HEADER VIRUS LIKE PARTICLE 12-JUN-24 9C8G TITLE CRYO-EM STRUCTURE OF EV-D68 A2 INACTIVATED VIRUS PARTICLE COMPND MOL_ID: 1; COMPND 2 MOLECULE: VP1; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: VP2; COMPND 7 CHAIN: B; COMPND 8 ENGINEERED: YES; COMPND 9 MOL_ID: 3; COMPND 10 MOLECULE: VP3; COMPND 11 CHAIN: C; COMPND 12 ENGINEERED: YES; COMPND 13 MOL_ID: 4; COMPND 14 MOLECULE: VP4; COMPND 15 CHAIN: D; COMPND 16 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HUMAN ENTEROVIRUS D68; SOURCE 3 ORGANISM_COMMON: EV68, EV-68; SOURCE 4 ORGANISM_TAXID: 42789; SOURCE 5 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 6 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: HUMAN ENTEROVIRUS D68; SOURCE 10 ORGANISM_COMMON: EV68, EV-68; SOURCE 11 ORGANISM_TAXID: 42789; SOURCE 12 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 13 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 14 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 15 MOL_ID: 3; SOURCE 16 ORGANISM_SCIENTIFIC: HUMAN ENTEROVIRUS D68; SOURCE 17 ORGANISM_COMMON: EV68, EV-68; SOURCE 18 ORGANISM_TAXID: 42789; SOURCE 19 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 20 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 21 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 22 MOL_ID: 4; SOURCE 23 ORGANISM_SCIENTIFIC: HUMAN ENTEROVIRUS D68; SOURCE 24 ORGANISM_COMMON: EV68, EV-68; SOURCE 25 ORGANISM_TAXID: 42789; SOURCE 26 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 27 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 28 EXPRESSION_SYSTEM_TAXID: 9606 KEYWDS EV-D68, B3 SUBCLADE, VLP, VIRUS LIKE PARTICLE EXPDTA ELECTRON MICROSCOPY AUTHOR J.CHENG,P.W.KRUG,H.LEI,D.L.MOSS,R.HUANG,Z.C.LANG,A.J.MORTON,C.SHEN, AUTHOR 2 T.C.PIERSON,T.ZHOU,T.J.RUCKWARDT,P.D.KWONG REVDAT 2 03-DEC-25 9C8G 1 JRNL REVDAT 1 21-MAY-25 9C8G 0 JRNL AUTH J.CHENG,P.W.KRUG,H.LEI,D.L.MOSS,Z.C.LANG,A.J.MORTON, JRNL AUTH 2 C.H.SHEN,S.PLETNEV,R.K.HUANG,T.C.PIERSON,T.ZHOU, JRNL AUTH 3 T.J.RUCKWARDT,P.D.KWONG JRNL TITL STRUCTURAL INSIGHTS FROM VACCINE CANDIDATES FOR EV-D68. JRNL REF COMMUN BIOL V. 8 860 2025 JRNL REFN ESSN 2399-3642 JRNL PMID 40467847 JRNL DOI 10.1038/S42003-025-08253-Y REMARK 2 REMARK 2 RESOLUTION. 2.64 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 SOFTWARE PACKAGES : NULL REMARK 3 RECONSTRUCTION SCHEMA : NULL REMARK 3 REMARK 3 EM MAP-MODEL FITTING AND REFINEMENT REMARK 3 PDB ENTRY : NULL REMARK 3 REFINEMENT SPACE : NULL REMARK 3 REFINEMENT PROTOCOL : NULL REMARK 3 REFINEMENT TARGET : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE : NULL REMARK 3 REMARK 3 FITTING PROCEDURE : NULL REMARK 3 REMARK 3 EM IMAGE RECONSTRUCTION STATISTICS REMARK 3 NOMINAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 ACTUAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 EFFECTIVE RESOLUTION (ANGSTROMS) : 2.640 REMARK 3 NUMBER OF PARTICLES : 10000 REMARK 3 CTF CORRECTION METHOD : PHASE FLIPPING AND AMPLITUDE