HEADER HYDROLASE 10-APR-24 9BCZ TITLE CHICKEN 1-PHOSPHATIDYLINOSITOL 4,5-BISPHOSPHATE PHOSPHODIESTERASE TITLE 2 ZETA-1 (PLCZ1) IN COMPLEX WITH CALCIUM AND PHOSPHORYLATED THREONINE COMPND MOL_ID: 1; COMPND 2 MOLECULE: 1-PHOSPHATIDYLINOSITOL 4,5-BISPHOSPHATE PHOSPHODIESTERASE COMPND 3 ZETA-1; COMPND 4 CHAIN: A; COMPND 5 SYNONYM: PHOSPHOINOSITIDE PHOSPHOLIPASE C-ZETA-1,PHOSPHOLIPASE C- COMPND 6 ZETA-1,PLC-ZETA-1; COMPND 7 EC: 3.1.4.11; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: GALLUS GALLUS; SOURCE 3 ORGANISM_COMMON: CHICKEN; SOURCE 4 ORGANISM_TAXID: 9031; SOURCE 5 GENE: PLCZ1; SOURCE 6 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 7108 KEYWDS PHOSPHOLIPASE-C, LIPID-METABOLISM, CALCIUM-BINDING, OOCYTE- KEYWDS 2 ACTIVATION, STRUCTURAL GENOMICS, PSI-2, PROTEIN STRUCTURE KEYWDS 3 INITIATIVE, STRUCTURAL GENOMICS CONSORTIUM, SGC, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR M.M.EDWARDS,A.DONG,N.THEO-EMEGANO,A.SEITOVA,P.LOPPNAU,R.LEUNG,H.LI, AUTHOR 2 O.ILYASSOV,A.M.EDWARDS,C.H.ARROWSMITH,STRUCTURAL GENOMICS AUTHOR 3 CONSORTIUM,STRUCTURAL GENOMICS CONSORTIUM (SGC) REVDAT 1 15-MAY-24 9BCZ 0 JRNL AUTH M.M.EDWARDS,A.DONG,N.THEO-EMEGANO,A.SEITOVA,P.LOPPNAU, JRNL AUTH 2 R.LEUNG,H.LI,O.ILYASSOV,A.M.EDWARDS,C.H.ARROWSMITH, JRNL AUTH 3 STRUCTURAL GENOMICS CONSORTIUM JRNL TITL CHICKEN 1-PHOSPHATIDYLINOSITOL 4,5-BISPHOSPHATE JRNL TITL 2 PHOSPHODIESTERASE ZETA-1 (PLCZ1) IN COMPLEX WITH CALCIUM AND JRNL TITL 3 PHOSPHORYLATED THREONINE JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.99 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0415 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.99 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 49.59 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 94.1 REMARK 3 NUMBER OF REFLECTIONS : 57477 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.174 REMARK 3 R VALUE (WORKING SET) : 0.173 REMARK 3 FREE R VALUE : 0.204 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2998 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.99 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.04 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3039 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 67.77 REMARK 3 BIN R VALUE (WORKING SET) : 0.2640 REMARK 3 BIN FREE R VALUE SET COUNT : 155 REMARK 3 BIN FREE R VALUE : 0.2980 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4818 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 45 REMARK 3 SOLVENT ATOMS : 156 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 28.35 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.34000 REMARK 3 B22 (A**2) : -1.77000 REMARK 3 B33 (A**2) : 2.75000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -1.91000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.132 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.126 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.100 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 3.784 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.960 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.945 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 5063 ; 0.008 ; 0.012 REMARK 3 BOND LENGTHS OTHERS (A): 4713 ; 0.001 ; 0.016 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 6860 ; 1.581 ; 1.657 REMARK 3 BOND ANGLES OTHERS (DEGREES): 10889 ; 0.507 ; 1.574 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 635 ; 7.099 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 25 ; 8.501 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 857 ;14.475 ;10.