HEADER HYDROLASE 04-MAR-24 9AVS TITLE HUMAN ALPHA-GALACTOSIDASE A IN COMPLEX WITH SAPOSIN B COMPND MOL_ID: 1; COMPND 2 MOLECULE: ALPHA-GALACTOSIDASE A; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: ALPHA-D-GALACTOSIDASE A,ALPHA-D-GALACTOSIDE COMPND 5 GALACTOHYDROLASE,GALACTOSYLGALACTOSYLGLUCOSYLCERAMIDASE GLA, COMPND 6 MELIBIASE; COMPND 7 EC: 3.2.1.22; COMPND 8 ENGINEERED: YES; COMPND 9 MUTATION: YES; COMPND 10 OTHER_DETAILS: C-TERMINAL DOUBLE FLAG-TAG; COMPND 11 MOL_ID: 2; COMPND 12 MOLECULE: SAPOSIN-B; COMPND 13 CHAIN: C; COMPND 14 SYNONYM: CEREBROSIDE SULFATE ACTIVATOR,CSACT,DISPERSIN,SPHINGOLIPID COMPND 15 ACTIVATOR PROTEIN 1,SAP-1,SULFATIDE/GM1 ACTIVATOR; COMPND 16 ENGINEERED: YES; COMPND 17 OTHER_DETAILS: FRAGMENT CORRESPONDS TO RESIDUES 195-273 OF CANONICAL COMPND 18 ISOFORM P07602-1. SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: GLA; SOURCE 6 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 7108; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 10 ORGANISM_COMMON: HUMAN; SOURCE 11 ORGANISM_TAXID: 9606; SOURCE 12 GENE: PSAP, GLBA, SAP1; SOURCE 13 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 14 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS GALACTOSIDASE, GLA, SAPOSIN, SAPB, FABRY DISEASE, LYSOSOMAL, KEYWDS 2 HYDROLASE, ACTIVATOR PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR T.K.SAWYER,S.C.GARMAN REVDAT 2 24-APR-24 9AVS 1 JRNL REVDAT 1 17-APR-24 9AVS 0 JRNL AUTH T.K.SAWYER,E.ARAL,J.V.STAROS,C.E.BOBST,S.C.GARMAN JRNL TITL HUMAN SAPOSIN B LIGAND BINDING AND PRESENTATION TO JRNL TITL 2 ALPHA-GALACTOSIDASE A. JRNL REF BIORXIV 2024 JRNL REFN ISSN 2692-8205 JRNL PMID 38617236 JRNL DOI 10.1101/2024.04.04.584535 REMARK 2 REMARK 2 RESOLUTION. 3.53 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.20.1-4487 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.53 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 57.23 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.0 REMARK 3 NUMBER OF REFLECTIONS : 20423 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.242 REMARK 3 R VALUE (WORKING SET) : 0.241 REMARK 3 FREE R VALUE : 0.265 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.940 REMARK 3 FREE R VALUE TEST SET COUNT : 1009 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 57.2300 - 6.7500 0.98 2884 149 0.2091 0.2302 REMARK 3 2 6.7500 - 5.3600 0.98 2785 129 0.2489 0.2476 REMARK 3 3 5.3600 - 4.6800 1.00 2787 142 0.2351 0.2890 REMARK 3 4 4.6800 - 4.2500 1.00 2768 134 0.2228 0.2168 REMARK 3 5 4.2500 - 3.9500 