HEADER HYDROLASE 28-MAY-24 9C1B TITLE CRYSTAL STRUCTURE OF GDP-BOUND HUMAN M-RAS PROTEIN IN CRYSTAL FORM II COMPND MOL_ID: 1; COMPND 2 MOLECULE: RAS-RELATED PROTEIN M-RAS; COMPND 3 CHAIN: A, B, C, D; COMPND 4 SYNONYM: RAS-RELATED PROTEIN R-RAS3; COMPND 5 EC: 3.6.5.2; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: MRAS, RRAS3; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS M-RAS, GDP, GTPASE STRUCTURE, RAS, CRYSTAL PACKING, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR S.M.BESTER,R.ABRAHAMSEN,L.R.SAMORA,W.-I.WU,T.-C.MOU REVDAT 2 18-SEP-24 9C1B 1 JRNL REVDAT 1 11-SEP-24 9C1B 0 JRNL AUTH S.M.BESTER,R.ABRAHAMSEN,L.RODRIGUES SAMORA,W.I.WU,T.C.MOU JRNL TITL CRYSTAL STRUCTURE OF THE GDP-BOUND HUMAN M-RAS PROTEIN IN JRNL TITL 2 TWO CRYSTAL FORMS. JRNL REF ACTA CRYSTALLOGR.,SECT.F V. 80 220 2024 JRNL REFN ESSN 2053-230X JRNL PMID 39196705 JRNL DOI 10.1107/S2053230X24007969 REMARK 2 REMARK 2 RESOLUTION. 2.27 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.19.1_4122 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.27 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 41.94 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.980 REMARK 3 COMPLETENESS FOR RANGE (%) : 91.3 REMARK 3 NUMBER OF REFLECTIONS : 32137 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.202 REMARK 3 R VALUE (WORKING SET) : 0.199 REMARK 3 FREE R VALUE : 0.247 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 6.200 REMARK 3 FREE R VALUE TEST SET COUNT : 1991 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 41.9400 - 5.4600 0.98 2312 152 0.1884 0.2198 REMARK 3 2 5.4600 - 4.3400 0.98 2302 150 0.1575 0.1781 REMARK 3 3 4.3400 - 3.7900 0.97 2296 147 0.1615 0.2108 REMARK 3 4 3.7900 - 3.4400 0.87 2054 146 0.1803 0.2327 REMARK 3 5 3.4400 - 3.2000 0.97 2296 143 0.2002 0.2645 REMARK 3 6 3.2000 - 3.0100 0.98 2311 154 0.2054 0.2750 REMARK 3 7 3.0100 - 2.8600 0.97 2295 154 0.2173 0.2516 REMARK 3 8 2.8600 - 2.7300 0.97 2301 149 0.2368 0.2979 REMARK 3 9 2.7300 - 2.6900 0.90 785 53 0.2509 0.3168 REMARK 3 10 2.6200 - 2.5400 0.97 2076 143 0.2501 0.2903 REMARK 3 11 2.5400 - 2.4600 0.97 2296 151 0.2540 0.3264 REMARK 3 12 2.4600 - 2.3900 0.97 2279 149 0.2421 0.2967 REMARK 3 13 2.3900 - 2.3300 0.97 2266 143 0.2516 0.2797 REMARK 3 14 2.3300 - 2.2700 0.96 2277 157 0.2724 0.3240 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.272 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 28.942 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 29.22 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 38.65 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.002 5693 REMARK 3 ANGLE : 0.527 7697 REMARK 3 CHIRALITY : 0.043 853 REMARK 3 PLANARITY : 0.004 963 REMARK 3 DIHEDRAL : 14.100 791 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 9C1B COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 29-MAY-24. REMARK 100 THE DEPOSITION ID IS D_1000284537. