data_9C73 # _entry.id 9C73 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.404 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 9C73 pdb_00009c73 10.2210/pdb9c73/pdb WWPDB D_1000284691 ? ? # _pdbx_audit_revision_history.ordinal 1 _pdbx_audit_revision_history.data_content_type 'Structure model' _pdbx_audit_revision_history.major_revision 1 _pdbx_audit_revision_history.minor_revision 0 _pdbx_audit_revision_history.revision_date 2025-08-27 _pdbx_audit_revision_history.part_number ? # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 9C73 _pdbx_database_status.recvd_initial_deposition_date 2024-06-10 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible N # _pdbx_contact_author.id 2 _pdbx_contact_author.email lyatsun1@swarthmore.edu _pdbx_contact_author.name_first Liliya _pdbx_contact_author.name_last Yatsunyk _pdbx_contact_author.name_mi ? _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0003-3946-0939 # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Ali, A.' 1 0000-0002-4999-6908 'Yatsunyk, L.A.' 2 0000-0003-3946-0939 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country ? _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'To Be Published' _citation.journal_id_ASTM ? _citation.journal_id_CSD 0353 _citation.journal_id_ISSN ? _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume ? _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title 'Hybrid G-quadruplex from Tetrahymena thermophila telomeric sequence in complex with triangular star shaped TrisQ ligand' _citation.year ? _citation.database_id_CSD ? _citation.pdbx_database_id_DOI ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Ali, A.' 1 0000-0002-4999-6908 primary 'Yatsunyk, L.A.' 2 0000-0003-3946-0939 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn 'G-quadruplex telomeric sequence' 7985.084 1 ? ? ? ? 2 non-polymer syn "(5S)-6-oxo-6H-dipyrido[1,2-b:1',2'-j]quinolizino[3,2-f][2,8]phenanthroline-12,19-diium" 399.443 1 ? ? ? ? 3 non-polymer syn 'POTASSIUM ION' 39.098 3 ? ? ? ? 4 non-polymer syn 'CALCIUM ION' 40.078 3 ? ? ? ? 5 non-polymer syn '4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID' 238.305 1 ? ? ? ? 6 non-polymer syn 'DI(HYDROXYETHYL)ETHER' 106.120 7 ? ? ? ? 7 non-polymer syn 'TETRAETHYLENE GLYCOL' 194.226 3 ? ? ? ? 8 water nat water 18.015 33 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type polydeoxyribonucleotide _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;(DG)(DT)(DT)(DG)(DG)(DG)(DG)(DT)(DT)(DG)(DG)(DG)(DG)(DT)(DT)(DG)(DG)(DG)(DG)(DT) (DT)(DG)(DG)(DG)(DG) ; _entity_poly.pdbx_seq_one_letter_code_can GTTGGGGTTGGGGTTGGGGTTGGGG _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 "(5S)-6-oxo-6H-dipyrido[1,2-b:1',2'-j]quinolizino[3,2-f][2,8]phenanthroline-12,19-diium" A1AVT 3 'POTASSIUM ION' K 4 'CALCIUM ION' CA 5 '4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID' EPE 6 'DI(HYDROXYETHYL)ETHER' PEG 7 'TETRAETHYLENE GLYCOL' PG4 8 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DG n 1 2 DT n 1 3 DT n 1 4 DG n 1 5 DG n 1 6 DG n 1 7 DG n 1 8 DT n 1 9 DT n 1 10 DG n 1 11 DG n 1 12 DG n 1 13 DG n 1 14 DT n 1 15 DT n 1 16 DG n 1 17 DG n 1 18 DG n 1 19 DG n 1 20 DT n 1 21 DT n 1 22 DG n 1 23 DG n 1 24 DG n 1 25 DG n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 25 _pdbx_entity_src_syn.organism_scientific 'Tetrahymena thermophila' _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 5911 _pdbx_entity_src_syn.details ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight A1AVT non-polymer . "(5S)-6-oxo-6H-dipyrido[1,2-b:1',2'-j]quinolizino[3,2-f][2,8]phenanthroline-12,19-diium" ? 'C27 H17 N3 O 2' 399.443 CA non-polymer . 'CALCIUM ION' ? 'Ca 2' 40.078 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 EPE non-polymer . '4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID' HEPES 'C8 H18 N2 O4 S' 238.305 HOH non-polymer . WATER ? 'H2 O' 18.015 K non-polymer . 'POTASSIUM ION' ? 'K 1' 39.098 PEG non-polymer . 'DI(HYDROXYETHYL)ETHER' ? 'C4 H10 O3' 106.120 PG4 non-polymer . 'TETRAETHYLENE GLYCOL' ? 'C8 H18 O5' 194.226 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DG 1 1 1 DG DG A . n A 1 2 DT 2 2 2 DT DT A . n A 1 3 DT 3 3 3 DT DT A . n A 1 4 DG 4 4 4 DG DG A . n A 1 5 DG 5 5 5 DG DG A . n A 1 6 DG 6 6 6 DG DG A . n A 1 7 DG 7 7 7 DG DG A . n A 1 8 DT 8 8 8 DT DT A . n A 1 9 DT 9 9 9 DT DT A . n A 1 10 DG 10 10 10 DG DG A . n A 1 11 DG 11 11 11 DG DG A . n A 1 12 DG 12 12 12 DG DG A . n A 1 13 DG 13 13 13 DG DG A . n A 1 14 DT 14 14 14 DT DT A . n A 1 15 DT 15 15 15 DT DT A . n A 1 16 DG 16 16 16 DG DG A . n A 1 17 DG 17 17 17 DG DG A . n A 1 18 DG 18 18 18 DG DG A . n A 1 19 DG 19 19 19 DG DG A . n A 1 20 DT 20 20 20 DT DT A . n A 1 21 DT 21 21 21 DT DT A . n A 1 22 DG 22 22 22 DG DG A . n A 1 23 DG 23 23 23 DG DG A . n A 1 24 DG 24 24 24 DG DG A . n A 1 25 DG 25 25 25 DG DG A . n # _pdbx_entity_instance_feature.ordinal 1 _pdbx_entity_instance_feature.comp_id A1AVT _pdbx_entity_instance_feature.asym_id ? _pdbx_entity_instance_feature.seq_num ? _pdbx_entity_instance_feature.auth_comp_id A1AVT _pdbx_entity_instance_feature.auth_asym_id ? _pdbx_entity_instance_feature.auth_seq_num ? _pdbx_entity_instance_feature.feature_type 'SUBJECT OF INVESTIGATION' _pdbx_entity_instance_feature.details ? # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 A1AVT 1 101 100 A1AVT LIG A . C 3 K 1 102 1 K K A . D 3 K 1 103 2 K K A . E 3 K 1 104 3 K K A . F 4 CA 1 105 1 CA CA A . G 4 CA 1 106 2 CA CA A . H 4 CA 1 107 3 CA CA A . I 5 EPE 1 108 110 EPE EPE A . J 6 PEG 1 109 111 PEG PEG A . K 6 PEG 1 110 112 PEG PEG A . L 6 PEG 1 111 113 PEG PEG A . M 6 PEG 1 112 114 PEG PEG A . N 6 PEG 1 113 115 PEG PEG A . O 7 PG4 1 114 116 PG4 PG4 A . P 7 PG4 1 115 117 PG4 PG4 A . Q 7 PG4 1 116 118 PG4 PG4 A . R 6 PEG 1 117 119 PEG PEG A . S 6 PEG 1 118 120 PEG PEG A . T 8 HOH 1 201 21 HOH HOH A . T 8 HOH 2 202 20 HOH HOH A . T 8 HOH 3 203 10 HOH HOH A . T 8 HOH 4 204 22 HOH HOH A . T 8 HOH 5 205 14 HOH HOH A . T 8 HOH 6 206 18 HOH HOH A . T 8 HOH 7 207 12 HOH HOH A . T 8 HOH 8 208 31 HOH HOH A . T 8 HOH 9 209 33 HOH HOH A . T 8 HOH 10 210 23 HOH HOH A . T 8 HOH 11 211 13 HOH HOH A . T 8 HOH 12 212 9 HOH HOH A . T 8 HOH 13 213 17 HOH HOH A . T 8 HOH 14 214 19 HOH HOH A . T 8 HOH 15 215 30 HOH HOH A . T 8 HOH 16 216 15 HOH HOH A . T 8 HOH 17 217 24 HOH HOH A . T 8 HOH 18 218 1 HOH HOH A . T 8 HOH 19 219 3 HOH HOH A . T 8 HOH 20 220 11 HOH HOH A . T 8 HOH 21 221 28 HOH HOH A . T 8 HOH 22 222 2 HOH HOH A . T 8 HOH 23 223 7 HOH HOH A . T 8 HOH 24 224 4 HOH HOH A . T 8 HOH 25 225 5 HOH HOH A . T 8 HOH 26 226 8 HOH HOH A . T 8 HOH 27 227 32 HOH HOH A . T 8 HOH 28 228 29 HOH HOH A . T 8 HOH 29 229 6 HOH HOH A . T 8 HOH 30 230 26 HOH HOH A . T 8 HOH 31 231 25 HOH HOH A . T 8 HOH 32 232 16 HOH HOH A . T 8 HOH 33 233 27 HOH HOH A . # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.21.1_5286 1 ? 