0.98 2714 147 0.2539 0.2777 REMARK 3 6 3.9500 - 3.7200 1.00 2716 158 0.2907 0.3457 REMARK 3 7 3.7200 - 3.5300 1.00 2760 150 0.3018 0.3226 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.467 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 28.938 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 90.16 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 95.49 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.004 7324 REMARK 3 ANGLE : 0.725 9956 REMARK 3 CHIRALITY : 0.049 1106 REMARK 3 PLANARITY : 0.006 1254 REMARK 3 DIHEDRAL : 6.952 1098 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 9AVS COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 05-MAR-24. REMARK 100 THE DEPOSITION ID IS D_1000282015. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 24-NOV-19 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL9-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97946 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XIA2 REMARK 200 DATA SCALING SOFTWARE : XIA2 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 20451 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.530 REMARK 200 RESOLUTION RANGE LOW (A) : 57.230 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.0 REMARK 200 DATA REDUNDANCY : 12.90 REMARK 200 R MERGE (I) : 0.23700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 7.1200 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.53 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.66 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.8 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 1.05700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 70.59 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.18 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 500 NL OF PROTEIN (0.1 MM GLA PLUS REMARK 280 0.22 MM SAPB) WAS MIXED WITH 500 NL OF RESERVOIR SOLUTION (0.1 REMARK 280 MM TRIS PH 8.0, 1 M AMMONIUM SULFATE) AND EQUILIBRATED AGAINST REMARK 280 70 UL RESERVOIRS AT 20 C., VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 95.98350 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 95.98350 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 60.05800 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 71.28150 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 60.05800 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 71.28150 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 95.98350 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 60.05800 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 