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 14-NOV-21 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 17-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : AUTOPROC REMARK 200 DATA SCALING SOFTWARE : AUTOPROC REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 32348 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.270 REMARK 200 RESOLUTION RANGE LOW (A) : 41.940 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 91.3 REMARK 200 DATA REDUNDANCY : 2.700 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 11.8100 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.27 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.35 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.710 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 36.50 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.94 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20% PEG3350, VAPOR DIFFUSION, HANGING REMARK 280 DROP, TEMPERATURE 295K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -14 REMARK 465 GLY A -13 REMARK 465 HIS A -12 REMARK 465 HIS A -11 REMARK 465 HIS A -10 REMARK 465 HIS A -9 REMARK 465 HIS A -8 REMARK 465 HIS A -7 REMARK 465 GLU A -6 REMARK 465 ASN A -5 REMARK 465 LEU A -4 REMARK 465 TYR A -3 REMARK 465 PHE A -2 REMARK 465 GLN A -1 REMARK 465 GLY A 0 REMARK 465 MET A 1 REMARK 465 ALA A 2 REMARK 465 THR A 3 REMARK 465 SER A 4 REMARK 465 ALA A 5 REMARK 465 VAL A 6 REMARK 465 PRO A 7 REMARK 465 SER A 8 REMARK 465 ASP A 9 REMARK 465 GLN A 71 REMARK 465 GLU A 72 REMARK 465 ILE A 179 REMARK 465 PRO A 180 REMARK 465 GLU A 181 REMARK 465 LYS A 182 REMARK 465 SER A 183 REMARK 465 GLN A 184 REMARK 465 LYS A 185 REMARK 465 LYS A 186 REMARK 465 LYS A 187 REMARK 465 LYS A 188 REMARK 465 LYS A 189 REMARK 465 THR A 190 REMARK 465 LYS A 191 REMARK 465 TRP A 192 REMARK 465 ARG A 193 REMARK 465 GLY A 194 REMARK 465 ASP A 195 REMARK 465 ARG A 196 REMARK 465 ALA A 197 REMARK 465 THR A 198 REMARK 465 GLY A 199 REMARK 465 THR A 200 REMARK 465 HIS A 201 REMARK 465 LYS A 202 REMARK 465 LEU A 203 REMARK 465 GLN A 204 REMARK 465 MET B -14 REMARK 465 GLY B -13 REMARK 465 HIS B -12 REMARK 465 HIS B -11 REMARK 465 HIS B -10 REMARK 465 HIS B -9 REMARK 465 HIS B -8 REMARK 465 HIS B -7 REMARK 465 GLU B -6 REMARK 465 ASN B -5 REMARK 465 LEU B -4 REMARK 465 TYR B -3 REMARK 465 PHE B -2 REMARK 465 GLN B -1 REMARK 465 GLY B 0 REMARK 465 MET B 1 REMARK 465 ALA B 2 REMARK 465 THR B 3 REMARK 465 SER B 4 REMARK 465 ALA B 5 REMARK 465 VAL B 6 REMARK 465 PRO B 7 REMARK 465 SER B 8 REMARK 