HEADER DNA BINDING PROTEIN/DNA 28-FEB-24 9AU9 TITLE TERNARY COMPLEX OF HUMAN DNA POLYMERASE THETA POLYMERASE DOMAIN WITH A TITLE 2 MISMATCHED T:G BASE PAIR COMPND MOL_ID: 1; COMPND 2 MOLECULE: DNA POLYMERASE THETA; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: DNA POLYMERASE ETA; COMPND 5 EC: 2.7.7.7; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: DNA (5'- COMPND 9 D(P*TP*GP*AP*GP*GP*CP*AP*TP*CP*CP*GP*TP*AP*GP*(DOC))-3'); COMPND 10 CHAIN: C; COMPND 11 ENGINEERED: YES; COMPND 12 MOL_ID: 3; COMPND 13 MOLECULE: DNA (5'- COMPND 14 D(P*GP*TP*GP*CP*TP*AP*CP*GP*GP*AP*TP*GP*CP*CP*TP*CP*A)-3'); COMPND 15 CHAIN: D; COMPND 16 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: POLQ, POLH; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI 'BL21-GOLD(DE3)PLYSS AG'; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 866768; SOURCE 8 MOL_ID: 2; SOURCE 9 SYNTHETIC: YES; SOURCE 10 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 11 ORGANISM_TAXID: 9606; SOURCE 12 MOL_ID: 3; SOURCE 13 SYNTHETIC: YES; SOURCE 14 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 15 ORGANISM_TAXID: 9606 KEYWDS DNA TRANSLESION SYNTHESIS, THETA-MEDIATED END JOINING, A-FAMILY DNA KEYWDS 2 POLYMERASE, DNA BINDING PROTEIN-DNA COMPLEX EXPDTA ELECTRON MICROSCOPY AUTHOR C.LI,Y.GAO REVDAT 2 28-MAY-25 9AU9 1 JRNL REVDAT 1 05-MAR-25 9AU9 0 JRNL AUTH C.LI,L.M.MAKSOUD,Y.GAO JRNL TITL STRUCTURAL BASIS OF ERROR-PRONE DNA SYNTHESIS BY DNA JRNL TITL 2 POLYMERASE THETA. JRNL REF NAT COMMUN V. 16 2063 2025 JRNL REFN ESSN 2041-1723 JRNL PMID 40021647 JRNL DOI 10.1038/S41467-025-57269-9 REMARK 2 REMARK 2 RESOLUTION. 3.32 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 SOFTWARE PACKAGES : PHENIX REMARK 3 RECONSTRUCTION SCHEMA : NULL REMARK 3 REMARK 3 EM MAP-MODEL FITTING AND REFINEMENT REMARK 3 PDB ENTRY : NULL REMARK 3 REFINEMENT SPACE : NULL REMARK 3 REFINEMENT PROTOCOL : NULL REMARK 3 REFINEMENT TARGET : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE : NULL REMARK 3 REMARK 3 FITTING PROCEDURE : NULL REMARK 3 REMARK 3 EM IMAGE RECONSTRUCTION STATISTICS REMARK 3 NOMINAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 ACTUAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 EFFECTIVE RESOLUTION (ANGSTROMS) : 3.320 REMARK 3 NUMBER OF PARTICLES : 93767 REMARK 3 CTF CORRECTION METHOD : PHASE FLIPPING AND AMPLITUDE REMARK 3 CORRECTION REMARK 3 REMARK 3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: NULL REMARK 3 REMARK 3 OTHER DETAILS: NULL REMARK 4 REMARK 4 9AU9 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 01-MAR-24. REMARK 100 THE DEPOSITION ID IS D_1000281999. REMARK 