HEADER RNA BINDING PROTEIN 16-MAY-24 9BU5 TITLE CC PROXP-ALA APO SOLUTION STRUCTURE COMPND MOL_ID: 1; COMPND 2 MOLECULE: DNA-BINDING PROTEIN, PUTATIVE; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CAULOBACTER VIBRIOIDES; SOURCE 3 ORGANISM_TAXID: 155892; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 6 EXPRESSION_SYSTEM_VECTOR_TYPE: PET15B KEYWDS RNA BINDING PROTEIN EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR A.D.DURAN,M.P.FOSTER REVDAT 3 13-NOV-24 9BU5 1 JRNL REVDAT 2 06-NOV-24 9BU5 1 JRNL REVDAT 1 16-OCT-24 9BU5 0 JRNL AUTH A.D.DURAN,E.M.DANHART,X.MA,A.B.K.NAGY,K.MUSIER-FORSYTH, JRNL AUTH 2 M.P.FOSTER JRNL TITL NMR-BASED SOLUTION STRUCTURE OF THE CAULOBACTER CRESCENTUS JRNL TITL 2 PROXP-ALA TRANS-EDITING ENZYME. JRNL REF BIOMOL.NMR ASSIGN. V. 18 233 2024 JRNL REFN ESSN 1874-270X JRNL PMID 39214936 JRNL DOI 10.1007/S12104-024-10193-3 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH A.D.DURAN,E.M.DANHART,X.MA,A.B.K.NAGY,K.MUSIER-FORSYTH, REMARK 1 AUTH 2 M.P.FOSTER REMARK 1 TITL NMR-BASED SOLUTION STRUCTURE OF THE CAULOBACTER CRESCENTUS REMARK 1 TITL 2 PROXP-ALA TRANS-EDITING ENZYME. REMARK 1 REF BIOMOL NMR ASSIGN 2024 REMARK 1 REFN ESSN 1874-270X REMARK 1 PMID 39214936 REMARK 1 DOI 10.1016/J.CELL.2009.01.036 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CYANA REMARK 3 AUTHORS : GUNTERT, MUMENTHALER AND WUTHRICH REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 9BU5 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 20-MAY-24. REMARK 100 THE DEPOSITION ID IS D_1000281522. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 7.5 REMARK 210 IONIC STRENGTH : 50 MM SODIUM PHOSPHATE, 10 MM REMARK 210 SODIUM CHLORIDE REMARK 210 PRESSURE : 1 BAR REMARK 210 SAMPLE CONTENTS : 0.680 MM [U-13C; U-15N] PROXP REMARK 210 -ALA, 0.001 % W/V DSS, 50 MM REMARK 210 SODIUM PHOSPHATE, 10 MM SODIUM REMARK 210 CHLORIDE, 90% H2O/10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : HNCO; HNCA; HNCOCA; HNCACB; REMARK 210 CBCA(CO)NH; HCCH-TOCSY; CCCH- REMARK 210 TOCSY; 15N-NOESY; 13C-NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ; 800 MHZ REMARK 210 SPECTROMETER MODEL : DRX REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NMRVIEW, NMRPIPE REMARK 210 METHOD USED : SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 150 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 VAL A 16 153.07 -47.71 REMARK 500 1 PRO A 25 -168.85 -69.83 REMARK 500 1 VAL A 29 102.63 -52.15 REMARK 500 1 SER A 78 -169.39 -103.04 