465 ASP B 9 REMARK 465 ILE B 179 REMARK 465 PRO B 180 REMARK 465 GLU B 181 REMARK 465 LYS B 182 REMARK 465 SER B 183 REMARK 465 GLN B 184 REMARK 465 LYS B 185 REMARK 465 LYS B 186 REMARK 465 LYS B 187 REMARK 465 LYS B 188 REMARK 465 LYS B 189 REMARK 465 THR B 190 REMARK 465 LYS B 191 REMARK 465 TRP B 192 REMARK 465 ARG B 193 REMARK 465 GLY B 194 REMARK 465 ASP B 195 REMARK 465 ARG B 196 REMARK 465 ALA B 197 REMARK 465 THR B 198 REMARK 465 GLY B 199 REMARK 465 THR B 200 REMARK 465 HIS B 201 REMARK 465 LYS B 202 REMARK 465 LEU B 203 REMARK 465 GLN B 204 REMARK 465 MET C -14 REMARK 465 GLY C -13 REMARK 465 HIS C -12 REMARK 465 HIS C -11 REMARK 465 HIS C -10 REMARK 465 HIS C -9 REMARK 465 HIS C -8 REMARK 465 HIS C -7 REMARK 465 GLU C -6 REMARK 465 ASN C -5 REMARK 465 LEU C -4 REMARK 465 TYR C -3 REMARK 465 PHE C -2 REMARK 465 GLN C -1 REMARK 465 GLY C 0 REMARK 465 MET C 1 REMARK 465 ALA C 2 REMARK 465 THR C 3 REMARK 465 SER C 4 REMARK 465 ALA C 5 REMARK 465 VAL C 6 REMARK 465 PRO C 7 REMARK 465 SER C 8 REMARK 465 ASP C 9 REMARK 465 ASN C 10 REMARK 465 GLN C 71 REMARK 465 GLU C 72 REMARK 465 GLU C 73 REMARK 465 ILE C 179 REMARK 465 PRO C 180 REMARK 465 GLU C 181 REMARK 465 LYS C 182 REMARK 465 SER C 183 REMARK 465 GLN C 184 REMARK 465 LYS C 185 REMARK 465 LYS C 186 REMARK 465 LYS C 187 REMARK 465 LYS C 188 REMARK 465 LYS C 189 REMARK 465 THR C 190 REMARK 465 LYS C 191 REMARK 465 TRP C 192 REMARK 465 ARG C 193 REMARK 465 GLY C 194 REMARK 465 ASP C 195 REMARK 465 ARG C 196 REMARK 465 ALA C 197 REMARK 465 THR C 198 REMARK 465 GLY C 199 REMARK 465 THR C 200 REMARK 465 HIS C 201 REMARK 465 LYS C 202 REMARK 465 LEU C 203 REMARK 465 GLN C 204 REMARK 465 MET D -14 REMARK 465 GLY D -13 REMARK 465 HIS D -12 REMARK 465 HIS D -11 REMARK 465 HIS D -10 REMARK 465 HIS D -9 REMARK 465 HIS D -8 REMARK 465 HIS D -7 REMARK 465 GLU D -6 REMARK 465 ASN D -5 REMARK 465 LEU D -4 REMARK 465 TYR D -3 REMARK 465 PHE D -2 REMARK 465 GLN D -1 REMARK 465 GLY D 0 REMARK 465 MET D 1 REMARK 465 ALA D 2 REMARK 465 THR D 3 REMARK 465 SER D 4 REMARK 465 ALA D 5 REMARK 465 VAL D 6 REMARK 465 PRO D 7 REMARK 465 SER D 8 REMARK 465 ASP D 9 REMARK 465 GLN D 71 REMARK 465 GLU D 72 REMARK 465 GLU D 73 REMARK 465 ILE D 179 REMARK 465 PRO D 180 REMARK 465 GLU D 181 REMARK 465 LYS D 182 REMARK 465 SER D 183 REMARK 465 GLN D 184 REMARK 465 LYS D 185 REMARK 465 LYS D 186 REMARK 465 LYS D 187 REMARK 465 LYS D 188 REMARK 465 LYS D 189 REMARK 465 THR D 190 REMARK 465 LYS D 191 REMARK 465 TRP D 192 REMARK 465 ARG D 193 REMARK 465 GLY D 194 REMARK 465 ASP D 195 REMARK 465 ARG D 196 REMARK 465 ALA D 197 REMARK 465 THR D 198 REMARK 465 GLY D 199 REMARK 465 THR D 200 REMARK 465 HIS D 201 REMARK 465 LYS D 202 REMARK 