245 REMARK 245 EXPERIMENTAL DETAILS REMARK 245 RECONSTRUCTION METHOD : SINGLE PARTICLE REMARK 245 SPECIMEN TYPE : NULL REMARK 245 REMARK 245 ELECTRON MICROSCOPE SAMPLE REMARK 245 SAMPLE TYPE : PARTICLE REMARK 245 PARTICLE TYPE : POINT REMARK 245 NAME OF SAMPLE : TERNARY COMPLEX OF HUMAN DNA REMARK 245 POLYMERASE THETA WITH DUPLEX REMARK 245 DNA AND INCOMING NUCLEOTIDE REMARK 245 SAMPLE CONCENTRATION (MG ML-1) : 0.70 REMARK 245 SAMPLE SUPPORT DETAILS : NULL REMARK 245 SAMPLE VITRIFICATION DETAILS : NULL REMARK 245 SAMPLE BUFFER : NULL REMARK 245 PH : 7.60 REMARK 245 SAMPLE DETAILS : NULL REMARK 245 REMARK 245 DATA ACQUISITION REMARK 245 DATE OF EXPERIMENT : NULL REMARK 245 NUMBER OF MICROGRAPHS-IMAGES : NULL REMARK 245 TEMPERATURE (KELVIN) : NULL REMARK 245 MICROSCOPE MODEL : TFS KRIOS REMARK 245 DETECTOR TYPE : GATAN K3 (6K X 4K) REMARK 245 MINIMUM DEFOCUS (NM) : 800.00 REMARK 245 MAXIMUM DEFOCUS (NM) : 2000.00 REMARK 245 MINIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 MAXIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 NOMINAL CS : NULL REMARK 245 IMAGING MODE : BRIGHT FIELD REMARK 245 ELECTRON DOSE (ELECTRONS NM**-2) : 120.00 REMARK 245 ILLUMINATION MODE : FLOOD BEAM REMARK 245 NOMINAL MAGNIFICATION : NULL REMARK 245 CALIBRATED MAGNIFICATION : NULL REMARK 245 SOURCE : FIELD EMISSION GUN REMARK 245 ACCELERATION VOLTAGE (KV) : 300 REMARK 245 IMAGING DETAILS : NULL REMARK 247 REMARK 247 ELECTRON MICROSCOPY REMARK 247 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON REMARK 247 MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE REMARK 247 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES REMARK 247 ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION REMARK 247 OF THE STRUCTURE FACTORS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 1792 REMARK 465 PHE A 1793 REMARK 465 LYS A 1794 REMARK 465 ASP A 1795 REMARK 465 ASN A 1796 REMARK 465 SER A 1797 REMARK 465 PRO A 1798 REMARK 465 ILE A 1799 REMARK 465 SER A 1800 REMARK 465 ASP A 1801 REMARK 465 THR A 1802 REMARK 465 SER A 1803 REMARK 465 PHE A 1804 REMARK 465 SER A 1805 REMARK 465 LEU A 1806 REMARK 465 GLN A 1807 REMARK 465 LEU A 1808 REMARK 465 SER A 1809 REMARK 465 GLN A 1810 REMARK 465 ASP A 1811 REMARK 465 GLY A 1812 REMARK 465 LEU A 1813 REMARK 465 GLN A 1814 REMARK 465 LEU A 1815 REMARK 465 THR A 1816 REMARK 465 PRO A 1817 REMARK 465 ALA A 1818 REMARK 465 SER A 1819 REMARK 465 SER A 1820 REMARK 465 SER A 1821 REMARK 465 SER A 1822 REMARK 465 GLU A 1823 REMARK 465 LEU A 1862 REMARK 465 THR A 1863 REMARK 465 SER A 1864 REMARK 465 SER A 1865 REMARK 465 LYS A 1866 REMARK 465 THR A 