71.28150 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 95.98350 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 60.05800 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 71.28150 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, E, D, F, G, H REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ASP A 427 REMARK 465 LEU A 428 REMARK 465 LEU A 429 REMARK 465 ASP A 430 REMARK 465 TYR A 431 REMARK 465 LYS A 432 REMARK 465 ASP A 433 REMARK 465 ASP A 434 REMARK 465 ASP A 435 REMARK 465 ASP A 436 REMARK 465 LYS A 437 REMARK 465 ASP A 438 REMARK 465 TYR A 439 REMARK 465 LYS A 440 REMARK 465 ASP A 441 REMARK 465 ASP A 442 REMARK 465 ASP A 443 REMARK 465 ASP A 444 REMARK 465 LYS A 445 REMARK 465 LEU B 428 REMARK 465 LEU B 429 REMARK 465 ASP B 430 REMARK 465 TYR B 431 REMARK 465 LYS B 432 REMARK 465 ASP B 433 REMARK 465 ASP B 434 REMARK 465 ASP B 435 REMARK 465 ASP B 436 REMARK 465 LYS B 437 REMARK 465 ASP B 438 REMARK 465 TYR B 439 REMARK 465 LYS B 440 REMARK 465 ASP B 441 REMARK 465 ASP B 442 REMARK 465 ASP B 443 REMARK 465 ASP B 444 REMARK 465 LYS B 445 REMARK 465 GLY C -2 REMARK 465 ALA C -1 REMARK 465 SER C 0 REMARK 465 GLY C 1 REMARK 465 ASP C 2 REMARK 465 VAL C 3 REMARK 465 GLU C 79 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 118 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 178 CG CD OE1 OE2 REMARK 470 LYS A 314 CG CD CE NZ REMARK 470 LYS A 391 CG CD CE NZ REMARK 470 LYS A 393 CG CD CE NZ REMARK 470 MET A 421 CG SD CE REMARK 470 MET A 423 CG SD CE REMARK 470 GLU B 178 CG CD OE1 OE2 REMARK 470 ARG B 193 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 314 CG CD CE NZ REMARK 470 LYS B 393 CG CD CE NZ REMARK 470 MET B 423 CG SD CE REMARK 470 LYS B 426 CG CD CE NZ REMARK 470 ASP B 427 CG OD1 OD2 REMARK 470 GLU C 30 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 MET A 51 -146.08 60.20 REMARK 500 CYS A 52 64.18 -100.06 REMARK 500 PHE A 211 16.72 -140.07 REMARK 500 ASN A 228 -60.78 -91.72 REMARK 500 PRO A 265 46.87 -91.40 REMARK 500 ASP A 266 -148.98 58.92 REMARK 500 ASN A 272 -166.82 -126.87 REMARK 500 GLN A 321 37.38 -97.37 REMARK 500 ASN A 419 -158.49 -150.18 REMARK 500 LEU A 425 93.60 -69.31 REMARK 500 ASP B 33 52.92 -92.44 REMARK 500 MET B 51 -119.94 61.06 REMARK 500 ASP B 92 -159.41 -89.70 REMARK 500 ASN B 249 30.91 -96.96 REMARK 500 ASP B 266 -171.19 -175.53 REMARK 500 ASN B 272 -169.04 -103.61 REMARK 500 GLN B 321 33.19 -93.35 REMARK 500 GLU B 358 30.99 -98.88 REMARK 500 SER B 424 -8.78 71.08 