'model building' ? ? ? ? ? ? ? ? ? ? ? Coot ? ? ? 0.8.9.2 2 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? autoPROC ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.19.2_4158 4 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? autoPROC ? ? ? . 5 # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 90.000 _cell.angle_beta_esd ? _cell.angle_gamma 120.000 _cell.angle_gamma_esd ? _cell.entry_id 9C73 _cell.details ? _cell.formula_units_Z ? _cell.length_a 54.913 _cell.length_a_esd ? _cell.length_b 54.913 _cell.length_b_esd ? _cell.length_c 98.701 _cell.length_c_esd ? _cell.volume 257752.286 _cell.volume_esd ? _cell.Z_PDB 12 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 9C73 _symmetry.cell_setting ? _symmetry.Int_Tables_number 178 _symmetry.space_group_name_Hall 'P 61 2 (x,y,z+5/12)' _symmetry.space_group_name_H-M 'P 61 2 2' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 9C73 _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.69 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 54.27 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? _exptl_crystal.pdbx_mosaic_method ? _exptl_crystal.pdbx_mosaic_block_size ? _exptl_crystal.pdbx_mosaic_block_size_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details ;0.1 M potassium chloride, 0.01 calcium chloride dihydrate, 0.05 M HEPES sodium pH 7.0, 10% v/v PEG 400 ; _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.temp 293.15 # _diffrn.ambient_environment ? _diffrn.ambient_temp 196 _diffrn.ambient_temp_details 'LIQUID NITROGEN' _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS PILATUS 6M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2023-07-09 _diffrn_detector.pdbx_frequency ? _diffrn_detector.id ? _diffrn_detector.number_of_axes ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.920105 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'NSLS-II BEAMLINE 17-ID-1' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.920105 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline 17-ID-1 _diffrn_source.pdbx_synchrotron_site NSLS-II # _reflns.B_iso_Wilson_estimate 32.27 _reflns.entry_id 9C73 _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.656 _reflns.d_resolution_low 47.556 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 11080 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 100 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 18.6 _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 11.3 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.999 _reflns.pdbx_CC_star ? _reflns.pdbx_R_split ? _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_CC_split_method ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_1 ? _reflns.pdbx_aniso_diffraction_limit_2 ? _reflns.pdbx_aniso_diffraction_limit_3 ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvalue_1 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_2 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_3 ? _reflns.pdbx_orthogonalization_convention ? _reflns.pdbx_percent_possible_ellipsoidal ? _reflns.pdbx_percent_possible_spherical ? _reflns.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns.pdbx_percent_possible_spherical_anomalous ? _reflns.pdbx_redundancy_anomalous ? _reflns.pdbx_CC_half_anomalous ? _reflns.pdbx_absDiff_over_sigma_anomalous ? _reflns.pdbx_percent_possible_anomalous ? _reflns.pdbx_observed_signal_threshold ? _reflns.pdbx_signal_type ? _reflns.pdbx_signal_details ? _reflns.pdbx_signal_software_id ? # _reflns_shell.d_res_high 1.656 _reflns_shell.d_res_low 1.684 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 528 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy 15.2 _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half 0.572 _reflns_shell.pdbx_CC_star ? _reflns_shell.pdbx_R_split ? _reflns_shell.percent_possible_all 100 _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs 4.554 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_percent_possible_ellipsoidal ? _reflns_shell.pdbx_percent_possible_spherical ? _reflns_shell.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns_shell.pdbx_percent_possible_spherical_anomalous ? _reflns_shell.pdbx_redundancy_anomalous ? _reflns_shell.pdbx_CC_half_anomalous ? _reflns_shell.pdbx_absDiff_over_sigma_anomalous ? _reflns_shell.pdbx_percent_possible_anomalous ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean 49.20 _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 9C73 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 1.66 _refine.ls_d_res_low 27.46 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 11040 _refine.ls_number_reflns_R_free 578 _refine.ls_number_reflns_R_work 10462 _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.62 _refine.ls_percent_reflns_R_free 5.24 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2149 _refine.ls_R_factor_R_free 0.2358 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.2136 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.34 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values 'GeoStd + Monomer Library + CDL v1.2' _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.1000 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.9000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 36.4149 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.2116 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.details ? _refine_hist.d_res_high 1.66 _refine_hist.d_res_low 27.46 _refine_hist.number_atoms_solvent 33 _refine_hist.number_atoms_total 704 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total ? _refine_hist.pdbx_B_iso_mean_ligand ? _refine_hist.pdbx_B_iso_mean_solvent ? _refine_hist.pdbx_number_atoms_protein 0 _refine_hist.pdbx_number_atoms_nucleic_acid 531 _refine_hist.pdbx_number_atoms_ligand 140 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.0088 ? 