HEADER METAL BINDING PROTEIN 29-APR-24 9BL1 TITLE CRYSTAL STRUCTURE OF HEME-BINDING PROTEIN FROM POPULUS TRICHOCARPA COMPND MOL_ID: 1; COMPND 2 MOLECULE: HEME-BINDING PROTEIN, PTHOZ1; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: POPULUS TRICHOCARPA; SOURCE 3 ORGANISM_COMMON: BLACK COTTONWOOD; SOURCE 4 ORGANISM_TAXID: 3694; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS HEME BINDING PROTEIN, SPLIT-BARREL FAMILY, SAD PHASING, METAL BINDING KEYWDS 2 PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR D.KUMARAN,N.GROSJEAN,E.C.BLABY REVDAT 1 12-MAR-25 9BL1 0 JRNL AUTH N.GROSJEAN,L.ZHANG,D.KUMARAN,M.XIE,A.FAHEY,K.SANTIAGO,F.HU, JRNL AUTH 2 M.REGULSKI,I.K.BLABY,D.WARE,C.E.BLABY-HAAS JRNL TITL FUNCTIONAL DIVERSIFICATION WITHIN THE HEME-BINDING JRNL TITL 2 SPLIT-BARREL FAMILY. JRNL REF J.BIOL.CHEM. V. 300 07888 2024 JRNL REFN ESSN 1083-351X JRNL PMID 39395795 JRNL DOI 10.1016/J.JBC.2024.107888 REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0267 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 38.68 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 96.6 REMARK 3 NUMBER OF REFLECTIONS : 24413 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.209 REMARK 3 R VALUE (WORKING SET) : 0.206 REMARK 3 FREE R VALUE : 0.255 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 1262 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.80 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.85 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1429 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 78.15 REMARK 3 BIN R VALUE (WORKING SET) : 0.3670 REMARK 3 BIN FREE R VALUE SET COUNT : 70 REMARK 3 BIN FREE R VALUE : 0.4140 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2062 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 2 REMARK 3 SOLVENT ATOMS : 97 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 42.39 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.70000 REMARK 3 B22 (A**2) : -0.70000 REMARK 3 B33 (A**2) : 1.39000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.142 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.140 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.098 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 3.212 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.957 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.925 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2107 ; 0.010 ; 0.013 REMARK 3 BOND LENGTHS OTHERS (A): 1989 ; 0.001 ; 0.015 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2858 ; 1.646 ; 1.647 REMARK 3 BOND ANGLES OTHERS (DEGREES): 4591 ; 1.340 ; 1.581 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 263 ; 7.372 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 108 ;38.076 ;22.685 