HEADER VIRAL PROTEIN 11-APR-24 9BDH TITLE CRYSTAL STRUCTURE OF HIV-1 MPER SCAFFOLD IN COMPLEX WITH ANTIBODY FAB TITLE 2 AB45.1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: FAB 45.1 HEAVY CHAIN; COMPND 3 CHAIN: H; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: FAB 45.1 LIGHT CHAIN; COMPND 7 CHAIN: L; COMPND 8 ENGINEERED: YES; COMPND 9 MOL_ID: 3; COMPND 10 MOLECULE: GT10.2; COMPND 11 CHAIN: C; COMPND 12 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: HOUSE MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 EXPRESSION_SYSTEM: MUS MUSCULUS; SOURCE 6 EXPRESSION_SYSTEM_COMMON: HOUSE MOUSE; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 10090; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 10 ORGANISM_COMMON: HOUSE MOUSE; SOURCE 11 ORGANISM_TAXID: 10090; SOURCE 12 EXPRESSION_SYSTEM: MUS MUSCULUS; SOURCE 13 EXPRESSION_SYSTEM_COMMON: HOUSE MOUSE; SOURCE 14 EXPRESSION_SYSTEM_TAXID: 10090; SOURCE 15 MOL_ID: 3; SOURCE 16 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 17 ORGANISM_COMMON: HOUSE MOUSE; SOURCE 18 ORGANISM_TAXID: 10090; SOURCE 19 EXPRESSION_SYSTEM: MUS MUSCULUS; SOURCE 20 EXPRESSION_SYSTEM_COMMON: HOUSE MOUSE; SOURCE 21 EXPRESSION_SYSTEM_TAXID: 10090 KEYWDS MEMBRANE-PROXIMAL EXTERNAL REGION (MPER), HIV-1, GERMLINE TARGETING, KEYWDS 2 B CELL, GERMINAL CENTER, VIRAL PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR C.C.D.LEE,I.A.WILSON REVDAT 1 19-FEB-25 9BDH 0 JRNL AUTH R.RAY,T.SCHIFFNER,X.WANG,Y.YAN,K.RANTALAINEN,C.D.LEE, JRNL AUTH 2 S.PARIKH,R.A.REYES,G.A.DALE,Y.C.LIN,S.PECETTA,S.GIGUERE, JRNL AUTH 3 O.SWANSON,S.KRATOCHVIL,E.MELZI,I.PHUNG,L.MADUNGWE, JRNL AUTH 4 O.KALYUZHNIY,J.WARNER,S.R.WELDON,R.TINGLE,E.LAMPERTI, JRNL AUTH 5 K.H.KIRSCH,N.PHELPS,E.GEORGESON,Y.ADACHI,M.KUBITZ,U.NAIR, JRNL AUTH 6 S.CROTTY,I.A.WILSON,W.R.SCHIEF,F.D.BATISTA JRNL TITL AFFINITY GAPS AMONG B CELLS IN GERMINAL CENTERS DRIVE THE JRNL TITL 2 SELECTION OF MPER PRECURSORS. JRNL REF NAT.IMMUNOL. V. 25 1083 2024 JRNL REFN ESSN 1529-2916 JRNL PMID 38816616 JRNL DOI 10.1038/S41590-024-01844-7 REMARK 2 REMARK 2 RESOLUTION. 3.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.21RC1_5127 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 49.24 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.330 REMARK 3 COMPLETENESS FOR RANGE (%) : 95.8 REMARK 3 NUMBER OF REFLECTIONS : 40382 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.270 REMARK 3 R VALUE (WORKING SET) : 0.269 REMARK 3 FREE R VALUE : 0.290 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.080 REMARK 3 FREE R VALUE TEST SET COUNT : 2053 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 49.2400 - 7.3800 1.00 2763 174 0.2006 0.1967 REMARK 3 2 7.3700 - 5.8600 0.99 2699 141 0.2442 0.2619 REMARK 3 3 5.8600 - 5.1200 0.99 2663 136 0.2222 0.2225 REMARK 3 4 5.1200 - 4.6500 0.99 2672 130 0.2113 0.2257 REMARK 3 5 4.6500 - 4.3200 0.99 2623 169 0.2187 0.2273 REMARK 3 6 4.3200 - 4.0600 0.99 2639 128 0.2468 0.2655 REMARK 3 7 4.0600 - 3.8600 0.99 2643 115 0.2983 0.3603 REMARK 3 8 3.8600 - 3.6900 0.98 2588 171 0.3307 0.3708 REMARK 3 9 3.6900 - 3.5500 0.99 2637 143 0.3343 0.4077 REMARK 3 10 3.5500 - 3.4300 1.00 2622 147 0.3028 0.3854 REMARK 3 11 3.4300 - 3.3200 1.00 2651 123 0.3077 0.3616 REMARK 3 12 3.3200 - 3.2200 0.99 2612 167 0.3324 0.3766 REMARK 3 13 3.2200 - 3.1400 0.99 2627 144 0.3507 0.3929 REMARK 3 14 3.1400 - 3.0600 0.99 2639 112 0.3640 0.4406 REMARK 3 15 3.0600 - 3.0000 0.47 1251 53 0.6095 0.6037 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.540 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 34.473 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 55.15 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 74.63 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.003 4746 REMARK 3 ANGLE : 0.538 6451 REMARK 3 CHIRALITY : 0.043 730 REMARK 3 PLANARITY : 0.005 822 REMARK 3 DIHEDRAL : 17.042 1715 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 9BDH COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 12-APR-24. REMARK 100 THE DEPOSITION ID IS D_1000283131. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 24-APR-21 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 5.0.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97741 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 2M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 41850 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.000 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 7.500 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 5.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.05 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 7.50 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 84.55 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 7.96 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 2M AMMONIUM SULFATE, VAPOR DIFFUSION, REMARK 280 SITTING DROP, TEMPERATURE 293.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+2/3 REMARK 290 6555 -X,-X+Y,-Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 31.07767 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 62.15533 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 62.15533 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 31.07767 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: H, L, C, A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O TYR L 192 OH TYR L 198 2.10 