REMARK 500 1 VAL A 113 112.72 70.68 REMARK 500 1 SER A 124 70.74 73.70 REMARK 500 1 VAL A 127 17.61 -150.63 REMARK 500 1 HIS A 130 71.85 -113.18 REMARK 500 1 PRO A 131 -164.93 -69.68 REMARK 500 1 LYS A 133 43.49 -86.61 REMARK 500 2 HIS A 0 -50.20 -124.78 REMARK 500 2 VAL A 16 152.53 -47.41 REMARK 500 2 ASP A 22 48.07 -89.13 REMARK 500 2 PRO A 25 -169.79 -69.81 REMARK 500 2 VAL A 29 102.73 -52.69 REMARK 500 2 HIS A 43 49.43 -70.98 REMARK 500 2 PHE A 83 103.58 -50.38 REMARK 500 2 PRO A 97 72.50 -69.79 REMARK 500 2 SER A 99 70.61 58.84 REMARK 500 2 VAL A 113 114.96 68.50 REMARK 500 2 SER A 124 72.00 74.01 REMARK 500 2 VAL A 127 21.92 -151.33 REMARK 500 2 HIS A 130 74.01 -112.93 REMARK 500 2 PRO A 131 -165.68 -69.78 REMARK 500 2 LYS A 133 43.73 -88.03 REMARK 500 3 ASP A 22 35.38 -93.31 REMARK 500 3 PRO A 25 -169.78 -69.79 REMARK 500 3 VAL A 29 102.81 -52.00 REMARK 500 3 HIS A 43 49.88 -71.14 REMARK 500 3 PHE A 83 101.22 -52.53 REMARK 500 3 PRO A 97 99.55 -69.70 REMARK 500 3 SER A 99 72.24 63.37 REMARK 500 3 VAL A 113 112.78 70.44 REMARK 500 3 SER A 124 71.36 73.75 REMARK 500 3 VAL A 127 18.42 -151.00 REMARK 500 3 HIS A 130 73.90 -112.58 REMARK 500 3 PRO A 131 -165.56 -69.73 REMARK 500 3 LYS A 133 44.18 -86.97 REMARK 500 4 VAL A 16 152.41 -47.94 REMARK 500 4 ASP A 22 37.30 -91.41 REMARK 500 4 PRO A 25 -168.50 -69.73 REMARK 500 4 VAL A 29 102.81 -52.12 REMARK 500 4 SER A 78 -168.29 -106.69 REMARK 500 4 PHE A 83 105.61 -51.25 REMARK 500 4 VAL A 113 116.15 68.10 REMARK 500 4 ASP A 123 22.03 -79.38 REMARK 500 4 SER A 124 72.59 72.26 REMARK 500 4 VAL A 127 19.85 -151.34 REMARK 500 4 HIS A 130 74.86 -112.95 REMARK 500 4 PRO A 131 -165.97 -69.71 REMARK 500 REMARK 500 THIS ENTRY HAS 272 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 27185 RELATED DB: BMRB DBREF 9BU5 A 1 168 UNP Q9ABV9 Q9ABV9_CAUVC 1 168 SEQADV 9BU5 GLY A -2 UNP Q9ABV9 EXPRESSION TAG SEQADV 9BU5 SER A -1 UNP Q9ABV9 EXPRESSION TAG SEQADV 9BU5 HIS A 0 UNP Q9ABV9 EXPRESSION TAG SEQRES 1 A 171 GLY SER HIS MET LYS THR ARG ALA ASP LEU PHE ALA PHE SEQRES 2 A 171 PHE ASP ALA HIS GLY VAL ASP HIS LYS THR LEU ASP HIS SEQRES 3 A 171 PRO PRO VAL PHE ARG VAL GLU GLU GLY LEU GLU ILE LYS SEQRES 4 A 171 ALA ALA MET PRO GLY GLY HIS THR LYS ASN LEU PHE LEU SEQRES 5 A 171 LYS ASP ALA LYS GLY GLN LEU TRP LEU ILE SER ALA LEU SEQRES 6 A 171 GLY GLU THR THR ILE ASP LEU LYS LYS LEU HIS HIS VAL SEQRES 7 A 171 ILE GLY SER GLY ARG LEU SER PHE GLY PRO GLN GLU MET SEQRES 8 A 171 MET LEU GLU THR LEU GLY VAL