data_9BIC # _entry.id 9BIC # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.396 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 9BIC pdb_00009bic 10.2210/pdb9bic/pdb WWPDB D_1000283437 ? ? # _pdbx_audit_revision_history.ordinal 1 _pdbx_audit_revision_history.data_content_type 'Structure model' _pdbx_audit_revision_history.major_revision 1 _pdbx_audit_revision_history.minor_revision 0 _pdbx_audit_revision_history.revision_date 2024-09-18 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 9BIC _pdbx_database_status.recvd_initial_deposition_date 2024-04-23 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # _pdbx_contact_author.id 4 _pdbx_contact_author.email jsnowick@uci.edu _pdbx_contact_author.name_first James _pdbx_contact_author.name_last Nowick _pdbx_contact_author.name_mi ? _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0002-2273-1029 # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Kreutzer, A.G.' 1 0000-0002-9724-6298 'Griffin, J.G.' 2 ? 'Nowick, J.S.' 3 0000-0002-2273-1029 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev J.Org.Chem. _citation.journal_id_ASTM JOCEAH _citation.journal_id_CSD 0035 _citation.journal_id_ISSN 0022-3263 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 89 _citation.language ? _citation.page_first 12479 _citation.page_last 12484 _citation.title 'Structure-Activity Relationship Studies of the Peptide Antibiotic Clovibactin.' _citation.year 2024 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1021/acs.joc.4c01414 _citation.pdbx_database_id_PubMed 39178334 _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Brunicardi, J.E.H.' 1 0000-0002-3661-9476 primary 'Griffin, J.H.' 2 0009-0004-9448-1526 primary 'Ferracane, M.J.' 3 ? primary 'Kreutzer, A.G.' 4 0000-0002-9724-6298 primary 'Small, J.' 5 ? primary 'Mendoza, A.T.' 6 0009-0000-3799-1897 primary 'Ziller, J.W.' 7 0000-0001-7404-950X primary 'Nowick, J.S.' 8 0000-0002-2273-1029 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn PHE-MLU-DLY-SER-DTH-ALA-LEU-LEU 906.121 8 ? ? ? ? 2 non-polymer syn 'CADMIUM ION' 112.411 4 ? ? ? ? 3 non-polymer syn 'SULFATE ION' 96.063 3 ? ? ? ? 4 water nat water 18.015 79 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code 'F(MLU)(DLY)S(DTH)ALL' _entity_poly.pdbx_seq_one_letter_code_can FXKSTALL _entity_poly.pdbx_strand_id A,B,C,D,E,F,G,H _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'CADMIUM ION' CD 3 'SULFATE ION' SO4 4 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 PHE n 1 2 MLU n 1 3 DLY n 1 4 SER n 1 5 DTH n 1 6 ALA n 1 7 LEU n 1 8 LEU n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 8 _pdbx_entity_src_syn.organism_scientific Eleftheria _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 1597779 _pdbx_entity_src_syn.details ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 CD non-polymer . 'CADMIUM ION' ? 'Cd 2' 112.411 DLY 'D-peptide linking' . D-LYSINE ? 'C6 H14 N2 O2' 146.188 DTH 'D-peptide linking' . D-THREONINE ? 'C4 H9 N O3' 119.119 HOH non-polymer . WATER ? 'H2 O' 18.015 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 MLU 'D-peptide linking' . N-methyl-D-leucine ? 'C7 H15 N O2' 145.199 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 PHE 1 1 1 PHE PHE A . n A 1 2 MLU 2 2 2 MLU MLU A . n A 1 3 DLY 3 3 3 DLY DLY A . n A 1 4 SER 4 4 4 SER SER A . n A 1 5 DTH 5 5 5 DTH DTH A . n A 1 6 ALA 6 6 6 ALA ALA A . n A 1 7 LEU 7 7 7 LEU LEU A . n A 1 8 LEU 8 8 8 LEU LEU A . n B 1 1 PHE 1 1 1 PHE PHE B . n B 1 2 MLU 2 2 2 MLU MLU B . n B 1 3 DLY 3 3 3 DLY DLY B . n B 1 4 SER 4 4 4 SER SER B . n B 1 5 DTH 5 5 5 DTH DTH B . n B 1 6 ALA 6 6 6 ALA ALA B . n B 1 7 LEU 7 7 7 LEU LEU B . n B 1 8 LEU 8 8 8 LEU LEU B . n C 1 1 PHE 1 1 1 PHE PHE C . n C 1 2 MLU 2 2 2 MLU MLU C . n C 1 3 DLY 3 3 3 DLY DLY C . n C 1 4 SER 4 4 4 SER SER C . n C 1 5 DTH 5 5 5 DTH DTH C . n C 1 6 ALA 6 6 6 ALA ALA C . n C 1 7 LEU 7 7 7 LEU LEU C . n C 1 8 LEU 8 8 8 LEU LEU C . n D 1 1 PHE 1 1 1 PHE PHE D . n D 1 2 MLU 2 2 2 MLU MLU D . n D 1 3 DLY 3 3 3 DLY DLY D . n D 1 4 SER 4 4 4 SER SER D . n D 1 5 DTH 5 5 5 DTH DTH D . n D 1 6 ALA 6 6 6 ALA ALA D . n D 1 7 LEU 7 7 7 LEU LEU D . n D 1 8 LEU 8 8 8 LEU LEU D . n E 1 1 PHE 1 1 1 PHE PHE E . n E 1 2 MLU 2 2 2 MLU MLU E . n E 1 3 DLY 3 3 3 DLY DLY E . n E 1 4 SER 4 4 4 SER SER E . n E 1 5 DTH 5 5 5 DTH DTH E . n E 1 6 ALA 6 6 