HEADER VIRUS LIKE PARTICLE 22-APR-24 9BHU TITLE STREPTOMYCES GRISEUS FAMILY 2B ENCAPSULIN SHELL COMPND MOL_ID: 1; COMPND 2 MOLECULE: NUCLEOTIDE-BINDING PROTEIN; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: SPORULATION PROTEIN; COMPND 5 ENGINEERED: YES; COMPND 6 OTHER_DETAILS: RESIDUES 1-39, 147-152, AND 216-245 ARE UNRESOLVED IN COMPND 7 THE MAP. SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STREPTOMYCES GRISEUS SUBSP. GRISEUS; SOURCE 3 ORGANISM_TAXID: 67263; SOURCE 4 ATCC: 23345; SOURCE 5 GENE: MMPI_1, NCTC13033_02226; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS ENCAPSULIN, NANOCOMPARTMENT, VIRUS LIKE PARTICLE EXPDTA ELECTRON MICROSCOPY AUTHOR M.P.ANDREAS,T.W.GIESSEN REVDAT 1 27-NOV-24 9BHU 0 JRNL AUTH M.P.ANDREAS,T.W.GIESSEN JRNL TITL THE BIOSYNTHESIS OF THE ODORANT 2-METHYLISOBORNEOL IS JRNL TITL 2 COMPARTMENTALIZED INSIDE A PROTEIN SHELL. JRNL REF NAT COMMUN V. 15 9715 2024 JRNL REFN ESSN 2041-1723 JRNL PMID 39521781 JRNL DOI 10.1038/S41467-024-54175-4 REMARK 2 REMARK 2 RESOLUTION. 2.71 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 SOFTWARE PACKAGES : CRYOSPARC, LEGINON, CRYOSPARC, UCSF REMARK 3 CHIMERAX, COOT, PHENIX, CRYOSPARC, REMARK 3 CRYOSPARC, CRYOSPARC REMARK 3 RECONSTRUCTION SCHEMA : NULL REMARK 3 REMARK 3 EM MAP-MODEL FITTING AND REFINEMENT REMARK 3 PDB ENTRY : NULL REMARK 3 REFINEMENT SPACE : REAL REMARK 3 REFINEMENT PROTOCOL : FLEXIBLE FIT REMARK 3 REFINEMENT TARGET : CROSS-CORRELATION COEFFICIENT REMARK 3 OVERALL ANISOTROPIC B VALUE : 127.900 REMARK 3 REMARK 3 FITTING PROCEDURE : AN ALPHAFOLD-GENERATED MODEL WAS FIT INTO THE REMARK 3 MAP USING CHIMERAX V1.5. THE MODEL WAS THEN REFINED ITERATIVELY REMARK 3 BY ALTERNATING ROUNDS OF MANUAL REFINEMENT IN COOT V8.9.1 AND REMARK 3 REAL-SPACE REFINEMENTS USING PHENIX V1.20.1-4487. REMARK 3 REMARK 3 EM IMAGE RECONSTRUCTION STATISTICS REMARK 3 NOMINAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 ACTUAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 EFFECTIVE RESOLUTION (ANGSTROMS) : 2.710 REMARK 3 NUMBER OF PARTICLES : 135027 REMARK 3 CTF CORRECTION METHOD : PHASE FLIPPING AND AMPLITUDE REMARK 3 CORRECTION REMARK 3 REMARK 3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: NULL REMARK 3 REMARK 3 OTHER DETAILS: HOMOGENEOUS REFINEMENT WITH I SYMMETRY IMPOSED, PER REMARK 3 -PARTICLE DEFOCUS OPTIMIZATION, PER-GROUP CTF PARAMETERIZATION, REMARK 3 SPHERICAL ABERRATION FIT ENABLED, TETRAFOIL FIT ENABLED, EWALD REMARK 3 SPHERE CORRECTION WITH NEGATIVE CURVATURE, AND MINIMIZE OVER PER- REMARK 3 PARTICLE SCALE ENABLED. REMARK 4 REMARK 4 9BHU COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 29-APR-24. REMARK 100 THE DEPOSITION ID IS D_1000283381. REMARK 245 REMARK 245 EXPERIMENTAL DETAILS REMARK 245 RECONSTRUCTION METHOD : SINGLE PARTICLE REMARK 245 SPECIMEN TYPE : NULL