HEADER PROTEIN BINDING 03-APR-24 9BA2 TITLE CRYSTAL STRUCTURE OF THE BINARY COMPLEX OF DCAF1 AND WDR5 COMPND MOL_ID: 1; COMPND 2 MOLECULE: DDB1- AND CUL4-ASSOCIATED FACTOR 1; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: RESIDUES 1080-1390; COMPND 5 SYNONYM: HIV-1 VPR-BINDING PROTEIN,VPRBP,SERINE/THREONINE-PROTEIN COMPND 6 KINASE VPRBP,VPR-INTERACTING PROTEIN; COMPND 7 EC: 2.7.11.1; COMPND 8 ENGINEERED: YES; COMPND 9 MOL_ID: 2; COMPND 10 MOLECULE: WD REPEAT-CONTAINING PROTEIN 5; COMPND 11 CHAIN: B; COMPND 12 SYNONYM: BMP2-INDUCED 3-KB GENE PROTEIN; COMPND 13 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: DCAF1, KIAA0800, RIP, VPRBP; SOURCE 6 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 7108; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 10 ORGANISM_COMMON: HUMAN; SOURCE 11 ORGANISM_TAXID: 9606; SOURCE 12 GENE: WDR5, BIG3; SOURCE 13 EXPRESSION_SYSTEM: ESCHERICHIA COLI 'BL21-GOLD(DE3)PLYSS AG'; SOURCE 14 EXPRESSION_SYSTEM_TAXID: 866768 KEYWDS E3 LIGASE, ADAPTOR, PROTAC, WDR, TERNARY COMPLEX, PROTEIN BINDING EXPDTA X-RAY DIFFRACTION AUTHOR M.F.MABANGLO,B.J.WILSON,S.SRIVASTAVA,R.AL-AWAR,M.VEDADI REVDAT 2 04-DEC-24 9BA2 1 JRNL REVDAT 1 06-NOV-24 9BA2 0 JRNL AUTH M.F.MABANGLO,B.WILSON,M.NOURELDIN,S.W.KIMANI,A.MAMAI, JRNL AUTH 2 C.KRAUSSER,H.GONZALEZ-ALVAREZ,S.SRIVASTAVA,M.MOHAMMED, JRNL AUTH 3 L.HOFFER,M.CHAN,J.AVRUMUTSOAE,A.S.M.LI,T.HAJIAN,S.TUCKER, JRNL AUTH 4 S.GREEN,M.SZEWCZYK,D.BARSYTE-LOVEJOY,V.SANTHAKUMAR,S.ACKLOO, JRNL AUTH 5 P.LOPPNAU,Y.LI,A.SEITOVA,T.KIYOTA,J.G.WANG,G.G.PRIVE, JRNL AUTH 6 D.A.KUNTZ,B.PATEL,V.RATHOD,A.VALA,B.ROUT,A.AMAN,G.PODA, JRNL AUTH 7 D.UEHLING,J.RAMNAUTH,L.HALABELIAN,R.MARCELLUS,R.AL-AWAR, JRNL AUTH 8 M.VEDADI JRNL TITL CRYSTAL STRUCTURES OF DCAF1-PROTAC-WDR5 TERNARY COMPLEXES JRNL TITL 2 PROVIDE INSIGHT INTO DCAF1 SUBSTRATE SPECIFICITY. JRNL REF NAT COMMUN V. 15 10165 2024 JRNL REFN ESSN 2041-1723 JRNL PMID 39580491 JRNL DOI 10.1038/S41467-024-54500-X REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH D.LIEBSCHNER,P.V.AFONINE,M.L.BAKER,G.BUNKOCZI,V.B.CHEN, REMARK 1 AUTH 2 T.I.CROLL,B.HINTZE,L.W.HUNG,S.JAIN,A.J.MCCOY,N.W.MORIARTY, REMARK 1 AUTH 3 R.D.OEFFNER,B.K.POON,M.G.PRISANT,R.J.READ,J.S.RICHARDSON, REMARK 1 AUTH 4 D.C.RICHARDSON,M.D.SAMMITO,O.V.SOBOLEV,D.H.STOCKWELL, REMARK 1 AUTH 5 T.C.TERWILLIGER,A.G.URZHUMTSEV,L.L.VIDEAU,C.J.WILLIAMS, REMARK 1 AUTH 6 P.D.ADAMS REMARK 1 TITL MACROMOLECULAR STRUCTURE DETERMINATION USING X-RAYS, REMARK 1 TITL 2 NEUTRONS AND ELECTRONS: RECENT DEVELOPMENTS IN PHENIX REMARK 1 REF ACTA CRYSTALLOGR., SECT. D: V. 75 861 2019 REMARK 1 REF 2 BIOL. CRYSTALLOGR. REMARK 1 REFN ISSN 0907-4449 REMARK 1 PMID 31588918 REMARK 1 DOI 10.1107/S2059798319011471 REMARK 2 REMARK 2 RESOLUTION. 