1867 REMARK 465 ALA A 1868 REMARK 465 THR A 1869 REMARK 465 ILE A 1870 REMARK 465 GLY A 1871 REMARK 465 SER A 1872 REMARK 465 ARG A 1873 REMARK 465 PHE A 1874 REMARK 465 LYS A 1875 REMARK 465 GLN A 1876 REMARK 465 ALA A 1877 REMARK 465 SER A 1878 REMARK 465 SER A 1879 REMARK 465 PRO A 1880 REMARK 465 GLN A 1881 REMARK 465 GLU A 1882 REMARK 465 ILE A 1883 REMARK 465 PRO A 1884 REMARK 465 GLN A 1921 REMARK 465 LYS A 1922 REMARK 465 HIS A 1923 REMARK 465 SER A 1924 REMARK 465 GLU A 1925 REMARK 465 ILE A 1926 REMARK 465 SER A 1927 REMARK 465 ALA A 1928 REMARK 465 SER A 1929 REMARK 465 LEU A 1930 REMARK 465 VAL A 1931 REMARK 465 PRO A 1932 REMARK 465 PRO A 1933 REMARK 465 SER A 1934 REMARK 465 LEU A 1935 REMARK 465 ASP A 1936 REMARK 465 MET A 2149 REMARK 465 LYS A 2150 REMARK 465 ASN A 2151 REMARK 465 GLN A 2152 REMARK 465 GLY A 2153 REMARK 465 SER A 2154 REMARK 465 LYS A 2155 REMARK 465 LYS A 2156 REMARK 465 THR A 2157 REMARK 465 LEU A 2158 REMARK 465 GLY A 2159 REMARK 465 SER A 2160 REMARK 465 THR A 2161 REMARK 465 ARG A 2162 REMARK 465 ARG A 2163 REMARK 465 GLY A 2164 REMARK 465 ILE A 2165 REMARK 465 ASP A 2166 REMARK 465 ASN A 2167 REMARK 465 GLY A 2168 REMARK 465 ARG A 2169 REMARK 465 LYS A 2170 REMARK 465 LEU A 2171 REMARK 465 ARG A 2172 REMARK 465 LEU A 2173 REMARK 465 THR A 2262 REMARK 465 LEU A 2263 REMARK 465 VAL A 2264 REMARK 465 GLY A 2265 REMARK 465 GLU A 2266 REMARK 465 SER A 2267 REMARK 465 PRO A 2268 REMARK 465 PRO A 2269 REMARK 465 SER A 2270 REMARK 465 GLN A 2271 REMARK 465 ALA A 2272 REMARK 465 VAL A 2273 REMARK 465 GLY A 2274 REMARK 465 LYS A 2275 REMARK 465 GLY A 2276 REMARK 465 LEU A 2277 REMARK 465 LEU A 2278 REMARK 465 PRO A 2279 REMARK 465 MET A 2280 REMARK 465 GLY A 2281 REMARK 465 ARG A 2282 REMARK 465 GLY A 2283 REMARK 465 LYS A 2284 REMARK 465 TYR A 2285 REMARK 465 LYS A 2286 REMARK 465 LYS A 2287 REMARK 465 GLY A 2288 REMARK 465 PHE A 2289 REMARK 465 SER A 2290 REMARK 465 VAL A 2291 REMARK 465 ASN A 2292 REMARK 465 PRO A 2293 REMARK 465 ARG A 2294 REMARK 465 CYS A 2295 REMARK 465 GLN A 2296 REMARK 465 ALA A 2297 REMARK 465 GLN A 2298 REMARK 465 MET A 2299 REMARK 465 GLU A 2300 REMARK 465 GLU A 2301 REMARK 465 ARG A 2302 REMARK 465 ALA A 2303 REMARK 465 ALA A 2304 REMARK 465 ASP A 2305 REMARK 465 ARG A 2306 REMARK 465 GLY A 2307 REMARK 465 LEU A 2509 REMARK 465 GLN A 2510 REMARK 465 SER A 2511 REMARK 465 ASP A 2512 REMARK 465 GLN A 2513 REMARK 465 THR A 2514 REMARK 465 GLY A 2515 REMARK 465 LEU A 2516 REMARK 465 SER A 2517 REMARK 465 ARG A 2518 REMARK 465 LYS A 2519 REMARK 465 ARG A 2520 REMARK 465 LYS A 2521 REMARK 465 LEU A 2522 REMARK 465 GLN A 2523 