REMARK 245 REMARK 245 ELECTRON MICROSCOPE SAMPLE REMARK 245 SAMPLE TYPE : PARTICLE REMARK 245 PARTICLE TYPE : POINT REMARK 245 NAME OF SAMPLE : STREPTOMYCES GRISEUS FAMILY 2B REMARK 245 ENCAPSULIN SHELL REMARK 245 SAMPLE CONCENTRATION (MG ML-1) : 2.50 REMARK 245 SAMPLE SUPPORT DETAILS : 60 SECONDS AT 5 MA UNDER VACUUM REMARK 245 SAMPLE VITRIFICATION DETAILS : BLOT FORCE: 20 BLOT TIME: 4 REMARK 245 SECONDS REMARK 245 SAMPLE BUFFER : NULL REMARK 245 PH : 7.50 REMARK 245 SAMPLE DETAILS : NULL REMARK 245 REMARK 245 DATA ACQUISITION REMARK 245 DATE OF EXPERIMENT : NULL REMARK 245 NUMBER OF MICROGRAPHS-IMAGES : NULL REMARK 245 TEMPERATURE (KELVIN) : NULL REMARK 245 MICROSCOPE MODEL : TFS GLACIOS REMARK 245 DETECTOR TYPE : GATAN K2 SUMMIT (4K X 4K) REMARK 245 MINIMUM DEFOCUS (NM) : 1000.00 REMARK 245 MAXIMUM DEFOCUS (NM) : 1800.00 REMARK 245 MINIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 MAXIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 NOMINAL CS : NULL REMARK 245 IMAGING MODE : BRIGHT FIELD REMARK 245 ELECTRON DOSE (ELECTRONS NM**-2) : 4322.00 REMARK 245 ILLUMINATION MODE : FLOOD BEAM REMARK 245 NOMINAL MAGNIFICATION : 45000 REMARK 245 CALIBRATED MAGNIFICATION : NULL REMARK 245 SOURCE : FIELD EMISSION GUN REMARK 245 ACCELERATION VOLTAGE (KV) : 200 REMARK 245 IMAGING DETAILS : NULL REMARK 247 REMARK 247 ELECTRON MICROSCOPY REMARK 247 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON REMARK 247 MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE REMARK 247 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES REMARK 247 ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION REMARK 247 OF THE STRUCTURE FACTORS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 THE ASSEMBLY REPRESENTED IN THIS ENTRY HAS REGULAR REMARK 300 ICOSAHEDRAL POINT SYMMETRY (SCHOENFLIES SYMBOL = I). REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.309017 -0.809003 0.500023 200.19033 REMARK 350 BIOMT2 2 0.809003 0.500017 0.309026 -123.73193 REMARK 350 BIOMT3 2 -0.500023 0.309026 0.809000 76.47538 REMARK 350 BIOMT1 3 -0.809017 -0.499991 0.309031 400.39146 REMARK 350 BIOMT2 3 0.499991 -0.308971 0.809040 -0.01264 REMARK 350 BIOMT3 3 -0.309031 0.809040 0.499954 0.00784 REMARK 350 BIOMT1 4 -0.809017 0.499991 -0.309031 323.93224 REMARK 350 BIOMT2 4 -0.499991 -0.308971 0.809040 200.18202 REMARK 350 BIOMT3 4 0.309031 0.809040 0.499954 -123.72707 REMARK 350 BIOMT1 5 0.309017 0.809003 -0.500023 76.47671 REMARK 350 BIOMT2 5 -0.809003 0.500017 0.309026 200.18983 REMARK 350 BIOMT3 5 0.500023 0.309026 0.809000 -123.73192 REMARK 350 BIOMT1 6 -1.000000 0.000000 -0.000024 400.40116 REMARK 350 BIOMT2 6 0.000000 -1.000000 0.000056 400.38644 REMARK 350 BIOMT3 6 -0.000024 0.000056 1.000000 -0.00639 REMARK 350 BIOMT1 7 -0.309005 0.808995 -0.500043 200.20896 REMARK 350 BIOMT2 7 -0.809031 -0.500000 -0.308980 524.12268 REMARK 350 BIOMT3 7 -0.499985 0.309074 0.809005 76.45710 REMARK 350 BIOMT1 8 0.809025 0.499972 -0.309043 0.00970 REMARK 350 BIOMT2 8 -0.500009 0.309017 -0.809012 400.39908 REMARK 350 BIOMT3 8 -0.308983 0.809035 0.499992 -0.00836 REMARK 350 BIOMT1 9 0.809009 -0.500011 0.309019 76.47195 REMARK 350 BIOMT2 9 0.500009 0.309017 -0.809012 200.19744 REMARK 350 BIOMT3 9 0.309023 0.809010 0.500008 -123.73010 REMARK 350 BIOMT1 10 -0.309029 -0.809010 0.500003 323.92748 REMARK 350 BIOMT2 10 0.809031 -0.500000 -0.308980 200.18963 REMARK 350 BIOMT3 10 0.499970 0.309034 0.809029 -123.72889 REMARK 350 BIOMT1 11 -1.000000 0.000039 0.000000 400.38838 REMARK 350 BIOMT2 11 0.000039 1.000000 -0.000056 0.00342 REMARK 350 BIOMT3 11 0.000000 -0.000056 -1.000000 400.41162 REMARK 350 BIOMT1 12 -0.308985 0.809023 -0.500011 200.19318 REMARK 350 BIOMT2 12 0.809043 0.499968 0.309000 -123.72494 REMARK 350 BIOMT3 12 0.499977 -0.309054 -0.809017 323.94323 REMARK 350 BIOMT1 13 0.809037 0.499979 -0.308999 -0.00309 REMARK 350 BIOMT2 13 0.499977 -0.309037 0.809024 0.00654 REMARK 350 BIOMT3 13 0.309003 -0.809022 -0.500000 400.40378 REMARK 350 BIOMT1 14 0.808997 -0.500003 0.309063 76.46401 REMARK 350 BIOMT2 14 -0.500041 -0.308997 0.808999 200.20517 REMARK 350 BIOMT3 14 -0.309003 -0.809022 -0.500000 524.12740 REMARK 350 BIOMT1 15 -0.309049 -0.808983 0.500035 323.91955 REMARK 350 BIOMT2 15 -0.809019 0.500032 0.308960 200.20324 REMARK 350 BIOMT3 15 -0.499977 -0.309054 -0.809017 524.13224 REMARK 350 BIOMT1 16 1.000000 -0.000039 0.000024 0.00298 REMARK 350 BIOMT2 16 -0.000039 -1.000000 0.000000 400.40562 REMARK 350 BIOMT3 16 0.000024 0.000000 -1.000000 400.39542 REMARK 350 BIOMT1 17 0.308973 -0.809015 0.500030 200.20005 REMARK 350 BIOMT2 17 -0.809015 -0.499986 -0.309045 524.12967 REMARK 350 BIOMT3 17 0.500030 -0.309045 -0.808987 323.92495 REMARK 350 BIOMT1 18 -0.809044 -0.499959 0.309011 400.39444 REMARK 350 BIOMT2 18 -0.499959 0.308991 -0.809052 400.40250 REMARK 350 BIOMT3 18 0.309011 -0.809052 -0.499947 400.39739 REMARK 350 BIOMT1 19 -0.808990 0.500023 -0.309051 323.92430 REMARK 350 BIOMT2 19 0.500023 0.308952 -0.809028 200.21085 REMARK 350 BIOMT3 19 -0.309051 -0.809028 -0.499962 524.13043 REMARK 350 BIOMT1 20 0.309061 0.808991 -0.500015 76.46877 REMARK 350 BIOMT2 20 0.808991 -0.500049 -0.309006 200.21278 REMARK 350 BIOMT3 20 -0.500015 -0.309006 -0.809012 524.12921 REMARK 350 BIOMT1 21 0.000007 0.000016 1.000000 -0.00672 REMARK 350 BIOMT2 21 1.000000 0.000009 -0.000007 0.00052 REMARK 350 BIOMT3 21 -0.000009 1.000000 -0.000016 0.00620 REMARK 350 BIOMT1 22 -0.500008 0.309028 0.809008 76.46817 REMARK 350 BIOMT2 22 0.309028 -0.809001 0.500019 200.18922 REMARK 350 BIOMT3 22 0.809008 0.500019 0.309009 -123.72866 REMARK 350 BIOMT1 23 -0.309029 0.809031 0.499970 0.00410 REMARK 350 BIOMT2 