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER H 40 -178.00 -69.58 REMARK 500 ALA H 66 -4.23 67.33 REMARK 500 ARG H 99 -72.57 -61.30 REMARK 500 PHE H 102 -70.75 -73.50 REMARK 500 ARG H 104 -9.80 -150.48 REMARK 500 SER H 139 -122.97 51.97 REMARK 500 ASP H 153 73.71 59.35 REMARK 500 SER H 196 3.05 -69.79 REMARK 500 SER L 34 -148.61 57.98 REMARK 500 LEU L 53 -62.33 -101.25 REMARK 500 ALA L 57 -0.07 66.60 REMARK 500 SER L 58 -17.49 -150.87 REMARK 500 ALA L 90 -171.82 -170.08 REMARK 500 ASN L 144 75.52 54.76 REMARK 500 ASN L 158 -5.86 72.18 REMARK 500 ASP C 26 48.19 -90.33 REMARK 500 LYS C 45 -33.39 -39.96 REMARK 500 LEU C 55 -74.28 -64.97 REMARK 500 GLN C 80 -132.95 49.14 REMARK 500 SER C 81 82.87 52.06 REMARK 500 PRO C 82 46.38 -65.53 REMARK 500 ASN C 142 -151.65 -76.69 REMARK 500 REMARK 500 REMARK: NULL DBREF 9BDH H 1 225 PDB 9BDH 9BDH 1 225 DBREF 9BDH L 3 220 PDB 9BDH 9BDH 3 220 DBREF 9BDH C 4 156 PDB 9BDH 9BDH 4 156 SEQRES 1 H 225 GLU VAL GLN LEU GLN GLN SER GLY PRO GLU LEU VAL LYS SEQRES 2 H 225 PRO GLY ALA SER VAL LYS ILE SER CYS LYS ALA SER GLY SEQRES 3 H 225 TYR THR PHE THR ASP TYR TYR MET ASN TRP VAL LYS GLN SEQRES 4 H 225 SER HIS GLY LYS SER LEU GLU TRP ILE GLY ASP ILE ASN SEQRES 5 H 225 PRO ASN SER GLY GLY SER SER TYR ASN GLN LYS PHE LYS SEQRES 6 H 225 ALA ARG ALA THR LEU THR VAL ASP LYS SER SER SER THR SEQRES 7 H 225 ALA TYR MET GLU LEU ARG SER LEU THR SER GLU ASP SER SEQRES 8 H 225 ALA VAL TYR TYR CYS VAL LYS ARG GLY ASP PHE LEU ARG SEQRES 9 H 225 GLY TYR TRP TYR PHE ASP VAL TRP GLY THR GLY THR THR SEQRES 10 H 225 VAL THR VAL SER SER ALA SER THR LYS GLY PRO SER VAL SEQRES 11 H 225 PHE PRO LEU ALA PRO SER SER LYS SER THR SER GLY GLY SEQRES 12 H 225 THR ALA ALA LEU GLY CYS LEU VAL LYS ASP TYR PHE PRO SEQRES 13 H 225 GLU PRO VAL THR VAL SER TRP ASN SER GLY ALA LEU THR SEQRES 14 H 225 SER GLY VAL HIS THR PHE PRO ALA VAL LEU GLN SER SER SEQRES 15 H 225 GLY LEU TYR SER LEU SER SER VAL VAL THR VAL PRO SER SEQRES 16 H 225 SER SER LEU GLY THR GLN THR TYR ILE CYS ASN VAL ASN SEQRES 17 H 225 HIS LYS PRO SER ASN THR LYS VAL ASP LYS LYS VAL GLU SEQRES 18 H 225 PRO LYS SER CYS SEQRES 1 L 218 ASP ILE VAL MET THR GLN SER PRO ALA SER LEU ALA VAL SEQRES 2 L 218 SER LEU GLY GLN ARG ALA THR ILE SER CYS ARG ALA SER SEQRES 3 L 218 LYS SER VAL SER THR SER GLY TYR ASN TYR MET HIS TRP SEQRES 4 L 218 TYR GLN GLN LYS PRO GLY GLN PRO PRO LYS LEU LEU ILE SEQRES 5 L 218 TYR LEU ALA SER ASN LEU GLU SER GLY VAL PRO VAL ARG SEQRES 6 L 218 PHE SER GLY SER GLY SER GLY THR ASP PHE THR LEU ASN SEQRES 7 L 218 ILE HIS PRO VAL GLU GLU GLU ASP VAL ALA THR TYR TYR SEQRES 8 L 218 CYS GLN HIS SER ARG GLU LEU PRO PHE THR PHE GLY SER SEQRES 9 L 218 GLY THR LYS LEU GLU ILE LYS ARG THR