HEADER HYDROLASE 08-MAR-24 9AYT TITLE STRUCTURE OF THE QUORUM QUENCHING LACTONASE GCL BOUND TO N-HEXANOYL-L- TITLE 2 HOMOSERINE LACTONE COMPND MOL_ID: 1; COMPND 2 MOLECULE: GCL LACTONASE; COMPND 3 CHAIN: P, D; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PARAGEOBACILLUS CALDOXYLOSILYTICUS; SOURCE 3 ORGANISM_TAXID: 81408; SOURCE 4 GENE: GCA01S_030_00190; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS QUORUM SENSING, QUORUM QUENCHING, LACTONASE, METALLOENZYME, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR M.CORBELLA,J.A.BRAVO,A.O.DEMKIV,A.R.CALIXTO,K.SOMPIYACHOKE, AUTHOR 2 C.BERGONZI,S.C.L.KAMERLIN,M.ELIAS REVDAT 1 06-NOV-24 9AYT 0 JRNL AUTH M.CORBELLA,J.BRAVO,A.O.DEMKIV,A.R.CALIXTO,K.SOMPIYACHOKE, JRNL AUTH 2 C.BERGONZI,A.R.BROWNLESS,M.H.ELIAS,S.C.L.KAMERLIN JRNL TITL CATALYTIC REDUNDANCIES AND CONFORMATIONAL PLASTICITY DRIVES JRNL TITL 2 SELECTIVITY AND PROMISCUITY IN QUORUM QUENCHING LACTONASES. JRNL REF JACS AU V. 4 3519 2024 JRNL REFN ESSN 2691-3704 JRNL PMID 39328773 JRNL DOI 10.1021/JACSAU.4C00404 REMARK 2 REMARK 2 RESOLUTION. 2.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0425 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 76.17 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 55531 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.194 REMARK 3 R VALUE (WORKING SET) : 0.192 REMARK 3 FREE R VALUE : 0.220 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2923 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.10 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.16 REMARK 3 REFLECTION IN BIN (WORKING SET) : 4075 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.91 REMARK 3 BIN R VALUE (WORKING SET) : 0.3630 REMARK 3 BIN FREE R VALUE SET COUNT : 214 REMARK 3 BIN FREE R VALUE : 0.3720 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4492 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 166 REMARK 3 SOLVENT ATOMS : 214 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 42.56 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.01000 REMARK 3 B22 (A**2) : 0.01000 REMARK 3 B33 (A**2) : -0.02000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.155 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.142 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.113 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 4.440 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.960 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.947 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4947 ; 0.004 ; 0.012 REMARK 3 BOND LENGTHS OTHERS (A): 4544 ; 0.001 ; 0.016 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 6676 ; 0.687 ; 1.839 REMARK 3 BOND ANGLES OTHERS (DEGREES): 10483 ; 0.276 ; 1.779 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 587 ; 5.495 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 28 ; 2.181 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 812 ;13.744 ;10.