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 341 ;15.525 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 12 ;10.968 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 278 ; 0.079 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2386 ; 0.008 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 470 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1055 ; 4.055 ; 4.196 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1054 ; 4.048 ; 4.193 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1317 ; 6.129 ; 6.277 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 1318 ; 6.131 ; 6.279 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1051 ; 4.579 ; 4.755 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 1052 ; 4.577 ; 4.758 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 1542 ; 7.143 ; 6.915 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 2229 ;10.436 ;50.501 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 2222 ;10.437 ;50.500 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 9BL1 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 30-APR-24. REMARK 100 THE DEPOSITION ID IS D_1000283634. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 30-OCT-20 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS-II REMARK 200 BEAMLINE : 17-ID-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.979 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 25732 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.7 REMARK 200 DATA REDUNDANCY : 20.00 REMARK 200 R MERGE (I) : 0.05900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 10.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.85 REMARK 200 COMPLETENESS FOR SHELL (%) : 79.5 REMARK 200 DATA REDUNDANCY IN SHELL : 8.30 REMARK 200 R MERGE FOR SHELL (I) : 1.03000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 44.10 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.20 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20% PEG MONOMETHYL ETHER 2000, 10 MM REMARK 280 NICKEL CHLORIDE AND 100 MM SODIUM ACETATE PH 5.0, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 42 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -Y+1/2,X+1/2,Z+1/2 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/2 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 38.65300 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 38.65300 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 46.21000 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 38.65300 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 38.65300 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 46.21000 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 38.65300 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 38.65300 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 46.21000 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 38.65300 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 38.65300 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 46.21000 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3060 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 26970 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -59.