23 -0.809010 -0.500000 0.309034 400.39198 REMARK 350 BIOMT3 23 0.500003 -0.308980 0.809029 -0.00985 REMARK 350 BIOMT1 24 0.309017 0.809039 0.499965 -123.72819 REMARK 350 BIOMT2 24 -0.809024 0.499983 -0.309028 323.93539 REMARK 350 BIOMT3 24 -0.499989 -0.308989 0.809034 200.18743 REMARK 350 BIOMT1 25 0.500012 0.309040 0.809001 -123.73487 REMARK 350 BIOMT2 25 0.309006 0.809005 -0.500026 76.47986 REMARK 350 BIOMT3 25 -0.809014 0.500006 0.309017 200.19735 REMARK 350 BIOMT1 26 -0.000032 0.000040 1.000000 -0.00374 REMARK 350 BIOMT2 26 -1.000000 -0.000009 -0.000032 400.40510 REMARK 350 BIOMT3 26 0.000009 -1.000000 0.000040 400.38922 REMARK 350 BIOMT1 27 -0.500000 0.309072 0.808996 76.46023 REMARK 350 BIOMT2 27 -0.309008 0.808989 -0.500051 200.21339 REMARK 350 BIOMT3 27 -0.809020 -0.500012 -0.308989 524.12595 REMARK 350 BIOMT1 28 -0.308985 0.809043 0.499977 -0.00869 REMARK 350 BIOMT2 28 0.809023 0.499968 -0.309054 0.01364 REMARK 350 BIOMT3 28 -0.500011 0.309000 -0.809017 400.40528 REMARK 350 BIOMT1 29 0.309037 0.809011 0.499997 -123.73306 REMARK 350 BIOMT2 29 0.809011 -0.500014 0.309008 76.47510 REMARK 350 BIOMT3 29 0.499997 0.309008 -0.809022 200.20496 REMARK 350 BIOMT1 30 0.499980 0.309020 0.809028 -123.73000 REMARK 350 BIOMT2 30 -0.309026 -0.809017 0.499994 323.93063 REMARK 350 BIOMT3 30 0.809026 -0.499998 -0.308997 200.19504 REMARK 350 BIOMT1 31 -0.000007 -0.000040 -1.000000 400.40788 REMARK 350 BIOMT2 31 -1.000000 0.000048 0.000007 400.38592 REMARK 350 BIOMT3 31 0.000048 1.000000 -0.000040 -0.00019 REMARK 350 BIOMT1 32 0.499988 -0.309040 -0.809016 323.93602 REMARK 350 BIOMT2 32 -0.308982 0.809029 -0.500002 200.19023 REMARK 350 BIOMT3 32 0.809038 0.499966 0.309017 -123.72563 REMARK 350 BIOMT1 33 0.309017 -0.809024 -0.499989 400.39706 REMARK 350 BIOMT2 33 0.809039 0.499983 -0.308989 -0.00554 REMARK 350 BIOMT3 33 0.499965 -0.309028 0.809034 0.00635 REMARK 350 BIOMT1 34 -0.309005 -0.809031 -0.499985 524.12444 REMARK 350 BIOMT2 34 0.808995 -0.500000 0.309074 76.46235 REMARK 350 BIOMT3 34 -0.500043 -0.308980 0.809005 200.20235 REMARK 350 BIOMT1 35 -0.499992 -0.309052 -0.809008 524.13113 REMARK 350 BIOMT2 35 -0.309052 -0.808977 0.500044 323.91788 REMARK 350 BIOMT3 35 -0.809008 0.500044 0.308969 200.19830 REMARK 350 BIOMT1 36 0.000032 -0.000016 -1.000000 400.39510 REMARK 350 BIOMT2 36 1.000000 -0.000048 0.000032 0.00394 REMARK 350 BIOMT3 36 -0.000048 -1.000000 0.000016 400.40542 REMARK 350 BIOMT1 37 0.500020 -0.309059 -0.808989 323.92808 REMARK 350 BIOMT2 37 0.308962 -0.809017 0.500034 200.20264 REMARK 350 BIOMT3 37 -0.809026 -0.499974 -0.309037 524.12898 REMARK 350 BIOMT1 38 0.308997 -0.809051 -0.499957 400.40004 REMARK 350 BIOMT2 38 -0.809051 -0.499951 0.309008 400.39540 REMARK 350 BIOMT3 38 -0.499957 0.309008 -0.809047 400.39888 REMARK 350 BIOMT1 39 -0.309049 -0.809019 -0.499977 