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 676 ; 0.235 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 5899 ; 0.003 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 1153 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2324 ; 3.905 ; 4.019 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 2325 ; 3.905 ; 4.021 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2913 ; 4.771 ; 7.200 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 2914 ; 4.773 ; 7.201 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2623 ; 5.269 ; 4.698 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 2616 ; 5.254 ; 4.690 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 3752 ; 7.603 ; 8.267 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 5307 ; 8.806 ;40.430 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 5308 ; 8.805 ;40.430 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 9AYT COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 19-MAR-24. REMARK 100 THE DEPOSITION ID IS D_1000279093. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 04-NOV-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 23-ID-B REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.033199 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 58454 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.100 REMARK 200 RESOLUTION RANGE LOW (A) : 76.170 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 6.250 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 9.7500 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.10 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.20 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.330 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: REFMAC REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 67.33 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.76 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.0 - 1.25 M AMMONIUM SULFATE AND 0.1 REMARK 280 M SODIUM ACETATE PH 4.0 - 5.5, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 292K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: H 3 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 X+2/3,Y+1/3,Z+1/3 REMARK 290 5555 -Y+2/3,X-Y+1/3,Z+1/3 REMARK 290 6555 -X+Y+2/3,-X+1/3,Z+1/3 REMARK 290 7555 X+1/3,Y+2/3,Z+2/3 REMARK 290 8555 -Y+1/3,X-Y+2/3,Z+2/3 REMARK 290 9555 -X+Y+1/3,-X+2/3,Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 54.25000 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 31.32125 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 76.16667 REMARK 290 SMTRY1 5 -0.500000 -0.866025 0.000000 54.25000 REMARK 290 SMTRY2 5 0.866025 -0.500000 0.000000 31.32125 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 76.16667 REMARK 290 SMTRY1 6 -0.500000 0.866025 0.000000 54.25000 REMARK 290 SMTRY2 6 -0.866025 -0.500000 0.000000 31.32125 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 76.16667 REMARK 290 SMTRY1 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 62.64250 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 152.33333 REMARK 290 SMTRY1 8 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 8 0.866025 -0.500000 0.000000 62.64250 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 152.33333 REMARK 290 SMTRY1 9 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 -0.500000 0.000000 62.64250 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 152.33333 