REMARK 465 GLY A 2524 REMARK 465 MET A 2525 REMARK 465 PHE A 2526 REMARK 465 DT C 1 REMARK 465 DG C 2 REMARK 465 DC C 3 REMARK 465 DT C 4 REMARK 465 DG C 5 REMARK 465 DG D 1 REMARK 465 DC D 2 REMARK 465 DA D 3 REMARK 465 DG D 4 REMARK 465 DT D 5 REMARK 465 DC D 6 REMARK 465 DA D 7 REMARK 465 DC D 25 REMARK 465 DA D 26 REMARK 465 DG D 27 REMARK 465 DC D 28 REMARK 465 DA D 29 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A1860 CG CD NE CZ NH1 NH2 REMARK 470 SER A1861 OG REMARK 470 ASP A1896 CG OD1 OD2 REMARK 470 LYS A1942 CG CD CE NZ REMARK 470 THR A2025 OG1 CG2 REMARK 470 SER A2026 OG REMARK 470 GLN A2027 CG CD OE1 NE2 REMARK 470 ARG A2147 CG CD NE CZ NH1 NH2 REMARK 470 GLU A2257 CG CD OE1 OE2 REMARK 470 LYS A2259 CG CD CE NZ REMARK 470 GLU A2370 CG CD OE1 OE2 REMARK 470 GLU A2372 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 DG C 19 C3' - O3' - P ANGL. DEV. = -9.9 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A1832 -1.14 69.12 REMARK 500 SER A1851 44.17 -140.23 REMARK 500 SER A1977 -60.07 -93.22 REMARK 500 PRO A1989 42.84 -77.53 REMARK 500 SER A2038 -6.70 71.39 REMARK 500 THR A2096 -2.79 69.39 REMARK 500 LEU A2141 58.08 -96.91 REMARK 500 LYS A2142 -132.03 57.00 REMARK 500 LEU A2143 73.61 54.33 REMARK 500 ASN A2205 45.50 -82.97 REMARK 500 ASN A2221 72.71 51.85 REMARK 500 GLU A2246 75.64 -159.04 REMARK 500 GLN A2333 77.34 48.83 REMARK 500 GLU A2372 51.77 -91.37 REMARK 500 ALA A2395 -125.98 61.30 REMARK 500 ASN A2456 -1.23 68.66 REMARK 500 THR A2498 -173.61 -171.27 REMARK 500 HIS A2539 -10.57 71.75 REMARK 500 ASP A2540 -4.76 -143.50 REMARK 500 GLU A2548 47.72 -84.06 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EMD-43875 RELATED DB: EMDB REMARK 900 TERNARY COMPLEX OF HUMAN DNA POLYMERASE THETA POLYMERASE DOMAIN REMARK 900 WITH A MISMATCHED G:T BASE PAIR DBREF 9AU9 A 1792 2590 UNP O75417 DPOLQ_HUMAN 1792 2590 DBREF 9AU9 C 1 20 PDB 9AU9 9AU9 1 20 DBREF 9AU9 D 1 29 PDB 9AU9 9AU9 1 29 SEQRES 1 A 799 GLY PHE LYS ASP ASN SER PRO ILE SER ASP THR SER PHE SEQRES 2 A 799 SER LEU GLN LEU SER GLN ASP GLY LEU GLN LEU THR PRO SEQRES 3 A 799 ALA SER SER SER SER GLU SER LEU SER ILE ILE ASP VAL SEQRES 4 A 799 ALA SER ASP GLN ASN LEU PHE GLN THR PHE ILE LYS GLU SEQRES 5 A 799 TRP ARG CYS LYS LYS ARG PHE SER ILE SER LEU ALA CYS SEQRES 6 A 799 GLU LYS ILE ARG SER LEU THR SER SER LYS THR ALA THR SEQRES 7 A 799 ILE GLY SER ARG PHE LYS GLN ALA SER SER PRO GLN GLU SEQRES 8 A 799 ILE PRO ILE ARG ASP ASP GLY PHE PRO ILE LYS GLY CYS SEQRES 9 A 799 ASP ASP THR LEU VAL VAL GLY LEU ALA VAL CYS TRP GLY SEQRES 10 A 799 GLY ARG ASP ALA TYR TYR PHE SER LEU GLN LYS GLU GLN SEQRES 