HEADER TRANSFERASE/DNA 05-JUN-24 9C53 TITLE CRYO-EM STRUCTURE OF THE STRAND DISPLACEMENT COMPLEX (II) OF YEAST TITLE 2 MITOCHONDRIAL DNA POLYMERASE GAMMA (MIP1) WITH DOWNSTREAM DNA COMPND MOL_ID: 1; COMPND 2 MOLECULE: DNA POLYMERASE GAMMA; COMPND 3 CHAIN: A; COMPND 4 EC: 2.7.7.7; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: NON-TEMPLATE DNA; COMPND 8 CHAIN: N; COMPND 9 ENGINEERED: YES; COMPND 10 MOL_ID: 3; COMPND 11 MOLECULE: PRIMER DNA; COMPND 12 CHAIN: P; COMPND 13 ENGINEERED: YES; COMPND 14 MOL_ID: 4; COMPND 15 MOLECULE: TEMPLATE DNA; COMPND 16 CHAIN: T; COMPND 17 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; SOURCE 3 ORGANISM_COMMON: BREWER'S YEAST; SOURCE 4 ORGANISM_TAXID: 4932; SOURCE 5 GENE: MIP1, GI527_G0005701; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 MOL_ID: 2; SOURCE 10 SYNTHETIC: YES; SOURCE 11 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 12 ORGANISM_TAXID: 32630; SOURCE 13 MOL_ID: 3; SOURCE 14 SYNTHETIC: YES; SOURCE 15 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 16 ORGANISM_TAXID: 32630; SOURCE 17 MOL_ID: 4; SOURCE 18 SYNTHETIC: YES; SOURCE 19 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 20 ORGANISM_TAXID: 32630 KEYWDS MITOCHONDRIAL DNA POLYMERASE GAMMA, STRAND DISPLACEMENT COMPLEX, KEYWDS 2 MIP1, REPLICATION, HELICASE INDEPENDENT DNA POLYMERASE, TRANSFERASE- KEYWDS 3 DNA COMPLEX EXPDTA ELECTRON MICROSCOPY AUTHOR A.R.NAYAK,V.O.SOKOLOVA,S.SILLAMAA,J.SEDMEN,D.TEMIAKOV REVDAT 3 23-APR-25 9C53 1 TITLE REVDAT 2 26-MAR-25 9C53 1 JRNL REVDAT 1 19-MAR-25 9C53 0 JRNL AUTH A.R.NAYAK,V.SOKOLOVA,S.SILLAMAA,K.HERBINE,J.SEDMAN, JRNL AUTH 2 D.TEMIAKOV JRNL TITL STRUCTURAL BASIS FOR INTRINSIC STRAND DISPLACEMENT ACTIVITY JRNL TITL 2 OF MITOCHONDRIAL DNA POLYMERASE. JRNL REF NAT COMMUN V. 16 2417 2025 JRNL REFN ESSN 2041-1723 JRNL PMID 40069189 JRNL DOI 10.1038/S41467-025-57594-Z REMARK 2 REMARK 2 RESOLUTION. 2.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 SOFTWARE PACKAGES : EPU, COOT, CRYOSPARC, PHENIX REMARK 3 RECONSTRUCTION SCHEMA : NULL REMARK 3 REMARK 3 EM MAP-MODEL FITTING AND REFINEMENT REMARK 3 PDB ENTRY : NULL REMARK 3 REFINEMENT SPACE : REAL REMARK 3 REFINEMENT PROTOCOL : FLEXIBLE FIT REMARK 3 REFINEMENT TARGET : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE : NULL REMARK 3 REMARK 3 FITTING PROCEDURE : NULL REMARK 3 REMARK 3 EM IMAGE RECONSTRUCTION STATISTICS REMARK 3 NOMINAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 ACTUAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 EFFECTIVE RESOLUTION (ANGSTROMS) : 2.600 REMARK 3 NUMBER OF PARTICLES : 137107 REMARK 3 CTF CORRECTION METHOD : PHASE FLIPPING AND AMPLITUDE REMARK 3 CORRECTION REMARK 3 REMARK 3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: NULL REMARK 3 REMARK 3 OTHER DETAILS: NULL REMARK 4 REMARK 4 9C53 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 10-JUN-24. REMARK 100 THE DEPOSITION ID IS D_1000283037. REMARK 245 REMARK 245 EXPERIMENTAL DETAILS REMARK 245 RECONSTRUCTION METHOD : SINGLE PARTICLE REMARK 245 SPECIMEN TYPE : NULL REMARK 245 REMARK 245 ELECTRON MICROSCOPE SAMPLE REMARK 245 SAMPLE TYPE : PARTICLE REMARK 245 PARTICLE TYPE : POINT REMARK 245 NAME OF SAMPLE : CRYO-EM MAP OF THE STRAND REMARK 245 DISPLACEMENT COMPLEX (III) OF REMARK 245 YEAST MITOCHONDRIAL DNA REMARK 245 POLYMERASE GAMMA (MIP1) REMARK 245 SAMPLE CONCENTRATION (MG ML-1) : 0.57 REMARK 245 SAMPLE SUPPORT DETAILS : NULL REMARK 245 SAMPLE VITRIFICATION DETAILS : NULL REMARK 245 SAMPLE BUFFER : NULL REMARK 245 PH : 7.90 REMARK 245 SAMPLE DETAILS : YEAST MITOCHONDRIAL DNA REMARK 245 POLYMERASE GAMMA (MIP1)WILD-TYPE