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 92.42000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MSE A 1 REMARK 465 SER A 2 REMARK 465 VAL A 3 REMARK 465 ALA A 4 REMARK 465 GLN A 5 REMARK 465 SER A 6 REMARK 465 SER A 7 REMARK 465 THR A 8 REMARK 465 GLN A 9 REMARK 465 ALA A 10 REMARK 465 VAL A 11 REMARK 465 SER A 12 REMARK 465 THR A 13 REMARK 465 GLY A 14 REMARK 465 ASP A 15 REMARK 465 VAL A 16 REMARK 465 ASN A 17 REMARK 465 SER A 18 REMARK 465 ASP A 19 REMARK 465 ALA A 20 REMARK 465 SER A 285 REMARK 465 HIS A 286 REMARK 465 HIS A 287 REMARK 465 HIS A 288 REMARK 465 HIS A 289 REMARK 465 HIS A 290 REMARK 465 HIS A 291 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 HIS A 90 -53.98 72.73 REMARK 500 ASP A 110 101.59 -54.67 REMARK 500 LYS A 140 -23.94 -141.42 REMARK 500 PHE A 145 5.59 54.33 REMARK 500 ASP A 148 136.38 -178.51 REMARK 500 VAL A 168 -78.24 -97.12 REMARK 500 THR A 170 141.71 -176.76 REMARK 500 THR A 171 -70.88 -105.82 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NI A 401 NI REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 61 NE2 REMARK 620 2 HIS A 90 NE2 97.5 REMARK 620 3 HIS A 119 NE2 63.0 47.9 REMARK 620 4 GLN A 163 NE2 66.3 48.2 4.5 REMARK 620 5 GLU A 279 OE2 107.1 32.5 44.1 41.1 REMARK 620 6 HOH A 508 O 89.5 85.3 115.7 119.5 115.9 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NI A 402 NI REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 201 NE2 REMARK 620 2 HIS A 206 NE2 98.1 REMARK 620 3 HOH A 501 O 106.8 94.6 REMARK 620 4 HOH A 570 O 87.9 89.7 163.8 REMARK 620 5 HOH A 588 O 165.6 92.9 62.8 101.5 REMARK 620 6 HOH A 589 O 89.0 159.4 101.8 71.2 83.8 REMARK 620 N 1 2 3 4 5 DBREF1 9BL1 A 2 278 UNP A0A3N7FVG6_POPTR DBREF2 9BL1 A A0A3N7FVG6 3 279 SEQADV 9BL1 MSE A 1 UNP A0A3N7FVG INITIATING METHIONINE SEQADV 9BL1 GLU A 279 UNP A0A3N7FVG EXPRESSION TAG SEQADV 9BL1 ASN A 280 UNP A0A3N7FVG EXPRESSION TAG SEQADV 9BL1 LEU A 281 UNP A0A3N7FVG EXPRESSION TAG SEQADV 9BL1 TYR A 282 UNP A0A3N7FVG EXPRESSION TAG SEQADV 9BL1 PHE A 283 UNP A0A3N7FVG EXPRESSION TAG SEQADV 9BL1 GLN A 284 UNP A0A3N7FVG EXPRESSION TAG SEQADV 9BL1 SER A 285 UNP A0A3N7FVG EXPRESSION TAG SEQADV 9BL1 HIS A 286 UNP A0A3N7FVG EXPRESSION TAG SEQADV 9BL1 HIS A 287 UNP A0A3N7FVG EXPRESSION TAG SEQADV 9BL1 HIS A 288 UNP A0A3N7FVG EXPRESSION TAG SEQADV 9BL1 HIS A 289 UNP A0A3N7FVG EXPRESSION TAG SEQADV 9BL1 HIS A 290 