742 ? f_bond_d ? ? 'X-RAY DIFFRACTION' ? 1.0975 ? 1091 ? f_angle_d ? ? 'X-RAY DIFFRACTION' ? 0.0569 ? 99 ? f_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.0082 ? 26 ? f_plane_restr ? ? 'X-RAY DIFFRACTION' ? 31.9750 ? 328 ? f_dihedral_angle_d ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_R_complete _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free _refine_ls_shell.R_factor_R_free 'X-RAY DIFFRACTION' 1.66 1.82 . . 152 2502 98.88 . . . . 0.3395 . . . . . . . . . . . 0.3685 'X-RAY DIFFRACTION' 1.82 2.09 . . 137 2572 100.00 . . . . 0.2530 . . . . . . . . . . . 0.2854 'X-RAY DIFFRACTION' 2.09 2.63 . . 118 2636 100.00 . . . . 0.2584 . . . . . . . . . . . 0.2616 'X-RAY DIFFRACTION' 2.63 27.46 . . 171 2752 99.63 . . . . 0.1892 . . . . . . . . . . . 0.2187 # _struct.entry_id 9C73 _struct.title 'Hybrid G-quadruplex from Tetrahymena thermophila telomeric sequence in complex with TrisQO' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 9C73 _struct_keywords.text 'G-quadruplex, TrisQO, DNA, hybrid' _struct_keywords.pdbx_keywords DNA # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? E N N 3 ? F N N 4 ? G N N 4 ? H N N 4 ? I N N 5 ? J N N 6 ? K N N 6 ? L N N 6 ? M N N 6 ? N N N 6 ? O N N 7 ? P N N 7 ? Q N N 7 ? R N N 6 ? S N N 6 ? T N N 8 ? # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 9C73 _struct_ref.pdbx_db_accession 9C73 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin 1 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 9C73 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 25 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession 9C73 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 25 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 25 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A DG 1 O6 ? ? ? 1_555 C K . K ? ? A DG 1 A K 102 10_444 ? ? ? ? ? ? ? 2.606 ? ? metalc2 metalc ? ? A DT 2 OP2 ? ? ? 1_555 F CA . CA ? ? A DT 2 A CA 105 10_444 ? ? ? ? ? ? ? 2.226 ? ? metalc3 metalc ? ? A DT 3 OP2 ? ? ? 1_555 H CA . CA ? ? A DT 3 A CA 107 1_555 ? ? ? ? ? ? ? 2.028 ? ? metalc4 metalc ? ? A DG 4 O6 ? ? ? 1_555 C K . K ? ? A DG 4 A K 102 1_555 ? ? ? ? ? ? ? 2.804 ? ? metalc5 metalc ? ? A DG 5 O6 ? ? ? 1_555 C K . K ? ? A DG 5 A K 102 1_555 ? ? ? ? ? ? ? 2.863 ? ? metalc6 metalc ? ? A DG 5 O6 ? ? ? 1_555 D K . K ? ? A DG 5 A K 103 1_555 ? ? ? ? ? ? ? 2.842 ? ? metalc7 metalc ? ? A DG 5 OP1 ? ? ? 1_555 H CA . CA ? ? A DG 5 A CA 107 1_555 ? ? ? ? ? ? ? 2.380 ? ? metalc8 metalc ? ? A DG 6 O6 ? ? ? 1_555 D K . K ? ? A DG 6 A K 103 1_555 ? ? ? ? ? ? ? 2.809 ? ? metalc9 metalc ? ? A DG 6 O6 ? ? ? 1_555 E K . K ? ? A DG 6 A K 104 1_555 ? ? ? ? ? ? ? 2.916 ? ? metalc10 metalc ? ? A DG 7 O6 ? ? ? 1_555 E K . K ? ? A DG 7 A K 104 1_555 ? ? ? ? ? ? ? 2.804 ? ? metalc11 metalc ? ? A DG 10 O6 ? ? ? 1_555 C K . K ? ? A DG 10 A K 102 1_555 ? ? ? ? ? ? ? 2.967 ? ? metalc12 metalc ? ? A DG 10 O6 ? ? ? 1_555 D K . K ? ? A DG 10 A K 103 1_555 ? ? ? ? ? ? ? 2.779 ? ? metalc13 metalc ? ? A DG 10 OP2 ? ? ? 1_555 F CA . CA ? ? A DG 10 A CA 105 1_555 ? ? ? ? ? ? ? 2.179 ? ? metalc14 metalc ? ? A DG 11 O6 ? ? ? 1_555 D K . K ? ? A DG 11 A K 103 1_555 ? ? ? ? ? ? ? 2.828 ? ? metalc15 metalc ? ? A DG 11 O6 ? ? ? 1_555 E K . K ? ? A DG 11 A K 104 1_555 ? ? ? ? ? ? ? 2.796 ? ? metalc16 metalc ? ? A DG 12 O6 ? ? ? 1_555 E K . K ? ? A DG 12 A K 104 1_555 ? ? ? ? ? ? ? 2.940 ? ? metalc17 metalc ? ? A DG 12 OP2 ? ? ? 1_555 G CA . CA ? ? A DG 12 A CA 106 12_545 ? ? ? ? ? ? ? 2.659 ? ? metalc18 metalc ? ? A DG 13 O6 ? ? ? 1_555 G CA . CA ? ? A DG 13 A CA 106 12_545 ? ? ? ? ? ? ? 2.462 ? ? metalc19 metalc ? ? A DT 15 OP1 ? ? ? 1_555 H CA . CA ? ? A DT 15 A CA 107 6_555 ? ? ? ? ? ? ? 2.139 ? ? metalc20 metalc ? ? A DG 16 O6 ? ? ? 1_555 E K . K ? ? A DG 16 A K 104 1_555 ? ? ? ? ? ? ? 2.584 ? ? metalc21 metalc ? ? A DG 17 O6 ? ? ? 1_555 D K . K ? ? A DG 17 A K 103 1_555 ? ? ? ? ? ? ? 2.805 ? ? metalc22 metalc ? ? A DG 17 O6 ? ? ? 1_555 E K . K ? ? A DG 17 A K 104 1_555 ? ? ? ? ? ? ? 2.822 ? ? metalc23 metalc ? ? A DG 17 OP1 ? ? ? 1_555 F CA . CA ? ? A DG 17 A CA 105 8_545 ? ? ? ? ? ? ? 2.298 ? ? metalc24 metalc ? ? A DG 18 O6 ? ? ? 1_555 C K . K ? ? A DG 18 A K 102 1_555 ? ? ? ? ? ? ? 2.998 ? ? metalc25 metalc ? ? A DG 18 O6 ? ? ? 1_555 D K . K ? ? A DG 18 A K 103 1_555 ? ? ? ? ? ? ? 2.808 ? ? metalc26 metalc ? ? A DG 19 O6 ? ? ? 1_555 C K . K ? ? A DG 19 A K 102 1_555 ? ? ? ? ? ? ? 2.770 ? ? metalc27 metalc ? ? A DT 20 OP2 ? ? ? 1_555 G CA . CA ? ? A DT 20 A CA 106 1_555 ? ? ? ? ? ? ? 2.467 ? ? metalc28 metalc ? ? A DG 22 O6 ? ? ? 1_555 C K . K ? ? A DG 22 A K 102 1_555 ? ? ? ? ? ? ? 2.785 ? ? metalc29 metalc ? ? A DG 23 O6 ? ? ? 1_555 C K . K ? ? A DG 23 A K 102 1_555 ? ? ? ? ? ? ? 2.856 ? ? metalc30 metalc ? ? A DG 23 O6 ? ? ? 1_555 D K . K ? ? A DG 23 A K 103 1_555 ? ? ? ? ? ? ? 2.865 ? ? metalc31 metalc ? ? A DG 24 O6 ? ? ? 1_555 D K . K ? ? A DG 24 A K 103 1_555 ? ? ? ? ? ? ? 2.691 ? ? metalc32 metalc ? ? A DG 24 O6 ? ? ? 1_555 E K . K ? ? A DG 24 A K 104 1_555 ? ? ? ? ? ? ? 2.968 ? ? metalc33 metalc ? ? A DG 25 O6 ? ? ? 1_555 E K . K ? ? A DG 25 A K 104 1_555 ? ? ? ? ? ? ? 2.613 ? ? metalc34 metalc ? ? F CA . CA ? ? ? 1_555 T HOH . O ? ? A CA 105 A HOH 220 1_555 ? ? ? ? ? ? ? 2.128 ? ? metalc35 metalc ? ? F CA . CA ? ? ? 1_555 T HOH . O ? ? A CA 105 A HOH 223 1_555 ? ? ? ? ? ? ? 2.322 ? ? metalc36 metalc ? ? F CA . CA ? ? ? 1_555 T HOH . O ? ? A CA 105 A HOH 229 1_555 ? ? ? ? ? ? ? 2.244 ? ? metalc37 metalc ? ? G CA . CA ? ? ? 1_555 T HOH . O ? ? A CA 106 A HOH 224 1_555 ? ? ? ? ? ? ? 2.553 ? ? metalc38 metalc ? ? G CA . CA ? ? ? 1_555 T HOH . O ? ? A CA 106 A HOH 225 1_555 ? ? ? ? ? ? ? 2.501 ? ? metalc39 metalc ? ? H CA . CA ? ? ? 1_555 J PEG . O1 ? ? A CA 107 A PEG 109 1_555 ? ? ? ? ? ? ? 2.303 ? ? metalc40 metalc ? ? H CA . CA ? ? ? 1_555 J PEG . O2 ? ? A CA 107 A PEG 109 1_555 ? ? ? ? ? ? ? 2.496 ? ? metalc41 metalc ? ? H CA . CA ? ? ? 1_555 J PEG . O4 ? ? A CA 107 A PEG 109 1_555 ? ? ? ? ? ? ? 