6 ALA ALA E . n E 1 7 LEU 7 7 7 LEU LEU E . n E 1 8 LEU 8 8 8 LEU LEU E . n F 1 1 PHE 1 1 1 PHE PHE F . n F 1 2 MLU 2 2 2 MLU MLU F . n F 1 3 DLY 3 3 3 DLY DLY F . n F 1 4 SER 4 4 4 SER SER F . n F 1 5 DTH 5 5 5 DTH DTH F . n F 1 6 ALA 6 6 6 ALA ALA F . n F 1 7 LEU 7 7 7 LEU LEU F . n F 1 8 LEU 8 8 8 LEU LEU F . n G 1 1 PHE 1 1 1 PHE PHE G . n G 1 2 MLU 2 2 2 MLU MLU G . n G 1 3 DLY 3 3 3 DLY DLY G . n G 1 4 SER 4 4 4 SER SER G . n G 1 5 DTH 5 5 5 DTH DTH G . n G 1 6 ALA 6 6 6 ALA ALA G . n G 1 7 LEU 7 7 7 LEU LEU G . n G 1 8 LEU 8 8 8 LEU LEU G . n H 1 1 PHE 1 1 1 PHE PHE H . n H 1 2 MLU 2 2 2 MLU MLU H . n H 1 3 DLY 3 3 3 DLY DLY H . n H 1 4 SER 4 4 4 SER SER H . n H 1 5 DTH 5 5 5 DTH DTH H . n H 1 6 ALA 6 6 6 ALA ALA H . n H 1 7 LEU 7 7 7 LEU LEU H . n H 1 8 LEU 8 8 8 LEU LEU H . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code I 2 CD 1 101 3 CD CD A . J 2 CD 1 101 4 CD CD B . K 3 SO4 1 101 3 SO4 SO4 C . L 2 CD 1 102 1 CD CD C . M 2 CD 1 101 2 CD CD E . N 3 SO4 1 101 2 SO4 SO4 F . O 3 SO4 1 101 1 SO4 SO4 H . P 4 HOH 1 201 23 HOH HOH A . P 4 HOH 2 202 123 HOH HOH A . P 4 HOH 3 203 1 HOH HOH A . P 4 HOH 4 204 156 HOH HOH A . P 4 HOH 5 205 4 HOH HOH A . P 4 HOH 6 206 5 HOH HOH A . P 4 HOH 7 207 124 HOH HOH A . P 4 HOH 8 208 190 HOH HOH A . P 4 HOH 9 209 30 HOH HOH A . P 4 HOH 10 210 14 HOH HOH A . P 4 HOH 11 211 18 HOH HOH A . Q 4 HOH 1 201 40 HOH HOH B . Q 4 HOH 2 202 54 HOH HOH B . Q 4 HOH 3 203 38 HOH HOH B . Q 4 HOH 4 204 45 HOH HOH B . Q 4 HOH 5 205 27 HOH HOH B . Q 4 HOH 6 206 34 HOH HOH B . Q 4 HOH 7 207 43 HOH HOH B . Q 4 HOH 8 208 164 HOH HOH B . Q 4 HOH 9 209 36 HOH HOH B . Q 4 HOH 10 210 52 HOH HOH B . Q 4 HOH 11 211 139 HOH HOH B . Q 4 HOH 12 212 35 HOH HOH B . Q 4 HOH 13 213 37 HOH HOH B . Q 4 HOH 14 214 29 HOH HOH B . Q 4 HOH 15 215 133 HOH HOH B . Q 4 HOH 16 216 60 HOH HOH B . R 4 HOH 1 201 10 HOH HOH C . R 4 HOH 2 202 58 HOH HOH C . R 4 HOH 3 203 11 HOH HOH C . R 4 HOH 4 204 122 HOH HOH C . R 4 HOH 5 205 110 HOH HOH C . R 4 HOH 6 206 22 HOH HOH C . R 4 HOH 7 207 26 HOH HOH C . R 4 HOH 8 208 8 HOH HOH C . R 4 HOH 9 209 103 HOH HOH C . R 4 HOH 10 210 111 HOH HOH C . S 4 HOH 1 101 39 HOH HOH D . S 4 HOH 2 102 41 HOH HOH D . S 4 HOH 3 103 44 HOH HOH D . S 4 HOH 4 104 3 HOH HOH D . S 4 HOH 5 105 42 HOH HOH D . S 4 HOH 6 106 101 HOH HOH D . S 4 HOH 7 107 55 HOH HOH D . S 4 HOH 8 108 53 HOH HOH D . S 4 HOH 9 109 80 HOH HOH D . S 4 HOH 10 110 2 HOH HOH D . T 4 HOH 1 201 165 HOH HOH E . T 4 HOH 2 202 6 HOH HOH E . U 4 HOH 1 201 56 HOH HOH F . U 4 HOH 2 202 13 HOH HOH F . U 4 HOH 3 203 48 HOH HOH F . U 4 HOH 4 204 16 HOH HOH F . U 4 HOH 5 205 77 HOH HOH F . U 4 HOH 6 206 179 HOH HOH F . U 4 HOH 7 207 82 HOH HOH F . U 4 HOH 8 208 194 HOH HOH F . U 4 HOH 9 209 51 HOH HOH F . V 4 HOH 1 101 95 HOH HOH G . V 4 HOH 2 102 31 HOH HOH G . V 4 HOH 3 103 163 HOH HOH G . V 4 HOH 4 104 15 HOH HOH G . V 4 HOH 5 105 33 HOH HOH G . V 4 HOH 6 106 24 HOH HOH G . V 4 HOH 7 107 32 HOH HOH G . V 4 HOH 8 108 204 HOH HOH G . V 4 HOH 9 109 173 HOH HOH G . W 4 HOH 1 201 19 HOH HOH H . W 4 HOH 2 202 9 HOH HOH H . W 4 HOH 3 203 72 HOH HOH H . W 4 HOH 4 204 47 HOH HOH H . W 4 HOH 5 205 104 HOH HOH H . W 4 HOH 6 206 25 HOH HOH H . W 4 HOH 7 207 171 HOH HOH H . W 4 HOH 8 208 64 HOH HOH H . W 4 HOH 9 209 21 HOH HOH H . W 4 HOH 10 210 70 HOH HOH H . W 4 HOH 11 211 169 HOH HOH H . W 4 HOH 12 212 130 HOH HOH H . # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.21_5207 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? Aimless ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 4 # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 9BIC _cell.details ? _cell.formula_units_Z ? _cell.length_a 23.504 _cell.length_a_esd ? _cell.length_b 47.773 _cell.length_b_esd ? _cell.length_c 54.078 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 32 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 9BIC _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 2 21 21' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 9BIC _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.09 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 41.27 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? _exptl_crystal.pdbx_mosaic_method ? _exptl_crystal.pdbx_mosaic_block_size ? _exptl_crystal.pdbx_mosaic_block_size_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '0.05 