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 9AXG RELATED DB: PDB REMARK 900 CONTAINS THE SAME SAPOSIN B PROTEIN COMPLEXED WITH REMARK 900 GLOBOTRIAOSYLCERAMIDE-NBD DBREF 9AVS A 32 429 UNP P06280 AGAL_HUMAN 32 429 DBREF 9AVS B 32 429 UNP P06280 AGAL_HUMAN 32 429 DBREF 9AVS C 1 79 UNP P07602 SAP_HUMAN 195 273 SEQADV 9AVS ALA A 170 UNP P06280 ASP 170 ENGINEERED MUTATION SEQADV 9AVS ASP A 430 UNP P06280 EXPRESSION TAG SEQADV 9AVS TYR A 431 UNP P06280 EXPRESSION TAG SEQADV 9AVS LYS A 432 UNP P06280 EXPRESSION TAG SEQADV 9AVS ASP A 433 UNP P06280 EXPRESSION TAG SEQADV 9AVS ASP A 434 UNP P06280 EXPRESSION TAG SEQADV 9AVS ASP A 435 UNP P06280 EXPRESSION TAG SEQADV 9AVS ASP A 436 UNP P06280 EXPRESSION TAG SEQADV 9AVS LYS A 437 UNP P06280 EXPRESSION TAG SEQADV 9AVS ASP A 438 UNP P06280 EXPRESSION TAG SEQADV 9AVS TYR A 439 UNP P06280 EXPRESSION TAG SEQADV 9AVS LYS A 440 UNP P06280 EXPRESSION TAG SEQADV 9AVS ASP A 441 UNP P06280 EXPRESSION TAG SEQADV 9AVS ASP A 442 UNP P06280 EXPRESSION TAG SEQADV 9AVS ASP A 443 UNP P06280 EXPRESSION TAG SEQADV 9AVS ASP A 444 UNP P06280 EXPRESSION TAG SEQADV 9AVS LYS A 445 UNP P06280 EXPRESSION TAG SEQADV 9AVS ALA B 170 UNP P06280 ASP 170 ENGINEERED MUTATION SEQADV 9AVS ASP B 430 UNP P06280 EXPRESSION TAG SEQADV 9AVS TYR B 431 UNP P06280 EXPRESSION TAG SEQADV 9AVS LYS B 432 UNP P06280 EXPRESSION TAG SEQADV 9AVS ASP B 433 UNP P06280 EXPRESSION TAG SEQADV 9AVS ASP B 434 UNP P06280 EXPRESSION TAG SEQADV 9AVS ASP B 435 UNP P06280 EXPRESSION TAG SEQADV 9AVS ASP B 436 UNP P06280 EXPRESSION TAG SEQADV 9AVS LYS B 437 UNP P06280 EXPRESSION TAG SEQADV 9AVS ASP B 438 UNP P06280 EXPRESSION TAG SEQADV 9AVS TYR B 439 UNP P06280 EXPRESSION TAG SEQADV 9AVS LYS B 440 UNP P06280 EXPRESSION TAG SEQADV 9AVS ASP B 441 UNP P06280 EXPRESSION TAG SEQADV 9AVS ASP B 442 UNP P06280 EXPRESSION TAG SEQADV 9AVS ASP B 443 UNP P06280 EXPRESSION TAG SEQADV 9AVS ASP B 444 UNP P06280 EXPRESSION TAG SEQADV 9AVS LYS B 445 UNP P06280 EXPRESSION TAG SEQADV 9AVS GLY C -2 UNP P07602 EXPRESSION TAG SEQADV 9AVS ALA C -1 UNP P07602 EXPRESSION TAG SEQADV 9AVS SER C 0 UNP P07602 EXPRESSION TAG SEQRES 1 A 414 LEU ASP ASN GLY LEU ALA ARG THR PRO THR MET GLY TRP SEQRES 2 A 414 LEU HIS TRP GLU ARG PHE MET CYS ASN LEU ASP CYS GLN SEQRES 3 A 414 GLU GLU PRO ASP SER CYS ILE SER GLU LYS LEU PHE MET SEQRES 4 A 414 GLU MET ALA GLU LEU MET VAL SER GLU GLY TRP LYS ASP SEQRES 5 A 414 ALA GLY TYR GLU TYR LEU CYS ILE ASP ASP CYS TRP MET SEQRES 6 A 414 ALA PRO GLN ARG ASP SER GLU GLY ARG LEU GLN ALA ASP SEQRES 7 A 414 PRO GLN ARG