524.12931 REMARK 350 BIOMT2 39 -0.808983 0.500032 -0.309054 323.92264 REMARK 350 BIOMT3 39 0.500035 0.308960 -0.809017 200.20592 REMARK 350 BIOMT1 40 -0.500000 -0.309008 -0.809020 524.12626 REMARK 350 BIOMT2 40 0.309072 0.808989 -0.500012 76.46711 REMARK 350 BIOMT3 40 0.808996 -0.500051 -0.308989 200.20996 REMARK 350 BIOMT1 41 0.000007 1.000000 -0.000009 -0.00052 REMARK 350 BIOMT2 41 0.000016 0.000009 1.000000 -0.00620 REMARK 350 BIOMT3 41 1.000000 -0.000007 -0.000016 0.00672 REMARK 350 BIOMT1 42 0.809009 0.500009 0.309023 -123.73161 REMARK 350 BIOMT2 42 -0.500011 0.309017 0.809010 76.47132 REMARK 350 BIOMT3 42 0.309019 -0.809012 0.500008 200.19675 REMARK 350 BIOMT1 43 0.499988 -0.308982 0.809038 -0.01018 REMARK 350 BIOMT2 43 -0.309040 0.809029 0.499966 0.00804 REMARK 350 BIOMT3 43 -0.809016 -0.500002 0.309017 400.39818 REMARK 350 BIOMT1 44 -0.500000 -0.308975 0.809033 200.18496 REMARK 350 BIOMT2 44 0.309014 0.809045 0.499956 -123.72639 REMARK 350 BIOMT3 44 -0.809018 0.499981 -0.309045 323.93945 REMARK 350 BIOMT1 45 -0.809005 0.500021 0.309015 200.19093 REMARK 350 BIOMT2 45 0.500021 0.309043 0.808994 -123.73519 REMARK 350 BIOMT3 45 0.309015 0.808994 -0.500038 76.48392 REMARK 350 BIOMT1 46 -0.000007 -1.000000 0.000048 400.38889 REMARK 350 BIOMT2 46 -0.000040 0.000048 1.000000 -0.00278 REMARK 350 BIOMT3 46 -1.000000 0.000007 -0.000040 400.40490 REMARK 350 BIOMT1 47 -0.809029 -0.499997 -0.308991 524.12300 REMARK 350 BIOMT2 47 -0.499997 0.309082 0.808994 76.45857 REMARK 350 BIOMT3 47 -0.308991 0.808994 -0.500053 200.21056 REMARK 350 BIOMT1 48 -0.500000 0.309014 -0.809018 400.39856 REMARK 350 BIOMT2 48 -0.308975 0.809045 0.499981 -0.01114 REMARK 350 BIOMT3 48 0.809033 0.499956 -0.309045 0.01344 REMARK 350 BIOMT1 49 0.500012 0.309006 -0.809014 200.19854 REMARK 350 BIOMT2 49 0.309040 0.809005 0.500006 -123.73337 REMARK 350 BIOMT3 49 0.809001 -0.500026 0.309017 76.47916 REMARK 350 BIOMT1 50 0.809025 -0.500009 -0.308983 200.19257 REMARK 350 BIOMT2 50 0.499972 0.309017 0.809035 -123.72820 REMARK 350 BIOMT3 50 -0.309043 -0.809012 0.499992 323.93469 REMARK 350 BIOMT1 51 0.000032 1.000000 -0.000048 0.00246 REMARK 350 BIOMT2 51 -0.000016 -0.000048 -1.000000 400.41182 REMARK 350 BIOMT3 51 -1.000000 0.000032 0.000016 400.38870 REMARK 350 BIOMT1 52 0.809037 0.499977 0.309003 -123.72674 REMARK 350 BIOMT2 52 0.499979 -0.309037 -0.809022 323.93917 REMARK 350 BIOMT3 52 -0.308999 0.809024 -0.500000 200.19564 REMARK 350 BIOMT1 53 0.499980 -0.309026 0.809026 0.00260 REMARK 350 BIOMT2 53 0.309020 -0.809017 -0.499998 400.39758 REMARK 350 BIOMT3 53 0.809028 0.499994 -0.308997 -0.00276 REMARK 350 BIOMT1 54 -0.500032 -0.308994 0.809006 200.20074 REMARK 350 BIOMT2 54 -0.308994 -0.809033 -0.499988 524.12413 REMARK 350 BIOMT3 54 0.809006 -0.499988 0.309065 76.46088 REMARK 350 BIOMT1 55 -0.809017 0.500028 