UNP A0A3N7FVG EXPRESSION TAG SEQADV 9BL1 HIS A 291 UNP A0A3N7FVG EXPRESSION TAG SEQRES 1 A 291 MSE SER VAL ALA GLN SER SER THR GLN ALA VAL SER THR SEQRES 2 A 291 GLY ASP VAL ASN SER ASP ALA ASN VAL PHE GLN LEU ILE SEQRES 3 A 291 GLN THR HIS GLN GLU LYS ALA ALA ARG LEU PRO PRO VAL SEQRES 4 A 291 GLU GLU ILE ARG THR VAL LEU ASP GLN SER THR HIS GLY SEQRES 5 A 291 MSE LEU SER THR PHE SER GLN LYS HIS GLY GLY TYR PRO SEQRES 6 A 291 SER GLY SER VAL VAL ASP PHE ALA CYS ASP ALA ASP GLY SEQRES 7 A 291 SER PRO ILE VAL ALA VAL SER SER TRP ALA VAL HIS ALA SEQRES 8 A 291 LYS ASP LEU ILE ALA ASN PRO LYS CYS SER LEU LEU VAL SEQRES 9 A 291 ALA LYS ASP PRO GLU ASP ARG THR ASP LEU VAL ILE THR SEQRES 10 A 291 LEU HIS GLY ASP SER ILE PRO VAL SER GLU LYS ASP VAL SEQRES 11 A 291 THR ALA VAL ARG THR ALA TYR LEU ALA LYS HIS PRO GLY SEQRES 12 A 291 ALA PHE ARG VAL ASP PHE GLY ASP PHE GLN PHE MSE ARG SEQRES 13 A 291 ILE GLU PRO LYS ALA VAL GLN TYR VAL SER GLY VAL ALA SEQRES 14 A 291 THR THR LEU PHE GLY SER GLY GLU PHE SER LYS GLU GLU SEQRES 15 A 291 TYR GLN THR ALA LYS VAL ASP PRO ILE ALA GLN PHE SER SEQRES 16 A 291 LYS PRO VAL ALA SER HIS MSE ASN ARG ASP HIS ALA GLU SEQRES 17 A 291 ASP THR ARG LEU ILE VAL GLN HIS SER THR SER ILE PRO SEQRES 18 A 291 VAL ASP SER ALA TYR MSE LEU ASP VAL ASP SER LEU GLY SEQRES 19 A 291 PHE ASN VAL LYS ALA VAL TYR GLN GLY ASN THR TYR LYS SEQRES 20 A 291 LEU ARG ILE PRO PHE PRO ARG ARG ALA GLU GLU ARG LYS SEQRES 21 A 291 ASP VAL LYS THR LEU VAL VAL GLU MSE LEU GLN ALA ALA SEQRES 22 A 291 LYS SER GLN ILE LYS GLU ASN LEU TYR PHE GLN SER HIS SEQRES 23 A 291 HIS HIS HIS HIS HIS MODRES 9BL1 MSE A 53 MET MODIFIED RESIDUE MODRES 9BL1 MSE A 155 MET MODIFIED RESIDUE MODRES 9BL1 MSE A 202 MET MODIFIED RESIDUE MODRES 9BL1 MSE A 227 MET MODIFIED RESIDUE MODRES 9BL1 MSE A 269 MET MODIFIED RESIDUE HET MSE A 53 8 HET MSE A 155 8 HET MSE A 202 8 HET MSE A 227 8 HET MSE A 269 8 HET NI A 401 1 HET NI A 402 1 HETNAM MSE SELENOMETHIONINE HETNAM NI NICKEL (II) ION FORMUL 1 MSE 5(C5 H11 N O2 SE) FORMUL 2 NI 2(NI 2+) FORMUL 4 HOH *97(H2 O) HELIX 1 AA1 VAL A 22 ALA A 33 1 12 HELIX 2 AA2 PRO A 37 SER A 49 1 13 HELIX 3 AA3 HIS A 90 ILE A 95 5 6 HELIX 4 AA4 SER A 126 LYS A 128 5 3 HELIX 5 AA5 ASP A 129 ALA A 139 1 11 HELIX 6 AA6 LYS A 180 ALA A 186 1 7 HELIX 7 AA7 ILE A 191 GLN A 193 5 3 HELIX 8 AA8 PHE A 194 HIS A 206 1 13 HELIX 9 AA9 HIS A 206 SER A 219 1 14 HELIX 10 AB1 GLU A 258 PHE A 283 1 26 SHEET 1 AA1 7 SER A 66 ASP A 71 0 SHEET 2 AA1 7 HIS A 51 THR A 56 -1 N GLY A 52 O VAL A 70 SHEET 3 AA1 7 LYS A 99 ALA A 105 -1 O LEU A 103 N MSE A 53 SHEET 4 AA1 7 VAL A 115 PRO A 124 -1 O ILE A 116 N VAL A 104 SHEET 5 AA1 7 GLN A 153 VAL A 165 -1 O LYS A 160 N HIS A 119 SHEET 6 AA1 7 PRO A 80 VAL A 84 -1 N VAL A 84 O GLN A 153 SHEET 7 AA1 7 ALA A 