465 LEU D 203 REMARK 465 GLN D 204 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 VAL A 113 CG1 CG2 REMARK 470 VAL D 113 CG1 CG2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU B 73 -148.38 62.39 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 301 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER A 27 OG REMARK 620 2 GDP A 302 O2B 98.5 REMARK 620 3 HOH A 404 O 103.4 92.4 REMARK 620 4 HOH A 415 O 154.6 98.8 94.3 REMARK 620 5 HOH A 416 O 83.5 89.0 172.6 78.3 REMARK 620 6 HOH A 430 O 85.0 175.4 83.9 78.9 94.4 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 301 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER B 27 OG REMARK 620 2 GDP B 302 O2B 98.9 REMARK 620 3 HOH B 404 O 97.4 104.9 REMARK 620 4 HOH B 411 O 90.1 87.3 164.5 REMARK 620 5 HOH B 412 O 162.6 97.7 83.2 85.6 REMARK 620 6 HOH B 426 O 78.4 161.2 93.9 74.2 84.1 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG C 301 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER C 27 OG REMARK 620 2 GDP C 302 O2B 85.0 REMARK 620 3 HOH C 404 O 87.8 83.8 REMARK 620 4 HOH C 405 O 89.6 85.4 169.1 REMARK 620 5 HOH C 418 O 173.3 95.3 98.9 83.8 REMARK 620 6 HOH C 427 O 83.6 163.6 84.0 106.2 97.4 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG D 301 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER D 27 OG REMARK 620 2 GDP D 302 O2B 90.7 REMARK 620 3 HOH D 405 O 99.9 90.6 REMARK 620 4 HOH D 411 O 154.9 105.6 98.9 REMARK 620 5 HOH D 413 O 83.2 88.2 176.8 78.6 REMARK 620 6 HOH D 431 O 79.5 169.2 86.5 85.2 95.2 REMARK 620 N 1 2 3 4 5 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 9C1A RELATED DB: PDB REMARK 900 SAME PROTEIN DIFFERENT CRYSTAL FORM DBREF 9C1B A 1 204 UNP O14807 RASM_HUMAN 1 204 DBREF 9C1B B 1 204 UNP O14807 RASM_HUMAN 1 204 DBREF 9C1B C 1 204 UNP O14807 RASM_HUMAN 1 204 DBREF 9C1B D 1 204 UNP O14807 RASM_HUMAN 1 204 SEQADV 9C1B MET A -14 UNP O14807 INITIATING METHIONINE SEQADV 9C1B GLY A -13 UNP O14807 EXPRESSION TAG SEQADV 9C1B HIS A -12 UNP O14807 EXPRESSION TAG SEQADV 9C1B HIS A -11 UNP O14807 EXPRESSION TAG SEQADV 9C1B HIS A -10 UNP O14807 EXPRESSION TAG SEQADV 9C1B HIS A -9 UNP O14807 EXPRESSION TAG SEQADV 9C1B HIS A -8 UNP O14807 EXPRESSION TAG SEQADV 9C1B HIS A -7 UNP O14807 EXPRESSION TAG SEQADV 9C1B GLU A -6 UNP O14807 EXPRESSION TAG SEQADV 9C1B ASN A -5 UNP O14807 EXPRESSION TAG SEQADV 9C1B LEU A -4 UNP O14807 EXPRESSION TAG SEQADV 9C1B TYR A -3 UNP O14807 EXPRESSION TAG SEQADV 9C1B PHE A -2 UNP O14807 EXPRESSION TAG SEQADV 9C1B GLN A -1 UNP O14807 EXPRESSION TAG SEQADV 9C1B GLY A 0 UNP O14807 EXPRESSION TAG SEQADV 9C1B MET B -14 UNP O14807 INITIATING METHIONINE SEQADV 9C1B GLY B -13 UNP O14807 EXPRESSION TAG SEQADV 9C1B HIS B -12 UNP O14807 