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 757 ; 0.073 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 5908 ; 0.008 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 1182 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2466 ; 2.748 ; 2.731 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 2466 ; 2.736 ; 2.731 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3091 ; 4.078 ; 4.898 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 3092 ; 4.078 ; 4.900 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2597 ; 3.875 ; 3.130 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 2595 ; 3.859 ; 3.128 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 3758 ; 6.000 ; 5.531 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 5556 ; 7.670 ;27.190 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 5529 ; 7.651 ;27.180 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 9BCZ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 11-APR-24. REMARK 100 THE DEPOSITION ID IS D_1000283070. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 14-FEB-24 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : CLSI REMARK 200 BEAMLINE : 08ID-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.95307 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 9M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 60478 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.990 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 94.7 REMARK 200 DATA REDUNDANCY : 6.000 REMARK 200 R MERGE (I) : 0.16300 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 6.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.03 REMARK 200 COMPLETENESS FOR SHELL (%) : 75.8 REMARK 200 DATA REDUNDANCY IN SHELL : 4.30 REMARK 200 R MERGE FOR SHELL (I) : 0.92700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 62.60 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.29 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M NAHEPES, MOPS ACIDIC PH 7.5, 20% REMARK 280 PEG 550 MME & 10% PEG 20,000, 0.2 M MONOSACCHARIDES, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 61.09100 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 42.76950 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 61.09100 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 42.76950 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 333 REMARK 465 ASP A 334 REMARK 465 GLU A 335 REMARK 465 GLU A 336 REMARK 465 THR A 337 REMARK 465 ASP A 338 REMARK 465 GLU A 339 REMARK 465 LYS A 340 REMARK 465 THR A 341 REMARK 465 PRO A 342 REMARK 465 LEU A 343 REMARK 465 TYR A 344 REMARK 465 PRO A 345 REMARK 465 LYS A 346 REMARK 465 SER A 347 REMARK 465 GLY A 348 REMARK 465 SER A 349 REMARK 465 SER A 350 REMARK 465 LYS A 351 REMARK 465 ARG A 352 REMARK 465 LYS A 353 REMARK 465 SER A 354 REMARK 465 GLU A 355 REMARK 465 GLY A 