2.220 ? ? metalc42 metalc ? ? H CA . CA ? ? ? 1_555 T HOH . O ? ? A CA 107 A HOH 201 1_555 ? ? ? ? ? ? ? 2.739 ? ? hydrog1 hydrog ? ? A DG 4 N1 ? ? ? 1_555 A DG 22 O6 ? ? A DG 4 A DG 22 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog2 hydrog ? ? A DG 4 N2 ? ? ? 1_555 A DG 22 N7 ? ? A DG 4 A DG 22 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog3 hydrog ? ? A DG 5 N1 ? ? ? 1_555 A DG 10 O6 ? ? A DG 5 A DG 10 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog4 hydrog ? ? A DG 5 N2 ? ? ? 1_555 A DG 10 N7 ? ? A DG 5 A DG 10 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog5 hydrog ? ? A DG 5 N7 ? ? ? 1_555 A DG 23 N2 ? ? A DG 5 A DG 23 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog6 hydrog ? ? A DG 5 O6 ? ? ? 1_555 A DG 23 N1 ? ? A DG 5 A DG 23 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog7 hydrog ? ? A DG 6 N1 ? ? ? 1_555 A DG 11 O6 ? ? A DG 6 A DG 11 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog8 hydrog ? ? A DG 6 N2 ? ? ? 1_555 A DG 11 N7 ? ? A DG 6 A DG 11 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog9 hydrog ? ? A DG 6 N7 ? ? ? 1_555 A DG 24 N2 ? ? A DG 6 A DG 24 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog10 hydrog ? ? A DG 6 O6 ? ? ? 1_555 A DG 24 N1 ? ? A DG 6 A DG 24 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog11 hydrog ? ? A DG 7 N1 ? ? ? 1_555 A DG 12 O6 ? ? A DG 7 A DG 12 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog12 hydrog ? ? A DG 7 N2 ? ? ? 1_555 A DG 12 N7 ? ? A DG 7 A DG 12 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog13 hydrog ? ? A DG 7 N2 ? ? ? 1_555 A DG 13 N3 ? ? A DG 7 A DG 13 1_555 ? ? ? ? ? ? 'DG-DG MISPAIR' ? ? ? hydrog14 hydrog ? ? A DG 7 N7 ? ? ? 1_555 A DG 25 N2 ? ? A DG 7 A DG 25 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog15 hydrog ? ? A DG 7 O6 ? ? ? 1_555 A DG 25 N1 ? ? A DG 7 A DG 25 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog16 hydrog ? ? A DG 10 N1 ? ? ? 1_555 A DG 18 O6 ? ? A DG 10 A DG 18 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog17 hydrog ? ? A DG 10 N2 ? ? ? 1_555 A DG 18 N7 ? ? A DG 10 A DG 18 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog18 hydrog ? ? A DG 11 N1 ? ? ? 1_555 A DG 17 O6 ? ? A DG 11 A DG 17 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog19 hydrog ? ? A DG 11 N2 ? ? ? 1_555 A DG 17 N7 ? ? A DG 11 A DG 17 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog20 hydrog ? ? A DG 12 N1 ? ? ? 1_555 A DG 16 O6 ? ? A DG 12 A DG 16 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog21 hydrog ? ? A DG 12 N2 ? ? ? 1_555 A DG 16 N7 ? ? A DG 12 A DG 16 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog22 hydrog ? ? A DG 16 N1 ? ? ? 1_555 A DG 25 O6 ? ? A DG 16 A DG 25 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog23 hydrog ? ? A DG 16 N2 ? ? ? 1_555 A DG 25 N7 ? ? A DG 16 A DG 25 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog24 hydrog ? ? A DG 17 N1 ? ? ? 1_555 A DG 24 O6 ? ? A DG 17 A DG 24 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog25 hydrog ? ? A DG 17 N2 ? ? ? 1_555 A DG 24 N7 ? ? A DG 17 A DG 24 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog26 hydrog ? ? A DG 18 N1 ? ? ? 1_555 A DG 23 O6 ? ? A DG 18 A DG 23 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog27 hydrog ? ? A DG 18 N2 ? ? ? 1_555 A DG 23 N7 ? ? A DG 18 A DG 23 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog28 hydrog ? ? A DG 19 N7 ? ? ? 1_555 A DG 22 N2 ? ? A DG 19 A DG 22 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog29 hydrog ? ? A DG 19 O6 ? ? ? 1_555 A DG 22 N1 ? ? A DG 19 A DG 22 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference metalc ? ? hydrog ? ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 O6 ? A DG 1 ? A DG 1 ? 1_555 K ? C K . ? A K 102 ? 10_444 O6 ? A DG 4 ? A DG 4 ? 1_555 69.3 ? 2 O6 ? A DG 1 ? A DG 1 ? 1_555 K ? C K . ? A K 102 ? 10_444 O6 ? A DG 5 ? A DG 5 ? 1_555 67.1 ? 3 O6 ? A DG 4 ? A DG 4 ? 1_555 K ? C K . ? A K 102 ? 10_444 O6 ? A DG 5 ? A DG 5 ? 1_555 4.7 ? 4 O6 ? A DG 1 ? A DG 1 ? 1_555 K ? C K . ? A K 102 ? 10_444 O6 ? A DG 10 ? A DG 10 ? 1_555 77.7 ? 5 O6 ? A DG 4 ? A DG 4 ? 1_555 K ? C K . ? A K 102 ? 10_444 O6 ? A DG 10 ? A DG 10 ? 1_555 8.4 ? 6 O6 ? A DG 5 ? A DG 5 ? 1_555 K ? C K . ? A K 102 ? 10_444 O6 ? A DG 10 ? A DG 10 ? 1_555 11.2 ? 7 O6 ? A DG 1 ? A DG 1 ? 1_555 K ? C K . ? A K 102 ? 10_444 O6 ? A DG 18 ? A DG 18 ? 1_555 81.8 ? 8 O6 ? A DG 4 ? A DG 4 ? 1_555 K ? C K . ? A K 102 ? 10_444 O6 ? A DG 18 ? A DG 18 ? 1_555 16.9 ? 9 O6 ? A DG 5 ? A DG 5 ? 1_555 K ? C K . ? A K 102 ? 10_444 O6 ? A DG 18 ? A DG 18 ? 1_555 16.3 ? 10 O6 ? A DG 10 ? A DG 10 ? 1_555 K ? C K . ? A K 102 ? 10_444 O6 ? A DG 18 ? A DG 18 ? 1_555 11.6 ? 11 O6 ? A DG 1 ? A DG 1 ? 1_555 K ? C K . ? A K 102 ? 10_444 O6 ? A DG 19 ? A DG 19 ? 1_555 86.7 ? 12 O6 ? A DG 4 ? A DG 4 ? 1_555 K ? C K . ? A K 102 ? 10_444 O6 ? A DG 19 ? A DG 19 ? 1_555 21.9 ? 13 O6 ? A DG 5 ? A DG 5 ? 1_555 K ? C K . ? A K 102 ? 10_444 O6 ? A DG 19 ? A DG 19 ? 1_555 21.6 ? 14 O6 ? A DG 10 ? A DG 10 ? 1_555 K ? C K . ? A K 102 ? 10_444 O6 ? A DG 19 ? A DG 19 ? 1_555 15.7 ? 15 O6 ? A DG 18 ? A DG 18 ? 1_555 K ? C K . ? A K 102 ? 10_444 O6 ? A DG 19 ? A DG 19 ? 1_555 5.2 ? 16 O6 ? A DG 1 ? A DG 1 ? 1_555 K ? C K . ? A K 102 ? 10_444 O6 ? A DG 22 ? A DG 22 ? 1_555 71.7 ? 17 O6 ? A DG 4 ? A DG 4 ? 1_555 K ? C K . ? A K 102 ? 10_444 O6 ? A DG 22 ? A DG 22 ? 1_555 15.6 ? 18 O6 ? A DG 5 ? A DG 5 ? 1_555 K ? C K . ? A K 102 ? 10_444 O6 ? A DG 22 ? A DG 22 ? 1_555 12.1 ? 19 O6 ? A DG 10 ? A DG 10 ? 1_555 K ? C K . ? A K 102 ? 10_444 O6 ? A DG 22 ? A DG 22 ? 1_555 16.2 ? 20 O6 ? A DG 18 ? A DG 18 ? 1_555 K ? C K . ? A K 102 ? 10_444 O6 ? A DG 22 ? A DG 22 ? 1_555 11.1 ? 21 O6 ? A DG 19 ? A DG 19 ? 1_555 K ? C K . ? A K 102 ? 10_444 O6 ? A DG 22 ? A DG 22 ? 1_555 15.2 ? 22 O6 ? A DG 1 ? A DG 1 ? 1_555 K ? C K . ? A K 102 ? 10_444 O6 ? A DG 23 ? A DG 23 ? 1_555 71.6 ? 23 O6 ? A DG 4 ? A DG 4 ? 1_555 K ? C K . ? A K 102 ? 10_444 O6 ? A DG 23 ? A DG 23 ? 1_555 15.7 ? 24 O6 ? A DG 5 ? A DG 5 ? 1_555 K ? C K . ? A K 102 ? 10_444 O6 ? A DG 23 ? A DG 23 ? 1_555 12.2 ? 25 O6 ? A DG 10 ? A DG 10 ? 1_555 K ? C K . ? A K 102 ? 10_444 O6 ? A DG 23 ? A DG 23 ? 