2.97 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.21_5207 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.97 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 45.58 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 13567 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.231 REMARK 3 R VALUE (WORKING SET) : 0.230 REMARK 3 FREE R VALUE : 0.266 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.890 REMARK 3 FREE R VALUE TEST SET COUNT : 664 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 45.5800 - 5.0800 1.00 2734 128 0.2270 0.2585 REMARK 3 2 5.0800 - 4.0300 1.00 2589 125 0.2016 0.2401 REMARK 3 3 4.0300 - 3.5200 1.00 2557 137 0.2325 0.2597 REMARK 3 4 3.5200 - 3.2000 1.00 2501 149 0.2775 0.3190 REMARK 3 5 3.2000 - 2.9700 1.00 2522 125 0.2799 0.3191 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.369 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 25.294 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 84.45 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 92.44 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.009 4914 REMARK 3 ANGLE : 1.050 6660 REMARK 3 CHIRALITY : 0.058 744 REMARK 3 PLANARITY : 0.008 846 REMARK 3 DIHEDRAL : 17.358 1750 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 9BA2 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 15-APR-24. REMARK 100 THE DEPOSITION ID IS D_1000282947. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-DEC-23 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : CLSI REMARK 200 BEAMLINE : 08B1-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.18061 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : POINTLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 13571 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.970 REMARK 200 RESOLUTION RANGE LOW (A) : 45.580 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 2.000 REMARK 200 R MERGE (I) : 0.02081 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 23.0100 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.97 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.20 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.21580 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 41.20 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.09 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M IMIDAZOLE, PH 7.4, 