M cadmium sulfate hydrate and 1.0 M sodium acetate trihydrate buffered to pH 7.5 with 0.1 M HEPES' _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.temp 296.15 # _diffrn.ambient_environment ? _diffrn.ambient_temp 123.15 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'RIGAKU HyPix-6000HE' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2022-10-03 _diffrn_detector.pdbx_frequency ? _diffrn_detector.id ? _diffrn_detector.number_of_axes ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.54 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source 'ROTATING ANODE' _diffrn_source.target ? _diffrn_source.type 'RIGAKU MICROMAX-007 HF' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 1.54 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_synchrotron_site ? # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 9BIC _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.05 _reflns.d_resolution_low 27.04 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 7382 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 100 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 24.5 _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 21.19 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.846 _reflns.pdbx_CC_star ? _reflns.pdbx_R_split ? _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_CC_split_method ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_1 ? _reflns.pdbx_aniso_diffraction_limit_2 ? _reflns.pdbx_aniso_diffraction_limit_3 ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvalue_1 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_2 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_3 ? _reflns.pdbx_orthogonalization_convention ? _reflns.pdbx_percent_possible_ellipsoidal ? _reflns.pdbx_percent_possible_spherical ? _reflns.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns.pdbx_percent_possible_spherical_anomalous ? _reflns.pdbx_redundancy_anomalous ? _reflns.pdbx_CC_half_anomalous ? _reflns.pdbx_absDiff_over_sigma_anomalous ? _reflns.pdbx_percent_possible_anomalous ? _reflns.pdbx_observed_signal_threshold ? _reflns.pdbx_signal_type ? _reflns.pdbx_signal_details ? _reflns.pdbx_signal_software_id ? # _reflns_shell.d_res_high 2.05 _reflns_shell.d_res_low 2.21 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 866 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half 0.94 _reflns_shell.pdbx_CC_star ? _reflns_shell.pdbx_R_split ? _reflns_shell.percent_possible_all ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_percent_possible_ellipsoidal ? _reflns_shell.pdbx_percent_possible_spherical ? _reflns_shell.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns_shell.pdbx_percent_possible_spherical_anomalous ? _reflns_shell.pdbx_redundancy_anomalous ? _reflns_shell.pdbx_CC_half_anomalous ? _reflns_shell.pdbx_absDiff_over_sigma_anomalous ? _reflns_shell.pdbx_percent_possible_anomalous ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean ? _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 9BIC _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.05 _refine.ls_d_res_low 27.04 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 7382 _refine.ls_number_reflns_R_free 735 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 100.00 _refine.ls_percent_reflns_R_free 9.96 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1598 _refine.ls_R_factor_R_free 0.2038 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.1550 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.51 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.10 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 17.68 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.18 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 504 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 19 _refine_hist.number_atoms_solvent 79 _refine_hist.number_atoms_total 602 _refine_hist.d_res_high 2.05 _refine_hist.d_res_low 27.04 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.004 ? ? ? f_bond_d ? ? 'X-RAY DIFFRACTION' ? 1.348 ? ? ? f_angle_d ? ? 'X-RAY DIFFRACTION' ? 21.520 ? 152 ? f_dihedral_angle_d ? ? 'X-RAY DIFFRACTION' ? 0.054 ? 88 ? f_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.005 ? 72 ? f_plane_restr ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_R_complete _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free _refine_ls_shell.R_factor_R_free 'X-RAY DIFFRACTION' 2.05 2.21 . . 