VAL ALA ALA PRO SEQRES 10 L 218 SER VAL PHE ILE PHE PRO PRO SER ASP GLU GLN LEU LYS SEQRES 11 L 218 SER GLY THR ALA SER VAL VAL CYS LEU LEU ASN ASN PHE SEQRES 12 L 218 TYR PRO ARG GLU ALA LYS VAL GLN TRP LYS VAL ASP ASN SEQRES 13 L 218 ALA LEU GLN SER GLY ASN SER GLN GLU SER VAL THR GLU SEQRES 14 L 218 GLN ASP SER LYS ASP SER THR TYR SER LEU SER SER THR SEQRES 15 L 218 LEU THR LEU SER LYS ALA ASP TYR GLU LYS HIS LYS VAL SEQRES 16 L 218 TYR ALA CYS GLU VAL THR HIS GLN GLY LEU SER SER PRO SEQRES 17 L 218 VAL THR LYS SER PHE ASN ARG GLY GLU CYS SEQRES 1 C 153 VAL THR GLN GLU ASP ILE ILE ARG ALA LEU ALA SER PRO SEQRES 2 C 153 LEU ILE LYS ASP GLY MET VAL ASP GLU ASP PHE ALA GLU SEQRES 3 C 153 TYR VAL ILE ALA ARG GLU ASN ARG SER PRO THR GLY LEU SEQRES 4 C 153 GLN ALA LYS GLY VAL GLY VAL ALA ILE PRO HIS THR LEU SEQRES 5 C 153 GLY ASP TYR VAL ARG ASP ASN ALA ILE SER VAL GLY ILE SEQRES 6 C 153 LEU ASP LYS PRO VAL ASN PHE SER GLY TRP TYR GLN SER SEQRES 7 C 153 PRO ASP PRO VAL PRO VAL ARG VAL VAL PHE MET LEU ALA SEQRES 8 C 153 GLY ARG THR TRP ASP ASP ILE VAL ILE VAL LEU LYS TRP SEQRES 9 C 153 ILE LYS ASP VAL ILE LEU ASP GLU GLU PHE MET LYS ARG SEQRES 10 C 153 LEU LEU ASN MET SER ASP GLU GLU ILE TYR ARG GLN ILE SEQRES 11 C 153 TYR THR ARG ILE SER LYS ALA PRO ASN LEU SER GLY ILE SEQRES 12 C 153 ASN PHE SER ARG GLU TYR VAL ARG HIS LEU HET NAG A 1 14 HET NAG A 2 14 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE FORMUL 4 NAG 2(C8 H15 N O6) HELIX 1 AA1 THR H 28 TYR H 32 5 5 HELIX 2 AA2 THR H 87 SER H 91 5 5 HELIX 3 AA3 SER H 165 ALA H 167 5 3 HELIX 4 AA4 SER H 196 LEU H 198 5 3 HELIX 5 AA5 LYS H 210 ASN H 213 5 4 HELIX 6 AA6 GLU L 85 VAL L 89 5 5 HELIX 7 AA7 SER L 127 LYS L 132 1 6 HELIX 8 AA8 LYS L 189 GLU L 193 1 5 HELIX 9 AA9 THR C 5 ASP C 20 1 16 HELIX 10 AB1 ASP C 26 ASN C 36 1 11 HELIX 11 AB2 THR C 97 ILE C 112 1 16 HELIX 12 AB3 ASP C 114 ASN C 123 1 10 HELIX 13 AB4 SER C 125 ALA C 140 1 16 HELIX 14 AB5 SER C 149 GLU C 151 5 3 SHEET 1 AA1 4 GLN H 3 GLN H 6 0 SHEET 2 AA1 4 VAL H 18 SER H 25 -1 O LYS H 23 N GLN H 5 SHEET 3 AA1 4 THR H 78 LEU H 83 -1 O ALA H 79 N CYS H 22 SHEET 4 AA1 4 ALA H 68 ASP H 73 -1 N THR H 71 O TYR H 80 SHEET 1 AA2 6 GLU H 10 VAL H 12 0 SHEET 2 AA2 6 THR H 116 VAL H 120 1 O THR H 119 N GLU H 10 SHEET 3 AA2 6 ALA H 92 LYS H 98 -1 N ALA H 92 O VAL H 118 SHEET 4 AA2 6 MET H 34 GLN H 39 -1 N VAL H 37 O TYR H 95 SHEET 5 AA2 6 LEU H 45 ILE H 51 -1 O GLU H 46 N LYS H 38 SHEET 6 AA2 6 SER H 58 TYR H 60 -1 O SER H 59 N ASP H 50 SHEET 1 AA3 4 GLU H 10 VAL H 12 0 SHEET 2 AA3 4 THR H 116 VAL H 120 1 O THR H 119 N GLU H 10 SHEET 3 AA3 4 ALA H 92 LYS H 98 -1 N ALA H 92 O VAL H 118 SHEET 4 AA3 4 VAL H 111 TRP H 112 -1 O VAL H 111 N LYS H 98 