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: P REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: D REMARK 350 BIOMT1 2 -0.500000 0.866025 0.000000 54.25000 REMARK 350 BIOMT2 2 -0.866025 -0.500000 0.000000 93.96376 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: P REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 108.50000 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 TRP P -13 REMARK 465 SER P -12 REMARK 465 HIS P -11 REMARK 465 PRO P -10 REMARK 465 GLN P -9 REMARK 465 PHE P -8 REMARK 465 GLU P -7 REMARK 465 LYS P -6 REMARK 465 GLU P -5 REMARK 465 ASN P -4 REMARK 465 LEU P -3 REMARK 465 TYR P -2 REMARK 465 PHE P -1 REMARK 465 GLN P 0 REMARK 465 SER P 1 REMARK 465 MET P 2 REMARK 465 ALA P 3 REMARK 465 ASN P 4 REMARK 465 VAL P 5 REMARK 465 ILE P 6 REMARK 465 TRP D -13 REMARK 465 SER D -12 REMARK 465 HIS D -11 REMARK 465 PRO D -10 REMARK 465 GLN D -9 REMARK 465 PHE D -8 REMARK 465 GLU D -7 REMARK 465 LYS D -6 REMARK 465 GLU D -5 REMARK 465 ASN D -4 REMARK 465 LEU D -3 REMARK 465 TYR D -2 REMARK 465 PHE D -1 REMARK 465 GLN D 0 REMARK 465 SER D 1 REMARK 465 MET D 2 REMARK 465 ALA D 3 REMARK 465 ASN D 4 REMARK 465 VAL D 5 REMARK 465 ILE D 6 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O ILE P 237 O HOH P 401 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN P 32 75.91 -151.58 REMARK 500 ASP P 65 167.82 71.97 REMARK 500 SER P 67 -154.10 61.09 REMARK 500 ALA P 199 -166.11 -127.03 REMARK 500 SER P 219 -138.72 49.92 REMARK 500 HIS P 266 55.96 -142.70 REMARK 500 ASN D 32 75.93 -150.49 REMARK 500 ASP D 65 165.88 73.38 REMARK 500 SER D 67 -152.01 60.29 REMARK 500 SER D 219 -139.20 53.74 REMARK 500 HIS D 266 56.07 -145.90 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CO P 301 CO REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS P 118 NE2 REMARK 620 2 HIS P 120 ND1 97.4 REMARK 620 3 HIS P 198 NE2 108.8 92.0 REMARK 620 4 ASP P 220 OD2 88.2 168.0 96.3 REMARK 620 5 HL6 P 315 O1 163.9 97.8 76.1 76.0 REMARK 620 6 HOH P 410 O 106.2 101.3 140.4 66.8 65.3 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 FE P 302 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP P 122 OD2 REMARK 620 2 HIS P 123 NE2 85.5 REMARK 620 3 ASP P 220 OD2 153.3 89.8 REMARK 620 4 HIS P 266 NE2 92.8 97.2 113.9 REMARK 620 5 HL6 P 315 O2 100.4 169.6 81.1 91.1 REMARK 620 6 HOH P 410 O 83.6 97.0 70.9 165.0 75.3 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CO D 301 CO REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS D 118 NE2 REMARK 620 2 HIS D 120 ND1 98.9 REMARK 620 3 HIS D 198 NE2 109.4 93.2 REMARK 620 4 ASP D 220 OD2 87.3 168.3 94.0 REMARK 620 5 HL6 D 318 O1 161.4 90.1 86.1 81.2 REMARK 620 6 HOH D 401 O 105.4 99.4 140.5 69.3 56.8 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 FE D 302 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP D 122 OD2 REMARK 620 2 HIS D 123 NE2 85.7 REMARK 620 3 ASP D 220 OD2 152.2 90.2 REMARK 620 4 HIS D 266 NE2 93.2 96.7 114.6 REMARK 620 5 HL6 D 318 O2 102.3 165.2 76.9 95.3 REMARK 620 6 HOH D 401 O 82.9 97.1 70.3 165.3 71.9 REMARK 620 N 1 2 3 4 5 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 6N9I RELATED DB: PDB DBREF1 9AYT