73 CYS A 74 -1 N ALA A 73 O ILE A 81 SHEET 1 AA2 6 SER A 66 ASP A 71 0 SHEET 2 AA2 6 HIS A 51 THR A 56 -1 N GLY A 52 O VAL A 70 SHEET 3 AA2 6 LYS A 99 ALA A 105 -1 O LEU A 103 N MSE A 53 SHEET 4 AA2 6 VAL A 115 PRO A 124 -1 O ILE A 116 N VAL A 104 SHEET 5 AA2 6 GLN A 153 VAL A 165 -1 O LYS A 160 N HIS A 119 SHEET 6 AA2 6 SER A 175 SER A 179 -1 O PHE A 178 N VAL A 162 SHEET 1 AA3 3 SER A 224 ASP A 231 0 SHEET 2 AA3 3 GLY A 234 TYR A 241 -1 O ASN A 236 N LEU A 228 SHEET 3 AA3 3 ASN A 244 PRO A 251 -1 O TYR A 246 N ALA A 239 LINK C GLY A 52 N MSE A 53 1555 1555 1.34 LINK C MSE A 53 N LEU A 54 1555 1555 1.34 LINK C PHE A 154 N MSE A 155 1555 1555 1.34 LINK C MSE A 155 N ARG A 156 1555 1555 1.32 LINK C HIS A 201 N MSE A 202 1555 1555 1.35 LINK C MSE A 202 N ASN A 203 1555 1555 1.33 LINK C TYR A 226 N MSE A 227 1555 1555 1.34 LINK C MSE A 227 N LEU A 228 1555 1555 1.34 LINK C GLU A 268 N MSE A 269 1555 1555 1.35 LINK C MSE A 269 N LEU A 270 1555 1555 1.34 LINK NE2 HIS A 61 NI NI A 401 1555 1555 2.15 LINK NE2 HIS A 90 NI NI A 401 1555 1555 2.14 LINK NE2 HIS A 119 NI NI A 401 1555 7556 2.11 LINK NE2 GLN A 163 NI NI A 401 1555 7556 1.97 LINK NE2 HIS A 201 NI NI A 402 1555 1555 2.18 LINK NE2 HIS A 206 NI NI A 402 1555 1555 2.18 LINK OE2 GLU A 279 NI NI A 401 1555 4554 2.09 LINK NI NI A 401 O HOH A 508 1555 3545 2.18 LINK NI NI A 402 O HOH A 501 1555 1555 2.00 LINK NI NI A 402 O HOH A 570 1555 1555 1.99 LINK NI NI A 402 O HOH A 588 1555 1555 2.21 LINK NI NI A 402 O HOH A 589 1555 1555 2.41 CRYST1 77.306 77.306 92.420 90.00 90.00 90.00 P 42 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012936 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012936 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010820 0.00000 HETATM 258 N MSE A 53 18.320 11.702 46.389 1.00 24.73 N HETATM 259 CA MSE A 53 17.000 11.757 47.018 1.00 27.39 C HETATM 260 C MSE A 53 16.285 10.443 46.718 1.00 26.30 C HETATM 261 O MSE A 53 16.081 10.105 45.558 1.00 25.44 O HETATM 262 CB MSE A 53 16.200 12.900 46.397 1.00 33.79 C HETATM 263 CG MSE A 53 17.054 14.109 46.071 1.00 55.69 C HETATM 264 SE MSE A 53 16.747 15.516 47.408 1.00 95.59 SE HETATM 265 CE MSE A 53 15.608 14.706 48.785 1.00 97.58 C HETATM 1026 N MSE A 155 22.369 -1.874 51.947 1.00 36.32 N HETATM 1027 CA MSE A 155 21.452 -2.246 50.885 1.00 35.25 C HETATM 1028 C MSE A 155 22.085 -1.851 49.555 1.00 31.75 C HETATM 1029 O MSE A 155 22.633 -0.767 49.427 1.00 38.54 O HETATM 1030 CB MSE A 155 20.109 -1.540 51.065 1.00 30.00 C HETATM 1031 CG MSE A 155 19.327 -2.015 52.278 1.00 30.00 C HETATM 1032 SE MSE A 155 18.911 -3.887 52.271 1.00 30.00 SE HETATM 1033 CE MSE A 155 17.640 -3.884 50.792 1.00 30.00 C HETATM 1387 N MSE A 202 43.251 24.074 39.429 1.00 34.30 N HETATM 1388 CA MSE A 202 43.025 25.115 38.441 