SHEET 1 AA4 4 SER H 129 LEU H 133 0 SHEET 2 AA4 4 THR H 144 TYR H 154 -1 O GLY H 148 N LEU H 133 SHEET 3 AA4 4 TYR H 185 PRO H 194 -1 O LEU H 187 N VAL H 151 SHEET 4 AA4 4 VAL H 172 THR H 174 -1 N HIS H 173 O VAL H 190 SHEET 1 AA5 4 SER H 129 LEU H 133 0 SHEET 2 AA5 4 THR H 144 TYR H 154 -1 O GLY H 148 N LEU H 133 SHEET 3 AA5 4 TYR H 185 PRO H 194 -1 O LEU H 187 N VAL H 151 SHEET 4 AA5 4 VAL H 178 LEU H 179 -1 N VAL H 178 O SER H 186 SHEET 1 AA6 3 THR H 160 TRP H 163 0 SHEET 2 AA6 3 ILE H 204 HIS H 209 -1 O ASN H 206 N SER H 162 SHEET 3 AA6 3 THR H 214 LYS H 219 -1 O THR H 214 N HIS H 209 SHEET 1 AA7 4 MET L 6 SER L 9 0 SHEET 2 AA7 4 ALA L 21 ALA L 27 -1 O SER L 24 N SER L 9 SHEET 3 AA7 4 ASP L 76 ILE L 81 -1 O LEU L 79 N ILE L 23 SHEET 4 AA7 4 PHE L 68 SER L 73 -1 N SER L 69 O ASN L 80 SHEET 1 AA8 6 SER L 12 VAL L 15 0 SHEET 2 AA8 6 THR L 108 ILE L 112 1 O LYS L 109 N LEU L 13 SHEET 3 AA8 6 ALA L 90 HIS L 96 -1 N ALA L 90 O LEU L 110 SHEET 4 AA8 6 MET L 39 GLN L 44 -1 N GLN L 44 O THR L 91 SHEET 5 AA8 6 LYS L 51 TYR L 55 -1 O LYS L 51 N GLN L 43 SHEET 6 AA8 6 ASN L 59 LEU L 60 -1 O ASN L 59 N TYR L 55 SHEET 1 AA9 2 SER L 32 THR L 33 0 SHEET 2 AA9 2 TYR L 36 ASN L 37 -1 O TYR L 36 N THR L 33 SHEET 1 AB1 4 SER L 120 PHE L 124 0 SHEET 2 AB1 4 THR L 135 PHE L 145 -1 O LEU L 141 N PHE L 122 SHEET 3 AB1 4 TYR L 179 SER L 188 -1 O LEU L 185 N VAL L 138 SHEET 4 AB1 4 SER L 165 VAL L 169 -1 N GLN L 166 O THR L 184 SHEET 1 AB2 4 ALA L 159 LEU L 160 0 SHEET 2 AB2 4 LYS L 151 VAL L 156 -1 N VAL L 156 O ALA L 159 SHEET 3 AB2 4 VAL L 197 THR L 203 -1 O ALA L 199 N LYS L 155 SHEET 4 AB2 4 VAL L 211 ASN L 216 -1 O VAL L 211 N VAL L 202 SHEET 1 AB3 5 GLY C 41 LEU C 42 0 SHEET 2 AB3 5 VAL C 49 ALA C 50 -1 O VAL C 49 N LEU C 42 SHEET 3 AB3 5 VAL C 85 ALA C 94 1 O PHE C 91 N ALA C 50 SHEET 4 AB3 5 ASN C 62 PHE C 75 -1 N LEU C 69 O ARG C 88 SHEET 5 AB3 5 ILE C 146 ASN C 147 1 O ASN C 147 N ASN C 62 SHEET 1 AB4 5 GLY C 41 LEU C 42 0 SHEET 2 AB4 5 VAL C 49 ALA C 50 -1 O VAL C 49 N LEU C 42 SHEET 3 AB4 5 VAL C 85 ALA C 94 1 O PHE C 91 N ALA C 50 SHEET 4 AB4 5 ASN C 62 PHE C 75 -1 N LEU C 69 O ARG C 88 SHEET 5 AB4 5 VAL C 153 LEU C 156 1 O LEU C 156 N ILE C 68 SSBOND 1 CYS H 22 CYS H 96 1555 1555 2.03 SSBOND 2 CYS H 149 CYS H 205 1555 1555 2.03 SSBOND 3 CYS L 25 CYS L 94 1555 1555 2.03 SSBOND 4 CYS L 140 CYS L 200 1555 1555 2.03 LINK ND2 ASN C 74 C1 NAG A 1 1555 1555 1.45 LINK O4 NAG A 1 C1 NAG A 2 1555 1555 1.44 CISPEP 1 PHE H 155 PRO H 156 0 -1.04 CISPEP 2 GLU H 157 PRO H 158 0 -2.65 CISPEP 3 SER L 9 PRO L 10 0 -0.98 CISPEP 4 LEU L 100 PRO L 101 0 -0.84 CISPEP 5 TYR L 146 PRO L 147 0 1.76 CRYST1 196.959 196.959 93.233 90.00 90.00 120.00 P 31 2 