0.308971 200.20065 REMARK 350 BIOMT2 55 -0.499989 -0.309063 -0.809006 524.13293 REMARK 350 BIOMT3 55 -0.309035 -0.808982 0.500046 323.91641 REMARK 350 BIOMT1 56 -0.000032 -1.000000 0.000009 400.40168 REMARK 350 BIOMT2 56 0.000040 -0.000009 -1.000000 400.39264 REMARK 350 BIOMT3 56 1.000000 -0.000032 0.000040 0.00033 REMARK 350 BIOMT1 57 -0.809017 -0.499989 -0.309035 524.12787 REMARK 350 BIOMT2 57 0.500028 -0.309063 -0.808982 323.92642 REMARK 350 BIOMT3 57 0.308971 -0.809006 0.500046 200.19770 REMARK 350 BIOMT1 58 -0.499968 0.308994 -0.809045 400.40153 REMARK 350 BIOMT2 58 0.308994 -0.809057 -0.499949 400.40100 REMARK 350 BIOMT3 58 -0.809045 -0.499949 0.309025 400.39179 REMARK 350 BIOMT1 59 0.500020 0.308962 -0.809026 200.20826 REMARK 350 BIOMT2 59 -0.309059 -0.809017 -0.499974 524.13111 REMARK 350 BIOMT3 59 -0.808989 0.500034 -0.309037 323.92117 REMARK 350 BIOMT1 60 0.808997 -0.500041 -0.309003 200.20835 REMARK 350 BIOMT2 60 -0.500003 -0.308997 -0.809022 524.12594 REMARK 350 BIOMT3 60 0.309063 0.808999 -0.500000 76.46563 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 THR A 2 REMARK 465 VAL A 3 REMARK 465 ASP A 4 REMARK 465 SER A 5 REMARK 465 THR A 6 REMARK 465 SER A 7 REMARK 465 GLU A 8 REMARK 465 ALA A 9 REMARK 465 ARG A 10 REMARK 465 LEU A 11 REMARK 465 GLU A 12 REMARK 465 VAL A 13 REMARK 465 PRO A 14 REMARK 465 ARG A 15 REMARK 465 GLN A 16 REMARK 465 SER A 17 REMARK 465 SER A 18 REMARK 465 LEU A 19 REMARK 465 GLY A 20 REMARK 465 THR A 21 REMARK 465 ALA A 22 REMARK 465 ALA A 23 REMARK 465 ALA A 24 REMARK 465 ARG A 25 REMARK 465 ASN A 26 REMARK 465 LEU A 27 REMARK 465 ALA A 28 REMARK 465 SER A 29 REMARK 465 THR A 30 REMARK 465 THR A 31 REMARK 465 LYS A 32 REMARK 465 SER A 33 REMARK 465 ALA A 34 REMARK 465 PRO A 35 REMARK 465 GLN A 36 REMARK 465 MET A 37 REMARK 465 GLN A 38 REMARK 465 GLU A 39 REMARK 465 GLY A 147 REMARK 465 SER A 148 REMARK 465 TYR A 149 REMARK 465 GLY A 150 REMARK 465 ASP A 151 REMARK 465 GLU A 152 REMARK 465 ARG A 216 REMARK 465 SER A 217 REMARK 465 GLU A 218 REMARK 465 GLN A 219 REMARK 465 ARG A 220 REMARK 465 GLN A 221 REMARK 465 ASN A 222 REMARK 465 HIS A 223 REMARK 465 ARG A 224 REMARK 465 GLY A 225 REMARK 465 GLU A 226 REMARK 465 ALA A 227 REMARK 465 GLU A 228 REMARK 465 ILE A 229 REMARK 465 ALA A 230 REMARK 465 MET A 231 REMARK 465 SER A 232 REMARK 465 ALA A 233 REMARK 465 GLY A 234 REMARK 465 HIS A 235 REMARK 465 VAL A 236 REMARK 465 GLY A 237 REMARK 465 GLU A 238 REMARK 465 HIS A 239 REMARK 465 GLU A 240 REMARK 465 LEU A 241 REMARK 465 PRO A 242 REMARK 465 GLY A 243 REMARK 465 ALA A 244 REMARK 465 PHE A 245 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 95 -6.93 -55.89 REMARK 500 ASP A 98 -3.80 71.45 REMARK 500 ASP A 156 -168.46 -163.48 REMARK 500 GLN A 408 109.51 -59.11 REMARK 500 MET A 431 -60.54 -93.29 REMARK 500 ASP A 455 