140 1316 100.00 . . . . 0.1519 . . . . . . . . . . . 0.2247 'X-RAY DIFFRACTION' 2.21 2.43 . . 145 1329 100.00 . . . . 0.1531 . . . . . . . . . . . 0.2010 'X-RAY DIFFRACTION' 2.43 2.78 . . 148 1341 100.00 . . . . 0.1589 . . . . . . . . . . . 0.2417 'X-RAY DIFFRACTION' 2.78 3.50 . . 152 1324 100.00 . . . . 0.1584 . . . . . . . . . . . 0.1918 'X-RAY DIFFRACTION' 3.50 27.04 . . 150 1337 100.00 . . . . 0.1525 . . . . . . . . . . . 0.1870 # _struct.entry_id 9BIC _struct.title N-Me-D-Leu2,D-Thr5-clovibactin _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 9BIC _struct_keywords.text 'depsipeptide, ANTIBIOTIC' _struct_keywords.pdbx_keywords ANTIBIOTIC # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 1 ? D N N 1 ? E N N 1 ? F N N 1 ? G N N 1 ? H N N 1 ? I N N 2 ? J N N 2 ? K N N 3 ? L N N 2 ? M N N 2 ? N N N 3 ? O N N 3 ? P N N 4 ? Q N N 4 ? R N N 4 ? S N N 4 ? T N N 4 ? U N N 4 ? V N N 4 ? W N N 4 ? # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 9BIC _struct_ref.pdbx_db_accession 9BIC _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 9BIC A 1 ? 8 ? 9BIC 1 ? 8 ? 1 8 2 1 9BIC B 1 ? 8 ? 9BIC 1 ? 8 ? 1 8 3 1 9BIC C 1 ? 8 ? 9BIC 1 ? 8 ? 1 8 4 1 9BIC D 1 ? 8 ? 9BIC 1 ? 8 ? 1 8 5 1 9BIC E 1 ? 8 ? 9BIC 1 ? 8 ? 1 8 6 1 9BIC F 1 ? 8 ? 9BIC 1 ? 8 ? 1 8 7 1 9BIC G 1 ? 8 ? 9BIC 1 ? 8 ? 1 8 8 1 9BIC H 1 ? 8 ? 9BIC 1 ? 8 ? 1 8 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details hexadecameric _pdbx_struct_assembly.oligomeric_count 16 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 8650 ? 1 MORE -204 ? 1 'SSA (A^2)' 10620 ? # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1,2 C,E,F,H,K,L,M,N,O,R,T,U,W 1 3,4 A,B,D,G,I,J,P,Q,S,V # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 2_575 x,-y+2,-z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 95.5460000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 3 'crystal symmetry operation' 3_744 -x+2,y-1/2,-z-1/2 -1.0000000000 0.0000000000 0.0000000000 47.0080000000 0.0000000000 1.0000000000 0.0000000000 -23.8865000000 0.0000000000 0.0000000000 -1.0000000000 -27.0390000000 4 'crystal symmetry operation' 4_775 -x+2,-y+5/2,z+1/2 -1.0000000000 0.0000000000 0.0000000000 47.0080000000 0.0000000000 -1.0000000000 0.0000000000 119.4325000000 0.0000000000 0.0000000000 1.0000000000 27.0390000000 # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A PHE 1 C ? ? ? 1_555 A MLU 2 N ? ? A PHE 1 A MLU 2 1_555 ? ? ? ? ? ? ? 1.336 ? ? covale2 covale both ? A MLU 2 C ? ? ? 1_555 A DLY 3 N ? ? A MLU 2 A DLY 3 1_555 ? ? ? ? ? ? ? 1.330 ? ? covale3 covale both ? A DLY 3 C ? ? ? 1_555 A SER 4 N ? ? A DLY 3 A SER 4 1_555 ? ? ? ? ? ? ? 1.332 ? ? covale4 covale both ? A SER 4 C ? ? ? 1_555 A DTH 5 N ? ? A SER 4 A DTH 5 1_555 ? ? ? ? ? ? ? 1.329 ? ? covale5 covale both ? A DTH 5 C ? ? ? 1_555 A ALA 6 N ? ? A DTH 5 A ALA 6 1_555 ? ? ? ? ? ? ? 1.333 ? ? covale6 covale one ? A DTH 5 OG1 ? ? ? 1_555 A LEU 8 C ? ? A DTH 5 A LEU 8 1_555 ? ? ? ? ? ? ? 1.325 ? ? covale7 covale both ? B PHE 1 C ? ? ? 1_555 B MLU 2 N ? ? B PHE 1 B MLU 2 1_555 ? ? ? ? ? ? ? 1.333 ? ? covale8 covale both ? B MLU 2 C ? ? ? 1_555 B DLY 3 N ? ? B MLU 2 B DLY 3 1_555 ? ? ? ? ? ? ? 1.326 ? ? covale9 covale both ? B DLY 3 C ? ? ? 1_555 B SER 4 N ? ? B DLY 3 B SER 4 1_555 ? ? ? ? ? ? ? 1.325 ? ? covale10 covale both ? B SER 4 C ? ? ? 1_555 B DTH 5 N ? ? B SER 4 B DTH 5 1_555 ? ? ? ? ? ? ? 1.330 ? ? covale11 covale both ? B DTH 5 C ? ? ? 1_555 B ALA 6 N ? ? B DTH 5 B ALA 6 1_555 ? ? ? ? ? ? ? 1.331 ? ? covale12 covale one ? B DTH 5 OG1 ? ? ? 1_555 B LEU 8 C ? ? B DTH 5 B LEU 8 1_555 ? ? ? ? ? ? ? 1.328 ? ? covale13 covale both ? C PHE 1 C ? ? ? 1_555 C MLU 2 N ? ? C PHE 1 C MLU 2 1_555 ? ? ? ? ? ? ? 1.333 ? ? covale14 covale both ? C MLU 2 C ? ? ? 1_555 C DLY 3 N ? ? C MLU 2 C DLY 3 1_555 ? ? ? ? ? ? ? 1.329 ? ? covale15 covale both ? C DLY 3 C ? ? ? 1_555 C SER 4 N ? ? C DLY 3 C SER 4 1_555 ? ? ? ? ? ? ? 1.329 ? ? covale16 covale both ? C SER 4 C ? ? ? 1_555 C DTH 5 N ? ? C SER 4 C DTH 5 1_555 ? ? ? ? ? ? ? 1.329 ? ? covale17 covale both ? C DTH 5 C ? ? ? 1_555 C ALA 6 N ? ? C DTH 5 C ALA 6 1_555 ? ? ? ? ? ? ? 1.327 ? ? covale18 covale one ? C DTH 5 OG1 ? ? ? 1_555 C LEU 8 C ? ? C DTH 5 C LEU 8 1_555 ? ? ? ? ? ? ? 1.325 ? ? covale19 covale both ? D PHE 1 C ? ? ? 