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.005077 0.002931 0.000000 0.00000 SCALE2 0.000000 0.005863 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010726 0.00000 TER 1702 CYS H 225 TER 3384 CYS L 220 TER 4614 LEU C 156 HETATM 4615 C1 NAG A 1 42.716-101.202 -47.822 1.00136.86 C HETATM 4616 C2 NAG A 1 42.465-101.661 -49.261 1.00141.42 C HETATM 4617 C3 NAG A 1 41.108-102.359 -49.347 1.00143.18 C HETATM 4618 C4 NAG A 1 40.982-103.477 -48.315 1.00151.98 C HETATM 4619 C5 NAG A 1 41.358-102.930 -46.931 1.00141.29 C HETATM 4620 C6 NAG A 1 41.371-103.958 -45.821 1.00125.60 C HETATM 4621 C7 NAG A 1 43.581-100.296 -50.991 1.00120.90 C HETATM 4622 C8 NAG A 1 43.435 -99.063 -51.850 1.00 89.74 C HETATM 4623 N2 NAG A 1 42.543-100.547 -50.170 1.00141.48 N HETATM 4624 O3 NAG A 1 40.970-102.839 -50.657 1.00144.41 O HETATM 4625 O4 NAG A 1 39.640-103.913 -48.361 1.00160.39 O HETATM 4626 O5 NAG A 1 42.640-102.334 -46.988 1.00134.20 O HETATM 4627 O6 NAG A 1 42.341-104.939 -46.096 1.00109.88 O HETATM 4628 O7 NAG A 1 44.579-100.998 -51.057 1.00120.41 O HETATM 4629 C1 NAG A 2 39.576-105.318 -48.670 1.00156.51 C HETATM 4630 C2 NAG A 2 38.246-105.863 -48.134 1.00153.39 C HETATM 4631 C3 NAG A 2 38.115-107.341 -48.484 1.00156.95 C HETATM 4632 C4 NAG A 2 38.292-107.539 -49.983 1.00157.37 C HETATM 4633 C5 NAG A 2 39.619-106.911 -50.421 1.00158.25 C HETATM 4634 C6 NAG A 2 39.886-107.012 -51.904 1.00140.93 C HETATM 4635 C7 NAG A 2 37.212-104.841 -46.130 1.00144.03 C HETATM 4636 C8 NAG A 2 36.271-104.118 -47.064 1.00112.52 C HETATM 4637 N2 NAG A 2 38.118-105.651 -46.715 1.00154.78 N HETATM 4638 O3 NAG A 2 36.855-107.773 -48.046 1.00168.66 O HETATM 4639 O4 NAG A 2 38.272-108.928 -50.210 1.00129.30 O HETATM 4640 O5 NAG A 2 39.644-105.545 -50.057 1.00160.46 O HETATM 4641 O6 NAG A 2 39.231-105.964 -52.575 1.00107.10 O HETATM 4642 O7 NAG A 2 37.138-104.687 -44.921 1.00144.54 O CONECT 159 745 CONECT 745 159 CONECT 1130 1544 CONECT 1544 1130 CONECT 1863 2404 CONECT 2404 1863 CONECT 2753 3232 CONECT 3232 2753 CONECT 3920 4615 CONECT 4615 3920 4616 4626 CONECT 4616 4615 4617 4623 CONECT 4617 4616 4618 4624 CONECT 4618 4617 4619 4625 CONECT 4619 4618 4620 4626 CONECT 4620 4619 4627 CONECT 4621 4622 4623 4628 CONECT 4622 4621 CONECT 4623 4616 4621 CONECT 4624 4617 CONECT 4625 4618 4629 CONECT 4626 4615 4619 CONECT 4627 4620 CONECT 4628 4621 CONECT 4629 4625 4630 4640 CONECT 4630 4629 4631 4637 CONECT 4631 4630 4632 4638 CONECT 4632 4631 4633 4639 CONECT 4633 4632 4634 4640 CONECT 4634 4633 4641 CONECT 4635 4636 4637 4642 CONECT 4636 4635 CONECT 4637 4630 4635 CONECT 4638 4631 CONECT 4639 4632 CONECT 4640 4629 4633 CONECT 4641 4634 CONECT 4642 4635 MASTER 258 0 2 14 55 0 0 6 4639 3 37 47 END