EXPRESSION TAG SEQADV 9C1B HIS B -11 UNP O14807 EXPRESSION TAG SEQADV 9C1B HIS B -10 UNP O14807 EXPRESSION TAG SEQADV 9C1B HIS B -9 UNP O14807 EXPRESSION TAG SEQADV 9C1B HIS B -8 UNP O14807 EXPRESSION TAG SEQADV 9C1B HIS B -7 UNP O14807 EXPRESSION TAG SEQADV 9C1B GLU B -6 UNP O14807 EXPRESSION TAG SEQADV 9C1B ASN B -5 UNP O14807 EXPRESSION TAG SEQADV 9C1B LEU B -4 UNP O14807 EXPRESSION TAG SEQADV 9C1B TYR B -3 UNP O14807 EXPRESSION TAG SEQADV 9C1B PHE B -2 UNP O14807 EXPRESSION TAG SEQADV 9C1B GLN B -1 UNP O14807 EXPRESSION TAG SEQADV 9C1B GLY B 0 UNP O14807 EXPRESSION TAG SEQADV 9C1B MET C -14 UNP O14807 INITIATING METHIONINE SEQADV 9C1B GLY C -13 UNP O14807 EXPRESSION TAG SEQADV 9C1B HIS C -12 UNP O14807 EXPRESSION TAG SEQADV 9C1B HIS C -11 UNP O14807 EXPRESSION TAG SEQADV 9C1B HIS C -10 UNP O14807 EXPRESSION TAG SEQADV 9C1B HIS C -9 UNP O14807 EXPRESSION TAG SEQADV 9C1B HIS C -8 UNP O14807 EXPRESSION TAG SEQADV 9C1B HIS C -7 UNP O14807 EXPRESSION TAG SEQADV 9C1B GLU C -6 UNP O14807 EXPRESSION TAG SEQADV 9C1B ASN C -5 UNP O14807 EXPRESSION TAG SEQADV 9C1B LEU C -4 UNP O14807 EXPRESSION TAG SEQADV 9C1B TYR C -3 UNP O14807 EXPRESSION TAG SEQADV 9C1B PHE C -2 UNP O14807 EXPRESSION TAG SEQADV 9C1B GLN C -1 UNP O14807 EXPRESSION TAG SEQADV 9C1B GLY C 0 UNP O14807 EXPRESSION TAG SEQADV 9C1B MET D -14 UNP O14807 INITIATING METHIONINE SEQADV 9C1B GLY D -13 UNP O14807 EXPRESSION TAG SEQADV 9C1B HIS D -12 UNP O14807 EXPRESSION TAG SEQADV 9C1B HIS D -11 UNP O14807 EXPRESSION TAG SEQADV 9C1B HIS D -10 UNP O14807 EXPRESSION TAG SEQADV 9C1B HIS D -9 UNP O14807 EXPRESSION TAG SEQADV 9C1B HIS D -8 UNP O14807 EXPRESSION TAG SEQADV 9C1B HIS D -7 UNP O14807 EXPRESSION TAG SEQADV 9C1B GLU D -6 UNP O14807 EXPRESSION TAG SEQADV 9C1B ASN D -5 UNP O14807 EXPRESSION TAG SEQADV 9C1B LEU D -4 UNP O14807 EXPRESSION TAG SEQADV 9C1B TYR D -3 UNP O14807 EXPRESSION TAG SEQADV 9C1B PHE D -2 UNP O14807 EXPRESSION TAG SEQADV 9C1B GLN D -1 UNP O14807 EXPRESSION TAG SEQADV 9C1B GLY D 0 UNP O14807 EXPRESSION TAG SEQRES 1 A 219 MET GLY HIS HIS HIS HIS HIS HIS GLU ASN LEU TYR PHE SEQRES 2 A 219 GLN GLY MET ALA THR SER ALA VAL PRO SER ASP ASN LEU SEQRES 3 A 219 PRO THR TYR LYS LEU VAL VAL VAL GLY ASP GLY GLY VAL SEQRES 4 A 219 GLY LYS SER ALA LEU THR ILE GLN PHE PHE GLN LYS ILE SEQRES 5 A 219 PHE VAL PRO ASP TYR ASP PRO THR ILE GLU ASP SER TYR SEQRES 6 A 219 LEU LYS HIS THR GLU ILE ASP ASN GLN TRP ALA ILE LEU SEQRES 7 A 219 ASP VAL LEU ASP THR ALA GLY GLN GLU GLU PHE SER ALA SEQRES 8 A 219 MET ARG GLU GLN TYR MET ARG THR GLY ASP GLY PHE LEU SEQRES 9 A 219 ILE VAL TYR SER VAL THR ASP LYS ALA SER PHE GLU HIS SEQRES 10 A 219 VAL ASP ARG PHE HIS GLN LEU ILE LEU ARG VAL LYS ASP SEQRES 11 A 219 ARG GLU