PHE PRO HIS GLY ILE ARG GLN LEU ALA ASN SEQRES 8 A 414 TYR VAL HIS SER LYS GLY LEU LYS LEU GLY ILE TYR ALA SEQRES 9 A 414 ASP VAL GLY ASN LYS THR CYS ALA GLY PHE PRO GLY SER SEQRES 10 A 414 PHE GLY TYR TYR ASP ILE ASP ALA GLN THR PHE ALA ASP SEQRES 11 A 414 TRP GLY VAL ASP LEU LEU LYS PHE ALA GLY CYS TYR CYS SEQRES 12 A 414 ASP SER LEU GLU ASN LEU ALA ASP GLY TYR LYS HIS MET SEQRES 13 A 414 SER LEU ALA LEU ASN ARG THR GLY ARG SER ILE VAL TYR SEQRES 14 A 414 SER CYS GLU TRP PRO LEU TYR MET TRP PRO PHE GLN LYS SEQRES 15 A 414 PRO ASN TYR THR GLU ILE ARG GLN TYR CYS ASN HIS TRP SEQRES 16 A 414 ARG ASN PHE ALA ASP ILE ASP ASP SER TRP LYS SER ILE SEQRES 17 A 414 LYS SER ILE LEU ASP TRP THR SER PHE ASN GLN GLU ARG SEQRES 18 A 414 ILE VAL ASP VAL ALA GLY PRO GLY GLY TRP ASN ASP PRO SEQRES 19 A 414 ASP MET LEU VAL ILE GLY ASN PHE GLY LEU SER TRP ASN SEQRES 20 A 414 GLN GLN VAL THR GLN MET ALA LEU TRP ALA ILE MET ALA SEQRES 21 A 414 ALA PRO LEU PHE MET SER ASN ASP LEU ARG HIS ILE SER SEQRES 22 A 414 PRO GLN ALA LYS ALA LEU LEU GLN ASP LYS ASP VAL ILE SEQRES 23 A 414 ALA ILE ASN GLN ASP PRO LEU GLY LYS GLN GLY TYR GLN SEQRES 24 A 414 LEU ARG GLN GLY ASP ASN PHE GLU VAL TRP GLU ARG PRO SEQRES 25 A 414 LEU SER GLY LEU ALA TRP ALA VAL ALA MET ILE ASN ARG SEQRES 26 A 414 GLN GLU ILE GLY GLY PRO ARG SER TYR THR ILE ALA VAL SEQRES 27 A 414 ALA SER LEU GLY LYS GLY VAL ALA CYS ASN PRO ALA CYS SEQRES 28 A 414 PHE ILE THR GLN LEU LEU PRO VAL LYS ARG LYS LEU GLY SEQRES 29 A 414 PHE TYR GLU TRP THR SER ARG LEU ARG SER HIS ILE ASN SEQRES 30 A 414 PRO THR GLY THR VAL LEU LEU GLN LEU GLU ASN THR MET SEQRES 31 A 414 GLN MET SER LEU LYS ASP LEU LEU ASP TYR LYS ASP ASP SEQRES 32 A 414 ASP ASP LYS ASP TYR LYS ASP ASP ASP ASP LYS SEQRES 1 B 414 LEU ASP ASN GLY LEU ALA ARG THR PRO THR MET GLY TRP SEQRES 2 B 414 LEU HIS TRP GLU ARG PHE MET CYS ASN LEU ASP CYS GLN SEQRES 3 B 414 GLU GLU PRO ASP SER CYS ILE SER GLU LYS LEU PHE MET SEQRES 4 B 414 GLU MET ALA GLU LEU MET VAL SER GLU GLY TRP LYS ASP SEQRES 5 B 414 ALA GLY TYR GLU TYR LEU CYS ILE ASP ASP CYS TRP MET SEQRES 6 B 414 ALA PRO GLN ARG ASP SER GLU GLY ARG LEU GLN ALA ASP SEQRES 7 B 414 PRO GLN ARG PHE PRO HIS GLY ILE ARG GLN LEU ALA ASN SEQRES 8 B 414 TYR VAL HIS SER LYS GLY LEU LYS LEU GLY ILE TYR ALA SEQRES 9 B 414 ASP VAL GLY ASN LYS THR CYS ALA GLY PHE PRO GLY SER SEQRES 10 B 414 PHE GLY TYR TYR ASP ILE ASP ALA GLN THR PHE ALA ASP SEQRES 11 B 414 TRP GLY VAL ASP LEU LEU LYS PHE ALA GLY CYS TYR CYS SEQRES 12 B 414 ASP SER LEU GLU ASN LEU ALA ASP GLY TYR