ASSEMBLED ON A PRIMER-TEMPLATE REMARK 245 AND A DOWNSTREAM NON-TEMPLATE STRAND WITH INCOMING NUCLEOTIDE, REMARK 245 DATP BOUND TO THE POLYMERASE SITE. REMARK 245 REMARK 245 DATA ACQUISITION REMARK 245 DATE OF EXPERIMENT : NULL REMARK 245 NUMBER OF MICROGRAPHS-IMAGES : 14819 REMARK 245 TEMPERATURE (KELVIN) : NULL REMARK 245 MICROSCOPE MODEL : FEI TITAN KRIOS REMARK 245 DETECTOR TYPE : FEI FALCON IV (4K X 4K) REMARK 245 MINIMUM DEFOCUS (NM) : 500.00 REMARK 245 MAXIMUM DEFOCUS (NM) : 1500.00 REMARK 245 MINIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 MAXIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 NOMINAL CS : 2.70 REMARK 245 IMAGING MODE : BRIGHT FIELD REMARK 245 ELECTRON DOSE (ELECTRONS NM**-2) : 6000.00 REMARK 245 ILLUMINATION MODE : FLOOD BEAM REMARK 245 NOMINAL MAGNIFICATION : 105000 REMARK 245 CALIBRATED MAGNIFICATION : NULL REMARK 245 SOURCE : FIELD EMISSION GUN REMARK 245 ACCELERATION VOLTAGE (KV) : 300 REMARK 245 IMAGING DETAILS : NULL REMARK 247 REMARK 247 ELECTRON MICROSCOPY REMARK 247 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON REMARK 247 MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE REMARK 247 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES REMARK 247 ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION REMARK 247 OF THE STRUCTURE FACTORS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, N, P, T REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 28 REMARK 465 ALA A 29 REMARK 465 SER A 30 REMARK 465 THR A 31 REMARK 465 LYS A 32 REMARK 465 LYS A 33 REMARK 465 ASN A 34 REMARK 465 LYS A 1046 REMARK 465 GLU A 1047 REMARK 465 TYR A 1048 REMARK 465 ALA A 1049 REMARK 465 ARG A 1050 REMARK 465 ASP A 1051 REMARK 465 GLY A 1052 REMARK 465 ASN A 1053 REMARK 465 THR A 1054 REMARK 465 ALA A 1055 REMARK 465 GLU A 1056 REMARK 465 TYR A 1057 REMARK 465 SER A 1058 REMARK 465 LEU A 1059 REMARK 465 LEU A 1060 REMARK 465 ASP A 1061 REMARK 465 TYR A 1062 REMARK 465 ILE A 1063 REMARK 465 LYS A 1064 REMARK 465 ASP A 1065 REMARK 465 VAL A 1066 REMARK 465 GLU A 1067 REMARK 465 LYS A 1068 REMARK 465 GLY A 1069 REMARK 465 LYS A 1070 REMARK 465 ARG A 1071 REMARK 465 THR A 1072 REMARK 465 LYS A 1073 REMARK 465 VAL A 1074 REMARK 465 ARG A 1075 REMARK 465 ILE A 1076 REMARK 465 MET A 1077 REMARK 465 GLY A 1078 REMARK 465 SER A 1079 REMARK 465 ASN A 1080 REMARK 465 PHE A 1081 REMARK 465 LEU A 1082 REMARK 465 ASP A 1083 REMARK 465 GLY A 1084 REMARK 465 THR A 1085 REMARK 465 LYS A 1086 REMARK 465 ASN A 1087 REMARK 465 ALA A 1088 REMARK 465 LYS A 1089 REMARK 465 ALA A 1090 REMARK 465 ASP A 1091 REMARK 465 GLN A 1092 REMARK 465 ARG A 1093 REMARK 465 ILE A 1094 REMARK 465 ARG A 1095 REMARK 465 LEU A 1096 REMARK 465 PRO A 1097 REMARK 465 VAL A 1098 REMARK 465 ASN A 1099 REMARK 465 MET A 1100 REMARK 465 PRO A 1101 REMARK 465 ASP A 1102 REMARK 465 TYR A 1103 REMARK 465 PRO A 1104 REMARK 465 THR A 1105 REMARK 465 LEU A 1106 REMARK 465 HIS A 1107 REMARK 465 LYS A 1108 REMARK 465 ILE A 1109 REMARK 465 ALA A 1110 REMARK 465 ASN A 1111 REMARK 465 ASP A 1112 REMARK 465 SER A 1113 REMARK 465 ALA A 1114 REMARK 465 ILE A 1115 REMARK 465 PRO A 1116 REMARK 465 GLU A 1117 REMARK 465 LYS A 1118 REMARK 465 GLN A 1119 REMARK 465 LEU A 1120 REMARK 465 LEU A 1121 REMARK 465 GLU A 1122 REMARK 465 ASN A 1123 REMARK 465 ARG A 1124 REMARK 465 ARG A 1125 REMARK 465 LYS A 1126 REMARK 465 LYS A 1127 REMARK 465 GLU A 1128 REMARK 465 ASN A 1129 REMARK 465 ARG A 1130 REMARK 465 ILE A 1131 REMARK 465 ASP A 1132 REMARK 465 ASP A 1133 REMARK 465 GLU A 1134 REMARK 465 ASN A 1135 REMARK 465 LYS A 1136 REMARK 465 LYS A 1137 REMARK 465 LYS A 1138 REMARK 465 