1_555 D MLU 2 N ? ? D PHE 1 D MLU 2 1_555 ? ? ? ? ? ? ? 1.330 ? ? covale20 covale both ? D MLU 2 C ? ? ? 1_555 D DLY 3 N ? ? D MLU 2 D DLY 3 1_555 ? ? ? ? ? ? ? 1.329 ? ? covale21 covale both ? D DLY 3 C ? ? ? 1_555 D SER 4 N ? ? D DLY 3 D SER 4 1_555 ? ? ? ? ? ? ? 1.328 ? ? covale22 covale both ? D SER 4 C ? ? ? 1_555 D DTH 5 N ? ? D SER 4 D DTH 5 1_555 ? ? ? ? ? ? ? 1.333 ? ? covale23 covale both ? D DTH 5 C ? ? ? 1_555 D ALA 6 N ? ? D DTH 5 D ALA 6 1_555 ? ? ? ? ? ? ? 1.332 ? ? covale24 covale one ? D DTH 5 OG1 ? ? ? 1_555 D LEU 8 C ? ? D DTH 5 D LEU 8 1_555 ? ? ? ? ? ? ? 1.324 ? ? covale25 covale both ? E PHE 1 C ? ? ? 1_555 E MLU 2 N ? ? E PHE 1 E MLU 2 1_555 ? ? ? ? ? ? ? 1.332 ? ? covale26 covale both ? E MLU 2 C ? ? ? 1_555 E DLY 3 N ? ? E MLU 2 E DLY 3 1_555 ? ? ? ? ? ? ? 1.329 ? ? covale27 covale both ? E DLY 3 C ? ? ? 1_555 E SER 4 N ? ? E DLY 3 E SER 4 1_555 ? ? ? ? ? ? ? 1.328 ? ? covale28 covale both ? E SER 4 C ? ? ? 1_555 E DTH 5 N ? ? E SER 4 E DTH 5 1_555 ? ? ? ? ? ? ? 1.331 ? ? covale29 covale both ? E DTH 5 C ? ? ? 1_555 E ALA 6 N ? ? E DTH 5 E ALA 6 1_555 ? ? ? ? ? ? ? 1.331 ? ? covale30 covale one ? E DTH 5 OG1 ? ? ? 1_555 E LEU 8 C ? ? E DTH 5 E LEU 8 1_555 ? ? ? ? ? ? ? 1.325 ? ? covale31 covale both ? F PHE 1 C ? ? ? 1_555 F MLU 2 N ? ? F PHE 1 F MLU 2 1_555 ? ? ? ? ? ? ? 1.335 ? ? covale32 covale both ? F MLU 2 C ? ? ? 1_555 F DLY 3 N ? ? F MLU 2 F DLY 3 1_555 ? ? ? ? ? ? ? 1.325 ? ? covale33 covale both ? F DLY 3 C ? ? ? 1_555 F SER 4 N ? ? F DLY 3 F SER 4 1_555 ? ? ? ? ? ? ? 1.327 ? ? covale34 covale both ? F SER 4 C ? ? ? 1_555 F DTH 5 N ? ? F SER 4 F DTH 5 1_555 ? ? ? ? ? ? ? 1.330 ? ? covale35 covale both ? F DTH 5 C ? ? ? 1_555 F ALA 6 N ? ? F DTH 5 F ALA 6 1_555 ? ? ? ? ? ? ? 1.333 ? ? covale36 covale one ? F DTH 5 OG1 ? ? ? 1_555 F LEU 8 C ? ? F DTH 5 F LEU 8 1_555 ? ? ? ? ? ? ? 1.324 ? ? covale37 covale both ? G PHE 1 C ? ? ? 1_555 G MLU 2 N ? ? G PHE 1 G MLU 2 1_555 ? ? ? ? ? ? ? 1.334 ? ? covale38 covale both ? G MLU 2 C ? ? ? 1_555 G DLY 3 N ? ? G MLU 2 G DLY 3 1_555 ? ? ? ? ? ? ? 1.328 ? ? covale39 covale both ? G DLY 3 C ? ? ? 1_555 G SER 4 N ? ? G DLY 3 G SER 4 1_555 ? ? ? ? ? ? ? 1.327 ? ? covale40 covale both ? G SER 4 C ? ? ? 1_555 G DTH 5 N ? ? G SER 4 G DTH 5 1_555 ? ? ? ? ? ? ? 1.329 ? ? covale41 covale both ? G DTH 5 C ? ? ? 1_555 G ALA 6 N ? ? G DTH 5 G ALA 6 1_555 ? ? ? ? ? ? ? 1.333 ? ? covale42 covale one ? G DTH 5 OG1 ? ? ? 1_555 G LEU 8 C ? ? G DTH 5 G LEU 8 1_555 ? ? ? ? ? ? ? 1.327 ? ? covale43 covale both ? H PHE 1 C ? ? ? 1_555 H MLU 2 N ? ? H PHE 1 H MLU 2 1_555 ? ? ? ? ? ? ? 1.335 ? ? covale44 covale both ? H MLU 2 C ? ? ? 1_555 H DLY 3 N ? ? H MLU 2 H DLY 3 1_555 ? ? ? ? ? ? ? 1.327 ? ? covale45 covale both ? H DLY 3 C ? ? ? 1_555 H SER 4 N ? ? H DLY 3 H SER 4 1_555 ? ? ? ? ? ? ? 1.331 ? ? covale46 covale both ? H SER 4 C ? ? ? 1_555 H DTH 5 N ? ? H SER 4 H DTH 5 1_555 ? ? ? ? ? ? ? 1.328 ? ? covale47 covale both ? H DTH 5 C ? ? ? 1_555 H ALA 6 N ? ? H DTH 5 H ALA 6 1_555 ? ? ? ? ? ? ? 1.330 ? ? covale48 covale one ? H DTH 5 OG1 ? ? ? 1_555 H LEU 8 C ? ? H DTH 5 H LEU 8 1_555 ? ? ? ? ? ? ? 1.324 ? ? metalc1 metalc ? ? A PHE 1 O ? ? ? 1_555 I CD . CD ? ? A PHE 1 A CD 101 1_555 ? ? ? ? ? ? ? 2.465 ? ? metalc2 metalc ? ? I CD . CD ? ? ? 1_555 G PHE 1 N ? ? A CD 101 G PHE 1 1_555 ? ? ? ? ? ? ? 2.654 ? ? metalc3 metalc ? ? I CD . CD ? ? ? 1_555 G PHE 1 O ? ? A CD 101 G PHE 1 1_555 ? ? ? ? ? ? ? 2.521 ? ? metalc4 metalc ? ? B PHE 1 N ? ? ? 1_555 J CD . CD ? ? B PHE 1 B CD 101 1_555 ? ? ? ? ? ? ? 2.658 ? ? metalc5 metalc ? ? B PHE 1 O ? ? ? 1_555 J CD . CD ? ? B PHE 1 B CD 101 1_555 ? ? ? ? ? ? ? 2.571 ? ? metalc6 metalc ? ? J CD . CD ? ? ? 1_555 D PHE 1 N ? ? B CD 101 D PHE 1 1_555 ? ? ? ? ? ? ? 2.678 ? ? metalc7 metalc ? ? J CD . CD ? ? ? 1_555 D PHE 1 O ? ? B CD 101 D PHE 1 1_555 ? ? ? ? ? ? ? 2.425 ? ? metalc8 metalc ? ? C PHE 1 N ? ? ? 1_555 L CD . CD ? ? C PHE 1 C CD 102 1_555 ? ? ? ? ? ? ? 2.649 ? ? metalc9 metalc ? ? C PHE 1 O ? ? ? 1_555 L CD . CD ? ? C PHE 1 C CD 102 1_555 ? ? ? ? ? ? ? 2.446 ? ? metalc10 metalc ? ? L CD . CD ? ? ? 1_555 R HOH . O ? ? C CD 102 C HOH 209 1_555 ? ? ? ? ? ? ? 2.680 ? ? metalc11 metalc ? ? L CD . CD ? ? ? 1_555 H PHE 1 O ? ? C CD 102 H PHE 1 1_555 ? ? ? ? ? ? ? 2.521 ? ? metalc12 metalc ? ? E PHE 1 O ? ? ? 