LYS HIS MET SEQRES 13 B 414 SER LEU ALA LEU ASN ARG THR GLY ARG SER ILE VAL TYR SEQRES 14 B 414 SER CYS GLU TRP PRO LEU TYR MET TRP PRO PHE GLN LYS SEQRES 15 B 414 PRO ASN TYR THR GLU ILE ARG GLN TYR CYS ASN HIS TRP SEQRES 16 B 414 ARG ASN PHE ALA ASP ILE ASP ASP SER TRP LYS SER ILE SEQRES 17 B 414 LYS SER ILE LEU ASP TRP THR SER PHE ASN GLN GLU ARG SEQRES 18 B 414 ILE VAL ASP VAL ALA GLY PRO GLY GLY TRP ASN ASP PRO SEQRES 19 B 414 ASP MET LEU VAL ILE GLY ASN PHE GLY LEU SER TRP ASN SEQRES 20 B 414 GLN GLN VAL THR GLN MET ALA LEU TRP ALA ILE MET ALA SEQRES 21 B 414 ALA PRO LEU PHE MET SER ASN ASP LEU ARG HIS ILE SER SEQRES 22 B 414 PRO GLN ALA LYS ALA LEU LEU GLN ASP LYS ASP VAL ILE SEQRES 23 B 414 ALA ILE ASN GLN ASP PRO LEU GLY LYS GLN GLY TYR GLN SEQRES 24 B 414 LEU ARG GLN GLY ASP ASN PHE GLU VAL TRP GLU ARG PRO SEQRES 25 B 414 LEU SER GLY LEU ALA TRP ALA VAL ALA MET ILE ASN ARG SEQRES 26 B 414 GLN GLU ILE GLY GLY PRO ARG SER TYR THR ILE ALA VAL SEQRES 27 B 414 ALA SER LEU GLY LYS GLY VAL ALA CYS ASN PRO ALA CYS SEQRES 28 B 414 PHE ILE THR GLN LEU LEU PRO VAL LYS ARG LYS LEU GLY SEQRES 29 B 414 PHE TYR GLU TRP THR SER ARG LEU ARG SER HIS ILE ASN SEQRES 30 B 414 PRO THR GLY THR VAL LEU LEU GLN LEU GLU ASN THR MET SEQRES 31 B 414 GLN MET SER LEU LYS ASP LEU LEU ASP TYR LYS ASP ASP SEQRES 32 B 414 ASP ASP LYS ASP TYR LYS ASP ASP ASP ASP LYS SEQRES 1 C 82 GLY ALA SER GLY ASP VAL CYS GLN ASP CYS ILE GLN MET SEQRES 2 C 82 VAL THR ASP ILE GLN THR ALA VAL ARG THR ASN SER THR SEQRES 3 C 82 PHE VAL GLN ALA LEU VAL GLU HIS VAL LYS GLU GLU CYS SEQRES 4 C 82 ASP ARG LEU GLY PRO GLY MET ALA ASP ILE CYS LYS ASN SEQRES 5 C 82 TYR ILE SER GLN TYR SER GLU ILE ALA ILE GLN MET MET SEQRES 6 C 82 MET HIS MET GLN PRO LYS GLU ILE CYS ALA LEU VAL GLY SEQRES 7 C 82 PHE CYS ASP GLU HET NAG E 1 14 HET NAG E 2 14 HET BMA E 3 11 HET MAN E 4 11 HET FUC E 5 10 HET NAG D 1 14 HET NAG D 2 14 HET BMA D 3 11 HET MAN D 4 11 HET NAG F 1 14 HET NAG F 2 14 HET NAG G 1 14 HET NAG G 2 14 HET BMA G 3 11 HET MAN G 4 11 HET NAG H 1 14 HET NAG H 2 14 HET BMA H 3 11 HET MAN H 4 11 HET MAN H 5 11 HET SO4 A 501 5 HET SO4 A 502 5 HET SO4 A 503 5 HET SO4 A 504 5 HET SO4 A 505 5 HET SO4 B 501 5 HET SO4 B 502 5 HET SO4 B 503 5 HET NAG B 504 14 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM BMA BETA-D-MANNOPYRANOSE HETNAM MAN ALPHA-D-MANNOPYRANOSE HETNAM FUC ALPHA-L-FUCOPYRANOSE HETNAM SO4 SULFATE ION HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE HETSYN BMA BETA-D-MANNOSE; D-MANNOSE; MANNOSE HETSYN MAN