data_9C3D # _entry.id 9C3D # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.395 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 9C3D pdb_00009c3d 10.2210/pdb9c3d/pdb WWPDB D_1000284629 ? ? # _pdbx_audit_revision_history.ordinal 1 _pdbx_audit_revision_history.data_content_type 'Structure model' _pdbx_audit_revision_history.major_revision 1 _pdbx_audit_revision_history.minor_revision 0 _pdbx_audit_revision_history.revision_date 2024-07-17 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 9C3D _pdbx_database_status.recvd_initial_deposition_date 2024-05-31 _pdbx_database_status.SG_entry Y _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # _pdbx_database_related.db_name TargetTrack _pdbx_database_related.db_id IDP97232 _pdbx_database_related.content_type unspecified _pdbx_database_related.details . # _pdbx_contact_author.id 2 _pdbx_contact_author.email andrzejj@anl.gov _pdbx_contact_author.name_first Andrzej _pdbx_contact_author.name_last Joachimiak _pdbx_contact_author.name_mi ? _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0003-2535-6209 # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Kim, Y.' 1 ? 'Maltseva, N.' 2 ? 'Welk, L.' 3 ? 'Endres, M.' 4 ? 'Joachimiak, A.' 5 ? 'Center for Structural Biology of Infectious Diseases (CSBID)' 6 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country ? _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'To Be Published' _citation.journal_id_ASTM ? _citation.journal_id_CSD 0353 _citation.journal_id_ISSN ? _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume ? _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title 'Crystal structure of metallo-beta-lactamase superfamily protein CcrA-like_MBL-B1 from Dyadobacter fermentans' _citation.year ? _citation.database_id_CSD ? _citation.pdbx_database_id_DOI ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Kim, Y.' 1 ? primary 'Maltseva, N.' 2 ? primary 'Welk, L.' 3 ? primary 'Endres, M.' 4 ? primary 'Joachimiak, A.' 5 ? primary 'Center for Structural Biology of Infectious Diseases (CSBID)' 6 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Metallo-beta-lactamase type 2' 24892.285 1 3.5.2.6 ? 'UNP residues 20-244' ? 2 non-polymer syn 'ZINC ION' 65.409 2 ? ? ? ? 3 water nat water 18.015 130 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'B2 metallo-beta-lactamase,Metallo-beta-lactamase type II' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;QTPDKSFKTDDLIVQKLTDHTYQHLTYLQTQTFGKVPCNGLIVFDGGEAVIFDTPADDATSEKVIRWVEDSLKCKVKAVI ATHFHEDCVGGLKAFHEHGIPSYATNKTIAFDKEHKFPVPQKGFDNKLELNVGTKPVVAAFYGEGHTRDNIIGYFPSEKV MFGGCLIKEVDATKGNLADANVDVWPATVANIRKQYSDVKVVIPGHGKIGGSELLDYTIKLFSQK ; _entity_poly.pdbx_seq_one_letter_code_can ;QTPDKSFKTDDLIVQKLTDHTYQHLTYLQTQTFGKVPCNGLIVFDGGEAVIFDTPADDATSEKVIRWVEDSLKCKVKAVI ATHFHEDCVGGLKAFHEHGIPSYATNKTIAFDKEHKFPVPQKGFDNKLELNVGTKPVVAAFYGEGHTRDNIIGYFPSEKV MFGGCLIKEVDATKGNLADANVDVWPATVANIRKQYSDVKVVIPGHGKIGGSELLDYTIKLFSQK ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier IDP97232 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'ZINC ION' ZN 3 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLN n 1 2 THR n 1 3 PRO n 1 4 ASP n 1 5 LYS n 1 6 SER n 1 7 PHE n 1 8 LYS n 1 9 THR n 1 10 ASP n 1 11 ASP n 1 12 LEU n 1 13 ILE n 1 14 VAL n 1 15 GLN n 1 16 LYS n 1 17 LEU n 1 18 THR n 1 19 ASP n 1 20 HIS n 1 21 THR n 1 22 TYR n 1 23 GLN n 1 24 HIS n 1 25 LEU n 1 26 THR n 1 27 TYR n 1 28 LEU n 1 29 GLN n 1 30 THR n 1 31 GLN n 1 32 THR n 1 33 PHE n 1 34 GLY n 1 35 LYS n 1 36 VAL n 1 37 PRO n 1 38 CYS n 1 39 ASN n 1 40 GLY n 1 41 LEU n 1 42 ILE n 1 43 VAL n 1 44 PHE n 1 45 ASP n 1 46 GLY n 1 47 GLY n 1 48 GLU n 1 49 ALA n 1 50 VAL n 1 51 ILE n 1 52 PHE n 1 53 ASP n 1 54 THR n 1 55 PRO n 1 56 ALA n 1 57 ASP n 1 58 ASP n 1 59 ALA n 1 60 THR n 1 61 SER n 1 62 GLU n 1 63 LYS n 1 64 VAL n 1 65 ILE n 1 66 ARG n 1 67 TRP n 1 68 VAL n 1 69 GLU n 1 70 ASP n 1 71 SER n 1 72 LEU n 1 73 LYS n 1 74 CYS n 1 75 LYS n 1 76 VAL n 1 77 LYS n 1 78 ALA n 1 79 VAL n 1 80 ILE n 1 81 ALA n 1 82 THR n 1 83 HIS n 1 84 PHE n 1 85 HIS n 1 86 GLU n 1 87 ASP n 1 88 CYS n 1 89 VAL n 1 90 GLY n 1 91 GLY n 1 92 LEU n 1 93 LYS n 1 94 ALA n 1 95 PHE n 1 96 HIS n 1 97 GLU n 1 98 HIS n 1 99 GLY n 1 100 ILE n 1 101 PRO n 1 102 SER n 1 103 TYR n 1 104 ALA n 1 105 THR n 1 106 ASN n 1 107 LYS n 1 108 THR n 1 109 ILE n 1 110 ALA n 1 111 PHE n 1 112 ASP n 1 113 LYS n 1 114 GLU n 1 115 HIS n 1 116 LYS n 1 117 PHE n 1 118 PRO n 1 119 VAL n 1 120 PRO n 1 121 GLN n 1 122 LYS n 1 123 GLY n 1 124 PHE n 1 125 ASP n 1 126 ASN n 1 127 LYS n 1 128 LEU n 1 129 GLU n 1 130 LEU n 1 131 ASN n 1 132 VAL n 1 133 GLY n 1 134 THR n 1 135 LYS n 1 136 PRO n 1 137 VAL n 1 138 VAL n 1 139 ALA n 1 140 ALA n 1 141 PHE n 1 142 TYR n 1 143 GLY n 1 144 GLU n 1 145 GLY n 1 146 HIS n 1 147 THR n 1 148 ARG n 1 149 ASP n 1 150 ASN n 1 151 ILE n 1 152 ILE n 1 153 GLY n 1 154 TYR n 1 155 PHE n 1 156 PRO n 1 157 SER n 1 158 GLU n 1 159 LYS n 1 160 VAL n 1 161 MET n 1 162 PHE n 1 163 GLY n 1 164 GLY n 1 165 CYS n 1 166 LEU n 1 167 ILE n 1 168 LYS n 1 169 GLU n 1 170 VAL n 1 171 ASP n 1 172 ALA n 1 173 THR n 1 174 LYS n 1 175 GLY n 1 176 ASN n 1 177 LEU n 1 178 ALA n 1 179 ASP n 1 180 ALA n 1 181 ASN n 1 182 VAL n 1 183 ASP n 1 184 VAL n 1 185 TRP n 1 186 PRO n 1 187 ALA n 1 188 THR n 1 189 VAL n 1 190 ALA n 1 191 ASN n 1 192 ILE n 1 193 ARG n 1 194 LYS n 1 195 GLN n 1 196 TYR n 1 197 SER n 1 198 ASP n 1 199 VAL n 1 200 LYS n 1 201 VAL n 1 202 VAL n 1 203 ILE n 1 204 PRO n 1 205 GLY n 1 206 HIS n 1 207 GLY n 1 208 LYS n 1 209 ILE n 1 210 GLY n 1 211 GLY n 1 212 SER n 1 213 GLU n 1 214 LEU n 1 215 LEU n 1 216 ASP n 1 217 TYR n 1 218 THR n 1 219 ILE n 1 220 LYS n 1 221 LEU n 1 222 PHE n 1 223 SER n 1 224 GLN n 1 225 LYS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 225 _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene Dfer_1371 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Dyadobacter fermentans DSM 18053' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 471854 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant Gold _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pMGCSG53 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 ZN non-polymer . 