11 A 799 LYS HIS SER GLU ILE SER ALA SER LEU VAL PRO PRO SER SEQRES 12 A 799 LEU ASP PRO SER LEU THR LEU LYS ASP ARG MET TRP TYR SEQRES 13 A 799 LEU GLN SER CYS LEU ARG LYS GLU SER ASP LYS GLU CYS SEQRES 14 A 799 SER VAL VAL ILE TYR ASP PHE ILE GLN SER TYR LYS ILE SEQRES 15 A 799 LEU LEU LEU SER CYS GLY ILE SER LEU GLU GLN SER TYR SEQRES 16 A 799 GLU ASP PRO LYS VAL ALA CYS TRP LEU LEU ASP PRO ASP SEQRES 17 A 799 SER GLN GLU PRO THR LEU HIS SER ILE VAL THR SER PHE SEQRES 18 A 799 LEU PRO HIS GLU LEU PRO LEU LEU GLU GLY MET GLU THR SEQRES 19 A 799 SER GLN GLY ILE GLN SER LEU GLY LEU ASN ALA GLY SER SEQRES 20 A 799 GLU HIS SER GLY ARG TYR ARG ALA SER VAL GLU SER ILE SEQRES 21 A 799 LEU ILE PHE ASN SER MET ASN GLN LEU ASN SER LEU LEU SEQRES 22 A 799 GLN LYS GLU ASN LEU GLN ASP VAL PHE ARG LYS VAL GLU SEQRES 23 A 799 MET PRO SER GLN TYR CYS LEU ALA LEU LEU GLU LEU ASN SEQRES 24 A 799 GLY ILE GLY PHE SER THR ALA GLU CYS GLU SER GLN LYS SEQRES 25 A 799 HIS ILE MET GLN ALA LYS LEU ASP ALA ILE GLU THR GLN SEQRES 26 A 799 ALA TYR GLN LEU ALA GLY HIS SER PHE SER PHE THR SER SEQRES 27 A 799 SER ASP ASP ILE ALA GLU VAL LEU PHE LEU GLU LEU LYS SEQRES 28 A 799 LEU PRO PRO ASN ARG GLU MET LYS ASN GLN GLY SER LYS SEQRES 29 A 799 LYS THR LEU GLY SER THR ARG ARG GLY ILE ASP ASN GLY SEQRES 30 A 799 ARG LYS LEU ARG LEU GLY ARG GLN PHE SER THR SER LYS SEQRES 31 A 799 ASP VAL LEU ASN LYS LEU LYS ALA LEU HIS PRO LEU PRO SEQRES 32 A 799 GLY LEU ILE LEU GLU TRP ARG ARG ILE THR ASN ALA ILE SEQRES 33 A 799 THR LYS VAL VAL PHE PRO LEU GLN ARG GLU LYS CYS LEU SEQRES 34 A 799 ASN PRO PHE LEU GLY MET GLU ARG ILE TYR PRO VAL SER SEQRES 35 A 799 GLN SER HIS THR ALA THR GLY ARG ILE THR PHE THR GLU SEQRES 36 A 799 PRO ASN ILE GLN ASN VAL PRO ARG ASP PHE GLU ILE LYS SEQRES 37 A 799 MET PRO THR LEU VAL GLY GLU SER PRO PRO SER GLN ALA SEQRES 38 A 799 VAL GLY LYS GLY LEU LEU PRO MET GLY ARG GLY LYS TYR SEQRES 39 A 799 LYS LYS GLY PHE SER VAL ASN PRO ARG CYS GLN ALA GLN SEQRES 40 A 799 MET GLU GLU ARG ALA ALA ASP ARG GLY MET PRO PHE SER SEQRES 41 A 799 ILE SER MET ARG HIS ALA PHE VAL PRO PHE PRO GLY GLY SEQRES 42 A 799 SER ILE LEU ALA ALA ASP TYR SER GLN LEU GLU LEU ARG SEQRES 43 A 799 ILE LEU ALA HIS LEU SER HIS ASP ARG ARG LEU ILE GLN SEQRES 44 A 799 VAL LEU ASN THR GLY ALA ASP VAL PHE ARG SER ILE ALA SEQRES 45 A 799 ALA GLU TRP LYS MET ILE GLU PRO GLU SER VAL GLY ASP SEQRES 46 A 799 ASP LEU ARG GLN GLN ALA LYS GLN ILE CYS TYR GLY ILE SEQRES 47 A 799 ILE TYR GLY MET GLY ALA LYS SER LEU GLY GLU GLN MET SEQRES 48 A 799 GLY ILE LYS GLU ASN ASP ALA ALA CYS TYR ILE ASP SER SEQRES 49 A 799 PHE LYS SER ARG TYR THR GLY