SER PHE PRO MET ILE LEU VAL ALA ASN LYS VAL SEQRES 12 A 219 ASP LEU MET HIS LEU ARG LYS ILE THR ARG GLU GLN GLY SEQRES 13 A 219 LYS GLU MET ALA THR LYS HIS ASN ILE PRO TYR ILE GLU SEQRES 14 A 219 THR SER ALA LYS ASP PRO PRO LEU ASN VAL ASP LYS ALA SEQRES 15 A 219 PHE HIS ASP LEU VAL ARG VAL ILE ARG GLN GLN ILE PRO SEQRES 16 A 219 GLU LYS SER GLN LYS LYS LYS LYS LYS THR LYS TRP ARG SEQRES 17 A 219 GLY ASP ARG ALA THR GLY THR HIS LYS LEU GLN SEQRES 1 B 219 MET GLY HIS HIS HIS HIS HIS HIS GLU ASN LEU TYR PHE SEQRES 2 B 219 GLN GLY MET ALA THR SER ALA VAL PRO SER ASP ASN LEU SEQRES 3 B 219 PRO THR TYR LYS LEU VAL VAL VAL GLY ASP GLY GLY VAL SEQRES 4 B 219 GLY LYS SER ALA LEU THR ILE GLN PHE PHE GLN LYS ILE SEQRES 5 B 219 PHE VAL PRO ASP TYR ASP PRO THR ILE GLU ASP SER TYR SEQRES 6 B 219 LEU LYS HIS THR GLU ILE ASP ASN GLN TRP ALA ILE LEU SEQRES 7 B 219 ASP VAL LEU ASP THR ALA GLY GLN GLU GLU PHE SER ALA SEQRES 8 B 219 MET ARG GLU GLN TYR MET ARG THR GLY ASP GLY PHE LEU SEQRES 9 B 219 ILE VAL TYR SER VAL THR ASP LYS ALA SER PHE GLU HIS SEQRES 10 B 219 VAL ASP ARG PHE HIS GLN LEU ILE LEU ARG VAL LYS ASP SEQRES 11 B 219 ARG GLU SER PHE PRO MET ILE LEU VAL ALA ASN LYS VAL SEQRES 12 B 219 ASP LEU MET HIS LEU ARG LYS ILE THR ARG GLU GLN GLY SEQRES 13 B 219 LYS GLU MET ALA THR LYS HIS ASN ILE PRO TYR ILE GLU SEQRES 14 B 219 THR SER ALA LYS ASP PRO PRO LEU ASN VAL ASP LYS ALA SEQRES 15 B 219 PHE HIS ASP LEU VAL ARG VAL ILE ARG GLN GLN ILE PRO SEQRES 16 B 219 GLU LYS SER GLN LYS LYS LYS LYS LYS THR LYS TRP ARG SEQRES 17 B 219 GLY ASP ARG ALA THR GLY THR HIS LYS LEU GLN SEQRES 1 C 219 MET GLY HIS HIS HIS HIS HIS HIS GLU ASN LEU TYR PHE SEQRES 2 C 219 GLN GLY MET ALA THR SER ALA VAL PRO SER ASP ASN LEU SEQRES 3 C 219 PRO THR TYR LYS LEU VAL VAL VAL GLY ASP GLY GLY VAL SEQRES 4 C 219 GLY LYS SER ALA LEU THR ILE GLN PHE PHE GLN LYS ILE SEQRES 5 C 219 PHE VAL PRO ASP TYR ASP PRO THR ILE GLU ASP SER TYR SEQRES 6 C 219 LEU LYS HIS THR GLU ILE ASP ASN GLN TRP ALA ILE LEU SEQRES 7 C 219 ASP VAL LEU ASP THR ALA GLY GLN GLU GLU PHE SER ALA SEQRES 8 C 219 MET ARG GLU GLN TYR MET ARG THR GLY ASP GLY PHE LEU SEQRES 9 C 219 ILE VAL TYR SER VAL THR ASP LYS ALA SER PHE GLU HIS SEQRES 10 C 219 VAL ASP ARG PHE HIS GLN LEU ILE LEU ARG VAL LYS ASP SEQRES 11 C 219 ARG GLU SER PHE PRO MET ILE LEU VAL ALA ASN LYS VAL SEQRES 12 C 219 ASP LEU MET HIS LEU ARG LYS ILE THR ARG GLU GLN GLY SEQRES 13 C 219 LYS GLU MET ALA THR LYS HIS ASN ILE PRO TYR ILE GLU SEQRES 14 C 219 THR SER ALA LYS ASP PRO PRO LEU ASN VAL ASP LYS ALA SEQRES 15 C 219 PHE HIS ASP LEU VAL ARG VAL ILE ARG GLN GLN ILE PRO SEQRES 16 C 219 GLU LYS SER GLN LYS LYS LYS LYS LYS THR LYS TRP ARG SEQRES 17 C 219 GLY ASP ARG ALA THR GLY THR HIS