'ZINC ION' ? 'Zn 2' 65.409 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLN 1 20 20 GLN GLN A . n A 1 2 THR 2 21 21 THR THR A . n A 1 3 PRO 3 22 22 PRO PRO A . n A 1 4 ASP 4 23 23 ASP ASP A . n A 1 5 LYS 5 24 24 LYS LYS A . n A 1 6 SER 6 25 25 SER SER A . n A 1 7 PHE 7 26 26 PHE PHE A . n A 1 8 LYS 8 27 27 LYS LYS A . n A 1 9 THR 9 28 28 THR THR A . n A 1 10 ASP 10 29 29 ASP ASP A . n A 1 11 ASP 11 30 30 ASP ASP A . n A 1 12 LEU 12 31 31 LEU LEU A . n A 1 13 ILE 13 32 32 ILE ILE A . n A 1 14 VAL 14 33 33 VAL VAL A . n A 1 15 GLN 15 34 34 GLN GLN A . n A 1 16 LYS 16 35 35 LYS LYS A . n A 1 17 LEU 17 36 36 LEU LEU A . n A 1 18 THR 18 37 37 THR THR A . n A 1 19 ASP 19 38 38 ASP ASP A . n A 1 20 HIS 20 39 39 HIS HIS A . n A 1 21 THR 21 40 40 THR THR A . n A 1 22 TYR 22 41 41 TYR TYR A . n A 1 23 GLN 23 42 42 GLN GLN A . n A 1 24 HIS 24 43 43 HIS HIS A . n A 1 25 LEU 25 44 44 LEU LEU A . n A 1 26 THR 26 45 45 THR THR A . n A 1 27 TYR 27 46 46 TYR TYR A . n A 1 28 LEU 28 47 47 LEU LEU A . n A 1 29 GLN 29 48 48 GLN GLN A . n A 1 30 THR 30 49 49 THR THR A . n A 1 31 GLN 31 50 50 GLN GLN A . n A 1 32 THR 32 51 51 THR THR A . n A 1 33 PHE 33 52 52 PHE PHE A . n A 1 34 GLY 34 53 53 GLY GLY A . n A 1 35 LYS 35 54 54 LYS LYS A . n A 1 36 VAL 36 55 55 VAL VAL A . n A 1 37 PRO 37 56 56 PRO PRO A . n A 1 38 CYS 38 57 57 CYS CYS A . n A 1 39 ASN 39 58 58 ASN ASN A . n A 1 40 GLY 40 59 59 GLY GLY A . n A 1 41 LEU 41 60 60 LEU LEU A . n A 1 42 ILE 42 61 61 ILE ILE A . n A 1 43 VAL 43 62 62 VAL VAL A . n A 1 44 PHE 44 63 63 PHE PHE A . n A 1 45 ASP 45 64 64 ASP ASP A . n A 1 46 GLY 46 65 65 GLY GLY A . n A 1 47 GLY 47 66 66 GLY GLY A . n A 1 48 GLU 48 67 67 GLU GLU A . n A 1 49 ALA 49 68 68 ALA ALA A . n A 1 50 VAL 50 69 69 VAL VAL A . n A 1 51 ILE 51 70 70 ILE ILE A . n A 1 52 PHE 52 71 71 PHE PHE A . n A 1 53 ASP 53 72 72 ASP ASP A . n A 1 54 THR 54 73 73 THR THR A . n A 1 55 PRO 55 74 74 PRO PRO A . n A 1 56 ALA 56 75 75 ALA ALA A . n A 1 57 ASP 57 76 76 ASP ASP A . n A 1 58 ASP 58 77 77 ASP ASP A . n A 1 59 ALA 59 78 78 ALA ALA A . n A 1 60 THR 60 79 79 THR THR A . n A 1 61 SER 61 80 80 SER SER A . n A 1 62 GLU 62 81 81 GLU GLU A . n A 1 63 LYS 63 82 82 LYS LYS A . n A 1 64 VAL 64 83 83 VAL VAL A . n A 1 65 ILE 65 84 84 ILE ILE A . n A 1 66 ARG 66 85 85 ARG ARG A . n A 1 67 TRP 67 86 86 TRP TRP A . n A 1 68 VAL 68 87 87 VAL VAL A . n A 1 69 GLU 69 88 88 GLU GLU A . n A 1 70 ASP 70 89 89 ASP ASP A . n A 1 71 SER 71 90 90 SER SER A . n A 1 72 LEU 72 91 91 LEU LEU A . n A 1 73 LYS 73 92 92 LYS LYS A . n A 1 74 CYS 74 93 93 CYS CYS A . n A 1 75 LYS 75 94 94 LYS LYS A . n A 1 76 VAL 76 95 95 VAL VAL A . n A 1 77 LYS 77 96 96 LYS LYS A . n A 1 78 ALA 78 97 97 ALA ALA A . n A 1 79 VAL 79 98 98 VAL VAL A . n A 1 80 ILE 80 99 99 ILE ILE A . n A 1 81 ALA 81 100 100 ALA ALA A . n A 1 82 THR 82 101 101 THR THR A . n A 1 83 HIS 83 102 102 HIS HIS A . n A 1 84 PHE 84 103 103 PHE PHE A . n A 1 85 HIS 85 104 104 HIS HIS A . n A 1 86 GLU 86 105 105 GLU GLU A . n A 1 87 ASP 87 106 106 ASP ASP A . n A 1 88 CYS 88 107 107 CYS CYS A . n A 1 89 VAL 89 108 108 VAL VAL A . n A 1 90 GLY 90 109 109 GLY GLY A . n A 1 91 GLY 91 110 110 GLY GLY A . n A 1 92 LEU 92 111 111 LEU LEU A . n A 1 93 LYS 93 112 112 LYS LYS A . n A 1 94 ALA 94 113 113 ALA ALA A . n A 1 95 PHE 95 114 114 PHE PHE A . n A 1 96 HIS 96 115 115 HIS HIS A . n A 1 97 GLU 97 116 116 GLU GLU A . n A 1 98 HIS 98 117 117 HIS HIS A . n A 1 99 GLY 99 118 118 GLY GLY A . n A 1 100 ILE 100 119 119 ILE ILE A . n A 1 101 PRO 101 120 120 PRO PRO A . n A 1 102 SER 102 121 121 SER SER A . n A 1 103 TYR 103 122 122 TYR TYR A . n A 1 104 ALA 104 123 123 ALA ALA A . n A 1 105 THR 105 124 124 THR THR A . n A 1 106 ASN 106 125 125 ASN ASN A . n A 1 107 LYS 107 126 126 LYS LYS A . n A 1 108 THR 108 127 127 THR THR A . n A 1 109 ILE 109 128 128 ILE ILE A . n A 1 110 ALA 110 129 129 ALA ALA A . n A 1 111 PHE 111 130 130 PHE PHE A . n A 1 112 ASP 112 131 131 ASP ASP A . n A 1 113 LYS 113 132 132 LYS LYS A . n A 1 114 GLU 114 133 133 GLU GLU A . n A 1 115 HIS 115 134 134 HIS HIS A . n A 1 116 LYS 116 135 135 LYS LYS A . n A 1 117 PHE 117 136 136 PHE PHE A . n A 1 118 PRO 118 137 137 PRO PRO A . n A 1 119 VAL 119 138 138 VAL VAL A . n A 1 120 PRO 120 139 139 PRO PRO A . n A 1 121 GLN 121 140 140 GLN GLN A . n A 1 122 LYS 122 141 141 LYS LYS A . n A 1 123 GLY 123 142 142 GLY GLY A . n A 1 124 PHE 124 143 143 PHE PHE A . n A 1 125 ASP 125 144 144 ASP ASP A . n A 1 126 ASN 126 145 145 ASN ASN A . n A 1 127 LYS 127 146 146 LYS LYS A . n A 1 128 LEU 128 147 147 LEU LEU A . n A 1 129 GLU 129 148 148 GLU GLU A . n A 1 130 LEU 130 149 149 LEU LEU A . n A 1 131 ASN 131 150 150 ASN ASN A . n A 1 132 VAL 132 151 151 VAL VAL A . n A 1 133 GLY 133 152 152 GLY GLY A . n A 1 134 THR 134 153 153 THR THR A . n A 1 135 LYS 135 154 154 LYS LYS A . n A 1 136 PRO 136 155 155 PRO PRO A . n A 1 137 VAL 137 156 156 VAL VAL A . n A 1 138 VAL 138 157 157 VAL VAL A . n A 1 139 ALA 139 158 158 ALA ALA A . n A 1 140 ALA 140 159 159 ALA ALA A . n A 1 141 PHE 141 160 160 PHE PHE A . n A 1 142 TYR 142 161 161 TYR TYR A . n A 1 143 GLY 143 162 162 GLY GLY A . n A 1 144 GLU 144 163 163 GLU GLU A . n A 1 145 GLY 145 164 164 GLY GLY A . n A 1 146 HIS 146 165 165 HIS HIS A . n A 1 147 THR 147 166 166 THR THR A . n A 1 148 ARG 148 167 167 ARG ARG A . n A 1 149 ASP 149 168 168 ASP ASP A . n A 1 150 ASN 150 169 169 ASN ASN A . n A 1 151 ILE 151 170 170 ILE ILE A . n A 1 152 ILE 152 171 171 ILE ILE A . n A 1 153 GLY 153 172 172 GLY GLY A . n A 1 154 TYR 154 173 173 TYR TYR A . n A 1 155 PHE 155 174 174 PHE PHE A . n A 1 156 PRO 156 175 175 PRO PRO A . n A 1 157 SER 157 176 176 SER SER A . n A 1 158 GLU 158 177 177 GLU GLU A . n A 1 159 LYS 159 178 178 LYS LYS A . n A 1 160 VAL 160 