ILE ASN GLN PHE MET THR SEQRES 50 A 799 GLU THR VAL LYS ASN CYS LYS ARG ASP GLY PHE VAL GLN SEQRES 51 A 799 THR ILE LEU GLY ARG ARG ARG TYR LEU PRO GLY ILE LYS SEQRES 52 A 799 ASP ASN ASN PRO TYR ARG LYS ALA HIS ALA GLU ARG GLN SEQRES 53 A 799 ALA ILE ASN THR ILE VAL GLN GLY SER ALA ALA ASP ILE SEQRES 54 A 799 VAL LYS ILE ALA THR VAL ASN ILE GLN LYS GLN LEU GLU SEQRES 55 A 799 THR PHE HIS SER THR PHE LYS SER HIS GLY HIS ARG GLU SEQRES 56 A 799 GLY MET LEU GLN SER ASP GLN THR GLY LEU SER ARG LYS SEQRES 57 A 799 ARG LYS LEU GLN GLY MET PHE CYS PRO ILE ARG GLY GLY SEQRES 58 A 799 PHE PHE ILE LEU GLN LEU HIS ASP GLU LEU LEU TYR GLU SEQRES 59 A 799 VAL ALA GLU GLU ASP VAL VAL GLN VAL ALA GLN ILE VAL SEQRES 60 A 799 LYS ASN GLU MET GLU SER ALA VAL LYS LEU SER VAL LYS SEQRES 61 A 799 LEU LYS VAL LYS VAL LYS ILE GLY ALA SER TRP GLY GLU SEQRES 62 A 799 LEU LYS ASP PHE ASP VAL SEQRES 1 C 20 DT DG DC DT DG DT DG DA DG DG DC DA DT SEQRES 2 C 20 DC DC DG DT DA DG DOC SEQRES 1 D 29 DG DC DA DG DT DC DA DG DT DG DC DT DA SEQRES 2 D 29 DC DG DG DA DT DG DC DC DT DC DA DC DA SEQRES 3 D 29 DG DC DA HET DOC C 20 18 HET DGT A2601 31 HETNAM DOC 2',3'-DIDEOXYCYTIDINE-5'-MONOPHOSPHATE HETNAM DGT 2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE FORMUL 2 DOC C9 H14 N3 O6 P FORMUL 4 DGT C10 H16 N5 O13 P3 HELIX 1 AA1 GLN A 1834 LYS A 1847 1 14 HELIX 2 AA2 THR A 1940 LEU A 1952 1 13 HELIX 3 AA3 ASP A 1966 SER A 1977 1 12 HELIX 4 AA4 LYS A 1990 ASP A 1997 1 8 HELIX 5 AA5 THR A 2004 LEU A 2013 1 10 HELIX 6 AA6 PRO A 2014 LEU A 2020 5 7 HELIX 7 AA7 GLU A 2024 GLY A 2028 5 5 HELIX 8 AA8 SER A 2041 ASN A 2068 1 28 HELIX 9 AA9 LEU A 2069 VAL A 2076 1 8 HELIX 10 AB1 GLU A 2077 GLY A 2091 1 15 HELIX 11 AB2 GLU A 2098 GLY A 2122 1 25 HELIX 12 AB3 SER A 2129 PHE A 2138 1 10 HELIX 13 AB4 SER A 2180 LYS A 2186 1 7 HELIX 14 AB5 HIS A 2191 THR A 2208 1 18 HELIX 15 AB6 VAL A 2210 GLU A 2217 1 8 HELIX 16 AB7 ASN A 2248 VAL A 2252 5 5 HELIX 17 AB8 SER A 2313 PHE A 2318 5 6 HELIX 18 AB9 GLN A 2333 HIS A 2344 1 12 HELIX 19 AC1 ASP A 2345 THR A 2354 1 10 HELIX 20 AC2 VAL A 2358 MET A 2368 1 11 HELIX 21 AC3 GLY A 2375 GLY A 2392 1 18 HELIX 22 AC4 ALA A 2395 GLY A 2403 1 9 HELIX 23 AC5 LYS A 2405 TYR A 2420 1 16 HELIX 24 AC6 TYR A 2420 GLY A 2438 1 19 HELIX 25 AC7 PRO A 2451 ASP A 2455 5 5 HELIX 26 AC8 ASN A 2457 PHE A 2495 1 39 HELIX 27 AC9 GLY A 2503 GLY A 2507 5 5 HELIX 28 AD1 ASP A 2550 SER A 2564 1 15 SHEET 1 AA1 3 ILE A1828 ASP A1829 0 SHEET 2 AA1 3 TYR A1913 SER A1916 1 O TYR A1914 N ILE A1828 SHEET 3 AA1 3 GLY A1902 VAL A1905 -1 N VAL A1905 O TYR A1913 SHEET 1 AA2 3 ARG A1849 PHE A1850 0 SHEET 2 AA2 3 SER