LEU A 1139 REMARK 465 THR A 1140 REMARK 465 ARG A 1141 REMARK 465 LYS A 1142 REMARK 465 LYS A 1143 REMARK 465 ASN A 1144 REMARK 465 THR A 1145 REMARK 465 THR A 1146 REMARK 465 PRO A 1147 REMARK 465 MET A 1148 REMARK 465 GLU A 1149 REMARK 465 ARG A 1150 REMARK 465 LYS A 1151 REMARK 465 TYR A 1152 REMARK 465 LYS A 1153 REMARK 465 ARG A 1154 REMARK 465 VAL A 1155 REMARK 465 TYR A 1156 REMARK 465 GLY A 1157 REMARK 465 GLY A 1158 REMARK 465 ARG A 1159 REMARK 465 LYS A 1160 REMARK 465 ALA A 1161 REMARK 465 PHE A 1162 REMARK 465 GLU A 1163 REMARK 465 ALA A 1164 REMARK 465 PHE A 1165 REMARK 465 TYR A 1166 REMARK 465 GLU A 1167 REMARK 465 CYS A 1168 REMARK 465 ALA A 1169 REMARK 465 ASN A 1170 REMARK 465 LYS A 1171 REMARK 465 PRO A 1172 REMARK 465 LEU A 1173 REMARK 465 ASP A 1174 REMARK 465 TYR A 1175 REMARK 465 THR A 1176 REMARK 465 LEU A 1177 REMARK 465 GLU A 1178 REMARK 465 THR A 1179 REMARK 465 GLU A 1180 REMARK 465 LYS A 1181 REMARK 465 GLN A 1182 REMARK 465 PHE A 1183 REMARK 465 PHE A 1184 REMARK 465 ASN A 1185 REMARK 465 ILE A 1186 REMARK 465 PRO A 1187 REMARK 465 ILE A 1188 REMARK 465 ASP A 1189 REMARK 465 GLY A 1190 REMARK 465 VAL A 1191 REMARK 465 ILE A 1192 REMARK 465 ASP A 1193 REMARK 465 ASP A 1194 REMARK 465 VAL A 1195 REMARK 465 LEU A 1196 REMARK 465 ASN A 1197 REMARK 465 ASP A 1198 REMARK 465 LYS A 1199 REMARK 465 SER A 1200 REMARK 465 ASN A 1201 REMARK 465 TYR A 1202 REMARK 465 LYS A 1203 REMARK 465 LYS A 1204 REMARK 465 LYS A 1205 REMARK 465 PRO A 1206 REMARK 465 SER A 1207 REMARK 465 GLN A 1208 REMARK 465 ALA A 1209 REMARK 465 ARG A 1210 REMARK 465 THR A 1211 REMARK 465 ALA A 1212 REMARK 465 SER A 1213 REMARK 465 SER A 1214 REMARK 465 SER A 1215 REMARK 465 PRO A 1216 REMARK 465 ILE A 1217 REMARK 465 ARG A 1218 REMARK 465 LYS A 1219 REMARK 465 THR A 1220 REMARK 465 ALA A 1221 REMARK 465 LYS A 1222 REMARK 465 ALA A 1223 REMARK 465 VAL A 1224 REMARK 465 HIS A 1225 REMARK 465 SER A 1226 REMARK 465 LYS A 1227 REMARK 465 LYS A 1228 REMARK 465 LEU A 1229 REMARK 465 PRO A 1230 REMARK 465 ALA A 1231 REMARK 465 ARG A 1232 REMARK 465 LYS A 1233 REMARK 465 SER A 1234 REMARK 465 SER A 1235 REMARK 465 THR A 1236 REMARK 465 THR A 1237 REMARK 465 ASN A 1238 REMARK 465 ARG A 1239 REMARK 465 ASN A 1240 REMARK 465 LEU A 1241 REMARK 465 VAL A 1242 REMARK 465 GLU A 1243 REMARK 465 LEU A 1244 REMARK 465 GLU A 1245 REMARK 465 ARG A 1246 REMARK 465 ASP A 1247 REMARK 465 ILE A 1248 REMARK 465 THR A 1249 REMARK 465 ILE A 1250 REMARK 465 SER A 1251 REMARK 465 ARG A 1252 REMARK 465 GLU A 1253 REMARK 465 TYR A 1254 REMARK 465 LYS A 1255 REMARK 465 LEU A 1256 REMARK 465 ALA A 1257 REMARK 465 ALA A 1258 REMARK 465 ALA A 1259 REMARK 465 LEU A 1260 REMARK 465 GLU A 1261 REMARK 465 HIS A 1262 REMARK 465 HIS A 1263 REMARK 465 HIS A 1264 REMARK 465 HIS A 1265 REMARK 465 HIS A 1266 REMARK 465 HIS A 1267 REMARK 465 DT N 1 REMARK 465 DT N 2 REMARK 465 DT N 3 REMARK 465 DT N 4 REMARK 465 DG N 5 REMARK 465 DG N 6 REMARK 465 DT N 7 REMARK 465 DA N 8 REMARK 465 DG N 9 REMARK 465 DG N 14 REMARK 465 DA N 15 REMARK 465 DC N 16 REMARK 465 DT N 17 REMARK 465 DC N 18 REMARK 465 DG N 19 REMARK 465 DA N 20 REMARK 465 DC N 21 REMARK 465 DC N 22 REMARK 465 DG N 23 REMARK 465 DG P 1 REMARK 465 DA P 2 REMARK 465 DA P 3 REMARK 465 DG P 4 REMARK 465 DC T -1 REMARK 465 DG T 0 REMARK 465 DG T 1 REMARK 465 DT T 2 REMARK 465 DC T 3 REMARK 465 DG T 4 REMARK 465 DA T 5 REMARK 465 DG T 6 REMARK 465 DA T 7 REMARK 465 DG T 8 REMARK 465 DT T 9 REMARK 465 DC T 10 REMARK 465 DC T 37 REMARK 465 DT T 38 REMARK 465 DT T 39 REMARK 465 DC T 40 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 THR A 35 OG1 