356 REMARK 465 ARG A 357 REMARK 465 SER A 358 REMARK 465 SER A 359 REMARK 465 PRO A 360 REMARK 465 PRO A 361 REMARK 465 PRO A 362 REMARK 465 ARG A 363 REMARK 465 LYS A 364 REMARK 465 LYS A 365 REMARK 465 ALA A 366 REMARK 465 LYS A 367 REMARK 465 VAL A 368 REMARK 465 LYS A 369 REMARK 465 GLN A 644 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 27 CD CE NZ REMARK 470 LYS A 31 CE NZ REMARK 470 ASP A 50 CG OD1 OD2 REMARK 470 LYS A 51 CB CG CD CE NZ REMARK 470 LYS A 53 CB CG CD CE NZ REMARK 470 ILE A 54 CG1 CG2 CD1 REMARK 470 GLU A 84 CB CG CD OE1 OE2 REMARK 470 GLU A 109 CB CG CD OE1 OE2 REMARK 470 THR A 110 CB OG1 CG2 REMARK 470 GLU A 124 CD OE1 OE2 REMARK 470 LYS A 150 CD CE NZ REMARK 470 LYS A 257 CD CE NZ REMARK 470 ILE A 282 CD1 REMARK 470 GLU A 283 CB CG CD OE1 OE2 REMARK 470 LYS A 370 CG CD CE NZ REMARK 470 LYS A 400 CE NZ REMARK 470 LYS A 414 CE NZ REMARK 470 LYS A 551 CE NZ REMARK 470 LYS A 624 CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 106 94.79 68.80 REMARK 500 ASN A 173 64.92 35.50 REMARK 500 SER A 178 -115.33 -137.88 REMARK 500 SER A 178 -116.75 -135.86 REMARK 500 LYS A 302 151.06 -49.62 REMARK 500 ILE A 382 -61.84 -121.37 REMARK 500 ALA A 419 42.74 -147.93 REMARK 500 ASN A 503 88.38 -158.65 REMARK 500 SER A 531 -101.52 -128.32 REMARK 500 ASN A 532 31.17 -145.47 REMARK 500 ASP A 535 75.70 -111.44 REMARK 500 SER A 563 46.37 -149.70 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 ARG A 129 0.10 SIDE CHAIN REMARK 500 ARG A 552 0.09 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 705 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN A 173 OD1 REMARK 620 2 GLU A 202 OE1 86.2 REMARK 620 3 ASP A 204 OD1 91.6 84.6 REMARK 620 4 ASP A 204 OD2 82.3 136.0 53.6 REMARK 620 5 GLU A 251 OE2 173.1 88.5 92.3 104.6 REMARK 620 6 TPO A 331 O3P 91.0 128.7 146.8 94.0 88.9 REMARK 620 N 1 2 3 4 5 DBREF 9BCZ A 1 637 UNP Q2VRL0 PLCZ1_CHICK 1 637 SEQADV 9BCZ ALA A 638 UNP Q2VRL0 EXPRESSION TAG SEQADV 9BCZ GLU A 639 UNP Q2VRL0 EXPRESSION TAG SEQADV 9BCZ ASN A 640 UNP Q2VRL0 EXPRESSION TAG SEQADV 9BCZ LEU A 641 UNP Q2VRL0 EXPRESSION TAG SEQADV 9BCZ TYR A 642 UNP Q2VRL0 EXPRESSION TAG SEQADV 9BCZ PHE A 643 UNP Q2VRL0 EXPRESSION TAG SEQADV 9BCZ GLN A 644 UNP Q2VRL0 EXPRESSION TAG SEQRES 1 A 644 MET GLU GLU ASN ARG TRP PHE LEU ASN ILE ILE GLN ASP SEQRES 2 A 644 GLY PHE MET ASN GLY LYS ILE ASP PHE ASP SER THR VAL SEQRES 3 A 644 LYS LEU LEU GLU LYS LEU HIS MET PRO PHE ASN LEU ALA SEQRES 4 A 644 HIS VAL LYS HIS VAL PHE LYS LYS THR VAL ASP LYS ARG SEQRES 5 A 644 LYS ILE HIS THR ILE ASN ILE GLU ASP PHE ARG ALA ILE SEQRES 6 A 644 TYR ARG ALA ILE VAL HIS ARG ASN GLU PHE HIS GLU ILE SEQRES 7 A 644 PHE CYS ALA TYR SER GLU ASN ARG LYS ASN LEU ALA ASP SEQRES 8 A 644 THR GLU LEU THR ALA PHE LEU LYS LYS GLU GLN PHE LYS SEQRES 9 A 644 THR GLU GLY ALA GLU THR THR ALA LEU GLU VAL ILE LEU SEQRES 10 A 644 LYS TYR GLU PRO ILE ASP GLU VAL ARG LYS ARG ARG GLN SEQRES 11 A 644 LEU SER PHE GLU GLY PHE ILE ARG TYR MET SER SER GLU SEQRES 12 A 644 ASP CYS THR ILE PHE LYS LYS GLU HIS ARG THR VAL TYR SEQRES 13 A 644 GLN ASP MET ASN HIS PRO LEU CYS ASP TYR PHE ILE SER SEQRES 14 A 644 SER SER HIS ASN THR TYR LEU VAL SER ASP GLN LEU ILE SEQRES 15 A 644 