20% W/V REMARK 280 POLYETHYLENE GLYCOL 4,000, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 294K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 23.79850 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 79.07600 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 41.59250 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 79.07600 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 23.79850 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 41.59250 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1053 REMARK 465 GLY A 1054 REMARK 465 SER A 1055 REMARK 465 SER A 1056 REMARK 465 HIS A 1057 REMARK 465 HIS A 1058 REMARK 465 HIS A 1059 REMARK 465 HIS A 1060 REMARK 465 HIS A 1061 REMARK 465 HIS A 1062 REMARK 465 SER A 1063 REMARK 465 SER A 1064 REMARK 465 GLY A 1065 REMARK 465 ARG A 1066 REMARK 465 GLU A 1067 REMARK 465 ASN A 1068 REMARK 465 LEU A 1069 REMARK 465 TYR A 1070 REMARK 465 PHE A 1071 REMARK 465 GLN A 1072 REMARK 465 GLY A 1073 REMARK 465 SER A 1074 REMARK 465 SER A 1075 REMARK 465 ARG A 1076 REMARK 465 ASP A 1316 REMARK 465 ASP A 1317 REMARK 465 GLU A 1318 REMARK 465 ASP A 1319 REMARK 465 ASP A 1376 REMARK 465 ALA A 1377 REMARK 465 LEU A 1378 REMARK 465 MET B 6 REMARK 465 HIS B 7 REMARK 465 HIS B 8 REMARK 465 HIS B 9 REMARK 465 HIS B 10 REMARK 465 HIS B 11 REMARK 465 HIS B 12 REMARK 465 SER B 13 REMARK 465 SER B 14 REMARK 465 GLY B 15 REMARK 465 ARG B 16 REMARK 465 GLU B 17 REMARK 465 ASN B 18 REMARK 465 LEU B 19 REMARK 465 TYR B 20 REMARK 465 PHE B 21 REMARK 465 GLN B 22 REMARK 465 GLY B 23 REMARK 465 THR B 24 REMARK 465 GLN B 25 REMARK 465 SER B 26 REMARK 465 LYS B 27 REMARK 465 PRO B 28 REMARK 465 THR B 29 REMARK 465 PRO B 30 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OG SER A 1136 O TRP A 1156 1.83 REMARK 500 O LYS B 245 O HOH B 401 1.92 REMARK 500 O GLY B 226 OH TYR B 243 1.95 REMARK 500 O TYR B 131 OG SER B 148 1.97 REMARK 500 OG SER B 97 O PRO B 139 1.98 REMARK 500 N SER B 97 OG SER B 141 2.04 REMARK 500 O HOH A 1505 O HOH A 1536 2.06 REMARK 500 O HIS B 86 O HOH B 402 2.11 REMARK 500 OD2 ASP B 157 OG1 THR B 160 2.11 REMARK 500 ND2 ASN B 180 OD1 ASP B 182 2.12 REMARK 500 OG1 THR B 269 OD1 ASN B 314 2.18 REMARK 500 O ASN A 1222 O HOH A 1501 2.18 REMARK 500 OG SER A 1332 OD1 ASP A 1349 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A1106 32.60 -93.99 REMARK 500 CYS A1113 1.05 -64.46 REMARK 500 ALA A1154 -166.54 -123.65 REMARK 500 THR A1155 -60.13 -101.74 REMARK 500 SER A1157 160.46 126.26 REMARK 500 SER A1168 -8.51 64.25 REMARK 