HEADER SUGAR BINDING PROTEIN 21-MAR-24 9B4W TITLE 4F-TRP LABELED OSCILLATORIA AGARDHII AGGLUTININ (OAA) COMPND MOL_ID: 1; COMPND 2 MOLECULE: LECTIN; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: OSCILLATORIA AGARDHII; SOURCE 3 ORGANISM_TAXID: 1160; SOURCE 4 GENE: OAA, NO365_04266; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 7 EXPRESSION_SYSTEM_VARIANT: ROSETTA; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PET-26B(+) KEYWDS BETA BARREL, CARBOHYDRATE BINDING, SUGAR BINDING PROTEIN EXPDTA SOLID-STATE NMR NUMMDL 10 AUTHOR B.R.RUNGE,R.R.ZADOROZHNYI,C.M.QUINN,R.W.RUSSELL,M.LU,S.ANTOLINEZ, AUTHOR 2 J.STRUPPE,C.D.SCHWIETERS,I.L.BYEON,J.HADDEN-PERILLA,A.M.GRONENBORN, AUTHOR 3 T.POLENOVA REVDAT 2 20-NOV-24 9B4W 1 JRNL REVDAT 1 06-NOV-24 9B4W 0 JRNL AUTH B.R.RUNGE,R.ZADOROZHNYI,C.M.QUINN,R.W.RUSSELL,M.LU, JRNL AUTH 2 S.ANTOLINEZ,J.STRUPPE,C.D.SCHWIETERS,I.L.BYEON, JRNL AUTH 3 J.A.HADDEN-PERILLA,A.M.GRONENBORN,T.POLENOVA JRNL TITL INTEGRATING 19 F DISTANCE RESTRAINTS FOR ACCURATE PROTEIN JRNL TITL 2 STRUCTURE DETERMINATION BY MAGIC ANGLE SPINNING NMR JRNL TITL 3 SPECTROSCOPY. JRNL REF J.AM.CHEM.SOC. V. 146 30483 2024 JRNL REFN ESSN 1520-5126 JRNL PMID 39440810 JRNL DOI 10.1021/JACS.4C11373 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : X-PLOR NIH REMARK 3 AUTHORS : SCHWIETERS, KUSZEWSKI, TJANDRA AND CLORE REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 9B4W COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 25-MAR-24. REMARK 100 THE DEPOSITION ID IS D_1000282672. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 6.3 REMARK 210 IONIC STRENGTH : 2.3 REMARK 210 PRESSURE : 1 ATM REMARK 210 SAMPLE CONTENTS : 1.2 MM NAH2PO4, 0.8 MM K2HPO4, REMARK 210 0.2 MM LI2SO4, 0.1 MM CAPS, 30 REMARK 210 MG/ML [U-100% 19F]-4F-TRP, U-100% REMARK 210 13C, U-100% 15N] OAA, H2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D CORD 25 MS; 2D CORD 50 MS; 2D REMARK 210 CORD 100 MS; 2D CORD 250 MS; 2D REMARK 210 CORD 500 MS; 2D NCACX 50 MS; 2D REMARK 210 NCOCX 25 MS; 3D NCACX 50 MS; 3D REMARK 210 NCOCX 25 MS; 2D HCH HETCOR; 2D REMARK 210 HNH HETCOR; 2D 19F-19F RFDR; 2D REMARK 210 HCF HETCOR; 3D HCHF HETCOR REMARK 210 SPECTROMETER FIELD STRENGTH : 850 MHZ; 600 MHZ; 500 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE III; AVANCE III HD REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : TOPSPIN, NMRPIPE, CCPNMR REMARK 210 ANALYSIS, NMRFAM-SPARKY, X-PLOR REMARK 210 NIH REMARK 210 METHOD USED : SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 1000 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 10 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 217 REMARK 217 SOLID STATE NMR STUDY REMARK 217 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLID REMARK 217 STATE NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 217 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 217 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 465 SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 MODELS 1-10 REMARK 465 RES C SSSEQI REMARK 465 MET A 1 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 ARG A 28 144.51 -170.19 REMARK 500 1 VAL A 34 -70.26 64.91 REMARK 500 1 THR A 46 99.75 176.25 REMARK 500 1 LEU A 92 -162.15 -103.77 REMARK 500 1 ASN A 97 18.58 59.17 REMARK 500 1 VAL A 101 -68.58 72.15 REMARK 500 1 GLN A 112 -168.35 -61.52 REMARK 500 2 VAL A 34 -52.15 69.70 REMARK 500 2 THR A 46 98.27 175.94 REMARK 500 2 LEU A 92 -165.94 -102.89 REMARK 500 2 ASN A 97 17.80 57.83 REMARK 500 2 VAL A 101 -64.32 67.57 REMARK 500 2 GLN A 112 -168.49 -62.53 REMARK 500 3 VAL A 34 -75.59 60.89 REMARK 500 3 GLN A 45 67.38 -101.84 REMARK 500 3 THR A 46 100.48 176.60 REMARK 500 3 VAL A 101 -86.16 58.68 REMARK 500 3 GLN A 112 -168.26 -61.72 REMARK 500 4 VAL A 34 -73.30 62.94 REMARK 500 4 THR A 46 97.99 175.68 REMARK 500 4 LEU A 92 -165.39 -100.40 REMARK 500 4 VAL A 101 -67.48 78.50 REMARK 500 4 GLN A 112 -167.85 -61.83 REMARK 500 5 VAL A 34 -66.13 65.39 REMARK 500 5 THR A 46 97.77 175.45 REMARK 500 5 LEU A 66 -60.30 -95.12 REMARK 500 5 ASN A 68 -172.64 -66.00 REMARK 500 5 LEU A 92 -165.41 -101.14 REMARK 500 5 VAL A 101 -73.27 72.99 REMARK 500 5 GLN A 112 -168.66 -61.61 REMARK 500 6 GLU A 19 161.43 -48.66 REMARK 500 6 VAL A 34 -84.43 52.81 REMARK 500 6 THR A 46 98.32 177.97 REMARK 500 6 ASN A 48 40.86 -106.31 REMARK 500 6 LEU A 92 -167.43 -103.38 REMARK 500 6 ASN A 97 17.44 57.67 REMARK 500 6 VAL A 101 -69.69 65.14 REMARK 500 6 GLN A 112 -169.42 -62.39 REMARK 500 7 VAL A 34 -52.39 69.79 REMARK 500 7 THR A 46 97.97 175.17 REMARK 500 7 LEU A 92 -164.50 -107.27 REMARK 500 7 ASN A 97 19.60 58.72 REMARK 500 7 VAL A 101 -83.73 60.90 REMARK 500 7 GLN A 112 -168.44 -62.76 REMARK 500 8 ARG A 28 113.94 -166.52 REMARK 500 8 VAL A 34 -69.96 64.21 REMARK 500 8 THR A 46 99.06 175.47 REMARK 500 8 LEU A 92 -158.03 -131.21 REMARK 500 8 VAL A 101 -80.56 60.28 REMARK 500 8 ASP A 110 49.54 71.30 REMARK 500 REMARK 500 THIS ENTRY HAS 64 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 31153 RELATED DB: BMRB REMARK 900 4F-TRP LABELED OSCILLATORIA AGARDHII AGGLUTININ (OAA) DBREF 9B4W A 1 133 UNP C0STD7 C0STD7_PLAAG 1 133 SEQRES 1 A 133 MET ALA LEU TYR ASN VAL GLU ASN GLN 4FW GLY GLY SER SEQRES 2 A 133 SER ALA PRO 4FW ASN GLU GLY GLY GLN 4FW GLU ILE GLY SEQRES 3 A 133 SER ARG SER ASP GLN ASN VAL VAL ALA ILE ASN VAL GLU SEQRES 4 A 133 SER GLY ASP ASP GLY GLN THR LEU ASN GLY THR MET THR SEQRES 5 A 133 TYR ALA GLY GLU GLY PRO ILE GLY PHE ARG ALA THR