CG2 REMARK 470 LYS A 64 CG CD CE NZ REMARK 470 ASP A 65 CG OD1 OD2 REMARK 470 GLU A 66 CG CD OE1 OE2 REMARK 470 GLU A 68 CG CD OE1 OE2 REMARK 470 GLU A 276 CG CD OE1 OE2 REMARK 470 GLU A 278 CG CD OE1 OE2 REMARK 470 VAL A 279 CG1 CG2 REMARK 470 GLU A 280 CG CD OE1 OE2 REMARK 470 SER A 281 OG REMARK 470 GLU A 282 CG CD OE1 OE2 REMARK 470 VAL A 283 CG1 CG2 REMARK 470 HIS A 284 CG ND1 CD2 CE1 NE2 REMARK 470 GLU A 286 CG CD OE1 OE2 REMARK 470 ILE A 287 CG1 CG2 CD1 REMARK 470 SER A 288 OG REMARK 470 ILE A 289 CG1 CG2 CD1 REMARK 470 ARG A 322 CG CD NE CZ NH1 NH2 REMARK 470 LEU A 447 CG CD1 CD2 REMARK 470 THR A 448 OG1 CG2 REMARK 470 LYS A 450 CG CD CE NZ REMARK 470 VAL A 452 CG1 CG2 REMARK 470 LYS A 629 CG CD CE NZ REMARK 470 LEU A 632 CG CD1 CD2 REMARK 470 ASN A 633 CG OD1 ND2 REMARK 470 ASN A 634 CG OD1 ND2 REMARK 470 GLU A 635 CG CD OE1 OE2 REMARK 470 LYS A 636 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 CYS A 261 30.26 70.62 REMARK 500 ILE A 289 -55.18 -125.67 REMARK 500 LEU A 459 72.23 52.71 REMARK 500 GLN A 546 -133.03 59.71 REMARK 500 LEU A 632 -127.09 58.10 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 ARG A 263 0.28 SIDE CHAIN REMARK 500 ARG A 895 0.26 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 2DT P 101 REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A1302 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 693 OD1 REMARK 620 2 VAL A 694 O 85.6 REMARK 620 3 ASP A 892 OD2 78.7 96.4 REMARK 620 4 DTP A1301 O2G 92.0 85.0 170.5 REMARK 620 5 DTP A1301 O1B 157.9 109.0 114.7 73.5 REMARK 620 6 DTP A1301 O1A 87.7 157.0 103.8 73.2 72.3 REMARK 620 N 1 2 3 4 5 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EMD-45196 RELATED DB: EMDB REMARK 900 CRYO-EM STRUCTURE OF THE STRAND DISPLACEMENT COMPLEX (II) OF YEAST REMARK 900 MITOCHONDRIAL DNA POLYMERASE GAMMA (MIP1) WITH DOWNSTREAM DNA DBREF1 9C53 A 30 1254 UNP A0A8H4BW69_YEASX DBREF2 9C53 A A0A8H4BW69 30 1254 DBREF 9C53 N 1 23 PDB 9C53 9C53 1 23 DBREF 9C53 P 1 23 PDB 9C53 9C53 1 23 DBREF 9C53 T -1 40 PDB 9C53 9C53 -1 40 SEQADV 9C53 MET A 28 UNP A0A8H4BW6 EXPRESSION TAG SEQADV 9C53 ALA A 29 UNP A0A8H4BW6 EXPRESSION TAG SEQADV 9C53 VAL A 222 UNP A0A8H4BW6 ILE 222 CONFLICT SEQADV 9C53 LYS A 357 UNP A0A8H4BW6 GLU 357 CONFLICT SEQADV 9C53 ALA A 420 UNP A0A8H4BW6 VAL 420 CONFLICT SEQADV 9C53 MET A 540 UNP A0A8H4BW6 THR 540 CONFLICT SEQADV 9C53 ASN A 541 UNP A0A8H4BW6 HIS 541 CONFLICT SEQADV 9C53 ASN A 616 UNP A0A8H4BW6 SER 616 CONFLICT SEQADV 9C53 THR A 661 UNP A0A8H4BW6 ALA 661 CONFLICT SEQADV 9C53 PRO A 978 UNP A0A8H4BW6 SER 978 CONFLICT SEQADV 9C53 SER A 986 UNP A0A8H4BW6 ASN 986 CONFLICT SEQADV 9C53 LYS A 1255 UNP A0A8H4BW6 EXPRESSION TAG SEQADV 9C53 LEU A 1256 UNP A0A8H4BW6 EXPRESSION TAG SEQADV 9C53 ALA A 1257 UNP A0A8H4BW6 EXPRESSION TAG SEQADV 9C53 ALA A 1258 UNP A0A8H4BW6 EXPRESSION TAG SEQADV 9C53 ALA A 1259 UNP A0A8H4BW6 EXPRESSION TAG SEQADV 9C53 LEU A 1260 UNP A0A8H4BW6 EXPRESSION TAG SEQADV 9C53 GLU A 1261 UNP A0A8H4BW6 EXPRESSION TAG SEQADV 9C53 HIS A 1262 UNP A0A8H4BW6 EXPRESSION TAG SEQADV 9C53 HIS A 1263 UNP A0A8H4BW6 EXPRESSION TAG SEQADV 9C53 HIS A 1264 UNP A0A8H4BW6 EXPRESSION TAG SEQADV 9C53 HIS A 1265 UNP A0A8H4BW6 EXPRESSION TAG SEQADV 9C53 HIS A 1266 UNP A0A8H4BW6 EXPRESSION TAG SEQADV 9C53 HIS A 1267 UNP A0A8H4BW6 EXPRESSION TAG SEQRES 1 A 1240 MET ALA SER THR LYS LYS ASN THR ALA GLU ALA PRO ARG SEQRES 2 A 1240 ILE ASN PRO VAL GLY ILE GLN TYR LEU GLY GLU SER LEU SEQRES 3 A 1240 GLN ARG GLN VAL PHE GLY SER CYS GLY GLY LYS ASP GLU SEQRES 4 A 1240 VAL GLU GLN SER ASP LYS LEU MET GLU LEU SER LYS LYS SEQRES 5 A 1240 SER LEU LYS ASP HIS GLY LEU TRP GLY LYS