500 PHE A1215 149.47 -170.41 REMARK 500 ASN A1239 114.97 -160.40 REMARK 500 HIS A1253 136.21 -173.17 REMARK 500 ASN A1276 -122.86 54.49 REMARK 500 GLN A1314 -54.66 -120.96 REMARK 500 MET A1322 176.78 73.09 REMARK 500 GLU A1323 -163.39 -79.27 REMARK 500 ARG A1325 32.84 -140.06 REMARK 500 ILE A1345 -63.89 -125.03 REMARK 500 SER A1374 -166.03 -162.35 REMARK 500 MET A1380 141.54 -173.42 REMARK 500 LYS B 67 -0.86 78.99 REMARK 500 PHE B 79 94.08 -69.82 REMARK 500 LYS B 81 171.10 -54.48 REMARK 500 LEU B 88 -166.98 -104.10 REMARK 500 PRO B 168 61.66 -65.69 REMARK 500 ASP B 235 41.43 -102.49 REMARK 500 THR B 269 -62.53 -90.84 REMARK 500 LYS B 291 8.75 59.40 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A1565 DISTANCE = 6.55 ANGSTROMS REMARK 525 HOH A1566 DISTANCE = 6.91 ANGSTROMS REMARK 525 HOH A1567 DISTANCE = 8.89 ANGSTROMS REMARK 525 HOH A1568 DISTANCE = 8.99 ANGSTROMS REMARK 525 HOH B 416 DISTANCE = 5.82 ANGSTROMS DBREF 9BA2 A 1080 1390 UNP Q9Y4B6 DCAF1_HUMAN 1080 1390 DBREF 9BA2 B 24 334 UNP P61964 WDR5_HUMAN 24 334 SEQADV 9BA2 MET A 1053 UNP Q9Y4B6 INITIATING METHIONINE SEQADV 9BA2 GLY A 1054 UNP Q9Y4B6 EXPRESSION TAG SEQADV 9BA2 SER A 1055 UNP Q9Y4B6 EXPRESSION TAG SEQADV 9BA2 SER A 1056 UNP Q9Y4B6 EXPRESSION TAG SEQADV 9BA2 HIS A 1057 UNP Q9Y4B6 EXPRESSION TAG SEQADV 9BA2 HIS A 1058 UNP Q9Y4B6 EXPRESSION TAG SEQADV 9BA2 HIS A 1059 UNP Q9Y4B6 EXPRESSION TAG SEQADV 9BA2 HIS A 1060 UNP Q9Y4B6 EXPRESSION TAG SEQADV 9BA2 HIS A 1061 UNP Q9Y4B6 EXPRESSION TAG SEQADV 9BA2 HIS A 1062 UNP Q9Y4B6 EXPRESSION TAG SEQADV 9BA2 SER A 1063 UNP Q9Y4B6 EXPRESSION TAG SEQADV 9BA2 SER A 1064 UNP Q9Y4B6 EXPRESSION TAG SEQADV 9BA2 GLY A 1065 UNP Q9Y4B6 EXPRESSION TAG SEQADV 9BA2 ARG A 1066 UNP Q9Y4B6 EXPRESSION TAG SEQADV 9BA2 GLU A 1067 UNP Q9Y4B6 EXPRESSION TAG SEQADV 9BA2 ASN A 1068 UNP Q9Y4B6 EXPRESSION TAG SEQADV 9BA2 LEU A 1069 UNP Q9Y4B6 EXPRESSION TAG SEQADV 9BA2 TYR A 1070 UNP Q9Y4B6 EXPRESSION TAG SEQADV 9BA2 PHE A 1071 UNP Q9Y4B6 EXPRESSION TAG SEQADV 9BA2 GLN A 1072 UNP Q9Y4B6 EXPRESSION TAG SEQADV 9BA2 GLY A 1073 UNP Q9Y4B6 EXPRESSION TAG SEQADV 9BA2 SER A 1074 UNP Q9Y4B6 EXPRESSION TAG SEQADV 9BA2 SER A 1075 UNP Q9Y4B6 EXPRESSION TAG SEQADV 9BA2 ARG A 1076 UNP Q9Y4B6 EXPRESSION TAG SEQADV 9BA2 ALA A 1077 UNP Q9Y4B6 EXPRESSION TAG SEQADV 9BA2 SER A 1078 UNP Q9Y4B6 EXPRESSION TAG SEQADV 9BA2 ALA A 1079 UNP Q9Y4B6 EXPRESSION TAG SEQADV 9BA2 MET B 6 UNP P61964 INITIATING METHIONINE SEQADV 9BA2 HIS B 7 UNP P61964 EXPRESSION TAG SEQADV 9BA2 HIS B 8 UNP P61964 EXPRESSION TAG SEQADV 9BA2 HIS