1_555 16.5 ? 26 O6 ? A DG 18 ? A DG 18 ? 1_555 K ? C K . ? A K 102 ? 10_444 O6 ? A DG 23 ? A DG 23 ? 1_555 11.3 ? 27 O6 ? A DG 19 ? A DG 19 ? 1_555 K ? C K . ? A K 102 ? 10_444 O6 ? A DG 23 ? A DG 23 ? 1_555 15.4 ? 28 O6 ? A DG 22 ? A DG 22 ? 1_555 K ? C K . ? A K 102 ? 10_444 O6 ? A DG 23 ? A DG 23 ? 1_555 0.3 ? 29 OP2 ? A DT 2 ? A DT 2 ? 1_555 CA ? F CA . ? A CA 105 ? 10_444 OP2 ? A DG 10 ? A DG 10 ? 1_555 17.9 ? 30 OP2 ? A DT 2 ? A DT 2 ? 1_555 CA ? F CA . ? A CA 105 ? 10_444 OP1 ? A DG 17 ? A DG 17 ? 1_555 36.3 ? 31 OP2 ? A DG 10 ? A DG 10 ? 1_555 CA ? F CA . ? A CA 105 ? 10_444 OP1 ? A DG 17 ? A DG 17 ? 1_555 52.9 ? 32 OP2 ? A DT 2 ? A DT 2 ? 1_555 CA ? F CA . ? A CA 105 ? 10_444 O ? T HOH . ? A HOH 220 ? 1_555 22.2 ? 33 OP2 ? A DG 10 ? A DG 10 ? 1_555 CA ? F CA . ? A CA 105 ? 10_444 O ? T HOH . ? A HOH 220 ? 1_555 4.4 ? 34 OP1 ? A DG 17 ? A DG 17 ? 1_555 CA ? F CA . ? A CA 105 ? 10_444 O ? T HOH . ? A HOH 220 ? 1_555 57.2 ? 35 OP2 ? A DT 2 ? A DT 2 ? 1_555 CA ? F CA . ? A CA 105 ? 10_444 O ? T HOH . ? A HOH 223 ? 1_555 21.9 ? 36 OP2 ? A DG 10 ? A DG 10 ? 1_555 CA ? F CA . ? A CA 105 ? 10_444 O ? T HOH . ? A HOH 223 ? 1_555 6.2 ? 37 OP1 ? A DG 17 ? A DG 17 ? 1_555 CA ? F CA . ? A CA 105 ? 10_444 O ? T HOH . ? A HOH 223 ? 1_555 54.8 ? 38 O ? T HOH . ? A HOH 220 ? 1_555 CA ? F CA . ? A CA 105 ? 10_444 O ? T HOH . ? A HOH 223 ? 1_555 5.9 ? 39 OP2 ? A DT 2 ? A DT 2 ? 1_555 CA ? F CA . ? A CA 105 ? 10_444 O ? T HOH . ? A HOH 229 ? 1_555 23.8 ? 40 OP2 ? A DG 10 ? A DG 10 ? 1_555 CA ? F CA . ? A CA 105 ? 10_444 O ? T HOH . ? A HOH 229 ? 1_555 6.7 ? 41 OP1 ? A DG 17 ? A DG 17 ? 1_555 CA ? F CA . ? A CA 105 ? 10_444 O ? T HOH . ? A HOH 229 ? 1_555 59.4 ? 42 O ? T HOH . ? A HOH 220 ? 1_555 CA ? F CA . ? A CA 105 ? 10_444 O ? T HOH . ? A HOH 229 ? 1_555 3.2 ? 43 O ? T HOH . ? A HOH 223 ? 1_555 CA ? F CA . ? A CA 105 ? 10_444 O ? T HOH . ? A HOH 229 ? 1_555 9.1 ? 44 OP2 ? A DT 3 ? A DT 3 ? 1_555 CA ? H CA . ? A CA 107 ? 1_555 OP1 ? A DG 5 ? A DG 5 ? 1_555 100.8 ? 45 OP2 ? A DT 3 ? A DT 3 ? 1_555 CA ? H CA . ? A CA 107 ? 1_555 OP1 ? A DT 15 ? A DT 15 ? 1_555 103.1 ? 46 OP1 ? A DG 5 ? A DG 5 ? 1_555 CA ? H CA . ? A CA 107 ? 1_555 OP1 ? A DT 15 ? A DT 15 ? 1_555 11.6 ? 47 OP2 ? A DT 3 ? A DT 3 ? 1_555 CA ? H CA . ? A CA 107 ? 1_555 O1 ? J PEG . ? A PEG 109 ? 1_555 78.6 ? 48 OP1 ? A DG 5 ? A DG 5 ? 1_555 CA ? H CA . ? A CA 107 ? 1_555 O1 ? J PEG . ? A PEG 109 ? 1_555 154.6 ? 49 OP1 ? A DT 15 ? A DT 15 ? 1_555 CA ? H CA . ? A CA 107 ? 1_555 O1 ? J PEG . ? A PEG 109 ? 1_555 143.4 ? 50 OP2 ? A DT 3 ? A DT 3 ? 1_555 CA ? H CA . ? A CA 107 ? 1_555 O2 ? J PEG . ? A PEG 109 ? 1_555 75.7 ? 51 OP1 ? A DG 5 ? A DG 5 ? 1_555 CA ? H CA . ? A CA 107 ? 1_555 O2 ? J PEG . ? A PEG 109 ? 1_555 135.6 ? 52 OP1 ? A DT 15 ? A DT 15 ? 1_555 CA ? H CA . ? A CA 107 ? 1_555 O2 ? J PEG . ? A PEG 109 ? 1_555 147.2 ? 53 O1 ? J PEG . ? A PEG 109 ? 1_555 CA ? H CA . ? A CA 107 ? 1_555 O2 ? J PEG . ? A PEG 109 ? 1_555 69.3 ? 54 OP2 ? A DT 3 ? A DT 3 ? 1_555 CA ? H CA . ? A CA 107 ? 1_555 O4 ? J PEG . ? A PEG 109 ? 1_555 88.4 ? 55 OP1 ? A DG 5 ? A DG 5 ? 1_555 CA ? H CA . ? A CA 107 ? 1_555 O4 ? J PEG . ? A PEG 109 ? 1_555 72.0 ? 56 OP1 ? A DT 15 ? A DT 15 ? 1_555 CA ? H CA . ? A CA 107 ? 1_555 O4 ? J PEG . ? A PEG 109 ? 1_555 83.5 ? 57 O1 ? J PEG . ? A PEG 109 ? 1_555 CA ? H CA . ? A CA 107 ? 1_555 O4 ? J PEG . ? A PEG 109 ? 1_555 133.0 ? 58 O2 ? J PEG . ? A PEG 109 ? 1_555 CA ? H CA . ? A CA 107 ? 1_555 O4 ? J PEG . ? A PEG 109 ? 1_555 63.7 ? 59 OP2 ? A DT 3 ? A DT 3 ? 1_555 CA ? H CA . ? A CA 107 ? 1_555 O ? T HOH . ? A HOH 201 ? 1_555 86.0 ? 60 OP1 ? A DG 5 ? A DG 5 ? 1_555 CA ? H CA . ? A CA 107 ? 1_555 O ? T HOH . ? A HOH 201 ? 1_555 106.4 ? 61 OP1 ? A DT 15 ? A DT 15 ? 1_555 CA ? H CA . ? A CA 107 ? 1_555 O ? T HOH . ? A HOH 201 ? 1_555 95.2 ? 62 O1 ? J PEG . ? A PEG 109 ? 1_555 CA ? H CA . ? A CA 107 ? 1_555 O ? T HOH . ? A HOH 201 ? 1_555 48.2 ? 63 O2 ? J PEG . ? A PEG 109 ? 1_555 CA ? H CA . ? A CA 107 ? 1_555 O ? T HOH . ? A HOH 201 ? 1_555 117.2 ? 64 O4 ? J PEG . ? A PEG 109 ? 1_555 CA ? H CA . ? A CA 107 ? 1_555 O ? T HOH . ? A HOH 201 ? 1_555 173.8 ? 65 O6 ? A DG 5 ? A DG 5 ? 1_555 K ? D K . ? A K 103 ? 1_555 O6 ? A DG 6 ? A DG 6 ? 1_555 78.6 ? 66 O6 ? A DG 5 ? A DG 5 ? 1_555 K ? D K . ? A K 103 ? 1_555 O6 ? A DG 10 ? A DG 10 ? 1_555 68.8 ? 67 O6 ? A DG 6 ? A DG 6 ? 1_555 K ? D K . ? A K 103 ? 1_555 O6 ? A DG 10 ? A DG 10 ? 1_555 89.3 ? 68 O6 ? A DG 5 ? A DG 5 ? 1_555 K ? D K . ? A K 103 ? 1_555 O6 ? A DG 11 ? A DG 11 ? 1_555 133.4 ? 69 O6 ? A DG 6 ? A DG 6 ? 1_555 K ? D K . ? A K 103 ? 1_555 O6 ? A DG 11 ? A DG 11 ? 1_555 70.6 ? 70 O6 ? A DG 10 ? A DG 10 ? 1_555 K ? D K . ? A K 103 ? 1_555 O6 ? A DG 11 ? A DG 11 ? 1_555 76.6 ? 71 O6 ? A DG 5 ? A DG 5 ? 1_555 K ? D K . ? A K 103 ? 1_555 O6 ? A DG 17 ? A DG 17 ? 1_555 154.2 ? 72 O6 ? A DG 6 ? A DG 6 ? 1_555 K ? D K . ? A K 103 ? 1_555 O6 ? A DG 17 ? A DG 17 ? 1_555 106.1 ? 73 O6 ? A DG 10 ? A DG 10 ? 1_555 K ? D K . ? A K 103 ? 1_555 O6 ? A DG 17 ? A DG 17 ? 1_555 135.6 ? 74 O6 ? A DG 11 ? A DG 11 ? 1_555 K ? D K . ? A K 103 ? 1_555 O6 ? A DG 17 ? A DG 17 ? 1_555 70.2 ? 75 O6 ? A DG 5 ? A DG 5 ? 1_555 K ? D K . ? A K 103 ? 1_555 O6 ? A DG 18 ? A DG 18 ? 1_555 107.8 ? 76 O6 ? A DG 6 ? A DG 6 ? 1_555 K ? D K . ? A K 103 ? 1_555 O6 ? A DG 18 ? A DG 18 ? 1_555 154.6 ? 77 O6 ? A DG 10 ? A DG 10 ? 1_555 K ? D K . ? A K 103 ? 1_555 O6 ? A DG 18 ? A DG 18 ? 1_555 71.2 ? 78 O6 ? A DG 11 ? A DG 11 ? 1_555 K ? D K . ? A K 103 ? 1_555 O6 ? A DG 18 ? A DG 18 ? 1_555 88.7 ? 79 O6 ? A DG 17 ? A DG 17 ? 1_555 K ? D K . ? A K 103 ? 1_555 O6 ? A DG 18 ? A DG 18 ? 1_555 79.2 ? 80 O6 ? A DG 5 ? A DG 5 ? 1_555 K ? D K . ? A K 103 ? 1_555 O6 ? A DG 23 ? A DG 23 ? 1_555 68.4 ? 81 O6 ? A DG 6 ? A DG 6 ? 1_555 K ? D K . ? A K 103 ? 1_555 O6 ? A DG 23 ? A DG 23 ? 1_555 133.7 ? 82 O6 ? A DG 10 ? A DG 10 ? 1_555 K ? D K . ? A K 103 ? 1_555 O6 ? A DG 23 ? A DG 23 ? 1_555 107.0 ? 83 O6 ? A DG 11 ? A DG 11 ? 1_555 K ? D K . ? A K 103 ? 1_555 O6 ? A DG 23 ? A DG 23 ? 1_555 154.6 ? 84 O6 ? A DG 17 ? A DG 17 ? 1_555 K ? D K . ? A K 103 ? 1_555 O6 ? A DG 23 ? A DG 23 ? 1_555 92.1 ? 85 O6 ? A DG 18 ? A DG 18 ? 1_555 K ? D K . ? A K 103 ? 1_555 O6 ? A DG 23 ? A DG 23 ? 1_555 69.5 ? 86 O6 ? A DG 5 ? A DG 5 ? 