1.00 35.98 C HETATM 1389 C MSE A 202 42.365 26.328 39.072 1.00 35.79 C HETATM 1390 O MSE A 202 42.782 27.450 38.797 1.00 37.66 O HETATM 1391 CB MSE A 202 42.193 24.591 37.264 1.00 36.98 C HETATM 1392 CG MSE A 202 42.909 23.554 36.473 1.00 38.41 C HETATM 1393 SE MSE A 202 44.432 24.336 35.495 1.00 50.60 SE HETATM 1394 CE MSE A 202 43.624 25.755 34.377 1.00 47.65 C HETATM 1586 N MSE A 227 36.202 25.849 37.153 1.00 30.21 N HETATM 1587 CA MSE A 227 36.132 24.514 36.584 1.00 29.21 C HETATM 1588 C MSE A 227 35.299 23.616 37.502 1.00 32.38 C HETATM 1589 O MSE A 227 35.433 23.660 38.725 1.00 31.29 O HETATM 1590 CB MSE A 227 37.529 23.965 36.350 1.00 33.51 C HETATM 1591 CG MSE A 227 37.504 22.670 35.672 1.00 35.65 C HETATM 1592 SE MSE A 227 39.302 22.060 35.390 1.00 45.54 SE HETATM 1593 CE MSE A 227 40.017 23.422 34.170 1.00 41.60 C HETATM 1930 N MSE A 269 45.998 24.106 25.361 1.00 29.13 N HETATM 1931 CA MSE A 269 44.864 24.998 25.162 1.00 30.27 C HETATM 1932 C MSE A 269 45.239 26.429 25.520 1.00 29.55 C HETATM 1933 O MSE A 269 44.894 27.355 24.782 1.00 29.35 O HETATM 1934 CB MSE A 269 43.662 24.522 25.990 1.00 29.24 C HETATM 1935 CG MSE A 269 43.087 23.287 25.399 1.00 33.60 C HETATM 1936 SE MSE A 269 41.943 22.461 26.689 1.00 44.73 SE HETATM 1937 CE MSE A 269 40.366 23.345 26.005 1.00 33.41 C TER 2063 GLN A 284 HETATM 2064 NI NI A 401 6.276 10.177 57.010 1.00 28.45 NI HETATM 2065 NI NI A 402 49.872 24.604 39.075 1.00 53.59 NI HETATM 2066 O HOH A 501 50.157 25.710 40.721 1.00 53.12 O HETATM 2067 O HOH A 502 47.228 15.898 34.742 1.00 45.06 O HETATM 2068 O HOH A 503 34.507 13.180 40.822 1.00 48.36 O HETATM 2069 O HOH A 504 26.498 -5.305 41.907 1.00 42.10 O HETATM 2070 O HOH A 505 -1.117 -2.993 53.307 1.00 37.89 O HETATM 2071 O HOH A 506 20.084 8.790 25.176 1.00 49.26 O HETATM 2072 O HOH A 507 11.610 -6.160 44.404 1.00 47.08 O HETATM 2073 O HOH A 508 47.530 31.525 12.321 1.00 30.20 O HETATM 2074 O HOH A 509 24.217 5.690 53.127 1.00 47.83 O HETATM 2075 O HOH A 510 16.867 0.672 26.521 1.00 40.34 O HETATM 2076 O HOH A 511 51.058 20.947 26.645 1.00 45.29 O HETATM 2077 O HOH A 512 -0.690 5.666 46.968 1.00 52.49 O HETATM 2078 O HOH A 513 7.137 6.083 53.779 1.00 29.82 O HETATM 2079 O HOH A 514 12.253 12.165 54.737 1.00 34.59 O HETATM 2080 O HOH A 515 5.387 5.211 52.073 1.00 31.35 O HETATM 2081 O HOH A 516 57.007 35.177 20.695 1.00 38.94 O HETATM 2082 O HOH A 517 15.759 10.000 56.617 1.00 43.97 O HETATM 2083 O HOH A 518 19.031 -3.624 27.008 1.00 36.27 O HETATM 2084 O HOH A 519 31.457 14.177 32.431 1.00 43.33 O HETATM 2085 O HOH A 520 16.153 -3.271 32.719 1.00 30.72 O HETATM 2086 O HOH A 521 45.994 29.429 18.383 1.00 46.79 O HETATM 2087 O HOH A 522 31.986 10.990 22.774 1.00 51.67 O HETATM 2088 O HOH A 523 38.507 32.468 36.165 1.00 33.96 