B 9 UNP P61964 EXPRESSION TAG SEQADV 9BA2 HIS B 10 UNP P61964 EXPRESSION TAG SEQADV 9BA2 HIS B 11 UNP P61964 EXPRESSION TAG SEQADV 9BA2 HIS B 12 UNP P61964 EXPRESSION TAG SEQADV 9BA2 SER B 13 UNP P61964 EXPRESSION TAG SEQADV 9BA2 SER B 14 UNP P61964 EXPRESSION TAG SEQADV 9BA2 GLY B 15 UNP P61964 EXPRESSION TAG SEQADV 9BA2 ARG B 16 UNP P61964 EXPRESSION TAG SEQADV 9BA2 GLU B 17 UNP P61964 EXPRESSION TAG SEQADV 9BA2 ASN B 18 UNP P61964 EXPRESSION TAG SEQADV 9BA2 LEU B 19 UNP P61964 EXPRESSION TAG SEQADV 9BA2 TYR B 20 UNP P61964 EXPRESSION TAG SEQADV 9BA2 PHE B 21 UNP P61964 EXPRESSION TAG SEQADV 9BA2 GLN B 22 UNP P61964 EXPRESSION TAG SEQADV 9BA2 GLY B 23 UNP P61964 EXPRESSION TAG SEQRES 1 A 338 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 338 ARG GLU ASN LEU TYR PHE GLN GLY SER SER ARG ALA SER SEQRES 3 A 338 ALA PHE ARG PRO ILE SER VAL PHE ARG GLU ALA ASN GLU SEQRES 4 A 338 ASP GLU SER GLY PHE THR CYS CYS ALA PHE SER ALA ARG SEQRES 5 A 338 GLU ARG PHE LEU MET LEU GLY THR CYS THR GLY GLN LEU SEQRES 6 A 338 LYS LEU TYR ASN VAL PHE SER GLY GLN GLU GLU ALA SER SEQRES 7 A 338 TYR ASN CYS HIS ASN SER ALA ILE THR HIS LEU GLU PRO SEQRES 8 A 338 SER ARG ASP GLY SER LEU LEU LEU THR SER ALA THR TRP SEQRES 9 A 338 SER GLN PRO LEU SER ALA LEU TRP GLY MET LYS SER VAL SEQRES 10 A 338 PHE ASP MET LYS HIS SER PHE THR GLU ASP HIS TYR VAL SEQRES 11 A 338 GLU PHE SER LYS HIS SER GLN ASP ARG VAL ILE GLY THR SEQRES 12 A 338 LYS GLY ASP ILE ALA HIS ILE TYR ASP ILE GLN THR GLY SEQRES 13 A 338 ASN LYS LEU LEU THR LEU PHE ASN PRO ASP LEU ALA ASN SEQRES 14 A 338 ASN TYR LYS ARG ASN CYS ALA THR PHE ASN PRO THR ASP SEQRES 15 A 338 ASP LEU VAL LEU ASN ASP GLY VAL LEU TRP ASP VAL ARG SEQRES 16 A 338 SER ALA GLN ALA ILE HIS LYS PHE ASP LYS PHE ASN MET SEQRES 17 A 338 ASN ILE SER GLY VAL PHE HIS PRO ASN GLY LEU GLU VAL SEQRES 18 A 338 ILE ILE ASN THR GLU ILE TRP ASP LEU ARG THR PHE HIS SEQRES 19 A 338 LEU LEU HIS THR VAL PRO ALA LEU ASP GLN CYS ARG VAL SEQRES 20 A 338 VAL PHE ASN HIS THR GLY THR VAL MET TYR GLY ALA MET SEQRES 21 A 338 LEU GLN ALA ASP ASP GLU ASP ASP LEU MET GLU GLU ARG SEQRES 22 A 338 MET LYS SER PRO PHE GLY SER SER PHE ARG THR PHE ASN SEQRES 23 A 338 ALA THR ASP TYR LYS PRO ILE ALA THR ILE ASP VAL LYS SEQRES 24 A 338 ARG ASN ILE PHE ASP LEU CYS THR ASP THR LYS ASP CYS SEQRES 25 A 338 TYR LEU ALA VAL ILE GLU ASN GLN GLY SER MET ASP ALA SEQRES 26 A 338 LEU ASN MET ASP THR VAL CYS ARG LEU TYR GLU VAL GLY SEQRES 1 B 329 MET HIS HIS HIS HIS HIS HIS SER SER GLY ARG GLU ASN SEQRES 2 B 329 LEU TYR