A1961 VAL A1963 1 O VAL A1963 N PHE A1850 SHEET 3 AA2 3 SER A1985 GLU A1987 1 O GLU A1987 N VAL A1962 SHEET 1 AA3 3 CYS A1856 LYS A1858 0 SHEET 2 AA3 3 CYS A1895 VAL A1900 -1 O LEU A1899 N GLU A1857 SHEET 3 AA3 3 PHE A1890 ILE A1892 -1 N PHE A1890 O VAL A1900 SHEET 1 AA4 2 ILE A2092 GLY A2093 0 SHEET 2 AA4 2 ARG A2228 ILE A2229 -1 O ILE A2229 N ILE A2092 SHEET 1 AA5 2 SER A2233 GLN A2234 0 SHEET 2 AA5 2 THR A2243 PHE A2244 -1 O THR A2243 N GLN A2234 SHEET 1 AA6 5 GLY A2532 GLN A2537 0 SHEET 2 AA6 5 LEU A2542 ALA A2547 -1 O LEU A2543 N ILE A2535 SHEET 3 AA6 5 GLY A2324 TYR A2331 -1 N SER A2325 O VAL A2546 SHEET 4 AA6 5 VAL A2574 GLY A2579 -1 O LYS A2577 N ALA A2328 SHEET 5 AA6 5 LEU A2585 ASP A2587 -1 O LYS A2586 N ILE A2578 SHEET 1 AA7 2 PHE A2439 GLN A2441 0 SHEET 2 AA7 2 ARG A2447 TYR A2449 -1 O ARG A2448 N VAL A2440 LINK O3' DG C 19 P DOC C 20 1555 1555 1.60 CISPEP 1 GLU A 2246 PRO A 2247 0 -1.38 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 TER 5037 VAL A2590 HETATM 5328 N1 DOC C 20 105.818 115.822 110.470 1.00 85.54 N HETATM 5329 C2 DOC C 20 104.481 115.488 110.654 1.00 86.66 C HETATM 5330 N3 DOC C 20 103.967 115.513 111.898 1.00 90.70 N HETATM 5331 C4 DOC C 20 104.728 115.869 112.933 1.00 94.67 C HETATM 5332 C5 DOC C 20 106.084 116.229 112.758 1.00 90.89 C HETATM 5333 C6 DOC C 20 106.581 116.200 111.517 1.00 86.58 C HETATM 5334 O2 DOC C 20 103.810 115.165 109.668 1.00 85.42 O HETATM 5335 N4 DOC C 20 104.174 115.877 114.134 1.00101.83 N HETATM 5336 C1' DOC C 20 106.360 115.845 109.102 1.00 82.47 C HETATM 5337 C2' DOC C 20 106.341 117.230 108.482 1.00 86.93 C HETATM 5338 C3' DOC C 20 107.687 117.743 108.848 1.00 80.73 C HETATM 5339 C4' DOC C 20 108.530 116.521 108.633 1.00 76.59 C HETATM 5340 O4' DOC C 20 107.720 115.463 109.176 1.00 78.26 O HETATM 5341 C5' DOC C 20 109.869 116.516 109.304 1.00 78.75 C HETATM 5342 O5' DOC C 20 109.685 116.693 110.722 1.00 83.48 O HETATM 5343 P DOC C 20 110.969 116.740 111.661 1.00 78.50 P HETATM 5344 OP1 DOC C 20 111.916 117.741 111.087 1.00 76.11 O HETATM 5345 OP2 DOC C 20 110.484 117.078 113.030 1.00 86.78 O TER 5346 DOC C 20 TER 5695 DA D 24 HETATM 5696 PG DGT A2601 107.652 125.606 109.842 1.00127.26 P HETATM 5697 O1G DGT A2601 108.613 125.315 110.968 1.00129.96 O HETATM 5698 O2G DGT A2601 106.396 124.790 110.026 1.00117.00 O HETATM 5699 O3G DGT A2601 107.302 127.074 109.850 1.00118.65 O HETATM 5700 O3B DGT A2601 108.355 125.216 108.405 1.00117.22 O HETATM 5701 PB DGT A2601 109.035 123.810 108.111 1.00129.87 P HETATM 5702 O1B DGT A2601 109.980 123.929 106.839 1.00104.85 O HETATM 5703 O2B DGT A2601 109.861 123.381 109.300 