1_555 M CD . CD ? ? E PHE 1 E CD 101 1_555 ? ? ? ? ? ? ? 2.491 ? ? metalc13 metalc ? ? M CD . CD ? ? ? 1_555 F PHE 1 N ? ? E CD 101 F PHE 1 1_555 ? ? ? ? ? ? ? 2.698 ? ? metalc14 metalc ? ? M CD . CD ? ? ? 1_555 F PHE 1 O ? ? E CD 101 F PHE 1 1_555 ? ? ? ? ? ? ? 2.535 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 O ? A PHE 1 ? A PHE 1 ? 1_555 CD ? I CD . ? A CD 101 ? 1_555 N ? G PHE 1 ? G PHE 1 ? 1_555 106.9 ? 2 O ? A PHE 1 ? A PHE 1 ? 1_555 CD ? I CD . ? A CD 101 ? 1_555 O ? G PHE 1 ? G PHE 1 ? 1_555 89.5 ? 3 N ? G PHE 1 ? G PHE 1 ? 1_555 CD ? I CD . ? A CD 101 ? 1_555 O ? G PHE 1 ? G PHE 1 ? 1_555 65.3 ? 4 N ? B PHE 1 ? B PHE 1 ? 1_555 CD ? J CD . ? B CD 101 ? 1_555 O ? B PHE 1 ? B PHE 1 ? 1_555 66.9 ? 5 N ? B PHE 1 ? B PHE 1 ? 1_555 CD ? J CD . ? B CD 101 ? 1_555 N ? D PHE 1 ? D PHE 1 ? 1_555 168.1 ? 6 O ? B PHE 1 ? B PHE 1 ? 1_555 CD ? J CD . ? B CD 101 ? 1_555 N ? D PHE 1 ? D PHE 1 ? 1_555 101.2 ? 7 N ? B PHE 1 ? B PHE 1 ? 1_555 CD ? J CD . ? B CD 101 ? 1_555 O ? D PHE 1 ? D PHE 1 ? 1_555 109.9 ? 8 O ? B PHE 1 ? B PHE 1 ? 1_555 CD ? J CD . ? B CD 101 ? 1_555 O ? D PHE 1 ? D PHE 1 ? 1_555 79.7 ? 9 N ? D PHE 1 ? D PHE 1 ? 1_555 CD ? J CD . ? B CD 101 ? 1_555 O ? D PHE 1 ? D PHE 1 ? 1_555 66.6 ? 10 N ? C PHE 1 ? C PHE 1 ? 1_555 CD ? L CD . ? C CD 102 ? 1_555 O ? C PHE 1 ? C PHE 1 ? 1_555 71.0 ? 11 N ? C PHE 1 ? C PHE 1 ? 1_555 CD ? L CD . ? C CD 102 ? 1_555 O ? R HOH . ? C HOH 209 ? 1_555 87.2 ? 12 O ? C PHE 1 ? C PHE 1 ? 1_555 CD ? L CD . ? C CD 102 ? 1_555 O ? R HOH . ? C HOH 209 ? 1_555 157.1 ? 13 N ? C PHE 1 ? C PHE 1 ? 1_555 CD ? L CD . ? C CD 102 ? 1_555 O ? H PHE 1 ? H PHE 1 ? 1_555 92.1 ? 14 O ? C PHE 1 ? C PHE 1 ? 1_555 CD ? L CD . ? C CD 102 ? 1_555 O ? H PHE 1 ? H PHE 1 ? 1_555 97.0 ? 15 O ? R HOH . ? C HOH 209 ? 1_555 CD ? L CD . ? C CD 102 ? 1_555 O ? H PHE 1 ? H PHE 1 ? 1_555 90.6 ? 16 O ? E PHE 1 ? E PHE 1 ? 1_555 CD ? M CD . ? E CD 101 ? 1_555 N ? F PHE 1 ? F PHE 1 ? 1_555 99.1 ? 17 O ? E PHE 1 ? E PHE 1 ? 1_555 CD ? M CD . ? E CD 101 ? 1_555 O ? F PHE 1 ? F PHE 1 ? 1_555 89.7 ? 18 N ? F PHE 1 ? F PHE 1 ? 1_555 CD ? M CD . ? E CD 101 ? 1_555 O ? F PHE 1 ? F PHE 1 ? 1_555 69.7 ? # _pdbx_entry_details.entry_id 9BIC _pdbx_entry_details.has_ligand_of_interest N _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_protein_modification ? # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O C HOH 209 ? ? O H HOH 209 ? ? 1.91 2 1 O G HOH 103 ? ? O G HOH 109 ? ? 2.10 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 LEU C 7 ? ? -106.82 -66.14 2 1 LEU D 7 ? ? -100.69 -63.61 # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id A _pdbx_struct_special_symmetry.auth_comp_id HOH _pdbx_struct_special_symmetry.auth_seq_id 201 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id P _pdbx_struct_special_symmetry.label_comp_id HOH _pdbx_struct_special_symmetry.label_seq_id . # loop_ _pdbx_refine_tls.id _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[1][1]_esd _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][2]_esd _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[1][3]_esd _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[2][2]_esd _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.T[2][3]_esd _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[3][3]_esd _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[1][1]_esd _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][2]_esd _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[1][3]_esd _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[2][2]_esd _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.L[2][3]_esd _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[3][3]_esd _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][1]_esd _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][2]_esd _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[1][3]_esd _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][1]_esd _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][2]_esd _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][3]_esd _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][1]_esd _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][2]_esd _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[3][3]_esd 1 'X-RAY DIFFRACTION' ? refined 24.4692 45.8818 -21.3307 0.0922 ? 0.0195 ? -0.0071 ? 0.0636 ? -0.0027 ? 0.1215 ? 1.3499 ? 