P 2 283 UNP A0A023DFE8_9BACI DBREF2 9AYT P A0A023DFE8 1 282 DBREF1 9AYT D 2 283 UNP A0A023DFE8_9BACI DBREF2 9AYT D A0A023DFE8 1 282 SEQADV 9AYT TRP P -13 UNP A0A023DFE EXPRESSION TAG SEQADV 9AYT SER P -12 UNP A0A023DFE EXPRESSION TAG SEQADV 9AYT HIS P -11 UNP A0A023DFE EXPRESSION TAG SEQADV 9AYT PRO P -10 UNP A0A023DFE EXPRESSION TAG SEQADV 9AYT GLN P -9 UNP A0A023DFE EXPRESSION TAG SEQADV 9AYT PHE P -8 UNP A0A023DFE EXPRESSION TAG SEQADV 9AYT GLU P -7 UNP A0A023DFE EXPRESSION TAG SEQADV 9AYT LYS P -6 UNP A0A023DFE EXPRESSION TAG SEQADV 9AYT GLU P -5 UNP A0A023DFE EXPRESSION TAG SEQADV 9AYT ASN P -4 UNP A0A023DFE EXPRESSION TAG SEQADV 9AYT LEU P -3 UNP A0A023DFE EXPRESSION TAG SEQADV 9AYT TYR P -2 UNP A0A023DFE EXPRESSION TAG SEQADV 9AYT PHE P -1 UNP A0A023DFE EXPRESSION TAG SEQADV 9AYT GLN P 0 UNP A0A023DFE EXPRESSION TAG SEQADV 9AYT SER P 1 UNP A0A023DFE EXPRESSION TAG SEQADV 9AYT TRP D -13 UNP A0A023DFE EXPRESSION TAG SEQADV 9AYT SER D -12 UNP A0A023DFE EXPRESSION TAG SEQADV 9AYT HIS D -11 UNP A0A023DFE EXPRESSION TAG SEQADV 9AYT PRO D -10 UNP A0A023DFE EXPRESSION TAG SEQADV 9AYT GLN D -9 UNP A0A023DFE EXPRESSION TAG SEQADV 9AYT PHE D -8 UNP A0A023DFE EXPRESSION TAG SEQADV 9AYT GLU D -7 UNP A0A023DFE EXPRESSION TAG SEQADV 9AYT LYS D -6 UNP A0A023DFE EXPRESSION TAG SEQADV 9AYT GLU D -5 UNP A0A023DFE EXPRESSION TAG SEQADV 9AYT ASN D -4 UNP A0A023DFE EXPRESSION TAG SEQADV 9AYT LEU D -3 UNP A0A023DFE EXPRESSION TAG SEQADV 9AYT TYR D -2 UNP A0A023DFE EXPRESSION TAG SEQADV 9AYT PHE D -1 UNP A0A023DFE EXPRESSION TAG SEQADV 9AYT GLN D 0 UNP A0A023DFE EXPRESSION TAG SEQADV 9AYT SER D 1 UNP A0A023DFE EXPRESSION TAG SEQRES 1 P 297 TRP SER HIS PRO GLN PHE GLU LYS GLU ASN LEU TYR PHE SEQRES 2 P 297 GLN SER MET ALA ASN VAL ILE LYS ALA ARG PRO LYS LEU SEQRES 3 P 297 TYR VAL MET ASP ASN GLY ARG MET ARG MET ASP LYS ASN SEQRES 4 P 297 TRP MET ILE ALA MET HIS ASN PRO ALA THR ILE HIS ASN SEQRES 5 P 297 PRO ASN ALA GLN THR GLU PHE VAL GLU PHE PRO ILE TYR SEQRES 6 P 297 THR VAL LEU ILE ASP HIS PRO GLU GLY LYS ILE LEU PHE SEQRES 7 P 297 ASP THR SER CYS ASN PRO ASN SER MET GLY PRO GLN GLY SEQRES 8 P 297 ARG TRP ALA GLU SER THR GLN GLN MET PHE PRO TRP THR SEQRES 9 P 297 ALA THR GLU GLU CYS TYR LEU HIS ASN ARG LEU GLU GLN SEQRES 10 P 297 LEU LYS VAL ARG PRO GLU ASP ILE ARG TYR VAL VAL ALA SEQRES 11 P 297 SER HIS LEU HIS LEU ASP HIS ALA GLY CYS LEU GLU MET SEQRES 12 P 297 PHE THR ASN ALA THR ILE ILE VAL HIS GLU ASP GLU PHE SEQRES 13 P 297 ASN GLY ALA LEU GLN CYS TYR ALA ARG ASN GLN LYS GLU SEQRES 14 P 297 GLY ALA TYR ILE TRP ALA ASP ILE ASP ALA TRP ILE LYS SEQRES 15 P 297 ASN ASN LEU GLN TRP ARG THR VAL LYS ARG HIS GLU ASP SEQRES 16 P 297 ASN ILE LEU LEU ALA GLU GLY VAL LYS VAL LEU ASN PHE SEQRES 17 P 297 GLY SER GLY HIS ALA TRP GLY MET LEU GLY LEU HIS VAL SEQRES 18 P 297 GLU LEU PRO GLU THR GLY GLY ILE ILE LEU ALA SER ASP SEQRES 19 P 297 ALA ILE TYR THR ALA GLU SER TYR GLY PRO PRO ILE LYS SEQRES 20 P 297 PRO PRO GLY ILE ILE TYR ASP SER LEU GLY TYR MET ASN SEQRES 21 P 297 THR VAL GLU ARG ILE ARG ARG ILE ALA GLN GLU THR LYS SEQRES 22 P 297 SER GLN VAL TRP PHE GLY HIS ASP ALA GLU GLN PHE LYS SEQRES 23 P 297 LYS PHE ARG LYS SER