1_555 K ? D K . ? A K 103 ? 1_555 O6 ? A DG 24 ? A DG 24 ? 1_555 92.5 ? 87 O6 ? A DG 6 ? A DG 6 ? 1_555 K ? D K . ? A K 103 ? 1_555 O6 ? A DG 24 ? A DG 24 ? 1_555 69.2 ? 88 O6 ? A DG 10 ? A DG 10 ? 1_555 K ? D K . ? A K 103 ? 1_555 O6 ? A DG 24 ? A DG 24 ? 1_555 154.3 ? 89 O6 ? A DG 11 ? A DG 11 ? 1_555 K ? D K . ? A K 103 ? 1_555 O6 ? A DG 24 ? A DG 24 ? 1_555 107.5 ? 90 O6 ? A DG 17 ? A DG 17 ? 1_555 K ? D K . ? A K 103 ? 1_555 O6 ? A DG 24 ? A DG 24 ? 1_555 66.7 ? 91 O6 ? A DG 18 ? A DG 18 ? 1_555 K ? D K . ? A K 103 ? 1_555 O6 ? A DG 24 ? A DG 24 ? 1_555 133.3 ? 92 O6 ? A DG 23 ? A DG 23 ? 1_555 K ? D K . ? A K 103 ? 1_555 O6 ? A DG 24 ? A DG 24 ? 1_555 80.4 ? 93 O6 ? A DG 6 ? A DG 6 ? 1_555 K ? E K . ? A K 104 ? 1_555 O6 ? A DG 7 ? A DG 7 ? 1_555 73.1 ? 94 O6 ? A DG 6 ? A DG 6 ? 1_555 K ? E K . ? A K 104 ? 1_555 O6 ? A DG 11 ? A DG 11 ? 1_555 69.5 ? 95 O6 ? A DG 7 ? A DG 7 ? 1_555 K ? E K . ? A K 104 ? 1_555 O6 ? A DG 11 ? A DG 11 ? 1_555 94.2 ? 96 O6 ? A DG 6 ? A DG 6 ? 1_555 K ? E K . ? A K 104 ? 1_555 O6 ? A DG 12 ? A DG 12 ? 1_555 126.2 ? 97 O6 ? A DG 7 ? A DG 7 ? 1_555 K ? E K . ? A K 104 ? 1_555 O6 ? A DG 12 ? A DG 12 ? 1_555 78.1 ? 98 O6 ? A DG 11 ? A DG 11 ? 1_555 K ? E K . ? A K 104 ? 1_555 O6 ? A DG 12 ? A DG 12 ? 1_555 68.4 ? 99 O6 ? A DG 6 ? A DG 6 ? 1_555 K ? E K . ? A K 104 ? 1_555 O6 ? A DG 16 ? A DG 16 ? 1_555 159.1 ? 100 O6 ? A DG 7 ? A DG 7 ? 1_555 K ? E K . ? A K 104 ? 1_555 O6 ? A DG 16 ? A DG 16 ? 1_555 115.0 ? 101 O6 ? A DG 11 ? A DG 11 ? 1_555 K ? E K . ? A K 104 ? 1_555 O6 ? A DG 16 ? A DG 16 ? 1_555 126.4 ? 102 O6 ? A DG 12 ? A DG 12 ? 1_555 K ? E K . ? A K 104 ? 1_555 O6 ? A DG 16 ? A DG 16 ? 1_555 74.7 ? 103 O6 ? A DG 6 ? A DG 6 ? 1_555 K ? E K . ? A K 104 ? 1_555 O6 ? A DG 17 ? A DG 17 ? 1_555 102.8 ? 104 O6 ? A DG 7 ? A DG 7 ? 1_555 K ? E K . ? A K 104 ? 1_555 O6 ? A DG 17 ? A DG 17 ? 1_555 164.4 ? 105 O6 ? A DG 11 ? A DG 11 ? 1_555 K ? E K . ? A K 104 ? 1_555 O6 ? A DG 17 ? A DG 17 ? 1_555 70.4 ? 106 O6 ? A DG 12 ? A DG 12 ? 1_555 K ? E K . ? A K 104 ? 1_555 O6 ? A DG 17 ? A DG 17 ? 1_555 93.1 ? 107 O6 ? A DG 16 ? A DG 16 ? 1_555 K ? E K . ? A K 104 ? 1_555 O6 ? A DG 17 ? A DG 17 ? 1_555 74.3 ? 108 O6 ? A DG 6 ? A DG 6 ? 1_555 K ? E K . ? A K 104 ? 1_555 O6 ? A DG 24 ? A DG 24 ? 1_555 64.2 ? 109 O6 ? A DG 7 ? A DG 7 ? 1_555 K ? E K . ? A K 104 ? 1_555 O6 ? A DG 24 ? A DG 24 ? 1_555 125.1 ? 110 O6 ? A DG 11 ? A DG 11 ? 1_555 K ? E K . ? A K 104 ? 1_555 O6 ? A DG 24 ? A DG 24 ? 1_555 101.1 ? 111 O6 ? A DG 12 ? A DG 12 ? 1_555 K ? E K . ? A K 104 ? 1_555 O6 ? A DG 24 ? A DG 24 ? 1_555 156.0 ? 112 O6 ? A DG 16 ? A DG 16 ? 1_555 K ? E K . ? A K 104 ? 1_555 O6 ? A DG 24 ? A DG 24 ? 1_555 97.1 ? 113 O6 ? A DG 17 ? A DG 17 ? 1_555 K ? E K . ? A K 104 ? 1_555 O6 ? A DG 24 ? A DG 24 ? 1_555 62.9 ? 114 O6 ? A DG 6 ? A DG 6 ? 1_555 K ? E K . ? A K 104 ? 1_555 O6 ? A DG 25 ? A DG 25 ? 1_555 87.9 ? 115 O6 ? A DG 7 ? A DG 7 ? 1_555 K ? E K . ? A K 104 ? 1_555 O6 ? A DG 25 ? A DG 25 ? 1_555 72.8 ? 116 O6 ? A DG 11 ? A DG 11 ? 1_555 K ? E K . ? A K 104 ? 1_555 O6 ? A DG 25 ? A DG 25 ? 1_555 156.6 ? 117 O6 ? A DG 12 ? A DG 12 ? 1_555 K ? E K . ? A K 104 ? 1_555 O6 ? A DG 25 ? A DG 25 ? 1_555 125.2 ? 118 O6 ? A DG 16 ? A DG 16 ? 1_555 K ? E K . ? A K 104 ? 1_555 O6 ? A DG 25 ? A DG 25 ? 1_555 77.0 ? 119 O6 ? A DG 17 ? A DG 17 ? 1_555 K ? E K . ? A K 104 ? 1_555 O6 ? A DG 25 ? A DG 25 ? 1_555 122.6 ? 120 O6 ? A DG 24 ? A DG 24 ? 1_555 K ? E K . ? A K 104 ? 1_555 O6 ? A DG 25 ? A DG 25 ? 1_555 72.9 ? 121 OP2 ? A DG 12 ? A DG 12 ? 1_555 CA ? G CA . ? A CA 106 ? 12_545 O6 ? A DG 13 ? A DG 13 ? 1_555 80.7 ? 122 OP2 ? A DG 12 ? A DG 12 ? 1_555 CA ? G CA . ? A CA 106 ? 12_545 OP2 ? A DT 20 ? A DT 20 ? 1_555 45.8 ? 123 O6 ? A DG 13 ? A DG 13 ? 1_555 CA ? G CA . ? A CA 106 ? 12_545 OP2 ? A DT 20 ? A DT 20 ? 1_555 93.2 ? 124 OP2 ? A DG 12 ? A DG 12 ? 1_555 CA ? G CA . ? A CA 106 ? 12_545 O ? T HOH . ? A HOH 224 ? 1_555 35.8 ? 125 O6 ? A DG 13 ? A DG 13 ? 1_555 CA ? G CA . ? A CA 106 ? 12_545 O ? T HOH . ? A HOH 224 ? 1_555 98.5 ? 126 OP2 ? A DT 20 ? A DT 20 ? 1_555 CA ? G CA . ? A CA 106 ? 12_545 O ? T HOH . ? A HOH 224 ? 1_555 14.0 ? 127 OP2 ? A DG 12 ? A DG 12 ? 1_555 CA ? G CA . ? A CA 106 ? 12_545 O ? T HOH . ? A HOH 225 ? 1_555 51.9 ? 128 O6 ? A DG 13 ? A DG 13 ? 1_555 CA ? G CA . ? A CA 106 ? 12_545 O ? T HOH . ? A HOH 225 ? 1_555 103.6 ? 129 OP2 ? A DT 20 ? A DT 20 ? 1_555 CA ? G CA . ? A CA 106 ? 12_545 O ? T HOH . ? A HOH 225 ? 1_555 10.7 ? 130 O ? T HOH . ? A HOH 224 ? 1_555 CA ? G CA . ? A CA 106 ? 12_545 O ? T HOH . ? A HOH 225 ? 1_555 16.2 ? # _pdbx_entry_details.entry_id 9C73 _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.has_ligand_of_interest Y _pdbx_entry_details.has_protein_modification N # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O1 A PEG 109 ? ? O A HOH 201 ? ? 2.10 2 1 OP2 A DG 25 ? ? O A HOH 202 ? ? 2.12 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "C1'" A DG 17 ? ? "O4'" A DG 17 ? ? "C4'" A DG 17 ? ? 103.57 110.10 -6.53 1.00 N 2 1 "O4'" A DG 17 ? ? "C1'" A DG 17 ? ? N9 A DG 17 ? ? 113.38 108.30 5.08 0.30 N # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id A _pdbx_struct_special_symmetry.auth_comp_id HOH _pdbx_struct_special_symmetry.auth_seq_id 210 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id T _pdbx_struct_special_symmetry.label_comp_id HOH _pdbx_struct_special_symmetry.label_seq_id . # _pdbx_refine_tls.id 1 _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls.details ? _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x -1.19159440873 _pdbx_refine_tls.origin_y -22.285637134 _pdbx_refine_tls.origin_z -3.52150231103 _pdbx_refine_tls.T[1][1] 0.178506745333 _pdbx_refine_tls.T[1][1]_esd ? _pdbx_refine_tls.T[1][2] 0.0119259841346 _pdbx_refine_tls.T[1][2]_esd ? _pdbx_refine_tls.T[1][3] -0.0301891881355 _pdbx_refine_tls.T[1][3]_esd ? _pdbx_refine_tls.T[2][2] 0.29366567765 _pdbx_refine_tls.T[2][2]_esd ? _pdbx_refine_tls.T[2][3] -0.0750054429368 _pdbx_refine_tls.T[2][3]_esd ? _pdbx_refine_tls.T[3][3] 0.264263948115 _pdbx_refine_tls.T[3][3]_esd ? _pdbx_refine_tls.L[1][1] 4.79497271302 _pdbx_refine_tls.L[1][1]_esd ? _pdbx_refine_tls.L[1][2] 0.321423918055 _pdbx_refine_tls.L[1][2]_esd ? _pdbx_refine_tls.L[1][3] 