1.00126.63 O HETATM 5704 O3A DGT A2601 107.896 122.737 107.847 1.00116.45 O HETATM 5705 PA DGT A2601 108.118 121.175 108.024 1.00114.98 P HETATM 5706 O1A DGT A2601 108.353 120.862 109.483 1.00110.95 O HETATM 5707 O2A DGT A2601 109.311 120.742 107.207 1.00 95.60 O HETATM 5708 O5' DGT A2601 106.773 120.378 107.514 1.00104.11 O HETATM 5709 C5' DGT A2601 105.642 120.481 108.326 1.00104.66 C HETATM 5710 C4' DGT A2601 104.481 119.764 107.681 1.00103.45 C HETATM 5711 O4' DGT A2601 103.947 118.811 108.632 1.00102.88 O HETATM 5712 C3' DGT A2601 103.358 120.745 107.355 1.00103.44 C HETATM 5713 O3' DGT A2601 102.722 120.338 106.129 1.00 97.66 O HETATM 5714 C2' DGT A2601 102.388 120.577 108.504 1.00105.24 C HETATM 5715 C1' DGT A2601 102.580 119.118 108.871 1.00104.37 C HETATM 5716 N9 DGT A2601 102.300 118.900 110.265 1.00106.21 N HETATM 5717 C8 DGT A2601 101.055 118.387 110.248 1.00105.96 C HETATM 5718 N7 DGT A2601 100.634 118.113 111.495 1.00104.29 N HETATM 5719 C5 DGT A2601 101.633 118.457 112.302 1.00103.02 C HETATM 5720 C6 DGT A2601 101.797 118.406 113.755 1.00105.87 C HETATM 5721 O6 DGT A2601 100.916 117.986 114.501 1.00105.35 O HETATM 5722 N1 DGT A2601 103.004 118.863 114.216 1.00113.55 N HETATM 5723 C2 DGT A2601 104.014 119.341 113.421 1.00112.63 C HETATM 5724 N2 DGT A2601 105.157 119.765 113.977 1.00122.47 N HETATM 5725 N3 DGT A2601 103.867 119.389 112.099 1.00103.51 N HETATM 5726 C4 DGT A2601 102.706 118.959 111.518 1.00103.78 C CONECT 5314 5343 CONECT 5328 5329 5333 5336 CONECT 5329 5328 5330 5334 CONECT 5330 5329 5331 CONECT 5331 5330 5332 5335 CONECT 5332 5331 5333 CONECT 5333 5328 5332 CONECT 5334 5329 CONECT 5335 5331 CONECT 5336 5328 5337 5340 CONECT 5337 5336 5338 CONECT 5338 5337 5339 CONECT 5339 5338 5340 5341 CONECT 5340 5336 5339 CONECT 5341 5339 5342 CONECT 5342 5341 5343 CONECT 5343 5314 5342 5344 5345 CONECT 5344 5343 CONECT 5345 5343 CONECT 5696 5697 5698 5699 5700 CONECT 5697 5696 CONECT 5698 5696 CONECT 5699 5696 CONECT 5700 5696 5701 CONECT 5701 5700 5702 5703 5704 CONECT 5702 5701 CONECT 5703 5701 CONECT 5704 5701 5705 CONECT 5705 5704 5706 5707 5708 CONECT 5706 5705 CONECT 5707 5705 CONECT 5708 5705 5709 CONECT 5709 5708 5710 CONECT 5710 5709 5711 5712 CONECT 5711 5710 5715 CONECT 5712 5710 5713 5714 CONECT 5713 5712 CONECT 5714 5712 5715 CONECT 5715 5711 5714 5716 CONECT 5716 5715 5717 5726 CONECT 5717 5716 5718 CONECT 5718 5717 5719 CONECT 5719 5718 5720 5726 CONECT 5720 5719 5721 5722 CONECT 5721 5720 CONECT 5722 5720 5723 CONECT 5723 5722 5724 5725 CONECT 5724 5723 CONECT 5725 5723 5726 CONECT 5726 5716 5719 5725 MASTER 360 0 2 28 20 0 0 6 5723 3 50 67 END