THR PRO GLY SER VAL THR SEQRES 9 A 171 ALA PHE GLY LEU ILE ASN ASP THR GLU LYS ARG VAL ARG SEQRES 10 A 171 PHE VAL LEU ASP LYS ALA LEU ALA ASP SER ASP PRO VAL SEQRES 11 A 171 ASN PHE HIS PRO LEU LYS ASN ASP ALA THR THR ALA VAL SEQRES 12 A 171 SER GLN ALA GLY LEU ARG ARG PHE LEU ALA ALA LEU GLY SEQRES 13 A 171 VAL GLU PRO MET ILE VAL ASP PHE ALA ALA MET GLU VAL SEQRES 14 A 171 VAL GLY HELIX 1 AA1 THR A 3 HIS A 14 1 12 HELIX 2 AA2 GLY A 32 ALA A 37 1 6 HELIX 3 AA3 ASP A 68 VAL A 75 1 8 HELIX 4 AA4 PRO A 85 THR A 92 1 8 HELIX 5 AA5 PHE A 103 ASP A 108 1 6 HELIX 6 AA6 ALA A 143 GLY A 153 1 11 SHEET 1 AA1 2 LYS A 19 LEU A 21 0 SHEET 2 AA1 2 THR A 137 ALA A 139 -1 O THR A 137 N LEU A 21 SHEET 1 AA2 5 SER A 82 PHE A 83 0 SHEET 2 AA2 5 LYS A 45 LYS A 50 -1 N LYS A 50 O SER A 82 SHEET 3 AA2 5 LEU A 56 ALA A 61 -1 O TRP A 57 N LEU A 49 SHEET 4 AA2 5 ARG A 114 ASP A 118 1 O VAL A 116 N LEU A 58 SHEET 5 AA2 5 MET A 157 VAL A 159 1 O MET A 157 N LEU A 117 CISPEP 1 ASP A 125 PRO A 126 1 0.00 CISPEP 2 ASP A 125 PRO A 126 2 0.02 CISPEP 3 ASP A 125 PRO A 126 3 -0.01 CISPEP 4 ASP A 125 PRO A 126 4 0.01 CISPEP 5 ASP A 125 PRO A 126 5 0.00 CISPEP 6 ASP A 125 PRO A 126 6 0.04 CISPEP 7 ASP A 125 PRO A 126 7 -0.01 CISPEP 8 ASP A 125 PRO A 126 8 0.08 CISPEP 9 ASP A 125 PRO A 126 9 0.03 CISPEP 10 ASP A 125 PRO A 126 10 -0.06 CISPEP 11 ASP A 125 PRO A 126 11 0.11 CISPEP 12 ASP A 125 PRO A 126 12 0.01 CISPEP 13 ASP A 125 PRO A 126 13 0.03 CISPEP 14 ASP A 125 PRO A 126 14 -0.02 CISPEP 15 ASP A 125 PRO A 126 15 0.03 CISPEP 16 ASP A 125 PRO A 126 16 0.00 CISPEP 17 ASP A 125 PRO A 126 17 -0.02 CISPEP 18 ASP A 125 PRO A 126 18 -0.01 CISPEP 19 ASP A 125 PRO A 126 19 0.09 CISPEP 20 ASP A 125 PRO A 126 20 -0.04 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1 TER 2622 GLY A 168 ENDMDL MODEL 2 TER 2622 GLY A 168 ENDMDL MODEL 3 TER 2622 GLY A 168 ENDMDL MODEL 4 TER 2622 GLY A 168 ENDMDL MODEL 5 TER 2622 GLY A 168 ENDMDL MODEL 6 TER 2622 GLY A 168 ENDMDL MODEL 7 TER 2622 GLY A 168 ENDMDL MODEL 8 TER 2622 GLY A 168 ENDMDL MODEL 9 TER 2622 GLY A 168 ENDMDL MODEL 10 TER 2622 GLY A 168 ENDMDL MODEL 11 TER 2622 GLY A 168 ENDMDL MODEL 12 TER 2622 GLY A 168 ENDMDL MODEL 13 TER 2622 GLY A 168 ENDMDL MODEL 14 TER 2622 GLY A 168 ENDMDL MODEL 15 TER 2622 GLY A 168 ENDMDL MODEL 16 TER 2622 GLY A 168 ENDMDL MODEL 17 TER 2622 GLY A 168 ENDMDL MODEL 18 TER 2622 GLY A 168 ENDMDL MODEL 19 TER 2622 GLY A 168 ENDMDL MODEL 20 TER 2622 GLY A 168 ENDMDL MASTER 154 0 0 6 7 0 0 6 1305 1 0 14 END