179 179 VAL VAL A . n A 1 161 MET 161 180 180 MET MET A . n A 1 162 PHE 162 181 181 PHE PHE A . n A 1 163 GLY 163 182 182 GLY GLY A . n A 1 164 GLY 164 183 183 GLY GLY A . n A 1 165 CYS 165 184 184 CYS CYS A . n A 1 166 LEU 166 185 185 LEU LEU A . n A 1 167 ILE 167 186 186 ILE ILE A . n A 1 168 LYS 168 187 187 LYS LYS A . n A 1 169 GLU 169 188 188 GLU GLU A . n A 1 170 VAL 170 189 189 VAL VAL A . n A 1 171 ASP 171 190 190 ASP ASP A . n A 1 172 ALA 172 191 191 ALA ALA A . n A 1 173 THR 173 192 192 THR THR A . n A 1 174 LYS 174 193 193 LYS LYS A . n A 1 175 GLY 175 194 194 GLY GLY A . n A 1 176 ASN 176 195 195 ASN ASN A . n A 1 177 LEU 177 196 196 LEU LEU A . n A 1 178 ALA 178 197 197 ALA ALA A . n A 1 179 ASP 179 198 198 ASP ASP A . n A 1 180 ALA 180 199 199 ALA ALA A . n A 1 181 ASN 181 200 200 ASN ASN A . n A 1 182 VAL 182 201 201 VAL VAL A . n A 1 183 ASP 183 202 202 ASP ASP A . n A 1 184 VAL 184 203 203 VAL VAL A . n A 1 185 TRP 185 204 204 TRP TRP A . n A 1 186 PRO 186 205 205 PRO PRO A . n A 1 187 ALA 187 206 206 ALA ALA A . n A 1 188 THR 188 207 207 THR THR A . n A 1 189 VAL 189 208 208 VAL VAL A . n A 1 190 ALA 190 209 209 ALA ALA A . n A 1 191 ASN 191 210 210 ASN ASN A . n A 1 192 ILE 192 211 211 ILE ILE A . n A 1 193 ARG 193 212 212 ARG ARG A . n A 1 194 LYS 194 213 213 LYS LYS A . n A 1 195 GLN 195 214 214 GLN GLN A . n A 1 196 TYR 196 215 215 TYR TYR A . n A 1 197 SER 197 216 216 SER SER A . n A 1 198 ASP 198 217 217 ASP ASP A . n A 1 199 VAL 199 218 218 VAL VAL A . n A 1 200 LYS 200 219 219 LYS LYS A . n A 1 201 VAL 201 220 220 VAL VAL A . n A 1 202 VAL 202 221 221 VAL VAL A . n A 1 203 ILE 203 222 222 ILE ILE A . n A 1 204 PRO 204 223 223 PRO PRO A . n A 1 205 GLY 205 224 224 GLY GLY A . n A 1 206 HIS 206 225 225 HIS HIS A . n A 1 207 GLY 207 226 226 GLY GLY A . n A 1 208 LYS 208 227 227 LYS LYS A . n A 1 209 ILE 209 228 228 ILE ILE A . n A 1 210 GLY 210 229 229 GLY GLY A . n A 1 211 GLY 211 230 230 GLY GLY A . n A 1 212 SER 212 231 231 SER SER A . n A 1 213 GLU 213 232 232 GLU GLU A . n A 1 214 LEU 214 233 233 LEU LEU A . n A 1 215 LEU 215 234 234 LEU LEU A . n A 1 216 ASP 216 235 235 ASP ASP A . n A 1 217 TYR 217 236 236 TYR TYR A . n A 1 218 THR 218 237 237 THR THR A . n A 1 219 ILE 219 238 238 ILE ILE A . n A 1 220 LYS 220 239 239 LYS LYS A . n A 1 221 LEU 221 240 240 LEU LEU A . n A 1 222 PHE 222 241 241 PHE PHE A . n A 1 223 SER 223 242 242 SER SER A . n A 1 224 GLN 224 243 243 GLN GLN A . n A 1 225 LYS 225 244 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ZN 1 301 1 ZN ZN A . C 2 ZN 1 302 2 ZN ZN A . D 3 HOH 1 401 133 HOH HOH A . D 3 HOH 2 402 118 HOH HOH A . D 3 HOH 3 403 129 HOH HOH A . D 3 HOH 4 404 55 HOH HOH A . D 3 HOH 5 405 30 HOH HOH A . D 3 HOH 6 406 96 HOH HOH A . D 3 HOH 7 407 45 HOH HOH A . D 3 HOH 8 408 131 HOH HOH A . D 3 HOH 9 409 113 HOH HOH A . D 3 HOH 10 410 76 HOH HOH A . D 3 HOH 11 411 19 HOH HOH A . D 3 HOH 12 412 71 HOH HOH A . D 3 HOH 13 413 98 HOH HOH A . D 3 HOH 14 414 58 HOH HOH A . D 3 HOH 15 415 22 HOH HOH A . D 3 HOH 16 416 7 HOH HOH A . D 3 HOH 17 417 93 HOH HOH A . D 3 HOH 18 418 99 HOH HOH A . D 3 HOH 19 419 40 HOH HOH A . D 3 HOH 20 420 21 HOH HOH A . D 3 HOH 21 421 101 HOH HOH A . D 3 HOH 22 422 107 HOH HOH A . D 3 HOH 23 423 91 HOH HOH A . D 3 HOH 24 424 64 HOH HOH A . D 3 HOH 25 425 38 HOH HOH A . D 3 HOH 26 426 123 HOH HOH A . D 3 HOH 27 427 39 HOH HOH A . D 3 HOH 28 428 4 HOH HOH A . D 3 HOH 29 429 121 HOH HOH A . D 3 HOH 30 430 81 HOH HOH A . D 3 HOH 31 431 54 HOH HOH A . D 3 HOH 32 432 41 HOH HOH A . D 3 HOH 33 433 23 HOH HOH A . D 3 HOH 34 434 56 HOH HOH A . D 3 HOH 35 435 49 HOH HOH A . D 3 HOH 36 436 127 HOH HOH A . D 3 HOH 37 437 14 HOH HOH A . D 3 HOH 38 438 25 HOH HOH A . D 3 HOH 39 439 109 HOH HOH A . D 3 HOH 40 440 83 HOH HOH A . D 3 HOH 41 441 114 HOH HOH A . D 3 HOH 42 442 27 HOH HOH A . D 3 HOH 43 443 18 HOH HOH A . D 3 HOH 44 444 10 HOH HOH A . D 3 HOH 45 445 47 HOH HOH A . D 3 HOH 46 446 42 HOH HOH A . D 3 HOH 47 447 13 HOH HOH A . D 3 HOH 48 448 62 HOH HOH A . D 3 HOH 49 449 69 HOH HOH A . D 3 HOH 50 450 3 HOH HOH A . D 3 HOH 51 451 68 HOH HOH A . D 3 HOH 52 452 104 HOH HOH A . D 3 HOH 53 453 28 HOH HOH A . D 3 HOH 54 454 26 HOH HOH A . D 3 HOH 55 455 37 HOH HOH A . D 3 HOH 56 456 117 HOH HOH A . D 3 HOH 57 457 20 HOH HOH A . D 3 HOH 58 458 74 HOH HOH A . D 3 HOH 59 459 5 HOH HOH A . D 3 HOH 60 460 16 HOH HOH A . D 3 HOH 61 461 125 HOH HOH A . D 3 HOH 62 462 34 HOH HOH A . D 3 HOH 63 463 9 HOH HOH A . D 3 HOH 64 464 53 HOH HOH A . D 3 HOH 65 465 100 HOH HOH A . D 3 HOH 66 466 50 HOH HOH A . D 3 HOH 67 467 63 HOH HOH A . D 3 HOH 68 468 87 HOH HOH A . D 3 HOH 69 469 124 HOH HOH A . D 3 HOH 70 470 110 HOH HOH A . D 3 HOH 71 471 8 HOH HOH A . D 3 HOH 72 472 108 HOH HOH A . D 3 HOH 73 473 1 HOH HOH A . D 3 HOH 74 474 46 HOH HOH A . D 3 HOH 75 475 29 HOH HOH A . D 3 HOH 76 476 94 HOH HOH A . D 3 HOH 77 477 35 HOH HOH A . D 3 HOH 78 478 105 HOH HOH A . D 3 HOH 79 479 77 HOH HOH A . D 3 HOH 80 480 32 HOH HOH A . D 3 HOH 81 481 6 HOH HOH A . D 3 HOH 82 482 24 HOH HOH A . D 3 HOH 83 483 95 HOH HOH A . D 3 HOH 84 484 115 HOH HOH A . D 3 HOH 85 485 52 HOH HOH A . D 3 HOH 86 486 60 HOH HOH A . D 3 HOH 87 487 36 HOH HOH A . D 3 HOH 88 488 126 HOH HOH A . D 3 HOH 89 489 33 HOH HOH A . D 3 HOH 90 490 70 HOH HOH A . D 3 HOH 91 491 57 HOH HOH A . D 3 HOH 92 492 112 HOH HOH A . D 3 HOH 93 493 17 HOH HOH A . D 3 HOH 94 494 106 HOH HOH A . D 3 HOH 95 495 48 HOH HOH A . D 3 HOH 96 496 11 HOH HOH A . D 3 HOH 97 497 31 HOH HOH A . D 3 HOH 98 498 116 HOH HOH A . D 3 HOH 99 499 102 HOH HOH A . D 3 HOH 100 500 44 HOH HOH A . D 3 HOH 101 501 97 HOH HOH A . D 3 HOH 102 502 75 HOH HOH A . D 3 HOH 103 503 2 HOH HOH A . D 3 HOH 104 504 66 HOH HOH A . D 3 HOH 105 505 89 HOH HOH A . D 3 HOH 106 506 12 HOH HOH A . D 3 HOH 107 507 130 HOH HOH A . D 3 HOH 108 508 122 HOH HOH A . D 3 HOH 109 509 78 HOH HOH A . D 3 HOH 110 510 128 HOH HOH A . D 3 HOH 111 511 135 HOH HOH A . D 3 HOH 112 512 61 HOH HOH A . D 3 HOH 113 513 132 HOH HOH A . D 3 HOH 114 514 51 HOH HOH A . D 3 HOH 115 515 120 HOH HOH A . D 3 HOH 116 516 85 HOH HOH A . D 3 HOH 117 517 43 HOH HOH A . D 3 HOH 118 518 119 HOH HOH A . D 3 HOH 119 519 86 HOH HOH A . D 3 HOH 120 520 90 HOH HOH A . D 3 HOH 121 521 82 HOH HOH A . D 3 HOH 122 522 79 HOH HOH A . D 3 HOH 123 523 73 HOH HOH A . D 3 HOH 124 524 80 HOH HOH A . D 3 HOH 125 525 67 HOH HOH A . D 3 HOH 126 526 88 HOH HOH A . D 3 HOH 127 527 59 HOH HOH A . D 3 HOH 128 528 111 HOH HOH A . D 3 HOH 129 529 65 HOH HOH A . D 3 HOH 130 530 134 HOH HOH A . # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.20.1_4487 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? HKL-3000 ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? HKL-3000 ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? MOLREP ? ? ? . 