0.778174291222 _pdbx_refine_tls.L[1][3]_esd ? _pdbx_refine_tls.L[2][2] 4.20993875898 _pdbx_refine_tls.L[2][2]_esd ? _pdbx_refine_tls.L[2][3] 0.732134063352 _pdbx_refine_tls.L[2][3]_esd ? _pdbx_refine_tls.L[3][3] 4.81287137077 _pdbx_refine_tls.L[3][3]_esd ? _pdbx_refine_tls.S[1][1] -0.146118695636 _pdbx_refine_tls.S[1][1]_esd ? _pdbx_refine_tls.S[1][2] -0.498092044623 _pdbx_refine_tls.S[1][2]_esd ? _pdbx_refine_tls.S[1][3] 0.580158903709 _pdbx_refine_tls.S[1][3]_esd ? _pdbx_refine_tls.S[2][1] 0.0433784143514 _pdbx_refine_tls.S[2][1]_esd ? _pdbx_refine_tls.S[2][2] -0.00918459357695 _pdbx_refine_tls.S[2][2]_esd ? _pdbx_refine_tls.S[2][3] 0.0751112756031 _pdbx_refine_tls.S[2][3]_esd ? _pdbx_refine_tls.S[3][1] -0.484472991262 _pdbx_refine_tls.S[3][1]_esd ? _pdbx_refine_tls.S[3][2] -0.00357501229332 _pdbx_refine_tls.S[3][2]_esd ? _pdbx_refine_tls.S[3][3] 0.0506563186904 _pdbx_refine_tls.S[3][3]_esd ? # _pdbx_refine_tls_group.id 1 _pdbx_refine_tls_group.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls_group.refine_tls_id 1 _pdbx_refine_tls_group.beg_label_asym_id A _pdbx_refine_tls_group.beg_label_seq_id ? _pdbx_refine_tls_group.beg_auth_asym_id A _pdbx_refine_tls_group.beg_auth_seq_id 1 _pdbx_refine_tls_group.beg_PDB_ins_code ? _pdbx_refine_tls_group.end_label_asym_id T _pdbx_refine_tls_group.end_label_seq_id ? _pdbx_refine_tls_group.end_auth_asym_id F _pdbx_refine_tls_group.end_auth_seq_id 33 _pdbx_refine_tls_group.end_PDB_ins_code ? _pdbx_refine_tls_group.selection ? _pdbx_refine_tls_group.selection_details all # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal A1AVT C10 C N N 1 A1AVT C13 C Y N 2 A1AVT C15 C Y N 3 A1AVT C17 C Y N 4 A1AVT C20 C Y N 5 A1AVT C21 C Y N 6 A1AVT C22 C Y N 7 A1AVT C26 C Y N 8 A1AVT C28 C Y N 9 A1AVT C02 C N N 10 A1AVT C03 C Y N 11 A1AVT C04 C Y N 12 A1AVT C05 C N N 13 A1AVT C06 C N N 14 A1AVT C07 C N N 15 A1AVT C08 C N N 16 A1AVT C09 C N N 17 A1AVT C12 C Y N 18 A1AVT C16 C Y N 19 A1AVT C18 C Y N 20 A1AVT C19 C Y N 21 A1AVT C23 C Y N 22 A1AVT C25 C Y N 23 A1AVT C27 C Y N 24 A1AVT C29 C Y N 25 A1AVT C30 C Y N 26 A1AVT C31 C Y N 27 A1AVT N11 N N N 28 A1AVT N14 N Y N 29 A1AVT N24 N Y N 30 A1AVT O01 O N N 31 A1AVT H1 H N N 32 A1AVT H2 H N N 33 A1AVT H3 H N N 34 A1AVT H4 H N N 35 A1AVT H5 H N N 36 A1AVT H6 H N N 37 A1AVT H7 H N N 38 A1AVT H8 H N N 39 A1AVT H10 H N N 40 A1AVT H11 H N N 41 A1AVT H12 H N N 42 A1AVT H13 H N N 43 A1AVT H14 H N N 44 A1AVT H15 H N N 45 A1AVT H16 H N N 46 A1AVT H17 H N N 47 A1AVT H18 H N N 48 CA CA CA N N 49 DG OP3 O N N 50 DG P P N N 51 DG OP1 O N N 52 DG OP2 O N N 53 DG "O5'" O N N 54 DG "C5'" C N N 55 DG "C4'" C N R 56 DG "O4'" O N N 57 DG "C3'" C N S 58 DG "O3'" O N N 59 DG "C2'" C N N 60 DG "C1'" C N R 61 DG N9 N Y N 62 DG C8 C Y N 63 DG N7 N Y N 64 DG C5 C Y N 65 DG C6 C N N 66 DG O6 O N N 67 DG N1 N N N 68 DG C2 C N N 69 DG N2 N N N 70 DG N3 N N N 71 DG C4 C Y N 72 DG HOP3 H N N 73 DG HOP2 H N N 74 DG "H5'" H N N 75 DG "H5''" H N N 76 DG "H4'" H N N 77 DG "H3'" H N N 78 DG "HO3'" H N N 79 DG "H2'" H N N 80 DG "H2''" H N N 81 DG "H1'" H N N 82 DG H8 H N N 83 DG H1 H N N 84 DG H21 H N N 85 DG H22 H N N 86 DT OP3 O N N 87 DT P P N N 88 DT OP1 O N N 89 DT OP2 O N N 90 DT "O5'" O N N 91 DT "C5'" C N N 92 DT "C4'" C N R 93 DT "O4'" O N N 94 DT "C3'" C N S 95 DT "O3'" O N N 96 DT "C2'" C N N 97 DT "C1'" C N R 98 DT N1 N N N 99 DT C2 C N N 100 DT O2 O N N 101 DT N3 N N N 102 DT C4 C N N 103 DT O4 O N N 104 DT C5 C N N 105 DT C7 C N N 106 DT C6 C N N 107 DT HOP3 H N N 108 DT HOP2 H N N 109 DT "H5'" H N N 110 DT "H5''" H N N 111 DT "H4'" H N N 112 DT "H3'" H N N 113 DT "HO3'" H N N 114 DT "H2'" H N N 115 DT "H2''" H N N 116 DT "H1'" H N N 117 DT H3 H N N 118 DT H71 H N N 119 DT H72 H N N 120 DT H73 H N N 121 DT H6 H N N 122 EPE N1 N N N 123 EPE C2 C N N 124 EPE C3 C N N 125 EPE N4 N N N 126 EPE C5 C N N 127 EPE C6 C N N 128 EPE C7 C N N 129 EPE C8 C N N 130 EPE O8 O N N 131 EPE C9 C N N 132 EPE C10 C N N 133 EPE S S N N 134 EPE O1S O N N 135 EPE O2S O N N 136 EPE O3S O N N 137 EPE H21 H N N 138 EPE H22 H N N 139 EPE H31 H N N 140 EPE H32 H N N 141 EPE H51 H N N 142 EPE H52 H N N 143 EPE H61 H N N 144 EPE H62 H N N 145 EPE H71 H N N 146 EPE H72 H N N 147 EPE H81 H N N 148 EPE H82 H N N 149 EPE HO8 H N N 150 EPE H91 H N N 151 EPE H92 H N N 152 EPE H101 H N N 153 EPE H102 H N N 154 EPE HOS3 H N N 155 HOH O O N N 156 HOH H1 H N N 157 HOH H2 H N N 158 K K K N N 159 PEG C1 C N N 160 PEG O1 O N N 161 PEG C2 C N N 162 PEG O2 O N N 163 PEG C3 C N N 164 PEG C4 C N N 165 PEG O4 O N N 166 PEG H11 H N N 167 PEG H12 H N N 168 PEG HO1 H N N 169 PEG H21 H N N 170 PEG H22 H N N 171 PEG H31 H N N 172 PEG H32 H N N 173 PEG H41 H N N 174 PEG H42 H N N 175 PEG HO4 H N N 176 PG4 O1 O N N 177 PG4 C1 C N N 178 PG4 C2 C N N 179 PG4 O2 O N N 180 PG4 C3 C N N 181 PG4 C4 C N N 182 PG4 O3 O N N 183 PG4 C5 C N N 184 PG4 C6 C N N 185 PG4 O4 O N N 186 PG4 C7 C N N 187 PG4 C8 C N N 188 PG4 O5 O N N 189 PG4 HO1 H N N 190 PG4 H11 H N N 191 PG4 H12 H N N 192 PG4 H21 H N N 193 PG4 H22 H N N 194 PG4 H31 H N N 195 PG4 H32 H N N 196 PG4 H41 H N N 197 PG4 H42 H N N 198 PG4 H51 H N N 199 PG4 H52 H N N 200 PG4 H61 H N N 201 PG4 H62 H N N 202 PG4 H71 H N N 203 PG4 H72 H N N 204 PG4 H81 H N N 205 PG4 H82 H N N 206 PG4 HO5 H N N 207 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1AVT C17 C18 doub Y N 1 A1AVT C17 C16 sing Y N 2 A1AVT C18 C19 sing Y N 3 A1AVT C26 C25 doub Y N 4 A1AVT C26 C27 sing Y N 5 A1AVT C25 N24 sing Y N 6 A1AVT C16 C15 doub Y N 7 A1AVT C19 C20 doub Y N 8 A1AVT C19 N14 sing Y N 9 A1AVT C20 C21 sing Y N 10 A1AVT C23 N24 doub Y N 11 A1AVT C23 C22 sing Y N 12 A1AVT N24 C29 sing Y N 13 A1AVT C27 C28 doub Y N 14 A1AVT C15 N14 sing Y N 15 A1AVT N14 C13 doub Y N 16 A1AVT C21 C22 doub Y N 17 A1AVT C21 C12 sing Y N 18 A1AVT C22 C31 sing Y N 19 A1AVT C29 C28 sing Y N 20 A1AVT C29 C30 doub Y N 21 A1AVT C13 C12 sing Y N 22 A1AVT C12 C04 doub Y N 23 A1AVT C30 C31 sing Y N 24 A1AVT C31 C03 doub Y N 25 A1AVT C04 C03 sing Y N 26 A1AVT C04 C05 sing N N 27 A1AVT C03 C02 sing N N 28 A1AVT C05 C06 doub N N 29 A1AVT C02 O01 doub N N 30 A1AVT C02 N11 sing N N 31 A1AVT C06 N11 sing N N 32 A1AVT C06 C07 sing N N 33 A1AVT N11 C10 sing N N 34 A1AVT C07 C08 doub N