LYS THR LEU SEQRES 6 A 1240 ILE THR ASP PRO ILE SER PHE PRO LEU PRO PRO LEU GLN SEQRES 7 A 1240 GLY ARG SER LEU ASP GLU HIS PHE GLN LYS ILE GLY ARG SEQRES 8 A 1240 PHE ASN SER GLU PRO TYR LYS SER PHE CYS GLU ASP LYS SEQRES 9 A 1240 PHE THR GLU MET VAL ALA ARG PRO ALA GLU TRP LEU ARG SEQRES 10 A 1240 LYS PRO GLY TRP VAL LYS TYR VAL PRO GLY MET ALA PRO SEQRES 11 A 1240 VAL GLU VAL ALA TYR PRO ASP GLU GLU LEU VAL VAL PHE SEQRES 12 A 1240 ASP VAL GLU THR LEU TYR ASN VAL SER ASP TYR PRO THR SEQRES 13 A 1240 LEU ALA THR ALA LEU SER SER THR ALA TRP TYR LEU TRP SEQRES 14 A 1240 CYS SER PRO PHE ILE CYS GLY GLY ASP ASP PRO ALA ALA SEQRES 15 A 1240 LEU ILE PRO LEU ASN THR LEU ASN LYS GLU GLN VAL VAL SEQRES 16 A 1240 ILE GLY HIS ASN VAL ALA TYR ASP ARG ALA ARG VAL LEU SEQRES 17 A 1240 GLU GLU TYR ASN PHE ARG ASP SER LYS ALA PHE PHE LEU SEQRES 18 A 1240 ASP THR GLN SER LEU HIS ILE ALA SER PHE GLY LEU CYS SEQRES 19 A 1240 SER ARG GLN ARG PRO MET PHE MET LYS ASN ASN LYS LYS SEQRES 20 A 1240 LYS GLU ALA GLU VAL GLU SER GLU VAL HIS PRO GLU ILE SEQRES 21 A 1240 SER ILE GLU ASP TYR ASP ASP PRO TRP LEU ASN VAL SER SEQRES 22 A 1240 ALA LEU ASN SER LEU LYS ASP VAL ALA LYS PHE HIS CYS SEQRES 23 A 1240 LYS ILE ASP LEU ASP LYS THR ASP ARG ASP PHE PHE ALA SEQRES 24 A 1240 SER THR ASP LYS SER THR ILE ILE GLU ASN PHE GLN LYS SEQRES 25 A 1240 LEU VAL ASN TYR CYS ALA THR ASP VAL THR ALA THR SER SEQRES 26 A 1240 GLN VAL PHE ASP LYS ILE PHE PRO VAL PHE LEU LYS LYS SEQRES 27 A 1240 CYS PRO HIS PRO VAL SER PHE ALA GLY LEU LYS SER LEU SEQRES 28 A 1240 SER LYS CYS ILE LEU PRO THR LYS LEU ASN ASP TRP ASN SEQRES 29 A 1240 ASP TYR LEU ASN SER SER GLU SER LEU TYR GLN GLN SER SEQRES 30 A 1240 LYS VAL GLN ILE GLU SER LYS ILE VAL GLN ILE ILE LYS SEQRES 31 A 1240 ASP ILE ALA LEU LEU LYS ASP LYS PRO ASP PHE TYR LEU SEQRES 32 A 1240 LYS ASP PRO TRP LEU SER GLN LEU ASP TRP THR THR LYS SEQRES 33 A 1240 PRO LEU ARG LEU THR LYS LYS GLY VAL PRO ALA LYS CYS SEQRES 34 A 1240 GLN LYS LEU PRO GLY PHE PRO GLU TRP TYR ARG GLN LEU SEQRES 35 A 1240 PHE PRO SER LYS ASP THR VAL GLU PRO LYS ILE THR ILE SEQRES 36 A 1240 LYS SER ARG ILE ILE PRO ILE LEU PHE LYS LEU SER TRP SEQRES 37 A 1240 GLU ASN SER PRO VAL ILE TRP SER LYS GLU SER GLY TRP SEQRES 38 A 1240 CYS PHE ASN VAL PRO HIS GLU GLN VAL GLU THR TYR LYS SEQRES 39 A 1240 ALA LYS ASN TYR VAL LEU ALA ASP SER VAL SER GLN GLU SEQRES 40 A 1240 GLU GLU GLU ILE ARG MET ASN ASN LEU GLY LEU GLN CYS SEQRES 41 A 1240 THR GLY VAL LEU PHE LYS VAL PRO HIS PRO ASN GLY PRO SEQRES 42 A 1240 THR PHE ASN CYS THR ASN LEU LEU THR LYS SER TYR ASN SEQRES 43 A 1240 HIS PHE PHE GLU LYS GLY VAL LEU LYS SER GLU SER GLU SEQRES 44 A 1240 LEU ALA HIS GLN ALA LEU GLN ILE ASN SER SER GLY SER SEQRES 45 A 1240 TYR TRP MET SER ALA ARG GLU ARG ILE GLN SER GLN PHE SEQRES 46 A 1240 VAL VAL PRO ASN CYS LYS PHE PRO ASN GLU PHE GLN SER SEQRES 47 A 1240 LEU SER ALA LYS SER SER LEU ASN ASN GLU LYS THR ASN SEQRES 48 A 1240 ASP LEU ALA ILE ILE ILE PRO LYS ILE VAL PRO MET GLY SEQRES 49 A 1240 THR ILE THR ARG ARG ALA VAL GLU ASN THR TRP LEU THR SEQRES 50 A 1240 ALA SER ASN ALA LYS ALA ASN ARG ILE GLY SER GLU LEU SEQRES 51 A 1240 LYS THR GLN VAL LYS ALA PRO PRO GLY TYR CYS PHE VAL SEQRES 52 A 1240 GLY ALA ASP VAL ASP SER GLU GLU LEU TRP ILE ALA SER SEQRES 53 A 1240 LEU VAL GLY ASP SER ILE PHE ASN VAL HIS GLY GLY THR SEQRES 54 A 1240 ALA ILE GLY TRP MET CYS LEU GLU GLY THR LYS ASN GLU SEQRES 55 A 1240 GLY THR ASP LEU HIS THR LYS THR ALA GLN ILE LEU GLY SEQRES 56 A 1240 CYS SER ARG ASN GLU ALA LYS ILE PHE ASN TYR GLY ARG SEQRES 57 A 1240 ILE TYR GLY ALA GLY ALA LYS PHE ALA SER GLN LEU LEU SEQRES 58 A 1240 LYS