4 ? phasing ? ? ? ? ? ? ? ? ? ? ? HKL-3000 ? ? ? . 5 # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 90.000 _cell.angle_beta_esd ? _cell.angle_gamma 90.000 _cell.angle_gamma_esd ? _cell.entry_id 9C3D _cell.details ? _cell.formula_units_Z ? _cell.length_a 47.176 _cell.length_a_esd ? _cell.length_b 62.256 _cell.length_b_esd ? _cell.length_c 72.387 _cell.length_c_esd ? _cell.volume 212599.827 _cell.volume_esd ? _cell.Z_PDB 4 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 9C3D _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall 'P 2ac 2ab' _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 9C3D _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 1.97 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 42.39 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? _exptl_crystal.pdbx_mosaic_method ? _exptl_crystal.pdbx_mosaic_block_size ? _exptl_crystal.pdbx_mosaic_block_size_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 7.5 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '30% w/v PEG4000' _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.temp 289 # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS PILATUS 6M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2024-05-10 _diffrn_detector.pdbx_frequency ? _diffrn_detector.id ? _diffrn_detector.number_of_axes ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97946 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'SSRL BEAMLINE BL9-2' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.97946 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline BL9-2 _diffrn_source.pdbx_synchrotron_site SSRL # _reflns.B_iso_Wilson_estimate 29.69 _reflns.entry_id 9C3D _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.85 _reflns.d_resolution_low 50 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 18637 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 98.3 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 11.9 _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 26.0 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all 0.124 _reflns.pdbx_Rpim_I_all 0.035 _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 1.0 _reflns.pdbx_CC_star ? _reflns.pdbx_R_split ? _reflns.pdbx_Rmerge_I_obs 0.119 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_CC_split_method ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_1 ? _reflns.pdbx_aniso_diffraction_limit_2 ? _reflns.pdbx_aniso_diffraction_limit_3 ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvalue_1 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_2 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_3 ? _reflns.pdbx_orthogonalization_convention ? _reflns.pdbx_percent_possible_ellipsoidal ? _reflns.pdbx_percent_possible_spherical ? _reflns.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns.pdbx_percent_possible_spherical_anomalous ? _reflns.pdbx_redundancy_anomalous ? _reflns.pdbx_CC_half_anomalous ? _reflns.pdbx_absDiff_over_sigma_anomalous ? _reflns.pdbx_percent_possible_anomalous ? _reflns.pdbx_observed_signal_threshold ? _reflns.pdbx_signal_type ? _reflns.pdbx_signal_details ? _reflns.pdbx_signal_software_id ? # _reflns_shell.d_res_high 1.85 _reflns_shell.d_res_low 1.88 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs 1.16 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 827 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy 9.1 _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all 1.227 _reflns_shell.pdbx_Rpim_I_all 0.387 _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half 0.60 _reflns_shell.pdbx_CC_star ? _reflns_shell.pdbx_R_split ? _reflns_shell.percent_possible_all 89.8 _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs 1.159 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_percent_possible_ellipsoidal ? _reflns_shell.pdbx_percent_possible_spherical ? _reflns_shell.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns_shell.pdbx_percent_possible_spherical_anomalous ? _reflns_shell.pdbx_redundancy_anomalous ? _reflns_shell.pdbx_CC_half_anomalous ? _reflns_shell.pdbx_absDiff_over_sigma_anomalous ? _reflns_shell.pdbx_percent_possible_anomalous ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean 36.99 _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 9C3D _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 1.85 _refine.ls_d_res_low 47.20 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 18578 _refine.ls_number_reflns_R_free 952 _refine.ls_number_reflns_R_work 17626 _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 97.99 _refine.ls_percent_reflns_R_free 5.12 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1889 _refine.ls_R_factor_R_free 0.2111 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.1877 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.35 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values 'GeoStd + Monomer Library + CDL v1.2' _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.1000 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.9000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 23.7503 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.2618 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.details ? _refine_hist.d_res_high 1.85 _refine_hist.d_res_low 47.20 _refine_hist.number_atoms_solvent 130 _refine_hist.number_atoms_total 1878 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total ? _refine_hist.pdbx_B_iso_mean_ligand ? _refine_hist.pdbx_B_iso_mean_solvent ? _refine_hist.pdbx_number_atoms_protein 1746 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 2 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.0065 ? 