LEU SEQRES 6 A 133 LEU GLY ASN ASN SER TYR GLU VAL GLU ASN GLN 4FW GLY SEQRES 7 A 133 GLY ASP SER ALA PRO 4FW HIS SER GLY GLY ASN 4FW ILE SEQRES 8 A 133 LEU GLY SER ARG GLU ASN GLN ASN VAL VAL ALA ILE ASN SEQRES 9 A 133 VAL GLU SER GLY ASP ASP GLY GLN THR LEU ASN GLY THR SEQRES 10 A 133 MET THR TYR ALA GLY GLU GLY PRO ILE GLY PHE LYS GLY SEQRES 11 A 133 THR LEU THR MODRES 9B4W 4FW A 10 TRP MODIFIED RESIDUE MODRES 9B4W 4FW A 17 TRP MODIFIED RESIDUE MODRES 9B4W 4FW A 23 TRP MODIFIED RESIDUE MODRES 9B4W 4FW A 77 TRP MODIFIED RESIDUE MODRES 9B4W 4FW A 84 TRP MODIFIED RESIDUE MODRES 9B4W 4FW A 90 TRP MODIFIED RESIDUE HET 4FW A 10 24 HET 4FW A 17 24 HET 4FW A 23 24 HET 4FW A 77 24 HET 4FW A 84 24 HET 4FW A 90 24 HETNAM 4FW 4-FLUOROTRYPTOPHANE FORMUL 1 4FW 6(C11 H11 F N2 O2) SHEET 1 AA112 4FW A 84 HIS A 85 0 SHEET 2 AA112 SER A 70 GLN A 76 -1 N ASN A 75 O HIS A 85 SHEET 3 AA112 4FW A 90 ILE A 91 -1 O 4FW A 90 N TYR A 71 SHEET 4 AA112 ASN A 18 GLU A 24 -1 N GLU A 24 O ILE A 91 SHEET 5 AA112 LEU A 3 GLN A 9 -1 N VAL A 6 O GLY A 21 SHEET 6 AA112 PRO A 125 LEU A 132 -1 O THR A 131 N ASN A 5 SHEET 7 AA112 THR A 117 THR A 119 -1 N MET A 118 O ILE A 126 SHEET 8 AA112 ALA A 102 GLU A 106 -1 N ALA A 102 O THR A 119 SHEET 9 AA112 ALA A 35 VAL A 38 -1 N ILE A 36 O VAL A 105 SHEET 10 AA112 THR A 50 THR A 52 -1 O THR A 50 N ASN A 37 SHEET 11 AA112 PRO A 58 LEU A 65 -1 O ILE A 59 N MET A 51 SHEET 12 AA112 SER A 70 GLN A 76 -1 O GLN A 76 N GLY A 60 LINK C GLN A 9 N 4FW A 10 1555 1555 1.33 LINK C 4FW A 10 N GLY A 11 1555 1555 1.33 LINK C PRO A 16 N 4FW A 17 1555 1555 1.33 LINK C 4FW A 17 N ASN A 18 1555 1555 1.33 LINK C GLN A 22 N 4FW A 23 1555 1555 1.32 LINK C 4FW A 23 N GLU A 24 1555 1555 1.32 LINK C GLN A 76 N 4FW A 77 1555 1555 1.33 LINK C 4FW A 77 N GLY A 78 1555 1555 1.33 LINK C PRO A 83 N 4FW A 84 1555 1555 1.33 LINK C 4FW A 84 N HIS A 85 1555 1555 1.33 LINK C ASN A 89 N 4FW A 90 1555 1555 1.34 LINK C 4FW A 90 N ILE A 91 1555 1555 1.32 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1 ENDMDL MODEL 2 ENDMDL MODEL 3 ENDMDL MODEL 4 ENDMDL MODEL 5 ENDMDL MODEL 6 ENDMDL MODEL 7 ENDMDL MODEL 8 ENDMDL MODEL 9 ENDMDL MODEL 10 ENDMDL CONECT 112 127 CONECT 127 112 128 142 CONECT 128 127 129 140 143 CONECT 129 128 130 144 145 CONECT 130 129 131 134 CONECT 131 130 132 133 CONECT 132 131 135 136 CONECT 133 131 137 138 CONECT 134 130 135 146 CONECT 135 132 134 147 CONECT 136 132 139 148 CONECT 137 133 139 149 CONECT 138 133 CONECT 139 136 137 150 CONECT 140 128 141 151 CONECT 141 140 CONECT 142 127 CONECT 143 128 CONECT 144 129 CONECT 145 129 CONECT 146 134 CONECT 147 135 CONECT 148 136 CONECT 149 137 CONECT 150 139 CONECT 151 140 CONECT 199 211 CONECT 211 199 212 226 CONECT 212 211 213 224 227 CONECT 