O HETATM 2089 O HOH A 524 14.633 -4.603 50.768 1.00 38.91 O HETATM 2090 O HOH A 525 33.538 25.203 23.760 1.00 26.28 O HETATM 2091 O HOH A 526 37.760 23.779 23.466 1.00 32.53 O HETATM 2092 O HOH A 527 25.873 0.432 27.291 1.00 32.27 O HETATM 2093 O HOH A 528 24.169 -5.025 41.447 1.00 45.85 O HETATM 2094 O HOH A 529 10.490 1.582 48.959 1.00 28.48 O HETATM 2095 O HOH A 530 37.941 16.327 23.177 1.00 34.98 O HETATM 2096 O HOH A 531 39.479 28.242 37.071 1.00 40.31 O HETATM 2097 O HOH A 532 9.085 1.515 56.882 1.00 49.84 O HETATM 2098 O HOH A 533 15.997 -4.339 39.907 1.00 40.96 O HETATM 2099 O HOH A 534 27.681 4.227 37.864 1.00 30.20 O HETATM 2100 O HOH A 535 36.866 7.886 37.035 1.00 35.64 O HETATM 2101 O HOH A 536 5.717 -2.061 54.288 1.00 41.31 O HETATM 2102 O HOH A 537 32.740 37.258 20.280 1.00 31.97 O HETATM 2103 O HOH A 538 25.152 -4.451 56.193 1.00 44.12 O HETATM 2104 O HOH A 539 40.608 8.184 29.006 1.00 47.06 O HETATM 2105 O HOH A 540 18.196 9.521 55.314 1.00 38.60 O HETATM 2106 O HOH A 541 7.636 5.062 56.407 1.00 39.75 O HETATM 2107 O HOH A 542 4.776 -2.107 49.480 1.00 52.86 O HETATM 2108 O HOH A 543 48.948 24.849 21.523 1.00 39.46 O HETATM 2109 O HOH A 544 33.267 14.218 35.051 1.00 40.35 O HETATM 2110 O HOH A 545 28.100 41.077 24.344 1.00 32.95 O HETATM 2111 O HOH A 546 42.674 39.021 13.377 1.00 47.95 O HETATM 2112 O HOH A 547 7.961 0.194 47.481 1.00 30.24 O HETATM 2113 O HOH A 548 23.983 -1.469 38.446 1.00 32.00 O HETATM 2114 O HOH A 549 38.259 36.838 29.386 1.00 43.59 O HETATM 2115 O HOH A 550 30.870 1.954 39.205 1.00 31.89 O HETATM 2116 O HOH A 551 12.386 7.843 51.266 1.00 26.88 O HETATM 2117 O HOH A 552 31.019 14.737 28.913 1.00 31.50 O HETATM 2118 O HOH A 553 34.751 22.288 41.051 1.00 40.24 O HETATM 2119 O HOH A 554 36.883 13.765 41.809 1.00 36.49 O HETATM 2120 O HOH A 555 32.857 31.976 37.323 1.00 36.32 O HETATM 2121 O HOH A 556 28.977 6.593 43.868 1.00 29.33 O HETATM 2122 O HOH A 557 20.314 5.571 57.401 1.00 49.86 O HETATM 2123 O HOH A 558 12.519 8.679 30.166 1.00 43.82 O HETATM 2124 O HOH A 559 13.728 9.681 44.059 1.00 28.44 O HETATM 2125 O HOH A 560 31.193 29.332 20.757 1.00 36.91 O HETATM 2126 O HOH A 561 34.455 19.148 20.226 1.00 37.13 O HETATM 2127 O HOH A 562 15.066 10.135 60.858 1.00 46.64 O HETATM 2128 O HOH A 563 25.415 32.916 16.379 1.00 49.13 O HETATM 2129 O HOH A 564 30.075 14.525 21.709 1.00 45.59 O HETATM 2130 O HOH A 565 31.173 26.864 22.342 1.00 31.42 O HETATM 2131 O HOH A 566 16.094 12.899 54.731 1.00 41.94 O HETATM 2132 O HOH A 567 22.432 14.453 44.080 1.00 37.19 O HETATM 2133 O HOH A 568 20.934 19.172 38.289 1.00 47.11 O HETATM 2134 O HOH A 569 42.480 33.418 22.324 1.00 36.60 O HETATM 2135 O HOH A 570 50.131 23.625 37.362 1.00 38.62 O HETATM 2136 O HOH A 571 19.698 0.164 61.969 1.00 50.89 O