1810 ? f_bond_d ? ? 'X-RAY DIFFRACTION' ? 0.8743 ? 2456 ? f_angle_d ? ? 'X-RAY DIFFRACTION' ? 0.0604 ? 273 ? f_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.0063 ? 318 ? f_plane_restr ? ? 'X-RAY DIFFRACTION' ? 12.2944 ? 655 ? f_dihedral_angle_d ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_R_complete _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free _refine_ls_shell.R_factor_R_free 'X-RAY DIFFRACTION' 1.85 1.94 . . 118 2297 90.48 . . . . 0.2939 . . . . . . . . . . . 0.3464 'X-RAY DIFFRACTION' 1.94 2.06 . . 129 2475 98.04 . . . . 0.2332 . . . . . . . . . . . 0.2903 'X-RAY DIFFRACTION' 2.06 2.22 . . 150 2515 99.70 . . . . 0.1993 . . . . . . . . . . . 0.2523 'X-RAY DIFFRACTION' 2.22 2.45 . . 140 2522 99.78 . . . . 0.1969 . . . . . . . . . . . 0.2733 'X-RAY DIFFRACTION' 2.45 2.80 . . 127 2558 99.15 . . . . 0.1917 . . . . . . . . . . . 0.2100 'X-RAY DIFFRACTION' 2.80 3.53 . . 138 2576 99.67 . . . . 0.1975 . . . . . . . . . . . 0.2405 'X-RAY DIFFRACTION' 3.53 47.20 . . 150 2683 98.99 . . . . 0.1609 . . . . . . . . . . . 0.1600 # _struct.entry_id 9C3D _struct.title 'Crystal structure of metallo-beta-lactamase superfamily protein CcrA-like_MBL-B1 from Dyadobacter fermentans' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 9C3D _struct_keywords.text ;metallo-beta-lacatamase, CcrA-like_MBL, antibiotic-resistance, Structural Genomics, Center for Structural Biology of Infectious Diseases, CSBID, HYDROLASE ; _struct_keywords.pdbx_keywords HYDROLASE # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 3 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code C6W709_DYAFD _struct_ref.pdbx_db_accession C6W709 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;QTPDKSFKTDDLIVQKLTDHTYQHLTYLQTQTFGKVPCNGLIVFDGGEAVIFDTPADDATSEKVIRWVEDSLKCKVKAVI ATHFHEDCVGGLKAFHEHGIPSYATNKTIAFDKEHKFPVPQKGFDNKLELNVGTKPVVAAFYGEGHTRDNIIGYFPSEKV MFGGCLIKEVDATKGNLADANVDVWPATVANIRKQYSDVKVVIPGHGKIGGSELLDYTIKLFSQK ; _struct_ref.pdbx_align_begin 20 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 9C3D _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 225 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession C6W709 _struct_ref_seq.db_align_beg 20 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 244 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 20 _struct_ref_seq.pdbx_auth_seq_align_end 244 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 220 ? 1 MORE -77 ? 1 'SSA (A^2)' 9970 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 ASP A 57 ? SER A 71 ? ASP A 76 SER A 90 1 ? 15 HELX_P HELX_P2 AA2 HIS A 85 ? GLY A 90 ? HIS A 104 GLY A 109 1 ? 6 HELX_P HELX_P3 AA3 GLY A 91 ? HIS A 98 ? GLY A 110 HIS A 117 1 ? 8 HELX_P HELX_P4 AA4 ASN A 106 ? LYS A 116 ? ASN A 125 LYS A 135 1 ? 11 HELX_P HELX_P5 AA5 CYS A 165 ? ILE A 167 ? CYS A 184 ILE A 186 5 ? 3 HELX_P HELX_P6 AA6 VAL A 184 ? TYR A 196 ? VAL A 203 TYR A 215 1 ? 13 HELX_P HELX_P7 AA7 SER A 212 ? GLN A 224 ? SER A 231 GLN A 243 1 ? 13 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A HIS 83 NE2 ? ? ? 1_555 B ZN . ZN ? ? A HIS 102 A ZN 301 1_555 ? ? ? ? ? ? ? 2.285 ? ? metalc2 metalc ? ? A HIS 85 ND1 ? ? ? 1_555 B ZN . ZN ? ? A HIS 104 A ZN 301 1_555 ? ? ? ? ? ? ? 2.244 ? ? metalc3 metalc ? ? A ASP 87 OD2 ? ? ? 1_555 C ZN . ZN ? ? A ASP 106 A ZN 302 1_555 ? ? ? ? ? ? ? 2.333 ? ? metalc4 metalc ? ? A HIS 146 NE2 ? ? ? 1_555 B ZN . ZN ? ? A HIS 165 A ZN 301 1_555 ? ? ? ? ? ? ? 2.231 ? ? metalc5 metalc ? ? A CYS 165 SG ? ? ? 1_555 C ZN . ZN ? ? A CYS 184 A ZN 302 1_555 ? ? ? ? ? ? ? 2.256 ? ? metalc6 metalc ? ? A HIS 206 NE2 ? ? ? 1_555 C ZN . ZN ? ? A HIS 225 A ZN 302 1_555 ? ? ? ? ? ? ? 2.292 ? ? metalc7 metalc ? ? B ZN . ZN ? ? ? 1_555 D HOH . O ? ? A ZN 301 A HOH 409 1_555 ? ? ? ? ? ? ? 1.872 ? ? metalc8 metalc ? ? C ZN . ZN ? ? ? 1_555 D HOH . O ? ? A ZN 302 A HOH 409 1_555 ? ? ? ? ? ? ? 2.092 ? ? metalc9 metalc ? ? C ZN . ZN ? ? ? 1_555 D HOH . O ? ? A ZN 302 A HOH 492 1_555 ? ? ? ? ? ? ? 2.367 ? ? # _struct_conn_type.id metalc _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 NE2 ? A HIS 83 ? A HIS 102 ? 1_555 ZN ? B ZN . ? A ZN 301 ? 1_555 ND1 ? A HIS 85 ? A HIS 104 ? 1_555 92.6 ? 2 NE2 ? A HIS 83 ? A HIS 102 ? 1_555 ZN ? B ZN . ? A ZN 301 ? 1_555 NE2 ? A HIS 146 ? A HIS 165 ? 1_555 112.7 ? 3 ND1 ? A HIS 85 ? A HIS 104 ? 1_555 ZN ? B ZN . ? A ZN 301 ? 1_555 NE2 ? A HIS 146 ? A HIS 165 ? 1_555 107.3 ? 4 NE2 ? A HIS 83 ? A HIS 102 ? 1_555 ZN ? B ZN . ? A ZN 301 ? 1_555 O ? D HOH . ? A HOH 409 ? 1_555 110.9 ? 5 ND1 ? A HIS 85 ? A HIS 104 ? 1_555 ZN ? B ZN . ? A ZN 301 ? 1_555 O ? D HOH . ? A HOH 409 ? 1_555 115.1 ? 6 NE2 ? A HIS 146 ? A HIS 165 ? 1_555 ZN ? B ZN . ? A ZN 301 ? 1_555 O ? D HOH . ? A HOH 409 ? 1_555 115.9 ? 7 OD2 ? A ASP 87 ? A ASP 106 ? 1_555 ZN ? C ZN . ? A ZN 302 ? 1_555 SG ? A CYS 165 ? A CYS 184 ? 1_555 89.4 ? 8 OD2 ? A ASP 87 ? A ASP 106 ? 1_555 ZN ? C ZN . ? A ZN 302 ? 1_555 NE2 ? A HIS 206 ? A HIS 225 ? 1_555 92.7 ? 9 SG ? A CYS 165 ? A CYS 184 ? 1_555 ZN ? C ZN . ? A ZN 302 ? 1_555 NE2 ? A HIS 206 ? A HIS 225 ? 1_555 102.8 ? 10 OD2 ? A ASP 87 ? A ASP 106 ? 1_555 ZN ? C ZN . ? A ZN 302 ? 1_555 O ? D HOH . ? A HOH 409 ? 1_555 81.0 ? 11 SG ? A CYS 165 ? A CYS 184 ? 1_555 ZN ? C ZN . ? A ZN 302 ? 1_555 O ? D HOH . ? A HOH 409 ? 1_555 113.1 ? 12 NE2 ? A HIS 206 ? A HIS 225 ? 1_555 ZN ? C ZN . ? A ZN 302 ? 1_555 O ? D HOH . ? A HOH 409 ? 1_555 143.4 ? 13 OD2 ? A ASP 87 ? A ASP 106 ? 1_555 ZN ? C ZN . ? A ZN 302 ? 1_555 O ? D HOH . ? A HOH 492 ? 1_555 169.2 ? 14 SG ? A CYS 165 ? A CYS 184 ? 