM 5574 O6 DGT A2601 103.035 97.941 91.832 1.00 17.78 O HETATM 5575 N1 DGT A2601 101.085 98.279 92.956 1.00 16.56 N HETATM 5576 C2 DGT A2601 100.288 98.125 94.058 1.00 19.33 C HETATM 5577 N2 DGT A2601 99.063 98.654 94.076 1.00 20.21 N HETATM 5578 N3 DGT A2601 100.717 97.457 95.120 1.00 18.98 N HETATM 5579 C4 DGT A2601 101.967 96.908 95.129 1.00 18.07 C HETATM 5580 MG MG A2602 107.896 90.592 99.016 1.00 27.25 MG CONECT 3125 5580 CONECT 3126 5580 CONECT 3130 5580 CONECT 4659 5580 CONECT 5514 5528 CONECT 5528 5514 5529 5530 5531 CONECT 5529 5528 CONECT 5530 5528 CONECT 5531 5528 5532 CONECT 5532 5531 5533 CONECT 5533 5532 5534 5535 CONECT 5534 5533 5537 CONECT 5535 5533 5536 CONECT 5536 5535 5537 CONECT 5537 5534 5536 5538 CONECT 5538 5537 5539 5547 CONECT 5539 5538 5540 CONECT 5540 5539 5541 CONECT 5541 5540 5542 5547 CONECT 5542 5541 5543 5544 CONECT 5543 5542 CONECT 5544 5542 5545 CONECT 5545 5544 5546 CONECT 5546 5545 5547 CONECT 5547 5538 5541 5546 CONECT 5549 5550 5551 5552 5553 CONECT 5550 5549 5580 CONECT 5551 5549 CONECT 5552 5549 CONECT 5553 5549 5554 CONECT 5554 5553 5555 5556 5557 CONECT 5555 5554 CONECT 5556 5554 5580 CONECT 5557 5554 5558 CONECT 5558 5557 5559 5560 5561 CONECT 5559 5558 CONECT 5560 5558 5580 CONECT 5561 5558 5562 CONECT 5562 5561 5563 CONECT 5563 5562 5564 5565 CONECT 5564 5563 5568 CONECT 5565 5563 5566 5567 CONECT 5566 5565 CONECT 5567 5565 5568 CONECT 5568 5564 5567 5569 CONECT 5569 5568 5570 5579 CONECT 5570 5569 5571 CONECT 5571 5570 5572 CONECT 5572 5571 5573 5579 CONECT 5573 5572 5574 5575 CONECT 5574 5573 CONECT 5575 5573 5576 CONECT 5576 5575 5577 5578 CONECT 5577 5576 CONECT 5578 5576 5579 CONECT 5579 5569 5572 5578 CONECT 5580 3125 3126 3130 4659 CONECT 5580 5550 5556 5560 MASTER 362 0 3 26 15 0 0 6 5577 3 58 67 END