ARG PHE ASN PRO SER LEU THR ASP GLU GLU THR LYS SEQRES 59 A 1240 LYS ILE ALA ASN LYS LEU TYR GLU ASN THR LYS GLY LYS SEQRES 60 A 1240 THR LYS ARG SER LYS LEU PHE LYS LYS PHE TRP TYR GLY SEQRES 61 A 1240 GLY SER GLU SER ILE LEU PHE ASN LYS LEU GLU SER ILE SEQRES 62 A 1240 ALA GLU GLN GLU THR PRO LYS THR PRO VAL LEU GLY CYS SEQRES 63 A 1240 GLY ILE THR TYR SER LEU MET LYS LYS ASN LEU ARG ALA SEQRES 64 A 1240 ASN SER PHE LEU PRO SER ARG ILE ASN TRP ALA ILE GLN SEQRES 65 A 1240 SER SER GLY VAL ASP TYR LEU HIS LEU LEU CYS CYS SER SEQRES 66 A 1240 MET GLU TYR ILE ILE LYS LYS TYR ASN LEU GLU ALA ARG SEQRES 67 A 1240 LEU CYS ILE SER ILE HIS ASP GLU ILE ARG PHE LEU VAL SEQRES 68 A 1240 SER GLU LYS ASP LYS TYR ARG ALA ALA MET ALA LEU GLN SEQRES 69 A 1240 ILE SER ASN ILE TRP THR ARG ALA MET PHE CYS GLN GLN SEQRES 70 A 1240 MET GLY ILE ASN GLU LEU PRO GLN ASN CYS ALA PHE PHE SEQRES 71 A 1240 SER GLN VAL ASP ILE ASP SER VAL ILE ARG LYS GLU VAL SEQRES 72 A 1240 ASN MET ASP CYS ILE THR PRO SER ASN LYS THR ALA ILE SEQRES 73 A 1240 PRO HIS GLY GLU ALA LEU ASP ILE ASN GLN LEU LEU ASP SEQRES 74 A 1240 LYS PRO ASN SER LYS LEU GLY LYS PRO SER LEU ASP ILE SEQRES 75 A 1240 ASP SER LYS VAL SER GLN TYR ALA TYR ASN TYR ARG GLU SEQRES 76 A 1240 PRO VAL PHE GLU GLU TYR ASN LYS SER TYR THR PRO GLU SEQRES 77 A 1240 PHE LEU LYS TYR PHE LEU ALA MET GLN VAL GLN SER ASP SEQRES 78 A 1240 LYS ARG ASP VAL ASN ARG LEU GLU ASP GLU TYR LEU ARG SEQRES 79 A 1240 GLU CYS THR SER LYS GLU TYR ALA ARG ASP GLY ASN THR SEQRES 80 A 1240 ALA GLU TYR SER LEU LEU ASP TYR ILE LYS ASP VAL GLU SEQRES 81 A 1240 LYS GLY LYS ARG THR LYS VAL ARG ILE MET GLY SER ASN SEQRES 82 A 1240 PHE LEU ASP GLY THR LYS ASN ALA LYS ALA ASP GLN ARG SEQRES 83 A 1240 ILE ARG LEU PRO VAL ASN MET PRO ASP TYR PRO THR LEU SEQRES 84 A 1240 HIS LYS ILE ALA ASN ASP SER ALA ILE PRO GLU LYS GLN SEQRES 85 A 1240 LEU LEU GLU ASN ARG ARG LYS LYS GLU ASN ARG ILE ASP SEQRES 86 A 1240 ASP GLU ASN LYS LYS LYS LEU THR ARG LYS LYS ASN THR SEQRES 87 A 1240 THR PRO MET GLU ARG LYS TYR LYS ARG VAL TYR GLY GLY SEQRES 88 A 1240 ARG LYS ALA PHE GLU ALA PHE TYR GLU CYS ALA ASN LYS SEQRES 89 A 1240 PRO LEU ASP TYR THR LEU GLU THR GLU LYS GLN PHE PHE SEQRES 90 A 1240 ASN ILE PRO ILE ASP GLY VAL ILE ASP ASP VAL LEU ASN SEQRES 91 A 1240 ASP LYS SER ASN TYR LYS LYS LYS PRO SER GLN ALA ARG SEQRES 92 A 1240 THR ALA SER SER SER PRO ILE ARG LYS THR ALA LYS ALA SEQRES 93 A 1240 VAL HIS SER LYS LYS LEU PRO ALA ARG LYS SER SER THR SEQRES 94 A 1240 THR ASN ARG ASN LEU VAL GLU LEU GLU ARG ASP ILE THR SEQRES 95 A 1240 ILE SER ARG GLU TYR LYS LEU ALA ALA ALA LEU GLU HIS SEQRES 96 A 1240 HIS HIS HIS HIS HIS SEQRES 1 N 23 DT DT DT DT DG DG DT DA DG DT DC DG DT SEQRES 2 N 23 DG DA DC DT DC DG DA DC DC DG SEQRES 1 P 23 DG DA DA DG DA DC DA DG DT DC DT DG DC SEQRES 2 P 23 DG DG DC DG DC DG DC DG DG DG SEQRES 1 T 42 DC DG DG DT DC DG DA DG DA DG DT DC DA SEQRES 2 T 42 DC DG DA DC DT DA DC DC DC DG DC DG DC SEQRES 3 T 42 DG DC DC DG DC DA DG DA DC DT DG DT DC SEQRES 4 T 42 DT DT DC HET DTP A1301 30 HET MG A1302 1 HET 2DT P 101 19 HETNAM DTP 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE HETNAM MG MAGNESIUM ION HETNAM 2DT 3'-DEOXYTHYMIDINE-5'-MONOPHOSPHATE HETSYN 2DT 2',3'-DIDEOXYTHYMIDINE-5'-MONOPHOSPHATE FORMUL 5 DTP C10 H16 N5 O12 P3 FORMUL 6 MG MG 2+ FORMUL 7 2DT C10 H15 N2 O7 P HELIX 1 AA1 GLY A 50 GLY A 59 1 10 HELIX 2 AA2 GLU A 66 GLY A 85 1 20 HELIX 3 AA3 SER A 108 SER A 121 1 14 HELIX 4 AA4 GLU A 122 GLU A 129 1 8 HELIX 5 AA5 PRO A 199 GLY A 203 5 5 HELIX 6 AA6 VAL A 227 ALA A 232 1 6 HELIX 7 AA7 ARG A 233 TYR A 238 5 6 HELIX 8 AA8 THR A 250 SER A 257 1 