1_555 ZN ? C ZN . ? A ZN 302 ? 1_555 O ? D HOH . ? A HOH 492 ? 1_555 97.8 ? 15 NE2 ? A HIS 206 ? A HIS 225 ? 1_555 ZN ? C ZN . ? A ZN 302 ? 1_555 O ? D HOH . ? A HOH 492 ? 1_555 77.9 ? 16 O ? D HOH . ? A HOH 409 ? 1_555 ZN ? C ZN . ? A ZN 302 ? 1_555 O ? D HOH . ? A HOH 492 ? 1_555 103.2 ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 8 ? AA2 ? 5 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel AA1 4 5 ? anti-parallel AA1 5 6 ? parallel AA1 6 7 ? parallel AA1 7 8 ? parallel AA2 1 2 ? anti-parallel AA2 2 3 ? anti-parallel AA2 3 4 ? anti-parallel AA2 4 5 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 PHE A 7 ? LYS A 8 ? PHE A 26 LYS A 27 AA1 2 ILE A 13 ? THR A 18 ? ILE A 32 THR A 37 AA1 3 THR A 21 ? THR A 30 ? THR A 40 THR A 49 AA1 4 GLY A 34 ? ASP A 45 ? GLY A 53 ASP A 64 AA1 5 GLU A 48 ? PHE A 52 ? GLU A 67 PHE A 71 AA1 6 LYS A 75 ? ILE A 80 ? LYS A 94 ILE A 99 AA1 7 SER A 102 ? THR A 105 ? SER A 121 THR A 124 AA1 8 LYS A 122 ? PHE A 124 ? LYS A 141 PHE A 143 AA2 1 LYS A 127 ? VAL A 132 ? LYS A 146 VAL A 151 AA2 2 LYS A 135 ? ALA A 140 ? LYS A 154 ALA A 159 AA2 3 ILE A 152 ? PHE A 155 ? ILE A 171 PHE A 174 AA2 4 VAL A 160 ? GLY A 164 ? VAL A 179 GLY A 183 AA2 5 VAL A 201 ? PRO A 204 ? VAL A 220 PRO A 223 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N PHE A 7 ? N PHE A 26 O VAL A 14 ? O VAL A 33 AA1 2 3 N GLN A 15 ? N GLN A 34 O GLN A 23 ? O GLN A 42 AA1 3 4 N THR A 26 ? N THR A 45 O CYS A 38 ? O CYS A 57 AA1 4 5 N LEU A 41 ? N LEU A 60 O PHE A 52 ? O PHE A 71 AA1 5 6 N ALA A 49 ? N ALA A 68 O LYS A 77 ? O LYS A 96 AA1 6 7 N VAL A 79 ? N VAL A 98 O TYR A 103 ? O TYR A 122 AA1 7 8 N SER A 102 ? N SER A 121 O LYS A 122 ? O LYS A 141 AA2 1 2 N VAL A 132 ? N VAL A 151 O LYS A 135 ? O LYS A 154 AA2 2 3 N VAL A 138 ? N VAL A 157 O TYR A 154 ? O TYR A 173 AA2 3 4 N GLY A 153 ? N GLY A 172 O PHE A 162 ? O PHE A 181 AA2 4 5 N MET A 161 ? N MET A 180 O VAL A 201 ? O VAL A 220 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASP A 72 ? ? 69.24 135.04 2 1 ASN A 145 ? ? 62.14 -38.14 # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name 'NIAID, National Institute of Allergy and Infectious Diseases' _pdbx_SG_project.full_name_of_center 'Center for Structural Biology of Infectious Diseases' _pdbx_SG_project.initial_of_center CSBID # loop_ _space_group_symop.id _space_group_symop.operation_xyz 1 x,y,z 2 x+1/2,-y+1/2,-z 3 -x,y+1/2,-z+1/2 4 -x+1/2,-y,z+1/2 # loop_ _pdbx_refine_tls.id _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[1][1]_esd _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][2]_esd _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[1][3]_esd _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[2][2]_esd _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.T[2][3]_esd _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[3][3]_esd _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[1][1]_esd _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][2]_esd _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[1][3]_esd _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[2][2]_esd _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.L[2][3]_esd _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[3][3]_esd _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][1]_esd _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][2]_esd _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[1][3]_esd _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][1]_esd _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][2]_esd _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][3]_esd _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][1]_esd _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][2]_esd _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[3][3]_esd 1 'X-RAY DIFFRACTION' ? refined -13.6767141388 -6.07648361245 -4.7404451406 0.320403453199 ? 0.0341489789526 ? 0.0878657952318 ? 0.195844468234 ? -0.0165868116407 ? 0.25206287129 ? 5.60586525346 ? -1.1728467749 ? 0.990123989816 ? 5.04290338095 ? -0.371334167922 ? 6.97562542201 ? -0.119441214277 ? -0.481095443994 ? -0.339548085667 ? 0.532876443532 ? -0.00596164212663 ? 0.27927010136 ? 0.410763775987 ? 0.0460986474831 ? 0.102462355242 ? 2 'X-RAY DIFFRACTION' ? refined -9.48969083591 3.98538842076 -10.9431802234 0.21652074177 ? 0.0128359262781 ? -0.00678261909029 ? 0.255943391252 ? 0.000978751062447 ? 0.19577517119 ? 1.67317830343 ? -0.767624254607 ? -0.624739586323 ? 3.7963645766 ? 1.36887740173 ? 2.04704681174 ? -0.0126237176225 ? 0.077308929839 ? -0.121883737052 ? -0.165862022696 ? -0.00962960006983 ? 0.00867300829968 ? 0.10641680357 ? 0.0559590885386 ? 0.0171155878783 ? # loop_ _pdbx_refine_tls_group.id _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_PDB_ins_code _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_PDB_ins_code _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 1 'X-RAY DIFFRACTION' 1 A 1 A 20 ? A 57 A 76 ? ? ;chain 'A' and (resid 20 through 76 ) ; 2 'X-RAY DIFFRACTION' 2 A 58 A 77 ? A 224 A 243 ? ? ;chain 'A' and (resid 77 through 243 ) ; # _pdbx_entry_details.entry_id 9C3D _pdbx_entry_details.has_ligand_of_interest Y _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? # _pdbx_unobs_or_zero_occ_residues.id 1 _pdbx_unobs_or_zero_occ_residues.PDB_model_num 1 _pdbx_unobs_or_zero_occ_residues.polymer_flag Y _pdbx_unobs_or_zero_occ_residues.occupancy_flag 1 _pdbx_unobs_or_zero_occ_residues.auth_asym_id A _pdbx_unobs_or_zero_occ_residues.auth_comp_id LYS _pdbx_unobs_or_zero_occ_residues.auth_seq_id 244 _pdbx_unobs_or_zero_occ_residues.PDB_ins_code ? _pdbx_unobs_or_zero_occ_residues.label_asym_id A _pdbx_unobs_or_zero_occ_residues.label_comp_id LYS _pdbx_unobs_or_zero_occ_residues.label_seq_id 225 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 HIS N N N N 137 HIS CA C N S 138 HIS C C N N 139 HIS O O N N 140 HIS CB C N N 141 HIS CG C Y N 142 HIS ND1 N Y N 143 HIS CD2 C Y N 144 HIS CE1 C Y N 145 