1.9285 ? 0.2255 ? 3.2806 ? 1.0826 ? 2.4735 ? 0.0851 ? -0.0131 ? 0.2675 ? -0.1718 ? -0.0659 ? -0.1753 ? -0.2904 ? -0.0457 ? -0.0196 ? 2 'X-RAY DIFFRACTION' ? refined 17.7421 58.5922 -23.2792 0.1378 ? 0.0296 ? -0.0110 ? 0.1124 ? -0.0064 ? 0.0667 ? 4.0938 ? 3.6469 ? -3.0824 ? 3.4625 ? -2.9794 ? 3.2079 ? 0.1833 ? 0.1782 ? 0.3911 ? 0.2512 ? 0.1503 ? 0.2744 ? -0.0188 ? -0.0469 ? -0.2936 ? 3 'X-RAY DIFFRACTION' ? refined 28.4488 47.5704 -12.4170 0.0917 ? 0.0227 ? -0.0006 ? 0.1311 ? -0.0319 ? 0.0815 ? 1.5348 ? -1.2820 ? -0.5622 ? 2.6160 ? 0.7930 ? 0.2729 ? -0.0933 ? -0.0265 ? -0.0400 ? 0.4289 ? 0.0895 ? 0.0635 ? 0.0699 ? -0.0929 ? 0.0081 ? 4 'X-RAY DIFFRACTION' ? refined 15.9837 47.7559 -17.3481 0.1393 ? -0.0054 ? 0.0514 ? -0.0059 ? 0.0312 ? 0.1197 ? 0.3624 ? 0.3047 ? -0.0647 ? 1.0409 ? -1.2874 ? 1.9533 ? -0.1046 ? 0.0272 ? -0.1227 ? -0.3120 ? 0.1173 ? -0.1054 ? 0.2078 ? 0.0753 ? 0.0573 ? 5 'X-RAY DIFFRACTION' ? refined 19.7843 47.1006 -6.4989 0.3165 ? -0.0158 ? -0.0085 ? 0.2305 ? -0.0455 ? 0.0858 ? 2.2804 ? -0.5810 ? 2.6403 ? 0.9067 ? -0.4376 ? 3.1641 ? -0.0468 ? -0.6585 ? 0.0705 ? 0.2616 ? 0.0620 ? 0.0183 ? 0.0589 ? -0.2431 ? -0.0459 ? 6 'X-RAY DIFFRACTION' ? refined 14.3389 58.7394 -13.2631 0.1193 ? -0.0565 ? -0.0131 ? 0.1238 ? -0.0266 ? 0.2141 ? 1.9391 ? -0.3783 ? -0.3799 ? 0.1910 ? -0.3260 ? 1.4533 ? -0.1489 ? 0.2064 ? -0.0582 ? -0.0623 ? 0.1799 ? -0.1250 ? -0.2657 ? 0.4354 ? -0.0368 ? 7 'X-RAY DIFFRACTION' ? refined 26.1819 58.2266 -17.3974 0.1197 ? -0.0349 ? -0.1012 ? 0.0892 ? 0.0421 ? 0.2010 ? 1.2764 ? 1.1134 ? 0.7981 ? 1.4039 ? 0.8415 ? 1.2611 ? -0.0934 ? 0.0486 ? 0.1297 ? -0.0346 ? 0.0016 ? 0.0299 ? -0.0679 ? -0.0043 ? 0.0773 ? 8 'X-RAY DIFFRACTION' ? refined 22.6118 59.4850 -6.4707 0.0509 ? -0.0020 ? -0.0127 ? 0.0916 ? 0.0153 ? 0.0593 ? 0.6037 ? -0.4495 ? -0.3531 ? 1.4007 ? 0.3396 ? 0.8157 ? 0.1243 ? 0.0629 ? -0.0848 ? -0.0017 ? -0.1797 ? -0.0095 ? 0.0994 ? -0.0224 ? 0.0033 ? # loop_ _pdbx_refine_tls_group.id _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_PDB_ins_code _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_PDB_ins_code _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 1 'X-RAY DIFFRACTION' 1 ? ? ? ? ? ? ? ? ? ? ? ;chain 'A' and (resid 1 through 8 ) ; 2 'X-RAY DIFFRACTION' 2 ? ? ? ? ? ? ? ? ? ? ? ;chain 'B' and (resid 1 through 8 ) ; 3 'X-RAY DIFFRACTION' 3 ? ? ? ? ? ? ? ? ? ? ? ;chain 'C' and (resid 1 through 8 ) ; 4 'X-RAY DIFFRACTION' 4 ? ? ? ? ? ? ? ? ? ? ? ;chain 'D' and (resid 1 through 8 ) ; 5 'X-RAY DIFFRACTION' 5 ? ? ? ? ? ? ? ? ? ? ? ;chain 'E' and (resid 1 through 8 ) ; 6 'X-RAY DIFFRACTION' 6 ? ? ? ? ? ? ? ? ? ? ? ;chain 'F' and (resid 1 through 8 ) ; 7 'X-RAY DIFFRACTION' 7 ? ? ? ? ? ? ? ? ? ? ? ;chain 'G' and (resid 1 through 8 ) ; 8 'X-RAY DIFFRACTION' 8 ? ? ? ? ? ? ? ? ? ? ? ;chain 'H' and (resid 1 through 8 ) ; # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 CD CD CD N N 14 DLY N N N N 15 DLY CA C N R 16 DLY C C N N 17 DLY O O N N 18 DLY CB C N N 19 DLY CG C N N 20 DLY CD C N N 21 DLY CE C N N 22 DLY NZ N N N 23 DLY OXT O N N 24 DLY H H N N 25 DLY H2 H N N 26 DLY HA H N N 27 DLY HB2 H N N 28 DLY HB3 H N N 29 DLY HG2 H N N 30 DLY HG3 H N N 31 DLY HD2 H N N 32 DLY HD3 H N N 33 DLY HE2 H N N 34 DLY HE3 H N N 35 DLY HZ1 H N N 36 DLY HZ2 H N N 37 DLY HXT H N N 38 DTH N N N N 39 DTH CA C N R 40 DTH CB C N S 41 DTH CG2 C N N 42 DTH OG1 O N N 43 DTH C C N N 44 DTH O O N N 45 DTH OXT O N N 46 DTH H H N N 47 DTH H2 H N N 48 DTH HA H N N 49 DTH HB H N N 50 DTH HG21 H N N 51 DTH HG22 H N N 52 DTH HG23 H N N 53 DTH HG1 H N N 54 DTH HXT H N N 55 HOH O O N N 56 HOH H1 H N N 57 HOH H2 H N N 58 LEU N N N N 59 LEU CA C N S 60 LEU C C N N 61 LEU O O N N 62 LEU CB C N N 63 LEU CG C N N 64 LEU CD1 C N N 65 LEU CD2 C N N 66 LEU OXT O N N 67 LEU H H N N 68 LEU H2 H N N 69 LEU HA H N N 70 LEU HB2 H N N 71 LEU HB3 H N N 72 LEU HG H N N 73 LEU HD11 H N N 74 LEU HD12 H N N 75 LEU HD13 H N N 76 LEU HD21 H N N 77 LEU HD22 H N N 78 LEU HD23 H N N 79 LEU HXT H N N 80 MLU N N N N 81 MLU CN C N N 82 MLU CA C N R 83 MLU C C N N 84 MLU O O N N 85 MLU CB C N N 86 MLU CG C N N 87 MLU CD1 C N N 88 MLU CD2 C N N 89 MLU OXT O N N 90 MLU H H N N 91 MLU HCN1 H N N 92 MLU HCN2 H N N 93 MLU HCN3 H N N 94 MLU HA H N N 95 MLU HB2 H N N 96 MLU HB3 H N N 97 MLU HXT H N N 98 MLU HG H N N 99 MLU HD11 H N N 100 MLU HD12 H N N 101 MLU HD13 H