8 HELIX 9 AA9 ARG A 265 SER A 281 1 17 HELIX 10 AB1 ILE A 289 ASP A 294 1 6 HELIX 11 AB2 PRO A 295 VAL A 299 5 5 HELIX 12 AB3 SER A 304 CYS A 313 1 10 HELIX 13 AB4 THR A 320 SER A 327 5 8 HELIX 14 AB5 LYS A 330 GLU A 335 1 6 HELIX 15 AB6 ASN A 336 CYS A 366 1 31 HELIX 16 AB7 HIS A 368 SER A 379 1 12 HELIX 17 AB8 LYS A 386 ALA A 420 1 35 HELIX 18 AB9 LYS A 425 ASP A 432 1 8 HELIX 19 AC1 PRO A 463 PHE A 470 1 8 HELIX 20 AC2 ILE A 486 PHE A 491 1 6 HELIX 21 AC3 GLN A 516 LYS A 523 1 8 HELIX 22 AC4 ASP A 529 GLY A 544 1 16 HELIX 23 AC5 THR A 569 SER A 571 5 3 HELIX 24 AC6 TYR A 572 GLU A 577 1 6 HELIX 25 AC7 GLU A 586 GLN A 609 1 24 HELIX 26 AC8 GLU A 676 VAL A 681 5 6 HELIX 27 AC9 SER A 696 SER A 708 1 13 HELIX 28 AD1 THR A 716 LEU A 723 1 8 HELIX 29 AD2 ASP A 732 GLY A 742 1 11 HELIX 30 AD3 SER A 744 TYR A 757 1 14 HELIX 31 AD4 GLY A 760 ASN A 772 1 13 HELIX 32 AD5 THR A 776 LYS A 792 1 17 HELIX 33 AD6 GLU A 810 GLU A 822 1 13 HELIX 34 AD7 THR A 836 LEU A 844 5 9 HELIX 35 AD8 PHE A 849 ASN A 881 1 33 HELIX 36 AD9 ASP A 902 MET A 925 1 24 HELIX 37 AE1 ASP A 970 LYS A 977 1 8 HELIX 38 AE2 SER A 986 SER A 994 1 9 HELIX 39 AE3 PRO A 1003 LYS A 1010 1 8 HELIX 40 AE4 THR A 1013 GLN A 1026 1 14 HELIX 41 AE5 ASP A 1028 SER A 1045 1 18 SHEET 1 AA1 7 VAL A 158 VAL A 160 0 SHEET 2 AA1 7 GLY A 147 TYR A 151 -1 N LYS A 150 O VAL A 158 SHEET 3 AA1 7 TRP A 193 CYS A 197 -1 O TRP A 193 N TYR A 151 SHEET 4 AA1 7 PRO A 182 LEU A 188 -1 N ALA A 185 O TRP A 196 SHEET 5 AA1 7 LEU A 167 THR A 174 -1 N GLU A 173 O LEU A 184 SHEET 6 AA1 7 GLN A 220 GLY A 224 1 O ILE A 223 N VAL A 168 SHEET 7 AA1 7 ALA A 245 ASP A 249 1 O PHE A 246 N VAL A 222 SHEET 1 AA2 3 LEU A 383 THR A 385 0 SHEET 2 AA2 3 ALA A 641 ILE A 643 -1 O ALA A 641 N THR A 385 SHEET 3 AA2 3 VAL A 614 PRO A 615 -1 N VAL A 614 O ILE A 642 SHEET 1 AA3 2 SER A 494 TRP A 495 0 SHEET 2 AA3 2 LEU A 581 LYS A 582 -1 O LYS A 582 N SER A 494 SHEET 1 AA4 3 VAL A 500 SER A 503 0 SHEET 2 AA4 3 GLY A 507 VAL A 512 -1 O GLY A 507 N SER A 503 SHEET 3 AA4 3 VAL A 550 LYS A 553 -1 O PHE A 552 N PHE A 510 SHEET 1 AA5 5 ALA A 884 ILE A 888 0 SHEET 2 AA5 5 GLU A 893 SER A 899 -1 O ARG A 895 N ILE A 888 SHEET 3 AA5 5 TYR A 687 ASP A 693 -1 N CYS A 688 O VAL A 898 SHEET 4 AA5 5 VAL A 940 ASP A 943 -1 O ASP A 943 N PHE A 689 SHEET 5 AA5 5 GLU A 967 LEU A 969 -1 O GLU A 967 N ILE A 942 SHEET 1 AA6 2 LYS A 794 ARG A 797 0 SHEET 2 AA6 2 LYS A 803 TYR A 806 -1 O TYR A 806 N LYS A 794 LINK OD1 ASP A 693 MG MG A1302 1555 1555 2.52 LINK O VAL A 694 MG MG A1302 1555 1555 2.04 LINK OD2 ASP A 892 MG MG A1302 1555 1555 2.14 LINK O2G DTP A1301 MG MG A1302 1555 1555 2.19 LINK O1B DTP A1301 MG MG A1302 1555 1555 2.53 LINK O1A DTP A1301 MG MG A1302 1555 1555 2.82 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 TER 8008 SER A1045 TER 8090 DT N 13 TER 8485 DG P 23 TER 9014 DT T 36 HETATM 9015 PG DTP A1301 123.203 115.477 117.630 1.00 20.00 P HETATM 9016 O1G DTP A1301 122.213 115.418 118.759 1.00 20.00 O HETATM 9017 O2G DTP A1301 123.264 116.838 116.990 1.00 20.00 O HETATM 9018 O3G DTP A1301 123.006 114.376 116.626 1.00 20.00 O HETATM 9019 PB DTP A1301 126.019 116.038 118.364 1.00 20.00 P HETATM 9020 O1B DTP A1301 126.082 116.999 117.226 1.00 20.00 O HETATM 9021 O2B DTP A1301 127.137 115.076 118.570 1.00 20.00 O HETATM 9022 O3B DTP A1301 124.653 115.208 118.282 1.00 20.00 O HETATM 9023 PA DTP A1301 125.330 118.349 120.065 1.00 20.00 P HETATM 9024 O1A DTP A1301 124.251 118.754 119.118 1.00 20.00 O HETATM 9025 O2A DTP A1301 125.051 118.445 121.525 1.00 20.00 O HETATM 9026 O3A DTP A1301 125.793 116.853 119.722 1.00 20.00 O HETATM 9027 O5' DTP A1301 