HIS NE2 N Y N 146 HIS OXT O N N 147 HIS H H N N 148 HIS H2 H N N 149 HIS HA H N N 150 HIS HB2 H N N 151 HIS HB3 H N N 152 HIS HD1 H N N 153 HIS HD2 H N N 154 HIS HE1 H N N 155 HIS HE2 H N N 156 HIS HXT H N N 157 HOH O O N N 158 HOH H1 H N N 159 HOH H2 H N N 160 ILE N N N N 161 ILE CA C N S 162 ILE C C N N 163 ILE O O N N 164 ILE CB C N S 165 ILE CG1 C N N 166 ILE CG2 C N N 167 ILE CD1 C N N 168 ILE OXT O N N 169 ILE H H N N 170 ILE H2 H N N 171 ILE HA H N N 172 ILE HB H N N 173 ILE HG12 H N N 174 ILE HG13 H N N 175 ILE HG21 H N N 176 ILE HG22 H N N 177 ILE HG23 H N N 178 ILE HD11 H N N 179 ILE HD12 H N N 180 ILE HD13 H N N 181 ILE HXT H N N 182 LEU N N N N 183 LEU CA C N S 184 LEU C C N N 185 LEU O O N N 186 LEU CB C N N 187 LEU CG C N N 188 LEU CD1 C N N 189 LEU CD2 C N N 190 LEU OXT O N N 191 LEU H H N N 192 LEU H2 H N N 193 LEU HA H N N 194 LEU HB2 H N N 195 LEU HB3 H N N 196 LEU HG H N N 197 LEU HD11 H N N 198 LEU HD12 H N N 199 LEU HD13 H N N 200 LEU HD21 H N N 201 LEU HD22 H N N 202 LEU HD23 H N N 203 LEU HXT H N N 204 LYS N N N N 205 LYS CA C N S 206 LYS C C N N 207 LYS O O N N 208 LYS CB C N N 209 LYS CG C N N 210 LYS CD C N N 211 LYS CE C N N 212 LYS NZ N N N 213 LYS OXT O N N 214 LYS H H N N 215 LYS H2 H N N 216 LYS HA H N N 217 LYS HB2 H N N 218 LYS HB3 H N N 219 LYS HG2 H N N 220 LYS HG3 H N N 221 LYS HD2 H N N 222 LYS HD3 H N N 223 LYS HE2 H N N 224 LYS HE3 H N N 225 LYS HZ1 H N N 226 LYS HZ2 H N N 227 LYS HZ3 H N N 228 LYS HXT H N N 229 MET N N N N 230 MET CA C N S 231 MET C C N N 232 MET O O N N 233 MET CB C N N 234 MET CG C N N 235 MET SD S N N 236 MET CE C N N 237 MET OXT O N N 238 MET H H N N 239 MET H2 H N N 240 MET HA H N N 241 MET HB2 H N N 242 MET HB3 H N N 243 MET HG2 H N N 244 MET HG3 H N N 245 MET HE1 H N N 246 MET HE2 H N N 247 MET HE3 H N N 248 MET HXT H N N 249 PHE N N N N 250 PHE CA C N S 251 PHE C C N N 252 PHE O O N N 253 PHE CB C N N 254 PHE CG C Y N 255 PHE CD1 C Y N 256 PHE CD2 C Y N 257 PHE CE1 C Y N 258 PHE CE2 C Y N 259 PHE CZ C Y N 260 PHE OXT O N N 261 PHE H H N N 262 PHE H2 H N N 263 PHE HA H N N 264 PHE HB2 H N N 265 PHE HB3 H N N 266 PHE HD1 H N N 267 PHE HD2 H N N 268 PHE HE1 H N N 269 PHE HE2 H N N 270 PHE HZ H N N 271 PHE HXT H N N 272 PRO N N N N 273 PRO CA C N S 274 PRO C C N N 275 PRO O O N N 276 PRO CB C N N 277 PRO CG C N N 278 PRO CD C N N 279 PRO OXT O N N 280 PRO H H N N 281 PRO HA H N N 282 PRO HB2 H N N 283 PRO HB3 H N N 284 PRO HG2 H N N 285 PRO HG3 H N N 286 PRO HD2 H N N 287 PRO HD3 H N N 288 PRO HXT H N N 289 SER N N N N 290 SER CA C N S 291 SER C C N N 292 SER O O N N 293 SER CB C N N 294 SER OG O N N 295 SER OXT O N N 296 SER H H N N 297 SER H2 H N N 298 SER HA H N N 299 SER HB2 H N N 300 SER HB3 H N N 301 SER HG H N N 302 SER HXT H N N 303 THR N N N N 304 THR CA C N S 305 THR C C N N 306 THR O O N N 307 THR CB C N R 308 THR OG1 O N N 309 THR CG2 C N N 310 THR OXT O N N 311 THR H H N N 312 THR H2 H N N 313 THR HA H N N 314 THR HB H N N 315 THR HG1 H N N 316 THR HG21 H N N 317 THR HG22 H N N 318 THR HG23 H N N 319 THR HXT H N N 320 TRP N N N N 321 TRP CA C N S 322 TRP C C N N 323 TRP O O N N 324 TRP CB C N N 325 TRP CG C Y N 326 TRP CD1 C Y N 327 TRP CD2 C Y N 328 TRP NE1 N Y N 329 TRP CE2 C Y N 330 TRP CE3 C Y N 331 TRP CZ2 C Y N 332 TRP CZ3 C Y N 333 TRP CH2 C Y N 334 TRP OXT O N N 335 TRP H H N N 336 TRP H2 H N N 337 TRP HA H N N 338 TRP HB2 H N N 339 TRP HB3 H N N 340 TRP HD1 H N N 341 TRP HE1 H N N 342 TRP HE3 H N N 343 TRP HZ2 H N N 344 TRP HZ3 H N N 345 TRP HH2 H N N 346 TRP HXT H N N 347 TYR N N N N 348 TYR CA C N S 349 TYR C C N N 350 TYR O O N N 351 TYR CB C N N 352 TYR CG C Y N 353 TYR CD1 C Y N 354 TYR CD2 C Y N 355 TYR CE1 C Y N 356 TYR CE2 C Y N 357 TYR CZ C Y N 358 TYR OH O N N 359 TYR OXT O N N 360 TYR H H N N 361 TYR H2 H N N 362 TYR HA H N N 363 TYR HB2 H N N 364 TYR HB3 H N N 365 TYR HD1 H N N 366 TYR HD2 H N N 367 TYR HE1 H N N 368 TYR HE2 H N N 369 TYR HH H N N 370 TYR HXT H N N 371 VAL N N N N 372 VAL CA C N S 373 VAL C C N N 374 VAL O O N N 375 VAL CB C N N 376 VAL CG1 C N N 377 VAL CG2 C N N 378 VAL OXT O N N 379 VAL H H N N 380 VAL H2 H N N 381 VAL HA H N N 382 VAL HB H N N 383 VAL HG11 H N N 384 VAL HG12 H N N 385 VAL HG13 H N N 386 VAL HG21 H N N 387 VAL HG22 H N N 388 VAL HG23 H N N 389 VAL HXT H N N 390 ZN ZN ZN N N 391 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 HOH O H1 sing N N 150 HOH O H2 sing N N 151 ILE N CA sing N N 152 ILE N H sing N N 153 ILE N H2 sing N N 154 ILE CA C sing N N 155 ILE CA CB sing N N 156 ILE CA HA sing N N 157 ILE C O doub N N 158 ILE C OXT sing N N 159 ILE CB CG1 sing N N 160 ILE CB CG2 sing N N 161 ILE CB HB sing N N 162 ILE CG1 CD1 sing N N 163 ILE CG1 HG12 sing N N 164 ILE CG1 HG13 sing N N 165 ILE CG2 HG21 sing N N 166 ILE CG2 HG22 sing N N 167 ILE CG2 HG23 sing N N 168 ILE CD1 HD11 sing N N 169 ILE CD1 HD12 sing N N 170 ILE CD1 HD13 sing N N 171 ILE OXT HXT sing N N 172 LEU N CA sing N N 173 LEU N H sing N N 174 LEU N H2 sing N N 175 LEU CA C sing N N 176 LEU CA CB sing N N 177 LEU CA HA sing N N 178 LEU C O doub N N 179 LEU C OXT sing N N 180 LEU CB CG sing N N 181 LEU CB HB2 sing N N 182 LEU CB HB3 sing N N 183 LEU CG CD1 sing N N 184 LEU CG CD2 sing N N 185 LEU CG HG sing N N 186 LEU CD1 HD11 sing N N 187 LEU CD1 HD12 sing N N 188 LEU CD1 HD13 sing N N 189 LEU CD2 HD21 sing N N 190 LEU CD2 HD22 sing N N 191 LEU CD2 HD23 sing N N 192 LEU OXT HXT sing N N 193 LYS N CA sing N N 194 LYS N H sing N N 195 LYS N H2 sing N N 196 LYS CA C sing N N 197 LYS CA CB sing N N 198 LYS CA HA sing N N 199 LYS C O doub N N 200 LYS C OXT sing N N 201 LYS CB CG sing N N 202 LYS CB HB2 sing N N 203 LYS CB HB3 sing N N 204 LYS CG CD sing N N 205 LYS CG HG2 sing N N 206 LYS CG HG3 sing N N 207 LYS CD CE sing N N 208 LYS CD HD2 sing N N 209 LYS CD HD3 sing N N 210 LYS CE NZ sing N N 211 LYS CE HE2 sing N N 212 LYS CE HE3 sing N N 213 LYS NZ HZ1 sing N N 214 LYS NZ HZ2 sing N N 215 LYS NZ HZ3 sing N N 216 LYS OXT HXT sing N N 217 MET N CA