ALPHA-D-MANNOSE; D-MANNOSE; MANNOSE HETSYN FUC ALPHA-L-FUCOSE; 6-DEOXY-ALPHA-L-GALACTOPYRANOSE; L- HETSYN 2 FUC FUCOSE; FUCOSE FORMUL 4 NAG 11(C8 H15 N O6) FORMUL 4 BMA 4(C6 H12 O6) FORMUL 4 MAN 5(C6 H12 O6) FORMUL 4 FUC C6 H12 O5 FORMUL 9 SO4 8(O4 S 2-) FORMUL 18 HOH *8(H2 O) HELIX 1 AA1 HIS A 46 MET A 51 1 6 HELIX 2 AA2 SER A 65 GLU A 79 1 15 HELIX 3 AA3 GLY A 80 GLY A 85 1 6 HELIX 4 AA4 GLY A 116 LYS A 127 1 12 HELIX 5 AA5 TYR A 151 GLY A 163 1 13 HELIX 6 AA6 SER A 176 ARG A 193 1 18 HELIX 7 AA7 ASN A 215 CYS A 223 1 9 HELIX 8 AA8 SER A 235 ASN A 249 1 15 HELIX 9 AA9 ASN A 249 VAL A 254 1 6 HELIX 10 AB1 SER A 276 MET A 290 1 15 HELIX 11 AB2 SER A 304 GLN A 312 1 9 HELIX 12 AB3 ASP A 313 GLN A 321 1 9 HELIX 13 AB4 ALA A 370 VAL A 376 5 7 HELIX 14 AB5 SER B 65 GLU B 79 1 15 HELIX 15 AB6 GLY B 80 GLY B 85 1 6 HELIX 16 AB7 GLY B 116 LYS B 127 1 12 HELIX 17 AB8 TYR B 151 GLY B 163 1 13 HELIX 18 AB9 SER B 176 GLY B 195 1 20 HELIX 19 AC1 GLU B 203 TRP B 209 1 7 HELIX 20 AC2 ASN B 215 CYS B 223 1 9 HELIX 21 AC3 SER B 235 ASN B 249 1 15 HELIX 22 AC4 ASN B 249 VAL B 254 1 6 HELIX 23 AC5 SER B 276 MET B 290 1 15 HELIX 24 AC6 SER B 304 GLN B 312 1 9 HELIX 25 AC7 ASP B 313 GLN B 321 1 9 HELIX 26 AC8 ALA B 370 VAL B 376 5 7 HELIX 27 AC9 GLN C 5 THR C 20 1 16 HELIX 28 AD1 PHE C 24 CYS C 36 1 13 HELIX 29 AD2 ASP C 37 GLY C 40 5 4 HELIX 30 AD3 MET C 43 GLN C 53 1 11 HELIX 31 AD4 SER C 55 MET C 65 1 11 HELIX 32 AD5 GLN C 66 VAL C 74 1 9 SHEET 1 AA1 8 TRP A 262 ASP A 264 0 SHEET 2 AA1 8 HIS A 225 ARG A 227 1 N TRP A 226 O ASP A 264 SHEET 3 AA1 8 VAL A 199 CYS A 202 1 N CYS A 202 O HIS A 225 SHEET 4 AA1 8 LEU A 166 ALA A 170 1 N LEU A 167 O VAL A 199 SHEET 5 AA1 8 LYS A 130 ASP A 136 1 N ALA A 135 O ALA A 170 SHEET 6 AA1 8 TYR A 88 LEU A 89 1 N LEU A 89 O LYS A 130 SHEET 7 AA1 8 GLY A 43 TRP A 44 1 N TRP A 44 O TYR A 88 SHEET 8 AA1 8 PHE A 295 MET A 296 1 O MET A 296 N GLY A 43 SHEET 1 AA2 6 TYR A 329 GLY A 334 0 SHEET 2 AA2 6 PHE A 337 LEU A 344 -1 O VAL A 339 N LEU A 331 SHEET 3 AA2 6 ALA A 348 ASN A 355 -1 O ILE A 354 N GLU A 338 SHEET 4 AA2 6 THR A 412 LEU A 417 -1 O LEU A 417 N TRP A 349 SHEET 5 AA2 6 ALA A 381 LEU A 388 -1 N LEU A 387 O LEU A 414 SHEET 6 AA2 6 ARG A 392 GLU A 398 -1 O LEU A 394 N ILE A 384 SHEET 1 AA3 2 ARG A 363 ALA A 368 0 SHEET 2 AA3 2 ARG A 402 ILE A 407 -1 O LEU A 403 N ILE A 367 SHEET 1 AA4 8 TRP B 262 ASP B 264 0 SHEET 2 AA4 8 HIS B 225 ARG B 227 1 N TRP B 226 O ASP B 264 SHEET 3 AA4 8 VAL B 199 CYS B 202 1 N CYS B 202 O HIS B 225 SHEET 4 AA4 8 LEU B 166 ALA B 170 1 N LEU B 167 