THR GLU GLY TYR TYR GLU SEQRES 1 D 297 TRP SER HIS PRO GLN PHE GLU LYS GLU ASN LEU TYR PHE SEQRES 2 D 297 GLN SER MET ALA ASN VAL ILE LYS ALA ARG PRO LYS LEU SEQRES 3 D 297 TYR VAL MET ASP ASN GLY ARG MET ARG MET ASP LYS ASN SEQRES 4 D 297 TRP MET ILE ALA MET HIS ASN PRO ALA THR ILE HIS ASN SEQRES 5 D 297 PRO ASN ALA GLN THR GLU PHE VAL GLU PHE PRO ILE TYR SEQRES 6 D 297 THR VAL LEU ILE ASP HIS PRO GLU GLY LYS ILE LEU PHE SEQRES 7 D 297 ASP THR SER CYS ASN PRO ASN SER MET GLY PRO GLN GLY SEQRES 8 D 297 ARG TRP ALA GLU SER THR GLN GLN MET PHE PRO TRP THR SEQRES 9 D 297 ALA THR GLU GLU CYS TYR LEU HIS ASN ARG LEU GLU GLN SEQRES 10 D 297 LEU LYS VAL ARG PRO GLU ASP ILE ARG TYR VAL VAL ALA SEQRES 11 D 297 SER HIS LEU HIS LEU ASP HIS ALA GLY CYS LEU GLU MET SEQRES 12 D 297 PHE THR ASN ALA THR ILE ILE VAL HIS GLU ASP GLU PHE SEQRES 13 D 297 ASN GLY ALA LEU GLN CYS TYR ALA ARG ASN GLN LYS GLU SEQRES 14 D 297 GLY ALA TYR ILE TRP ALA ASP ILE ASP ALA TRP ILE LYS SEQRES 15 D 297 ASN ASN LEU GLN TRP ARG THR VAL LYS ARG HIS GLU ASP SEQRES 16 D 297 ASN ILE LEU LEU ALA GLU GLY VAL LYS VAL LEU ASN PHE SEQRES 17 D 297 GLY SER GLY HIS ALA TRP GLY MET LEU GLY LEU HIS VAL SEQRES 18 D 297 GLU LEU PRO GLU THR GLY GLY ILE ILE LEU ALA SER ASP SEQRES 19 D 297 ALA ILE TYR THR ALA GLU SER TYR GLY PRO PRO ILE LYS SEQRES 20 D 297 PRO PRO GLY ILE ILE TYR ASP SER LEU GLY TYR MET ASN SEQRES 21 D 297 THR VAL GLU ARG ILE ARG ARG ILE ALA GLN GLU THR LYS SEQRES 22 D 297 SER GLN VAL TRP PHE GLY HIS ASP ALA GLU GLN PHE LYS SEQRES 23 D 297 LYS PHE ARG LYS SER THR GLU GLY TYR TYR GLU HET CO P 301 1 HET FE P 302 1 HET EDO P 303 4 HET EDO P 304 4 HET EDO P 305 4 HET EDO P 306 4 HET EDO P 307 4 HET EDO P 308 4 HET EDO P 309 4 HET EDO P 310 4 HET EDO P 311 4 HET ACT P 312 4 HET ACT P 313 4 HET ACT P 314 4 HET HL6 P 315 14 HET 1PE P 316 16 HET SO4 P 317 5 HET CO D 301 1 HET FE D 302 1 HET EDO D 303 4 HET EDO D 304 4 HET EDO D 305 4 HET EDO D 306 4 HET EDO D 307 4 HET EDO D 308 4 HET EDO D 309 4 HET EDO D 310 4 HET EDO D 311 4 HET ACT D 312 4 HET ACT D 313 4 HET ACT D 314 4 HET ACT D 315 4 HET ACT D 316 4 HET ACT D 317 4 HET HL6 D 318 14 HET SO4 D 319 5 HETNAM CO COBALT (II) ION HETNAM FE FE (III) ION HETNAM EDO 1,2-ETHANEDIOL HETNAM ACT ACETATE ION HETNAM HL6 N-[(3S)-2-OXOTETRAHYDROFURAN-3-YL]HEXANAMIDE HETNAM 1PE PENTAETHYLENE GLYCOL HETNAM SO4 SULFATE ION HETSYN EDO ETHYLENE GLYCOL HETSYN HL6 N-HEXANOYL-L-HOMOSERINE LACTONE HETSYN 1PE PEG400 FORMUL 3 CO 2(CO 2+) FORMUL 4 FE 2(FE 3+) FORMUL 5 EDO 18(C2 H6 O2) FORMUL 14 ACT 9(C2 H3 O2 1-) FORMUL 17 HL6 2(C10 H17 N O3) FORMUL 18 1PE C10 H22 O6 FORMUL 19 SO4 2(O4 S 2-) FORMUL 39 HOH *214(H2 O) HELIX 1 AA1 LYS P 24 ILE P 28 1 5 HELIX 2 AA2 ALA P 80 PHE P 87 1 8 HELIX 3 AA3 THR P 92 CYS P 95 5 4 HELIX 4 AA4 TYR P 96 GLN P 103 1 8 HELIX 5 AA5 ARG P 107 GLU P 109 5 3 HELIX 6 AA6 CYS P 126 PHE P 130 5 5 HELIX 7 AA7 GLU P 139 ARG P 151 1 13 HELIX 8 AA8 ILE P 159 ASN P 169 1 11 HELIX 9 AA9 ASP P 220 ILE P 222 5 3 HELIX 10 AB1 THR P 224 GLY P 229 1 6 HELIX 11 AB2 ASP P 240 LYS P 259 1 20 HELIX 12 AB3 ASP P 267 PHE P 274 1 8 HELIX 13 AB4 LYS D 24 ILE D 28 1 5 HELIX 14 AB5 ALA D 80 PHE D 87 1 8 HELIX 15 