GLY PRO SER ASP LEU ASN GLY TYR ILE SER ALA LEU LEU SEQRES 16 A 644 LYS GLY CYS ARG CYS LEU GLU ILE ASP CYS TRP ASP GLY SEQRES 17 A 644 SER ASN ASN ASP PRO VAL VAL TYR HIS GLY HIS THR LEU SEQRES 18 A 644 THR SER LYS ILE THR PHE CYS SER VAL ILE HIS VAL VAL SEQRES 19 A 644 ASP LYS TYR ALA PHE ALA ALA SER ASP TYR PRO VAL VAL SEQRES 20 A 644 LEU SER LEU GLU ASN HIS CYS SER THR LYS GLN GLN GLU SEQRES 21 A 644 ARG ILE ALA GLN TYR LEU LEU ASN ILE LEU GLY ASP LYS SEQRES 22 A 644 LEU LEU THR SER PRO ILE GLY ASP ILE GLU VAL THR GLN SEQRES 23 A 644 LEU PRO SER PRO GLU ALA LEU LYS PHE LYS ILE LEU VAL SEQRES 24 A 644 LYS ASN LYS LYS CYS GLY THR ILE GLU GLU THR MET LEU SEQRES 25 A 644 ARG LYS GLY ARG ASP SER HIS GLY GLU THR GLY GLU VAL SEQRES 26 A 644 SEP GLU GLU GLU ILE TPO SER SER ASP GLU GLU THR ASP SEQRES 27 A 644 GLU LYS THR PRO LEU TYR PRO LYS SER GLY SER SER LYS SEQRES 28 A 644 ARG LYS SER GLU GLY ARG SER SER PRO PRO PRO ARG LYS SEQRES 29 A 644 LYS ALA LYS VAL LYS LYS MET LYS ILE ALA MET GLY LEU SEQRES 30 A 644 SER ASP LEU VAL ILE TYR THR LYS SER GLU LYS PHE VAL SEQRES 31 A 644 SER PHE GLU HIS SER LEU ALA HIS GLN LYS CYS TYR GLU SEQRES 32 A 644 ASN ASN SER ILE GLY GLU LEU LYS ALA GLN LYS PHE VAL SEQRES 33 A 644 LYS HIS ALA ALA ASN GLN PHE VAL SER HIS THR SER ARG SEQRES 34 A 644 PHE ILE THR ARG ILE TYR PRO LYS GLY THR ARG ALA GLY SEQRES 35 A 644 SER SER ASN TYR ASN PRO GLN GLU PHE TRP ASN VAL GLY SEQRES 36 A 644 CYS GLN MET VAL ALA LEU ASN PHE GLN THR SER GLY THR SEQRES 37 A 644 PRO MET GLU LEU GLN ASN GLY LYS PHE LEU ASP ASN GLY SEQRES 38 A 644 GLY CYS GLY TYR ILE LEU LYS PRO GLU PHE LEU ARG ASN SEQRES 39 A 644 ARG ASN SER THR PHE ASN PRO HIS ASN VAL GLY ARG TYR SEQRES 40 A 644 SER ASN PRO LEU SER LEU SER ILE ARG LEU ILE SER GLY SEQRES 41 A 644 HIS GLN LEU PRO PRO SER ASN LEU SER LYS SER ASN LYS SEQRES 42 A 644 ALA ASP PRO LEU VAL GLN LEU GLU ILE TYR GLY VAL PRO SEQRES 43 A 644 GLU ASP GLN ALA LYS ARG LYS SER SER VAL ILE LYS SER SEQRES 44 A 644 ASN ALA LEU SER PRO ARG TRP ASP GLU THR PHE SER PHE SEQRES 45 A 644 THR VAL GLN VAL PRO GLU LEU ALA LEU ILE ARG PHE CYS SEQRES 46 A 644 VAL GLN ASP GLU ILE SER LEU VAL ALA ASN ASP PHE LEU SEQRES 47 A 644 GLY GLN TYR THR LEU PRO LEU LEU SER LEU SER LYS GLY SEQRES 48 A 644 TYR CYS THR VAL PRO LEU PHE SER LYS SER GLY GLY LYS SEQRES 49 A 644 LEU GLU PRO ALA SER LEU PHE VAL TYR VAL TRP TYR TYR SEQRES 50 A 644 ALA GLU ASN LEU TYR PHE GLN MODRES 9BCZ SEP A 326 SER MODIFIED RESIDUE MODRES 9BCZ TPO A 331 THR MODIFIED RESIDUE HET SEP A 326 10 HET TPO A 331 11 HET PEG A 701 7 HET PEG A 702 7 HET PEG A 703 7 HET EPE A 704 15 HET CA A 705 1 HET NA A 706 1 HET CL A 707 1 HET CL A 708 1 HET UNX A 709 1 HET UNX A 710 1 HET UNX A 711 1 HET UNX A 712 1 HET UNX A 713 1 HETNAM SEP PHOSPHOSERINE HETNAM TPO PHOSPHOTHREONINE HETNAM PEG DI(HYDROXYETHYL)ETHER HETNAM EPE 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID HETNAM CA CALCIUM ION HETNAM NA SODIUM ION HETNAM CL CHLORIDE ION HETNAM UNX UNKNOWN ATOM OR ION HETSYN SEP PHOSPHONOSERINE HETSYN TPO PHOSPHONOTHREONINE HETSYN EPE HEPES FORMUL 1 SEP C3 H8 N O6 P FORMUL 1 TPO C4 H10 N O6 P FORMUL 2 PEG 3(C4 H10 O3) FORMUL 5 EPE C8 H18 N2 O4 S FORMUL 6 CA CA 2+ FORMUL 