O SER B 201 SHEET 5 AA4 8 LYS B 130 ASP B 136 1 N ALA B 135 O LYS B 168 SHEET 6 AA4 8 TYR B 88 LEU B 89 1 N LEU B 89 O LYS B 130 SHEET 7 AA4 8 MET B 42 TRP B 44 1 N TRP B 44 O TYR B 88 SHEET 8 AA4 8 LEU B 294 MET B 296 1 O LEU B 294 N GLY B 43 SHEET 1 AA5 6 TYR B 329 GLY B 334 0 SHEET 2 AA5 6 PHE B 337 PRO B 343 -1 O VAL B 339 N ARG B 332 SHEET 3 AA5 6 ALA B 348 ASN B 355 -1 O ALA B 352 N TRP B 340 SHEET 4 AA5 6 GLY B 411 GLU B 418 -1 O LEU B 417 N TRP B 349 SHEET 5 AA5 6 ALA B 381 LEU B 388 -1 N LEU B 387 O LEU B 414 SHEET 6 AA5 6 ARG B 392 GLU B 398 -1 O TYR B 397 N CYS B 382 SHEET 1 AA6 2 ARG B 363 ALA B 368 0 SHEET 2 AA6 2 ARG B 402 ILE B 407 -1 O ILE B 407 N ARG B 363 SSBOND 1 CYS A 52 CYS A 94 1555 1555 2.03 SSBOND 2 CYS A 56 CYS A 63 1555 1555 2.03 SSBOND 3 CYS A 142 CYS A 172 1555 1555 2.03 SSBOND 4 CYS A 202 CYS A 223 1555 1555 2.03 SSBOND 5 CYS A 378 CYS A 382 1555 1555 2.03 SSBOND 6 CYS B 52 CYS B 94 1555 1555 2.03 SSBOND 7 CYS B 56 CYS B 63 1555 1555 2.03 SSBOND 8 CYS B 142 CYS B 172 1555 1555 2.03 SSBOND 9 CYS B 202 CYS B 223 1555 1555 2.03 SSBOND 10 CYS B 378 CYS B 382 1555 1555 2.03 SSBOND 11 CYS C 4 CYS C 77 1555 1555 2.03 SSBOND 12 CYS C 7 CYS C 71 1555 1555 2.03 SSBOND 13 CYS C 36 CYS C 47 1555 1555 2.03 LINK ND2 ASN A 139 C1 NAG E 1 1555 1555 1.46 LINK ND2 ASN A 192 C1 NAG D 1 1555 1555 1.44 LINK ND2 ASN A 215 C1 NAG F 1 1555 1555 1.45 LINK ND2 ASN B 139 C1 NAG G 1 1555 1555 1.44 LINK ND2 ASN B 192 C1 NAG H 1 1555 1555 1.44 LINK ND2 ASN B 215 C1 NAG B 504 1555 1555 1.44 LINK O4 NAG E 1 C1 NAG E 2 1555 1555 1.45 LINK O6 NAG E 1 C1 FUC E 5 1555 1555 1.46 LINK O4 NAG E 2 C1 BMA E 3 1555 1555 1.45 LINK O3 BMA E 3 C1 MAN E 4 1555 1555 1.45 LINK O4 NAG D 1 C1 NAG D 2 1555 1555 1.44 LINK O4 NAG D 2 C1 BMA D 3 1555 1555 1.45 LINK O3 BMA D 3 C1 MAN D 4 1555 1555 1.45 LINK O4 NAG F 1 C1 NAG F 2 1555 1555 1.44 LINK O4 NAG G 1 C1 NAG G 2 1555 1555 1.45 LINK O4 NAG G 2 C1 BMA G 3 1555 1555 1.44 LINK O3 BMA G 3 C1 MAN G 4 1555 1555 1.44 LINK O4 NAG H 1 C1 NAG H 2 1555 1555 1.44 LINK O4 NAG H 2 C1 BMA H 3 1555 1555 1.45 LINK O3 BMA H 3 C1 MAN H 4 1555 1555 1.45 LINK O6 BMA H 3 C1 MAN H 5 1555 1555 1.45 CISPEP 1 ASN A 379 PRO A 380 0 -4.17 CISPEP 2 LEU A 388 PRO A 389 0 0.14 CISPEP 3 ASN B 379 PRO B 380 0 0.02 CISPEP 4 LEU B 388 PRO B 389 0 0.61 CRYST1 120.116 142.563 191.967 90.00 90.00 90.00 C 2 2 21 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008325 0.000000 0.000000 0.00000 SCALE2 0.000000 0.007014 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005209 0.00000