44.50 -89.79 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 501 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 THR A 68 O REMARK 620 2 ASP A 71 OD1 70.9 REMARK 620 3 ARG A 73 O 159.9 97.9 REMARK 620 4 GLU A 89 OE1 76.6 136.1 103.1 REMARK 620 5 GLU A 89 OE2 118.3 167.3 75.7 56.5 REMARK 620 6 GLU A 92 OE1 122.4 66.6 63.9 157.0 100.7 REMARK 620 7 GLU A 92 OE2 97.0 93.0 100.3 120.0 77.7 50.1 REMARK 620 N 1 2 3 4 5 6 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EMD-44553 RELATED DB: EMDB REMARK 900 STREPTOMYCES GRISEUS FAMILY 2B ENCAPSULIN SHELL DBREF 9BHU A 1 470 UNP Q54255 Q54255_STRGR 1 470 SEQRES 1 A 470 MET THR VAL ASP SER THR SER GLU ALA ARG LEU GLU VAL SEQRES 2 A 470 PRO ARG GLN SER SER LEU GLY THR ALA ALA ALA ARG ASN SEQRES 3 A 470 LEU ALA SER THR THR LYS SER ALA PRO GLN MET GLN GLU SEQRES 4 A 470 ILE THR SER ARG TRP LEU LEU ARG MET LEU PRO TRP VAL SEQRES 5 A 470 GLU THR LYS GLY GLY ALA TYR ARG VAL ASN ARG ARG LEU SEQRES 6 A 470 THR PHE THR VAL GLY ASP GLY ARG VAL GLU PHE VAL GLN SEQRES 7 A 470 ASP GLY SER THR VAL ARG VAL ILE PRO GLN GLU LEU GLY SEQRES 8 A 470 GLU LEU ALA LEU LEU ARG ASP PHE ASP ASP ALA GLU VAL SEQRES 9 A 470 LEU SER ALA ILE ALA ASP ARG CYS VAL GLN ARG ASP PHE SEQRES 10 A 470 ARG ALA GLY GLU THR LEU VAL GLU ARG GLY THR ALA ALA SEQRES 11 A 470 ASP GLU LEU HIS LEU ILE ALA HIS GLY ARG ILE GLY GLN SEQRES 12 A 470 ALA SER ALA GLY SER TYR GLY ASP GLU VAL THR LEU ASP SEQRES 13 A 470 VAL LEU ALA ASP GLY ASP ARG PHE GLY GLU HIS ALA LEU SEQRES 14 A 470 LEU ASP GLU ASP ALA ARG TRP SER GLN THR ALA THR ALA SEQRES 15 A 470 GLU THR SER GLY THR LEU LEU THR LEU SER ARG ALA ASP SEQRES 16 A 470 PHE ALA ALA VAL VAL ALA ASN SER PRO ALA LEU ARG SER SEQRES 17 A 470 HIS LEU ALA ALA PHE THR ALA ARG SER GLU GLN ARG GLN SEQRES 18 A 470 ASN HIS ARG GLY GLU ALA GLU ILE ALA MET SER ALA GLY SEQRES 19 A 470 HIS VAL GLY GLU HIS GLU LEU PRO GLY ALA PHE ALA ASP SEQRES 20 A 470 TYR GLU LEU LYS PRO ARG GLU TYR GLU LEU SER VAL ALA SEQRES 21 A 470 GLN THR ILE LEU ARG VAL HIS THR ARG VAL ALA ASP LEU SEQRES 22 A 470 TYR ASN GLY PRO MET ASN GLN THR GLU GLU GLN LEU ARG SEQRES 23 A 470 LEU THR ILE GLU ALA LEU ARG GLU ARG GLN GLU HIS GLU SEQRES 24 A 470 LEU ILE ASN ASN ARG GLU PHE GLY LEU LEU HIS ASN ALA SEQRES 25 A 470 ASP PHE LYS GLN ARG ILE GLN THR HIS SER GLY PRO PRO SEQRES 26 A 470 THR PRO ASP ASP LEU ASP GLU LEU LEU CYS ARG ARG ARG SEQRES 27 A 470 GLY THR LYS PHE PHE LEU ALA HIS PRO ARG THR ILE ALA SEQRES 28 A 470 ALA MET GLY ARG GLU PHE ASN ALA ARG GLY LEU TYR PRO SEQRES 29 A 470 ASP HIS THR ASP LEU GLY GLY GLN GLN VAL PRO ALA TRP SEQRES 30 A 470 ARG GLY VAL PRO ILE LEU PRO CYS GLY LYS ILE PRO ILE SEQRES 31 A 470 THR PRO GLU ARG THR SER SER ILE LEU ALA LEU ARG THR SEQRES 32 A 470 GLY GLU GLU ASP GLN GLY VAL ILE GLY LEU ARG GLN THR SEQRES 33 A 470 GLY LEU PRO ASP GLU