PHE GLN GLY THR GLN SER LYS PRO THR PRO VAL SEQRES 3 B 329 LYS PRO ASN TYR ALA LEU LYS PHE THR LEU ALA GLY HIS SEQRES 4 B 329 THR LYS ALA VAL SER SER VAL LYS PHE SER PRO ASN GLY SEQRES 5 B 329 GLU TRP LEU ALA SER SER SER ALA ASP LYS LEU ILE LYS SEQRES 6 B 329 ILE TRP GLY ALA TYR ASP GLY LYS PHE GLU LYS THR ILE SEQRES 7 B 329 SER GLY HIS LYS LEU GLY ILE SER ASP VAL ALA TRP SER SEQRES 8 B 329 SER ASP SER ASN LEU LEU VAL SER ALA SER ASP ASP LYS SEQRES 9 B 329 THR LEU LYS ILE TRP ASP VAL SER SER GLY LYS CYS LEU SEQRES 10 B 329 LYS THR LEU LYS GLY HIS SER ASN TYR VAL PHE CYS CYS SEQRES 11 B 329 ASN PHE ASN PRO GLN SER ASN LEU ILE VAL SER GLY SER SEQRES 12 B 329 PHE ASP GLU SER VAL ARG ILE TRP ASP VAL LYS THR GLY SEQRES 13 B 329 LYS CYS LEU LYS THR LEU PRO ALA HIS SER ASP PRO VAL SEQRES 14 B 329 SER ALA VAL HIS PHE ASN ARG ASP GLY SER LEU ILE VAL SEQRES 15 B 329 SER SER SER TYR ASP GLY LEU CYS ARG ILE TRP ASP THR SEQRES 16 B 329 ALA SER GLY GLN CYS LEU LYS THR LEU ILE ASP ASP ASP SEQRES 17 B 329 ASN PRO PRO VAL SER PHE VAL LYS PHE SER PRO ASN GLY SEQRES 18 B 329 LYS TYR ILE LEU ALA ALA THR LEU ASP ASN THR LEU LYS SEQRES 19 B 329 LEU TRP ASP TYR SER LYS GLY LYS CYS LEU LYS THR TYR SEQRES 20 B 329 THR GLY HIS LYS ASN GLU LYS TYR CYS ILE PHE ALA ASN SEQRES 21 B 329 PHE SER VAL THR GLY GLY LYS TRP ILE VAL SER GLY SER SEQRES 22 B 329 GLU ASP ASN LEU VAL TYR ILE TRP ASN LEU GLN THR LYS SEQRES 23 B 329 GLU ILE VAL GLN LYS LEU GLN GLY HIS THR ASP VAL VAL SEQRES 24 B 329 ILE SER THR ALA CYS HIS PRO THR GLU ASN ILE ILE ALA SEQRES 25 B 329 SER ALA ALA LEU GLU ASN ASP LYS THR ILE LYS LEU TRP SEQRES 26 B 329 LYS SER ASP CYS HET IMD A1401 9 HETNAM IMD IMIDAZOLE FORMUL 3 IMD C3 H5 N2 1+ FORMUL 4 HOH *84(H2 O) HELIX 1 AA1 PRO A 1292 ASP A 1295 5 4 SHEET 1 AA1 4 ALA A1079 ARG A1087 0 SHEET 2 AA1 4 THR A1382 GLY A1390 -1 O GLY A1390 N ALA A1079 SHEET 3 AA1 4 TYR A1365 ASN A1371 -1 N LEU A1366 O TYR A1387 SHEET 4 AA1 4 ILE A1354 THR A1359 -1 N CYS A1358 O ALA A1367 SHEET 1 AA2 4 PHE A1096 PHE A1101 0 SHEET 2 AA2 4 PHE A1107 THR A1112 -1 O MET A1109 N ALA A1100 SHEET 3 AA2 4 GLN A1116 ASN A1121 -1 O LYS A1118 N LEU A1110 SHEET 4 AA2 4 GLU A1127 ASN A1132 -1 O GLU A1128 N LEU A1119 SHEET 1 AA3 4 HIS A1140 PRO A1143 0 SHEET 2 AA3 4 LEU A1149 SER A1153 -1 O SER A1153 N HIS A1140 SHEET 3 AA3 4 SER A1161 GLY A1165 -1 O TRP A1164 N LEU A1150 SHEET 4 AA3 4 ASP A1171 PHE A1176 -1 O ASP A1171 N GLY A1165 SHEET 1 AA4 4 TYR A1181 PHE A1184 0 SHEET 2 AA4 4 VAL A1192 LYS A1196 -1 O ILE A1193 N GLU A1183 SHEET 3 AA4 4 ILE