sing N N 218 MET N H sing N N 219 MET N H2 sing N N 220 MET CA C sing N N 221 MET CA CB sing N N 222 MET CA HA sing N N 223 MET C O doub N N 224 MET C OXT sing N N 225 MET CB CG sing N N 226 MET CB HB2 sing N N 227 MET CB HB3 sing N N 228 MET CG SD sing N N 229 MET CG HG2 sing N N 230 MET CG HG3 sing N N 231 MET SD CE sing N N 232 MET CE HE1 sing N N 233 MET CE HE2 sing N N 234 MET CE HE3 sing N N 235 MET OXT HXT sing N N 236 PHE N CA sing N N 237 PHE N H sing N N 238 PHE N H2 sing N N 239 PHE CA C sing N N 240 PHE CA CB sing N N 241 PHE CA HA sing N N 242 PHE C O doub N N 243 PHE C OXT sing N N 244 PHE CB CG sing N N 245 PHE CB HB2 sing N N 246 PHE CB HB3 sing N N 247 PHE CG CD1 doub Y N 248 PHE CG CD2 sing Y N 249 PHE CD1 CE1 sing Y N 250 PHE CD1 HD1 sing N N 251 PHE CD2 CE2 doub Y N 252 PHE CD2 HD2 sing N N 253 PHE CE1 CZ doub Y N 254 PHE CE1 HE1 sing N N 255 PHE CE2 CZ sing Y N 256 PHE CE2 HE2 sing N N 257 PHE CZ HZ sing N N 258 PHE OXT HXT sing N N 259 PRO N CA sing N N 260 PRO N CD sing N N 261 PRO N H sing N N 262 PRO CA C sing N N 263 PRO CA CB sing N N 264 PRO CA HA sing N N 265 PRO C O doub N N 266 PRO C OXT sing N N 267 PRO CB CG sing N N 268 PRO CB HB2 sing N N 269 PRO CB HB3 sing N N 270 PRO CG CD sing N N 271 PRO CG HG2 sing N N 272 PRO CG HG3 sing N N 273 PRO CD HD2 sing N N 274 PRO CD HD3 sing N N 275 PRO OXT HXT sing N N 276 SER N CA sing N N 277 SER N H sing N N 278 SER N H2 sing N N 279 SER CA C sing N N 280 SER CA CB sing N N 281 SER CA HA sing N N 282 SER C O doub N N 283 SER C OXT sing N N 284 SER CB OG sing N N 285 SER CB HB2 sing N N 286 SER CB HB3 sing N N 287 SER OG HG sing N N 288 SER OXT HXT sing N N 289 THR N CA sing N N 290 THR N H sing N N 291 THR N H2 sing N N 292 THR CA C sing N N 293 THR CA CB sing N N 294 THR CA HA sing N N 295 THR C O doub N N 296 THR C OXT sing N N 297 THR CB OG1 sing N N 298 THR CB CG2 sing N N 299 THR CB HB sing N N 300 THR OG1 HG1 sing N N 301 THR CG2 HG21 sing N N 302 THR CG2 HG22 sing N N 303 THR CG2 HG23 sing N N 304 THR OXT HXT sing N N 305 TRP N CA sing N N 306 TRP N H sing N N 307 TRP N H2 sing N N 308 TRP CA C sing N N 309 TRP CA CB sing N N 310 TRP CA HA sing N N 311 TRP C O doub N N 312 TRP C OXT sing N N 313 TRP CB CG sing N N 314 TRP CB HB2 sing N N 315 TRP CB HB3 sing N N 316 TRP CG CD1 doub Y N 317 TRP CG CD2 sing Y N 318 TRP CD1 NE1 sing Y N 319 TRP CD1 HD1 sing N N 320 TRP CD2 CE2 doub Y N 321 TRP CD2 CE3 sing Y N 322 TRP NE1 CE2 sing Y N 323 TRP NE1 HE1 sing N N 324 TRP CE2 CZ2 sing Y N 325 TRP CE3 CZ3 doub Y N 326 TRP CE3 HE3 sing N N 327 TRP CZ2 CH2 doub Y N 328 TRP CZ2 HZ2 sing N N 329 TRP CZ3 CH2 sing Y N 330 TRP CZ3 HZ3 sing N N 331 TRP CH2 HH2 sing N N 332 TRP OXT HXT sing N N 333 TYR N CA sing N N 334 TYR N H sing N N 335 TYR N H2 sing N N 336 TYR CA C sing N N 337 TYR CA CB sing N N 338 TYR CA HA sing N N 339 TYR C O doub N N 340 TYR C OXT sing N N 341 TYR CB CG sing N N 342 TYR CB HB2 sing N N 343 TYR CB HB3 sing N N 344 TYR CG CD1 doub Y N 345 TYR CG CD2 sing Y N 346 TYR CD1 CE1 sing Y N 347 TYR CD1 HD1 sing N N 348 TYR CD2 CE2 doub Y N 349 TYR CD2 HD2 sing N N 350 TYR CE1 CZ doub Y N 351 TYR CE1 HE1 sing N N 352 TYR CE2 CZ sing Y N 353 TYR CE2 HE2 sing N N 354 TYR CZ OH sing N N 355 TYR OH HH sing N N 356 TYR OXT HXT sing N N 357 VAL N CA sing N N 358 VAL N H sing N N 359 VAL N H2 sing N N 360 VAL CA C sing N N 361 VAL CA CB sing N N 362 VAL CA HA sing N N 363 VAL C O doub N N 364 VAL C OXT sing N N 365 VAL CB CG1 sing N N 366 VAL CB CG2 sing N N 367 VAL CB HB sing N N 368 VAL CG1 HG11 sing N N 369 VAL CG1 HG12 sing N N 370 VAL CG1 HG13 sing N N 371 VAL CG2 HG21 sing N N 372 VAL CG2 HG22 sing N N 373 VAL CG2 HG23 sing N N 374 VAL OXT HXT sing N N 375 # _pdbx_audit_support.funding_organization 'National Institutes of Health/National Institute Of Allergy and Infectious Diseases (NIH/NIAID)' _pdbx_audit_support.country 'United States' _pdbx_audit_support.grant_number ? _pdbx_audit_support.ordinal 1 # _pdbx_entity_instance_feature.ordinal 1 _pdbx_entity_instance_feature.comp_id ZN _pdbx_entity_instance_feature.asym_id ? _pdbx_entity_instance_feature.seq_num ? _pdbx_entity_instance_feature.auth_comp_id ZN _pdbx_entity_instance_feature.auth_asym_id ? _pdbx_entity_instance_feature.auth_seq_num ? _pdbx_entity_instance_feature.feature_type 'SUBJECT OF INVESTIGATION' _pdbx_entity_instance_feature.details ? # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'in silico model' _pdbx_initial_refinement_model.source_name AlphaFold _pdbx_initial_refinement_model.accession_code ? _pdbx_initial_refinement_model.details ? # _space_group.name_H-M_alt 'P 21 21 21' _space_group.name_Hall 'P 2ac 2ab' _space_group.IT_number 19 _space_group.crystal_system orthorhombic _space_group.id 1 # _atom_sites.entry_id 9C3D _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.Cartn_transform_axes ? _atom_sites.fract_transf_matrix[1][1] 0.021197 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.016063 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.013815 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol _atom_type.scat_dispersion_real _atom_type.scat_dispersion_imag _atom_type.scat_Cromer_Mann_a1 _atom_type.scat_Cromer_Mann_a2 _atom_type.scat_Cromer_Mann_a3 _atom_type.scat_Cromer_Mann_a4 _atom_type.scat_Cromer_Mann_b1 _atom_type.scat_Cromer_Mann_b2 _atom_type.scat_Cromer_Mann_b3 _atom_type.scat_Cromer_Mann_b4 _atom_type.scat_Cromer_Mann_c _atom_type.scat_source _atom_type.scat_dispersion_source C ? ? 3.54356 2.42580 ? ? 25.62398 1.50364 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? N ? ? 4.01032 2.96436 ? ? 19.97189 1.75589 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? O ? ? 4.49882 3.47563 ? ? 15.80542 1.70748 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? S ? ? 9.55732 6.39887 ? ? 1.23737 29.19336 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? ZN ? ? 24.64596 5.25405 ? ? 2.14387 29.76375 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? # loop_