213 212 214 228 229 CONECT 214 213 215 218 CONECT 215 214 216 217 CONECT 216 215 219 220 CONECT 217 215 221 222 CONECT 218 214 219 230 CONECT 219 216 218 231 CONECT 220 216 223 232 CONECT 221 217 223 233 CONECT 222 217 CONECT 223 220 221 234 CONECT 224 212 225 235 CONECT 225 224 CONECT 226 211 CONECT 227 212 CONECT 228 213 CONECT 229 213 CONECT 230 218 CONECT 231 219 CONECT 232 220 CONECT 233 221 CONECT 234 223 CONECT 235 224 CONECT 280 295 CONECT 295 280 296 310 CONECT 296 295 297 308 311 CONECT 297 296 298 312 313 CONECT 298 297 299 302 CONECT 299 298 300 301 CONECT 300 299 303 304 CONECT 301 299 305 306 CONECT 302 298 303 314 CONECT 303 300 302 315 CONECT 304 300 307 316 CONECT 305 301 307 317 CONECT 306 301 CONECT 307 304 305 318 CONECT 308 296 309 319 CONECT 309 308 CONECT 310 295 CONECT 311 296 CONECT 312 297 CONECT 313 297 CONECT 314 302 CONECT 315 303 CONECT 316 304 CONECT 317 305 CONECT 318 307 CONECT 319 308 CONECT 1055 1070 CONECT 1070 1055 1071 1085 CONECT 1071 1070 1072 1083 1086 CONECT 1072 1071 1073 1087 1088 CONECT 1073 1072 1074 1077 CONECT 1074 1073 1075 1076 CONECT 1075 1074 1078 1079 CONECT 1076 1074 1080 1081 CONECT 1077 1073 1078 1089 CONECT 1078 1075 1077 1090 CONECT 1079 1075 1082 1091 CONECT 1080 1076 1082 1092 CONECT 1081 1076 CONECT 1082 1079 1080 1093 CONECT 1083 1071 1084 1094 CONECT 1084 1083 CONECT 1085 1070 CONECT 1086 1071 CONECT 1087 1072 CONECT 1088 1072 CONECT 1089 1077 CONECT 1090 1078 CONECT 1091 1079 CONECT 1092 1080 CONECT 1093 1082 CONECT 1094 1083 CONECT 1143 1155 CONECT 1155 1143 1156 1170 CONECT 1156 1155 1157 1168 1171 CONECT 1157 1156 1158 1172 1173 CONECT 1158 1157 1159 1162 CONECT 1159 1158 1160 1161 CONECT 1160 1159 1163 1164 CONECT 1161 1159 1165 1166 CONECT 1162 1158 1163 1174 CONECT 1163 1160 1162 1175 CONECT 1164 1160 1167 1176 CONECT 1165 1161 1167 1177 CONECT 1166 1161 CONECT 1167 1164 1165 1178 CONECT 1168 1156 1169 1179 CONECT 1169 1168 CONECT 1170 1155 CONECT 1171 1156 CONECT 1172 1157 CONECT 1173 1157 CONECT 1174 1162 CONECT 1175 1163 CONECT 1176 1164 CONECT 1177 1165 CONECT 1178 1167 CONECT 1179 1168 CONECT 1223 1235 CONECT 1235 1223 1236 1250 CONECT 1236 1235 1237 1248 1251 CONECT 1237 1236 1238 1252 1253 CONECT 1238 1237 1239 1242 CONECT 1239 1238 1240 1241 CONECT 1240 1239 1243 1244 CONECT 1241 1239 1245 1246 CONECT 1242 1238 1243 1254 CONECT 1243 1240 1242 1255 CONECT 1244 1240 1247 1256 CONECT 1245 1241 1247 1257 CONECT 1246 1241 CONECT 1247 1244 1245 1258 CONECT 1248 1236 1249 1259 CONECT 1249 1248 CONECT 1250 1235 CONECT 1251 1236 CONECT 1252 1237 CONECT 1253 1237 CONECT 1254 1242 CONECT 1255 1243 CONECT 1256 1244 CONECT 1257 1245 CONECT 1258 1247 CONECT 1259 1248 MASTER 158 0 6 0 12 0 0 6 989 1 156 11 END