126.664 119.165 119.723 1.00 20.00 O HETATM 9028 C5' DTP A1301 127.546 119.511 120.815 1.00 20.00 C HETATM 9029 C4' DTP A1301 128.968 119.547 120.315 1.00 20.00 C HETATM 9030 O4' DTP A1301 129.861 119.658 121.441 1.00 20.00 O HETATM 9031 C3' DTP A1301 129.414 118.305 119.554 1.00 20.00 C HETATM 9032 O3' DTP A1301 130.413 118.643 118.597 1.00 20.00 O HETATM 9033 C2' DTP A1301 129.974 117.413 120.657 1.00 20.00 C HETATM 9034 C1' DTP A1301 130.420 118.382 121.745 1.00 20.00 C HETATM 9035 N9 DTP A1301 129.968 117.993 123.077 1.00 20.00 N HETATM 9036 C8 DTP A1301 128.696 118.063 123.583 1.00 20.00 C HETATM 9037 N7 DTP A1301 128.617 117.626 124.818 1.00 20.00 N HETATM 9038 C5 DTP A1301 129.914 117.245 125.138 1.00 20.00 C HETATM 9039 C6 DTP A1301 130.485 116.701 126.302 1.00 20.00 C HETATM 9040 N6 DTP A1301 129.797 116.434 127.407 1.00 20.00 N HETATM 9041 N1 DTP A1301 131.814 116.441 126.280 1.00 20.00 N HETATM 9042 C2 DTP A1301 132.500 116.714 125.163 1.00 20.00 C HETATM 9043 N3 DTP A1301 132.070 117.221 124.012 1.00 20.00 N HETATM 9044 C4 DTP A1301 130.752 117.469 124.069 1.00 20.00 C HETATM 9045 MG MG A1302 124.358 118.602 116.304 1.00 30.00 MG HETATM 9046 P 2DT P 101 122.558 122.236 123.724 1.00 19.29 P HETATM 9047 OP1 2DT P 101 121.627 123.313 123.226 1.00 18.90 O HETATM 9048 OP2 2DT P 101 122.219 121.922 125.160 1.00 18.13 O HETATM 9049 O5' 2DT P 101 124.104 122.791 123.629 1.00 18.26 O HETATM 9050 N1 2DT P 101 127.814 122.584 124.626 1.00 15.75 N HETATM 9051 C6 2DT P 101 126.698 122.206 125.460 1.00 15.40 C HETATM 9052 C2 2DT P 101 129.141 121.943 124.821 1.00 15.71 C HETATM 9053 O2 2DT P 101 130.056 122.254 124.139 1.00 15.21 O HETATM 9054 N3 2DT P 101 129.317 120.908 125.880 1.00 16.25 N HETATM 9055 C4 2DT P 101 128.189 120.528 126.718 1.00 16.09 C HETATM 9056 O4 2DT P 101 128.327 119.707 127.558 1.00 16.91 O HETATM 9057 C5 2DT P 101 126.864 121.176 126.514 1.00 15.85 C HETATM 9058 C5M 2DT P 101 125.677 120.786 127.388 1.00 15.15 C HETATM 9059 C2' 2DT P 101 127.433 122.897 122.152 1.00 15.75 C HETATM 9060 C5' 2DT P 101 124.316 124.024 123.008 1.00 17.35 C HETATM 9061 C4' 2DT P 101 125.661 124.149 122.613 1.00 16.78 C HETATM 9062 O4' 2DT P 101 126.592 124.298 123.848 1.00 16.33 O HETATM 9063 C1' 2DT P 101 127.641 123.594 123.601 1.00 15.92 C HETATM 9064 C3' 2DT P 101 126.155 122.885 121.925 1.00 16.10 C CONECT 5184 9045 CONECT 5189 9045 CONECT 6757 9045 CONECT 9015 9016 9017 9018 9022 CONECT 9016 9015 CONECT 9017 9015 9045 CONECT 9018 9015 CONECT 9019 9020 9021 9022 9026 CONECT 9020 9019 9045 CONECT 9021 9019 CONECT 9022 9015 9019 CONECT 9023 9024 9025 9026 9027 CONECT 9024 9023 9045 CONECT 9025 9023 CONECT 9026 9019 9023 CONECT 9027 9023 9028 CONECT 9028 9027 9029 CONECT 9029 9028 9030 9031 CONECT 9030 9029 9034 CONECT 9031 9029 9032 9033 CONECT 9032 9031 CONECT 9033 9031 9034 CONECT 9034 9030 9033 9035 CONECT 9035 9034 9036 9044 CONECT 9036 9035 9037 CONECT 9037 9036 9038 CONECT 9038 9037 9039 9044 CONECT 9039 9038 9040 9041 CONECT 9040 9039 CONECT 9041 9039 9042 CONECT 9042 9041 9043 CONECT 9043 9042 9044 CONECT 9044 9035 9038 9043 CONECT 9045 5184 5189 6757 9017 CONECT 9045 9020 9024 CONECT 9046 9047 9048 9049 CONECT 9047 9046 CONECT 9048 9046 CONECT 9049 9046 9060 CONECT 9050 9051 9052 9063 CONECT 9051 9050 9057 CONECT 9052 9050 9053 9054 CONECT 9053 9052 CONECT 9054 9052 9055 CONECT 9055 9054 9056 9057 CONECT 9056 9055 CONECT 9057 9051 9055 9058 CONECT 9058 9057 CONECT 9059 9063 9064 CONECT 9060 9049 9061 CONECT 9061 9060 9062 9064 CONECT 9062 9061 9063 CONECT 9063 9050 9059 9062 CONECT 9064 9059 9061 MASTER 476 0 3 41 22 0 0 6 9060 4 54 104 END