7 NA NA 1+ FORMUL 8 CL 2(CL 1-) FORMUL 10 UNX 5(X) FORMUL 15 HOH *156(H2 O) HELIX 1 AA1 MET A 1 GLN A 12 1 12 HELIX 2 AA2 ASP A 13 MET A 16 5 4 HELIX 3 AA3 ASP A 21 LYS A 31 1 11 HELIX 4 AA4 ASN A 37 ASP A 50 1 14 HELIX 5 AA5 ASN A 58 HIS A 71 1 14 HELIX 6 AA6 ARG A 72 GLU A 84 1 13 HELIX 7 AA7 ASP A 91 PHE A 103 1 13 HELIX 8 AA8 GLY A 107 GLU A 120 1 14 HELIX 9 AA9 ILE A 122 ARG A 128 1 7 HELIX 10 AB1 PHE A 133 SER A 141 1 9 HELIX 11 AB2 SER A 142 THR A 146 5 5 HELIX 12 AB3 LYS A 149 THR A 154 5 6 HELIX 13 AB4 PRO A 162 CYS A 164 5 3 HELIX 14 AB5 LEU A 187 LYS A 196 1 10 HELIX 15 AB6 GLY A 208 ASP A 212 5 5 HELIX 16 AB7 PHE A 227 ALA A 238 1 12 HELIX 17 AB8 SER A 255 GLY A 271 1 17 HELIX 18 AB9 ASP A 272 LEU A 274 5 3 HELIX 19 AC1 THR A 306 LYS A 314 1 9 HELIX 20 AC2 MET A 375 ASP A 379 1 5 HELIX 21 AC3 SER A 391 GLN A 399 1 9 HELIX 22 AC4 GLU A 409 ALA A 419 1 11 HELIX 23 AC5 ALA A 419 PHE A 430 1 12 HELIX 24 AC6 PRO A 448 ASN A 453 1 6 HELIX 25 AC7 GLY A 467 PHE A 477 1 11 HELIX 26 AC8 LEU A 478 CYS A 483 5 6 HELIX 27 AC9 PRO A 489 ASN A 494 1 6 HELIX 28 AD1 VAL A 504 SER A 508 5 5 HELIX 29 AD2 VAL A 545 GLN A 549 5 5 HELIX 30 AD3 VAL A 576 LEU A 579 5 4 HELIX 31 AD4 LEU A 606 LEU A 608 5 3 HELIX 32 AD5 ASN A 640 TYR A 642 5 3 SHEET 1 AA1 2 ASN A 88 ALA A 90 0 SHEET 2 AA1 2 GLN A 130 SER A 132 -1 O LEU A 131 N LEU A 89 SHEET 1 AA2 2 TYR A 166 ILE A 168 0 SHEET 2 AA2 2 TYR A 485 LEU A 487 -1 O ILE A 486 N PHE A 167 SHEET 1 AA3 5 ILE A 225 THR A 226 0 SHEET 2 AA3 5 VAL A 214 VAL A 215 -1 N VAL A 215 O ILE A 225 SHEET 3 AA3 5 CYS A 200 TRP A 206 -1 N TRP A 206 O VAL A 214 SHEET 4 AA3 5 VAL A 246 ASN A 252 1 O SER A 249 N LEU A 201 SHEET 5 AA3 5 ILE A 297 LYS A 300 1 O LYS A 300 N LEU A 248 SHEET 1 AA4 2 THR A 322 VAL A 325 0 SHEET 2 AA4 2 MET A 371 ALA A 374 -1 O ILE A 373 N GLY A 323 SHEET 1 AA5 4 LYS A 385 SER A 386 0 SHEET 2 AA5 4 GLU A 403 GLY A 408 1 O ASN A 404 N LYS A 385 SHEET 3 AA5 4 THR A 432 TYR A 435 1 O ARG A 433 N ILE A 407 SHEET 4 AA5 4 MET A 458 VAL A 459 1 O MET A 458 N THR A 432 SHEET 1 AA6 4 ARG A 565 VAL A 574 0 SHEET 2 AA6 4 LEU A 511 HIS A 521 -1 N LEU A 517 O GLU A 568 SHEET 3 AA6 4 LYS A 624 ALA A 638 -1 O TYR A 633 N ARG A 516 SHEET 4 AA6 4 GLY A 611 PHE A 618 -1 N GLY A 611 O VAL A 634 SHEET 1 AA7 4 ALA A 550 LYS A 553 0 SHEET 2 AA7 4 PRO A 536 TYR A 543 -1 N LEU A 540 O ARG A 552 SHEET 3 AA7 4 LEU A 581 SER A 591 -1 O CYS A 585 N GLN A 539 SHEET 4 AA7 4 ALA A 594 PRO A 604 -1 O GLY A 599 N VAL A 586 LINK C VAL A 325 N SEP A 326 1555 1555 1.35 LINK C SEP A 326 N GLU A 327 1555 1555 1.34 LINK C ILE A 330 N TPO A 331 1555 1555 1.34 LINK C TPO A 331 N SER A 332 1555 1555 1.35 LINK OD1 ASN A 173 CA CA A 705 1555 1555 2.39 LINK OE1 GLU A 202 CA CA A 705 1555 1555 2.38 LINK OD1 ASP A 204 CA CA A 705 1555 1555 2.44 LINK OD2 ASP A 204 CA CA A 705 1555 1555 2.42 LINK OE2 GLU A 251 CA CA A 705 1555 1555 2.38 LINK O3P TPO A 331 CA CA A 705 1555 1555 2.34 CISPEP 1 GLU A 626 PRO A 627 0 13.59 CRYST1 122.182 85.539 98.433 90.00 112.04 90.00 C 1 2 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008185 0.000000 0.003313 0.00000 SCALE2 0.000000 0.011691 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010960 0.00000