HETATM 2137 O HOH A 572 34.305 29.832 19.496 1.00 44.68 O HETATM 2138 O HOH A 573 13.570 11.046 31.280 1.00 40.26 O HETATM 2139 O HOH A 574 -1.240 3.723 57.149 1.00 36.76 O HETATM 2140 O HOH A 575 11.173 -1.220 56.100 1.00 43.51 O HETATM 2141 O HOH A 576 33.167 1.180 34.703 1.00 39.42 O HETATM 2142 O HOH A 577 15.476 12.175 35.744 1.00 39.46 O HETATM 2143 O HOH A 578 24.593 6.513 25.043 1.00 32.95 O HETATM 2144 O HOH A 579 22.134 7.891 54.217 1.00 33.19 O HETATM 2145 O HOH A 580 32.051 -3.049 43.978 1.00 48.40 O HETATM 2146 O HOH A 581 23.869 29.105 18.096 1.00 45.95 O HETATM 2147 O HOH A 582 17.713 7.123 25.594 1.00 45.01 O HETATM 2148 O HOH A 583 8.498 -2.618 47.502 1.00 30.52 O HETATM 2149 O HOH A 584 37.481 23.632 42.997 1.00 46.63 O HETATM 2150 O HOH A 585 30.633 2.263 27.600 1.00 40.58 O HETATM 2151 O HOH A 586 43.965 31.729 40.422 1.00 41.54 O HETATM 2152 O HOH A 587 5.805 3.233 57.436 1.00 45.42 O HETATM 2153 O HOH A 588 51.716 25.822 39.168 1.00 56.96 O HETATM 2154 O HOH A 589 51.377 22.766 39.451 1.00 49.45 O HETATM 2155 O HOH A 590 10.957 11.517 26.187 1.00 42.50 O HETATM 2156 O HOH A 591 16.427 27.975 46.113 1.00 57.82 O HETATM 2157 O HOH A 592 25.280 -1.639 25.580 1.00 45.08 O HETATM 2158 O HOH A 593 33.321 1.216 37.761 1.00 46.17 O HETATM 2159 O HOH A 594 36.795 5.634 38.175 1.00 46.34 O HETATM 2160 O HOH A 595 41.762 39.738 38.964 1.00 49.69 O HETATM 2161 O HOH A 596 23.771 1.555 25.524 1.00 47.30 O HETATM 2162 O HOH A 597 8.949 -6.248 45.608 1.00 39.19 O CONECT 256 258 CONECT 258 256 259 CONECT 259 258 260 262 CONECT 260 259 261 266 CONECT 261 260 CONECT 262 259 263 CONECT 263 262 264 CONECT 264 263 265 CONECT 265 264 CONECT 266 260 CONECT 331 2064 CONECT 531 2064 CONECT 1017 1026 CONECT 1026 1017 1027 CONECT 1027 1026 1028 1030 CONECT 1028 1027 1029 1034 CONECT 1029 1028 CONECT 1030 1027 1031 CONECT 1031 1030 1032 CONECT 1032 1031 1033 CONECT 1033 1032 CONECT 1034 1028 CONECT 1379 1387 CONECT 1386 2065 CONECT 1387 1379 1388 CONECT 1388 1387 1389 1391 CONECT 1389 1388 1390 1395 CONECT 1390 1389 CONECT 1391 1388 1392 CONECT 1392 1391 1393 CONECT 1393 1392 1394 CONECT 1394 1393 CONECT 1395 1389 CONECT 1431 2065 CONECT 1576 1586 CONECT 1586 1576 1587 CONECT 1587 1586 1588 1590 CONECT 1588 1587 1589 1594 CONECT 1589 1588 CONECT 1590 1587 1591 CONECT 1591 1590 1592 CONECT 1592 1591 1593 CONECT 1593 1592 CONECT 1594 1588 CONECT 1923 1930 CONECT 1930 1923 1931 CONECT 1931 1930 1932 1934 CONECT 1932 1931 1933 1938 CONECT 1933 1932 CONECT 1934 1931 1935 CONECT 1935 1934 1936 CONECT 1936 1935 1937 CONECT 1937 1936 CONECT 1938 1932 CONECT 2064 331 531 CONECT 2065 1386 1431 2066 2135 CONECT 2065 2153 2154 CONECT 2066 2065 CONECT 2135 2065 CONECT 2153 2065 CONECT 2154 2065 MASTER 344 0 7 10 16 0 0 6 2161 1 61 23 END