TYR GLU PRO GLY LEU SER VAL ARG SEQRES 34 A 470 PHE MET ASN ILE ASP GLU LYS ALA ILE ILE SER TYR LEU SEQRES 35 A 470 VAL SER THR TYR TYR SER ALA ALA ILE LEU VAL PRO ASP SEQRES 36 A 470 ALA VAL GLY VAL LEU GLU ASN VAL GLN ILE ALA ASN TRP SEQRES 37 A 470 PRO ARG HET CA A 501 1 HETNAM CA CALCIUM ION FORMUL 2 CA CA 2+ HELIX 1 AA1 ARG A 43 LEU A 49 1 7 HELIX 2 AA2 PRO A 87 ARG A 97 5 11 HELIX 3 AA3 ASP A 101 ARG A 111 1 11 HELIX 4 AA4 GLU A 166 LEU A 170 5 5 HELIX 5 AA5 ARG A 193 SER A 203 1 11 HELIX 6 AA6 SER A 203 ALA A 215 1 13 HELIX 7 AA7 THR A 268 LEU A 273 1 6 HELIX 8 AA8 ASN A 279 ASN A 303 1 25 HELIX 9 AA9 THR A 326 ARG A 336 1 11 HELIX 10 AB1 HIS A 346 GLY A 361 1 16 HELIX 11 AB2 VAL A 453 ASP A 455 5 3 SHEET 1 AA1 4 TRP A 51 VAL A 52 0 SHEET 2 AA1 4 VAL A 410 ARG A 414 1 O ARG A 414 N VAL A 52 SHEET 3 AA1 4 ILE A 438 ILE A 451 -1 O ALA A 450 N ILE A 411 SHEET 4 AA1 4 SER A 258 HIS A 267 -1 N ALA A 260 O THR A 445 SHEET 1 AA2 4 TRP A 51 VAL A 52 0 SHEET 2 AA2 4 VAL A 410 ARG A 414 1 O ARG A 414 N VAL A 52 SHEET 3 AA2 4 ILE A 438 ILE A 451 -1 O ALA A 450 N ILE A 411 SHEET 4 AA2 4 LEU A 426 ILE A 433 -1 N MET A 431 O SER A 440 SHEET 1 AA3 2 ALA A 58 VAL A 61 0 SHEET 2 AA3 2 ARG A 253 GLU A 256 -1 O ARG A 253 N VAL A 61 SHEET 1 AA4 2 PHE A 76 ASP A 79 0 SHEET 2 AA4 2 THR A 82 VAL A 85 -1 O ARG A 84 N VAL A 77 SHEET 1 AA5 4 VAL A 113 PHE A 117 0 SHEET 2 AA5 4 GLY A 186 SER A 192 -1 O LEU A 188 N ARG A 115 SHEET 3 AA5 4 GLU A 132 ILE A 136 -1 N LEU A 135 O LEU A 189 SHEET 4 AA5 4 ARG A 163 PHE A 164 -1 O PHE A 164 N HIS A 134 SHEET 1 AA6 4 THR A 122 VAL A 124 0 SHEET 2 AA6 4 THR A 179 ALA A 182 -1 O ALA A 180 N LEU A 123 SHEET 3 AA6 4 ILE A 141 ALA A 144 -1 N GLY A 142 O THR A 181 SHEET 4 AA6 4 THR A 154 LEU A 158 -1 O LEU A 158 N ILE A 141 SHEET 1 AA7 7 ARG A 317 GLN A 319 0 SHEET 2 AA7 7 VAL A 457 GLN A 464 1 O VAL A 459 N ILE A 318 SHEET 3 AA7 7 THR A 395 LEU A 401 -1 N SER A 396 O VAL A 463 SHEET 4 AA7 7 PHE A 342 ALA A 345 -1 N PHE A 342 O LEU A 401 SHEET 5 AA7 7 VAL A 380 PRO A 384 1 O LEU A 383 N PHE A 343 SHEET 6 AA7 7 GLN A 372 TRP A 377 -1 N PRO A 375 O ILE A 382 SHEET 7 AA7 7 HIS A 366 LEU A 369 -1 N LEU A 369 O GLN A 372 LINK O THR A 68 CA CA A 501 1555 1555 2.19 LINK OD1 ASP A 71 CA CA A 501 1555 1555 2.55 LINK O ARG A 73 CA CA A 501 1555 1555 2.47 LINK OE1 GLU A 89 CA CA A 501 1555 1555 2.39 LINK OE2 GLU A 89 CA CA A 501 1555 1555 2.24 LINK OE1 GLU A 92 CA CA A 501 1555 1555 2.59 LINK OE2 GLU A 92 CA CA A 501 1555 1555 2.58 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 TER 3100 ARG A 470 HETATM 3101 CA CA A 501 212.049 222.134 320.210 1.00 30.00 CA CONECT 245 3101 CONECT 266 3101 CONECT 275 3101 CONECT 407 3101 CONECT 408 3101 CONECT 428 3101 CONECT 429 3101 CONECT 3101 245 266 275 407 CONECT 3101 408 428 429 MASTER 407 0 1 11 27 0 0 6 3100 1 9 37 END