N 35 A1AVT C10 C09 doub N N 36 A1AVT C08 C09 sing N N 37 A1AVT C10 H1 sing N N 38 A1AVT C13 H2 sing N N 39 A1AVT C15 H3 sing N N 40 A1AVT C17 H4 sing N N 41 A1AVT C20 H5 sing N N 42 A1AVT C26 H6 sing N N 43 A1AVT C28 H7 sing N N 44 A1AVT C05 H8 sing N N 45 A1AVT C07 H10 sing N N 46 A1AVT C08 H11 sing N N 47 A1AVT C09 H12 sing N N 48 A1AVT C16 H13 sing N N 49 A1AVT C18 H14 sing N N 50 A1AVT C23 H15 sing N N 51 A1AVT C25 H16 sing N N 52 A1AVT C27 H17 sing N N 53 A1AVT C30 H18 sing N N 54 DG OP3 P sing N N 55 DG OP3 HOP3 sing N N 56 DG P OP1 doub N N 57 DG P OP2 sing N N 58 DG P "O5'" sing N N 59 DG OP2 HOP2 sing N N 60 DG "O5'" "C5'" sing N N 61 DG "C5'" "C4'" sing N N 62 DG "C5'" "H5'" sing N N 63 DG "C5'" "H5''" sing N N 64 DG "C4'" "O4'" sing N N 65 DG "C4'" "C3'" sing N N 66 DG "C4'" "H4'" sing N N 67 DG "O4'" "C1'" sing N N 68 DG "C3'" "O3'" sing N N 69 DG "C3'" "C2'" sing N N 70 DG "C3'" "H3'" sing N N 71 DG "O3'" "HO3'" sing N N 72 DG "C2'" "C1'" sing N N 73 DG "C2'" "H2'" sing N N 74 DG "C2'" "H2''" sing N N 75 DG "C1'" N9 sing N N 76 DG "C1'" "H1'" sing N N 77 DG N9 C8 sing Y N 78 DG N9 C4 sing Y N 79 DG C8 N7 doub Y N 80 DG C8 H8 sing N N 81 DG N7 C5 sing Y N 82 DG C5 C6 sing N N 83 DG C5 C4 doub Y N 84 DG C6 O6 doub N N 85 DG C6 N1 sing N N 86 DG N1 C2 sing N N 87 DG N1 H1 sing N N 88 DG C2 N2 sing N N 89 DG C2 N3 doub N N 90 DG N2 H21 sing N N 91 DG N2 H22 sing N N 92 DG N3 C4 sing N N 93 DT OP3 P sing N N 94 DT OP3 HOP3 sing N N 95 DT P OP1 doub N N 96 DT P OP2 sing N N 97 DT P "O5'" sing N N 98 DT OP2 HOP2 sing N N 99 DT "O5'" "C5'" sing N N 100 DT "C5'" "C4'" sing N N 101 DT "C5'" "H5'" sing N N 102 DT "C5'" "H5''" sing N N 103 DT "C4'" "O4'" sing N N 104 DT "C4'" "C3'" sing N N 105 DT "C4'" "H4'" sing N N 106 DT "O4'" "C1'" sing N N 107 DT "C3'" "O3'" sing N N 108 DT "C3'" "C2'" sing N N 109 DT "C3'" "H3'" sing N N 110 DT "O3'" "HO3'" sing N N 111 DT "C2'" "C1'" sing N N 112 DT "C2'" "H2'" sing N N 113 DT "C2'" "H2''" sing N N 114 DT "C1'" N1 sing N N 115 DT "C1'" "H1'" sing N N 116 DT N1 C2 sing N N 117 DT N1 C6 sing N N 118 DT C2 O2 doub N N 119 DT C2 N3 sing N N 120 DT N3 C4 sing N N 121 DT N3 H3 sing N N 122 DT C4 O4 doub N N 123 DT C4 C5 sing N N 124 DT C5 C7 sing N N 125 DT C5 C6 doub N N 126 DT C7 H71 sing N N 127 DT C7 H72 sing N N 128 DT C7 H73 sing N N 129 DT C6 H6 sing N N 130 EPE N1 C2 sing N N 131 EPE N1 C6 sing N N 132 EPE N1 C9 sing N N 133 EPE C2 C3 sing N N 134 EPE C2 H21 sing N N 135 EPE C2 H22 sing N N 136 EPE C3 N4 sing N N 137 EPE C3 H31 sing N N 138 EPE C3 H32 sing N N 139 EPE N4 C5 sing N N 140 EPE N4 C7 sing N N 141 EPE C5 C6 sing N N 142 EPE C5 H51 sing N N 143 EPE C5 H52 sing N N 144 EPE C6 H61 sing N N 145 EPE C6 H62 sing N N 146 EPE C7 C8 sing N N 147 EPE C7 H71 sing N N 148 EPE C7 H72 sing N N 149 EPE C8 O8 sing N N 150 EPE C8 H81 sing N N 151 EPE C8 H82 sing N N 152 EPE O8 HO8 sing N N 153 EPE C9 C10 sing N N 154 EPE C9 H91 sing N N 155 EPE C9 H92 sing N N 156 EPE C10 S sing N N 157 EPE C10 H101 sing N N 158 EPE C10 H102 sing N N 159 EPE S O1S doub N N 160 EPE S O2S doub N N 161 EPE S O3S sing N N 162 EPE O3S HOS3 sing N N 163 HOH O H1 sing N N 164 HOH O H2 sing N N 165 PEG C1 O1 sing N N 166 PEG C1 C2 sing N N 167 PEG C1 H11 sing N N 168 PEG C1 H12 sing N N 169 PEG O1 HO1 sing N N 170 PEG C2 O2 sing N N 171 PEG C2 H21 sing N N 172 PEG C2 H22 sing N N 173 PEG O2 C3 sing N N 174 PEG C3 C4 sing N N 175 PEG C3 H31 sing N N 176 PEG C3 H32 sing N N 177 PEG C4 O4 sing N N 178 PEG C4 H41 sing N N 179 PEG C4 H42 sing N N 180 PEG O4 HO4 sing N N 181 PG4 O1 C1 sing N N 182 PG4 O1 HO1 sing N N 183 PG4 C1 C2 sing N N 184 PG4 C1 H11 sing N N 185 PG4 C1 H12 sing N N 186 PG4 C2 O2 sing N N 187 PG4 C2 H21 sing N N 188 PG4 C2 H22 sing N N 189 PG4 O2 C3 sing N N 190 PG4 C3 C4 sing N N 191 PG4 C3 H31 sing N N 192 PG4 C3 H32 sing N N 193 PG4 C4 O3 sing N N 194 PG4 C4 H41 sing N N 195 PG4 C4 H42 sing N N 196 PG4 O3 C5 sing N N 197 PG4 C5 C6 sing N N 198 PG4 C5 H51 sing N N 199 PG4 C5 H52 sing N N 200 PG4 C6 O4 sing N N 201 PG4 C6 H61 sing N N 202 PG4 C6 H62 sing N N 203 PG4 O4 C7 sing N N 204 PG4 C7 C8 sing N N 205 PG4 C7 H71 sing N N 206 PG4 C7 H72 sing N N 207 PG4 C8 O5 sing N N 208 PG4 C8 H81 sing N N 209 PG4 C8 H82 sing N N 210 PG4 O5 HO5 sing N N 211 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 9C73 'double helix' 9C73 'quadruple helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DG 4 1_555 A DG 22 1_555 1.660 3.261 0.193 -4.308 4.065 -90.992 1 A_DG4:DG22_A A 4 ? A 22 ? 6 3 1 A DG 5 1_555 A DG 23 1_555 -1.508 -3.522 -0.063 0.872 11.288 89.413 2 A_DG5:DG23_A A 5 ? A 23 ? 6 3 1 A DG 10 1_555 A DG 18 1_555 1.581 3.501 -0.170 0.911 1.592 -88.780 3 A_DG10:DG18_A A 10 ? A 18 ? 6 3 1 A DG 24 1_555 A DG 17 1_555 -1.284 -3.548 -0.015 -5.870 5.565 90.137 4 A_DG24:DG17_A A 24 ? A 17 ? 6 3 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DG 4 1_555 A DG 22 1_555 A DG 5 1_555 A DG 23 1_555 -1.592 -3.584 0.048 83.247 -154.255 176.373 -1.791 0.796 0.124 -77.129 -41.624 179.851 1 AA_DG4DG5:DG23DG22_AA A 4 ? A 22 ? A 5 ? A 23 ? 1 A DG 5 1_555 A DG 23 1_555 A DG 10 1_555 A DG 18 1_555 -1.522 -3.520 0.342 -1.822 0.059 179.840 -1.760 0.761 0.342 0.029 0.911 179.840 2 AA_DG5DG10:DG18DG23_AA A 5 ? A 23 ? A 10 ? A 18 ? 1 A DG 10 1_555 A DG 18 1_555 A DG 24 1_555 A DG 17 1_555 -1.213 -3.303 3.296 1.580 0.492 120.799 -1.904 0.712 3.279 0.283 -0.909 120.806 3 AA_DG10DG24:DG17DG18_AA A 10 ? A 18 ? A 24 ? A 17 ? # _pdbx_audit_support.funding_organization 'National Institutes of Health/National Cancer Institute (NIH/NCI)' _pdbx_audit_support.country 'United States' _pdbx_audit_support.grant_number 1R15CA253134 _pdbx_audit_support.ordinal 1 # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 6XT7 _pdbx_initial_refinement_model.details 'Same DNA without ligand' # _atom_sites.entry_id 9C73 _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.Cartn_transform_axes ? _atom_sites.fract_transf_matrix[1][1] 0.018211 _atom_sites.fract_transf_matrix[1][2] 0.010514 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.021028 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.010132 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C CA K N O P S # loop_ # loop_ #