N N 102 MLU HD21 H N N 103 MLU HD22 H N N 104 MLU HD23 H N N 105 PHE N N N N 106 PHE CA C N S 107 PHE C C N N 108 PHE O O N N 109 PHE CB C N N 110 PHE CG C Y N 111 PHE CD1 C Y N 112 PHE CD2 C Y N 113 PHE CE1 C Y N 114 PHE CE2 C Y N 115 PHE CZ C Y N 116 PHE OXT O N N 117 PHE H H N N 118 PHE H2 H N N 119 PHE HA H N N 120 PHE HB2 H N N 121 PHE HB3 H N N 122 PHE HD1 H N N 123 PHE HD2 H N N 124 PHE HE1 H N N 125 PHE HE2 H N N 126 PHE HZ H N N 127 PHE HXT H N N 128 SER N N N N 129 SER CA C N S 130 SER C C N N 131 SER O O N N 132 SER CB C N N 133 SER OG O N N 134 SER OXT O N N 135 SER H H N N 136 SER H2 H N N 137 SER HA H N N 138 SER HB2 H N N 139 SER HB3 H N N 140 SER HG H N N 141 SER HXT H N N 142 SO4 S S N N 143 SO4 O1 O N N 144 SO4 O2 O N N 145 SO4 O3 O N N 146 SO4 O4 O N N 147 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 DLY N CA sing N N 13 DLY N H sing N N 14 DLY N H2 sing N N 15 DLY CA C sing N N 16 DLY CA CB sing N N 17 DLY CA HA sing N N 18 DLY C O doub N N 19 DLY C OXT sing N N 20 DLY CB CG sing N N 21 DLY CB HB2 sing N N 22 DLY CB HB3 sing N N 23 DLY CG CD sing N N 24 DLY CG HG2 sing N N 25 DLY CG HG3 sing N N 26 DLY CD CE sing N N 27 DLY CD HD2 sing N N 28 DLY CD HD3 sing N N 29 DLY CE NZ sing N N 30 DLY CE HE2 sing N N 31 DLY CE HE3 sing N N 32 DLY NZ HZ1 sing N N 33 DLY NZ HZ2 sing N N 34 DLY OXT HXT sing N N 35 DTH N CA sing N N 36 DTH N H sing N N 37 DTH N H2 sing N N 38 DTH CA CB sing N N 39 DTH CA C sing N N 40 DTH CA HA sing N N 41 DTH CB CG2 sing N N 42 DTH CB OG1 sing N N 43 DTH CB HB sing N N 44 DTH CG2 HG21 sing N N 45 DTH CG2 HG22 sing N N 46 DTH CG2 HG23 sing N N 47 DTH OG1 HG1 sing N N 48 DTH C O doub N N 49 DTH C OXT sing N N 50 DTH OXT HXT sing N N 51 HOH O H1 sing N N 52 HOH O H2 sing N N 53 LEU N CA sing N N 54 LEU N H sing N N 55 LEU N H2 sing N N 56 LEU CA C sing N N 57 LEU CA CB sing N N 58 LEU CA HA sing N N 59 LEU C O doub N N 60 LEU C OXT sing N N 61 LEU CB CG sing N N 62 LEU CB HB2 sing N N 63 LEU CB HB3 sing N N 64 LEU CG CD1 sing N N 65 LEU CG CD2 sing N N 66 LEU CG HG sing N N 67 LEU CD1 HD11 sing N N 68 LEU CD1 HD12 sing N N 69 LEU CD1 HD13 sing N N 70 LEU CD2 HD21 sing N N 71 LEU CD2 HD22 sing N N 72 LEU CD2 HD23 sing N N 73 LEU OXT HXT sing N N 74 MLU N CN sing N N 75 MLU N CA sing N N 76 MLU CA C sing N N 77 MLU CA CB sing N N 78 MLU C O doub N N 79 MLU C OXT sing N N 80 MLU CB CG sing N N 81 MLU CG CD1 sing N N 82 MLU CG CD2 sing N N 83 MLU N H sing N N 84 MLU CN HCN1 sing N N 85 MLU CN HCN2 sing N N 86 MLU CN HCN3 sing N N 87 MLU CA HA sing N N 88 MLU CB HB2 sing N N 89 MLU CB HB3 sing N N 90 MLU OXT HXT sing N N 91 MLU CG HG sing N N 92 MLU CD1 HD11 sing N N 93 MLU CD1 HD12 sing N N 94 MLU CD1 HD13 sing N N 95 MLU CD2 HD21 sing N N 96 MLU CD2 HD22 sing N N 97 MLU CD2 HD23 sing N N 98 PHE N CA sing N N 99 PHE N H sing N N 100 PHE N H2 sing N N 101 PHE CA C sing N N 102 PHE CA CB sing N N 103 PHE CA HA sing N N 104 PHE C O doub N N 105 PHE C OXT sing N N 106 PHE CB CG sing N N 107 PHE CB HB2 sing N N 108 PHE CB HB3 sing N N 109 PHE CG CD1 doub Y N 110 PHE CG CD2 sing Y N 111 PHE CD1 CE1 sing Y N 112 PHE CD1 HD1 sing N N 113 PHE CD2 CE2 doub Y N 114 PHE CD2 HD2 sing N N 115 PHE CE1 CZ doub Y N 116 PHE CE1 HE1 sing N N 117 PHE CE2 CZ sing Y N 118 PHE CE2 HE2 sing N N 119 PHE CZ HZ sing N N 120 PHE OXT HXT sing N N 121 SER N CA sing N N 122 SER N H sing N N 123 SER N H2 sing N N 124 SER CA C sing N N 125 SER CA CB sing N N 126 SER CA HA sing N N 127 SER C O doub N N 128 SER C OXT sing N N 129 SER CB OG sing N N 130 SER CB HB2 sing N N 131 SER CB HB3 sing N N 132 SER OG HG sing N N 133 SER OXT HXT sing N N 134 SO4 S O1 doub N N 135 SO4 S O2 doub N N 136 SO4 S O3 sing N N 137 SO4 S O4 sing N N 138 # _pdbx_audit_support.funding_organization 'National Institutes of Health/National Institute Of Allergy and Infectious Diseases (NIH/NIAID)' _pdbx_audit_support.country 'United States' _pdbx_audit_support.grant_number AI168966 _pdbx_audit_support.ordinal 1 # _atom_sites.entry_id 9BIC _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.Cartn_transform_axes ? _atom_sites.fract_transf_matrix[1][1] 0.042546 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.020932 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.018492 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C CD H N O S # loop_ # loop_ #