LYS LEU GLN SEQRES 1 D 219 MET GLY HIS HIS HIS HIS HIS HIS GLU ASN LEU TYR PHE SEQRES 2 D 219 GLN GLY MET ALA THR SER ALA VAL PRO SER ASP ASN LEU SEQRES 3 D 219 PRO THR TYR LYS LEU VAL VAL VAL GLY ASP GLY GLY VAL SEQRES 4 D 219 GLY LYS SER ALA LEU THR ILE GLN PHE PHE GLN LYS ILE SEQRES 5 D 219 PHE VAL PRO ASP TYR ASP PRO THR ILE GLU ASP SER TYR SEQRES 6 D 219 LEU LYS HIS THR GLU ILE ASP ASN GLN TRP ALA ILE LEU SEQRES 7 D 219 ASP VAL LEU ASP THR ALA GLY GLN GLU GLU PHE SER ALA SEQRES 8 D 219 MET ARG GLU GLN TYR MET ARG THR GLY ASP GLY PHE LEU SEQRES 9 D 219 ILE VAL TYR SER VAL THR ASP LYS ALA SER PHE GLU HIS SEQRES 10 D 219 VAL ASP ARG PHE HIS GLN LEU ILE LEU ARG VAL LYS ASP SEQRES 11 D 219 ARG GLU SER PHE PRO MET ILE LEU VAL ALA ASN LYS VAL SEQRES 12 D 219 ASP LEU MET HIS LEU ARG LYS ILE THR ARG GLU GLN GLY SEQRES 13 D 219 LYS GLU MET ALA THR LYS HIS ASN ILE PRO TYR ILE GLU SEQRES 14 D 219 THR SER ALA LYS ASP PRO PRO LEU ASN VAL ASP LYS ALA SEQRES 15 D 219 PHE HIS ASP LEU VAL ARG VAL ILE ARG GLN GLN ILE PRO SEQRES 16 D 219 GLU LYS SER GLN LYS LYS LYS LYS LYS THR LYS TRP ARG SEQRES 17 D 219 GLY ASP ARG ALA THR GLY THR HIS LYS LEU GLN HET MG A 301 1 HET GDP A 302 28 HET PGE A 303 10 HET PG4 A 304 13 HET MG B 301 1 HET GDP B 302 28 HET PGE B 303 10 HET MG C 301 1 HET GDP C 302 28 HET PEG C 303 7 HET PG4 C 304 13 HET MG D 301 1 HET GDP D 302 28 HETNAM MG MAGNESIUM ION HETNAM GDP GUANOSINE-5'-DIPHOSPHATE HETNAM PGE TRIETHYLENE GLYCOL HETNAM PG4 TETRAETHYLENE GLYCOL HETNAM PEG DI(HYDROXYETHYL)ETHER FORMUL 5 MG 4(MG 2+) FORMUL 6 GDP 4(C10 H15 N5 O11 P2) FORMUL 7 PGE 2(C6 H14 O4) FORMUL 8 PG4 2(C8 H18 O5) FORMUL 14 PEG C4 H10 O3 FORMUL 18 HOH *351(H2 O) HELIX 1 AA1 GLY A 25 GLN A 35 1 11 HELIX 2 AA2 SER A 75 GLY A 85 1 11 HELIX 3 AA3 ASP A 96 HIS A 102 1 7 HELIX 4 AA4 HIS A 102 ASP A 115 1 14 HELIX 5 AA5 LEU A 130 ARG A 134 5 5 HELIX 6 AA6 THR A 137 ASN A 149 1 13 HELIX 7 AA7 ASN A 163 GLN A 177 1 15 HELIX 8 AA8 GLY B 25 GLN B 35 1 11 HELIX 9 AA9 SER B 75 GLY B 85 1 11 HELIX 10 AB1 ASP B 96 HIS B 102 1 7 HELIX 11 AB2 HIS B 102 ASP B 115 1 14 HELIX 12 AB3 LEU B 130 ARG B 134 5 5 HELIX 13 AB4 THR B 137 ASN B 149 1 13 HELIX 14 AB5 ASN B 163 GLN B 177 1 15 HELIX 15 AB6 GLY C 25 GLN C 35 1 11 HELIX 16 AB7 SER C 75 GLY C 85 1 11 HELIX 17 AB8 ASP C 96 HIS C 102 1 7 HELIX 18 AB9 HIS C 102 ASP C 115 1 14 HELIX 19 AC1 LEU C 130 ARG C 134 5 5 HELIX 20 AC2 THR C 137 ASN C 149 1 13 HELIX 21 AC3 ASN C 163 GLN C 177 1 15 HELIX 22 AC4 GLY D 25 GLN D 35 1 11 HELIX 23 AC5 SER D 75 GLY D 85 1 11 HELIX 24 AC6 ASP D 96 HIS D 102 1 7 HELIX 25 AC7 HIS D 102 ASP D 115 1 14 HELIX 26 AC8 LEU D 130 ARG D 134 5 5 HELIX 27 AC9 THR D 137 ASN D 149 1 13 HELIX 28 AD1 ASN D 163 GLN D 177 1 15 SHEET 1 