A1199 TYR A1203 -1 O ILE A1199 N LYS A1196 SHEET 4 AA4 4 LYS A1210 LEU A1214 -1 O LEU A1214 N ALA A1200 SHEET 1 AA5 4 THR A1229 PHE A1230 0 SHEET 2 AA5 4 LEU A1236 ASN A1239 -1 O LEU A1238 N THR A1229 SHEET 3 AA5 4 VAL A1242 ASP A1245 -1 O TRP A1244 N VAL A1237 SHEET 4 AA5 4 GLN A1250 LYS A1254 -1 O ILE A1252 N LEU A1243 SHEET 1 AA6 4 VAL A1265 PHE A1266 0 SHEET 2 AA6 4 GLU A1272 ILE A1275 -1 O ILE A1274 N VAL A1265 SHEET 3 AA6 4 GLU A1278 ASP A1281 -1 O TRP A1280 N VAL A1273 SHEET 4 AA6 4 LEU A1287 THR A1290 -1 O LEU A1288 N ILE A1279 SHEET 1 AA7 4 CYS A1297 PHE A1301 0 SHEET 2 AA7 4 VAL A1307 MET A1312 -1 O TYR A1309 N VAL A1300 SHEET 3 AA7 4 SER A1333 ASN A1338 -1 O PHE A1337 N MET A1308 SHEET 4 AA7 4 PRO A1344 ASP A1349 -1 O ILE A1348 N PHE A1334 SHEET 1 AA8 4 ALA B 36 LEU B 41 0 SHEET 2 AA8 4 ILE B 327 LYS B 331 -1 O ILE B 327 N LEU B 41 SHEET 3 AA8 4 ILE B 315 ALA B 320 -1 N ILE B 316 O TRP B 330 SHEET 4 AA8 4 VAL B 304 SER B 306 -1 N SER B 306 O ALA B 319 SHEET 1 AA9 4 VAL B 48 PHE B 53 0 SHEET 2 AA9 4 TRP B 59 SER B 64 -1 O SER B 63 N SER B 49 SHEET 3 AA9 4 ILE B 69 GLY B 73 -1 O LYS B 70 N SER B 62 SHEET 4 AA9 4 PHE B 79 ILE B 83 -1 O ILE B 83 N ILE B 69 SHEET 1 AB1 4 ILE B 90 ALA B 94 0 SHEET 2 AB1 4 LEU B 101 SER B 106 -1 O VAL B 103 N ALA B 94 SHEET 3 AB1 4 LEU B 111 ASP B 115 -1 O TRP B 114 N LEU B 102 SHEET 4 AB1 4 CYS B 121 LEU B 125 -1 O LYS B 123 N ILE B 113 SHEET 1 AB2 4 VAL B 132 ASN B 136 0 SHEET 2 AB2 4 LEU B 143 SER B 148 -1 O GLY B 147 N CYS B 134 SHEET 3 AB2 4 VAL B 153 ASP B 157 -1 O TRP B 156 N ILE B 144 SHEET 4 AB2 4 CYS B 163 LEU B 167 -1 O LEU B 164 N ILE B 155 SHEET 1 AB3 4 VAL B 177 PHE B 179 0 SHEET 2 AB3 4 LEU B 185 SER B 188 -1 O VAL B 187 N HIS B 178 SHEET 3 AB3 4 CYS B 195 ASP B 199 -1 O TRP B 198 N ILE B 186 SHEET 4 AB3 4 CYS B 205 LEU B 209 -1 O LYS B 207 N ILE B 197 SHEET 1 AB4 4 VAL B 217 PHE B 222 0 SHEET 2 AB4 4 TYR B 228 THR B 233 -1 O LEU B 230 N LYS B 221 SHEET 3 AB4 4 THR B 237 ASP B 242 -1 O LYS B 239 N ALA B 231 SHEET 4 AB4 4 LYS B 247 THR B 253 -1 O TYR B 252 N LEU B 238 SHEET 1 AB5 4 ASN B 265 SER B 267 0 SHEET 2 AB5 4 TRP B 273 GLY B 277 -1 O VAL B 275 N ASN B 265 SHEET 3 AB5 4 VAL B 283 ASN B 287 -1 O TRP B 286 N ILE B 274 SHEET 4 AB5 4 GLN B 295 LEU B 297 -1 O GLN B 295 N ILE B 285 CISPEP 1 GLN A 1158 PRO A 1159 0 -7.06 CRYST1 47.597 83.185 158.152 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.021010 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012021 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006323 0.00000