AB6 THR D 92 CYS D 95 5 4 HELIX 16 AB7 TYR D 96 GLN D 103 1 8 HELIX 17 AB8 ARG D 107 GLU D 109 5 3 HELIX 18 AB9 CYS D 126 PHE D 130 5 5 HELIX 19 AC1 GLU D 139 ARG D 151 1 13 HELIX 20 AC2 ILE D 159 ASN D 169 1 11 HELIX 21 AC3 ASP D 220 ILE D 222 5 3 HELIX 22 AC4 THR D 224 GLY D 229 1 6 HELIX 23 AC5 ASP D 240 LYS D 259 1 20 HELIX 24 AC6 ASP D 267 PHE D 274 1 8 SHEET 1 AA1 7 TRP P 89 THR P 90 0 SHEET 2 AA1 7 LYS P 11 ASP P 23 -1 N ARG P 19 O THR P 90 SHEET 3 AA1 7 PHE P 45 HIS P 57 -1 O ASP P 56 N LYS P 11 SHEET 4 AA1 7 GLY P 60 PHE P 64 -1 O ILE P 62 N ILE P 55 SHEET 5 AA1 7 ILE P 111 VAL P 115 1 O VAL P 115 N LEU P 63 SHEET 6 AA1 7 THR P 134 HIS P 138 1 O ILE P 136 N VAL P 114 SHEET 7 AA1 7 GLN P 172 VAL P 176 1 O GLN P 172 N ILE P 135 SHEET 1 AA2 5 ILE P 183 ALA P 186 0 SHEET 2 AA2 5 VAL P 189 GLY P 195 -1 O VAL P 191 N ILE P 183 SHEET 3 AA2 5 MET P 202 LEU P 209 -1 O HIS P 206 N LYS P 190 SHEET 4 AA2 5 GLY P 213 SER P 219 -1 O GLY P 213 N LEU P 209 SHEET 5 AA2 5 SER P 260 PHE P 264 1 O TRP P 263 N ILE P 216 SHEET 1 AA3 7 TRP D 89 THR D 90 0 SHEET 2 AA3 7 LYS D 11 ASP D 23 -1 N ARG D 19 O THR D 90 SHEET 3 AA3 7 PHE D 45 HIS D 57 -1 O LEU D 54 N TYR D 13 SHEET 4 AA3 7 GLY D 60 PHE D 64 -1 O ILE D 62 N ILE D 55 SHEET 5 AA3 7 ILE D 111 VAL D 115 1 O VAL D 115 N LEU D 63 SHEET 6 AA3 7 THR D 134 HIS D 138 1 O ILE D 136 N VAL D 114 SHEET 7 AA3 7 GLN D 172 VAL D 176 1 O GLN D 172 N ILE D 135 SHEET 1 AA4 5 ILE D 183 ALA D 186 0 SHEET 2 AA4 5 VAL D 189 GLY D 195 -1 O VAL D 191 N ILE D 183 SHEET 3 AA4 5 MET D 202 LEU D 209 -1 O HIS D 206 N LYS D 190 SHEET 4 AA4 5 GLY D 213 SER D 219 -1 O GLY D 213 N LEU D 209 SHEET 5 AA4 5 SER D 260 PHE D 264 1 O TRP D 263 N ILE D 216 LINK NE2 HIS P 118 CO CO P 301 1555 1555 2.17 LINK ND1 HIS P 120 CO CO P 301 1555 1555 2.20 LINK OD2 ASP P 122 FE FE P 302 1555 1555 2.15 LINK NE2 HIS P 123 FE FE P 302 1555 1555 2.19 LINK NE2 HIS P 198 CO CO P 301 1555 1555 2.27 LINK OD2 ASP P 220 CO CO P 301 1555 1555 2.44 LINK OD2 ASP P 220 FE FE P 302 1555 1555 2.06 LINK NE2 HIS P 266 FE FE P 302 1555 1555 2.31 LINK CO CO P 301 O1 HL6 P 315 1555 1555 2.61 LINK CO CO P 301 O HOH P 410 1555 1555 2.08 LINK FE FE P 302 O2 HL6 P 315 1555 1555 2.20 LINK FE FE P 302 O HOH P 410 1555 1555 2.25 LINK NE2 HIS D 118 CO CO D 301 1555 1555 2.16 LINK ND1 HIS D 120 CO CO D 301 1555 1555 2.20 LINK OD2 ASP D 122 FE FE D 302 1555 1555 2.15 LINK NE2 HIS D 123 FE FE D 302 1555 1555 2.22 LINK NE2 HIS D 198 CO CO D 301 1555 1555 2.27 LINK OD2 ASP D 220 CO CO D 301 1555 1555 2.40 LINK OD2 ASP D 220 FE FE D 302 1555 1555 2.15 LINK NE2 HIS D 266 FE FE D 302 1555 1555 2.29 LINK CO CO D 301 O1 HL6 D 318 1555 1555 2.57 LINK CO CO D 301 O HOH D 401 1555 1555 2.11 LINK FE FE D 302 O2 HL6 D 318 1555 1555 1.99 LINK FE FE D 302 O HOH D 401 1555 1555 2.31 CISPEP 1 GLY P 229 PRO P 230 0 2.30 CISPEP 2 PRO P 230 PRO P 231 0 4.08 CISPEP 3 GLY D 229 PRO D 230 0 5.62 CISPEP 4 PRO D 230 PRO D 231 0 4.00 CRYST1 108.500 108.500 228.500 90.00 90.00 120.00 H 3 18 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009217 0.005321 0.000000 0.00000 SCALE2 0.000000 0.010642 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004376 0.00000