AA1 6 ASP A 48 ILE A 56 0 SHEET 2 AA1 6 GLN A 59 ASP A 67 -1 O ALA A 61 N THR A 54 SHEET 3 AA1 6 THR A 13 VAL A 19 1 N VAL A 18 O LEU A 66 SHEET 4 AA1 6 GLY A 87 SER A 93 1 O LEU A 89 N VAL A 17 SHEET 5 AA1 6 MET A 121 ASN A 126 1 O ASN A 126 N TYR A 92 SHEET 6 AA1 6 TYR A 152 GLU A 154 1 O ILE A 153 N ALA A 125 SHEET 1 AA2 6 ASP B 48 ILE B 56 0 SHEET 2 AA2 6 GLN B 59 ASP B 67 -1 O ASP B 67 N ASP B 48 SHEET 3 AA2 6 THR B 13 VAL B 19 1 N TYR B 14 O ASP B 64 SHEET 4 AA2 6 GLY B 87 SER B 93 1 O VAL B 91 N VAL B 19 SHEET 5 AA2 6 MET B 121 ASN B 126 1 O ASN B 126 N TYR B 92 SHEET 6 AA2 6 TYR B 152 GLU B 154 1 O ILE B 153 N ALA B 125 SHEET 1 AA3 6 ASP C 48 ILE C 56 0 SHEET 2 AA3 6 GLN C 59 ASP C 67 -1 O ASP C 67 N ASP C 48 SHEET 3 AA3 6 THR C 13 VAL C 19 1 N TYR C 14 O ILE C 62 SHEET 4 AA3 6 GLY C 87 SER C 93 1 O VAL C 91 N VAL C 19 SHEET 5 AA3 6 MET C 121 ASN C 126 1 O ASN C 126 N TYR C 92 SHEET 6 AA3 6 TYR C 152 GLU C 154 1 O ILE C 153 N ALA C 125 SHEET 1 AA4 6 ASP D 48 ILE D 56 0 SHEET 2 AA4 6 GLN D 59 ASP D 67 -1 O ALA D 61 N THR D 54 SHEET 3 AA4 6 THR D 13 VAL D 19 1 N TYR D 14 O ASP D 64 SHEET 4 AA4 6 GLY D 87 SER D 93 1 O LEU D 89 N VAL D 17 SHEET 5 AA4 6 MET D 121 ASN D 126 1 O ASN D 126 N TYR D 92 SHEET 6 AA4 6 TYR D 152 GLU D 154 1 O ILE D 153 N ALA D 125 LINK OG SER A 27 MG MG A 301 1555 1555 2.25 LINK MG MG A 301 O2B GDP A 302 1555 1555 2.10 LINK MG MG A 301 O HOH A 404 1555 1555 2.11 LINK MG MG A 301 O HOH A 415 1555 1555 2.56 LINK MG MG A 301 O HOH A 416 1555 1555 2.10 LINK MG MG A 301 O HOH A 430 1555 1555 2.06 LINK OG SER B 27 MG MG B 301 1555 1555 2.11 LINK MG MG B 301 O2B GDP B 302 1555 1555 2.02 LINK MG MG B 301 O HOH B 404 1555 1555 2.09 LINK MG MG B 301 O HOH B 411 1555 1555 2.29 LINK MG MG B 301 O HOH B 412 1555 1555 2.33 LINK MG MG B 301 O HOH B 426 1555 1555 2.09 LINK OG SER C 27 MG MG C 301 1555 1555 2.18 LINK MG MG C 301 O2B GDP C 302 1555 1555 2.21 LINK MG MG C 301 O HOH C 404 1555 1555 2.22 LINK MG MG C 301 O HOH C 405 1555 1555 2.27 LINK MG MG C 301 O HOH C 418 1555 1555 2.35 LINK MG MG C 301 O HOH C 427 1555 1555 2.18 LINK OG SER D 27 MG MG D 301 1555 1555 2.50 LINK MG MG D 301 O2B GDP D 302 1555 1555 2.21 LINK MG MG D 301 O HOH D 405 1555 1555 2.16 LINK MG MG D 301 O HOH D 411 1555 1555 2.31 LINK MG MG D 301 O HOH D 413 1555 1555 2.26 LINK MG MG D 301 O HOH D 431 1555 1555 2.07 CISPEP 1 ASP A 159 PRO A 160 0 0.53 CISPEP 2 ASP B 159 PRO B 160 0 2.00 CISPEP 3 ASP C 159 PRO C 160 0 -0.51 CISPEP 4 ASP D 159 PRO D 160 0 -1.15 CRYST1 53.724 55.604 67.770 103.74 90.14 93.64 P 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.018614 0.001183 0.000337 0.00000 SCALE2 0.000000 0.018021 0.004418 0.00000 SCALE3 0.000000 0.000000 0.015193 0.00000