REMARK 3 CORRECTION REMARK 3 REMARK 3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: NULL REMARK 3 REMARK 3 OTHER DETAILS: NULL REMARK 4 REMARK 4 9C8G COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 13-JUN-24. REMARK 100 THE DEPOSITION ID IS D_1000284640. REMARK 245 REMARK 245 EXPERIMENTAL DETAILS REMARK 245 RECONSTRUCTION METHOD : SINGLE PARTICLE REMARK 245 SPECIMEN TYPE : NULL REMARK 245 REMARK 245 ELECTRON MICROSCOPE SAMPLE REMARK 245 SAMPLE TYPE : PARTICLE REMARK 245 PARTICLE TYPE : POINT REMARK 245 NAME OF SAMPLE : ENTEROVIRUS REMARK 245 SAMPLE CONCENTRATION (MG ML-1) : NULL REMARK 245 SAMPLE SUPPORT DETAILS : NULL REMARK 245 SAMPLE VITRIFICATION DETAILS : NULL REMARK 245 SAMPLE BUFFER : NULL REMARK 245 PH : 7.40 REMARK 245 SAMPLE DETAILS : NULL REMARK 245 REMARK 245 DATA ACQUISITION REMARK 245 DATE OF EXPERIMENT : NULL REMARK 245 NUMBER OF MICROGRAPHS-IMAGES : NULL REMARK 245 TEMPERATURE (KELVIN) : NULL REMARK 245 MICROSCOPE MODEL : FEI TITAN KRIOS REMARK 245 DETECTOR TYPE : GATAN K3 BIOQUANTUM (6K X REMARK 245 4K) REMARK 245 MINIMUM DEFOCUS (NM) : 1000.00 REMARK 245 MAXIMUM DEFOCUS (NM) : 2500.00 REMARK 245 MINIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 MAXIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 NOMINAL CS : NULL REMARK 245 IMAGING MODE : 4D-STEM REMARK 245 ELECTRON DOSE (ELECTRONS NM**-2) : 5450.00 REMARK 245 ILLUMINATION MODE : FLOOD BEAM REMARK 245 NOMINAL MAGNIFICATION : NULL REMARK 245 CALIBRATED MAGNIFICATION : NULL REMARK 245 SOURCE : FIELD EMISSION GUN REMARK 245 ACCELERATION VOLTAGE (KV) : 300 REMARK 245 IMAGING DETAILS : NULL REMARK 247 REMARK 247 ELECTRON MICROSCOPY REMARK 247 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON REMARK 247 MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE REMARK 247 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES REMARK 247 ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION REMARK 247 OF THE STRUCTURE FACTORS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 THE ASSEMBLY REPRESENTED IN THIS ENTRY HAS REGULAR REMARK 300 ICOSAHEDRAL POINT SYMMETRY (SCHOENFLIES SYMBOL = I). REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.809017 -0.500000 0.309017 101.45017 REMARK 350 BIOMT2 2 0.500000 0.309017 -0.809017 265.60000 REMARK 350 BIOMT3 2 0.309017 0.809017 0.500000 -164.14983 REMARK 350 BIOMT1 3 0.500000 -0.309017 0.809017 0.00000 REMARK 350 BIOMT2 3 0.309017 -0.809017 -0.500000 531.20000 REMARK 350 BIOMT3 3 0.809017 0.500000 -0.309017 0.00000 REMARK 350 BIOMT1 4 0.500000 0.309017 0.809017 -164.14983 REMARK 350 BIOMT2 4 -0.309017 -0.809017 0.500000 429.74983 REMARK 350 BIOMT3 4 0.809017 -0.500000 -0.309017 265.60000 REMARK 350 BIOMT1 5 0.809017 0.500000 0.309017 -164.14983 REMARK 350 BIOMT2 5 -0.500000 0.309017 0.809017 101.45017 REMARK 350 BIOMT3 5 0.309017 -0.809017 0.500000 265.60000 REMARK 350 BIOMT1 6 -0.500000 -0.309017 0.809017 265.60000 REMARK 350 BIOMT2 6 -0.309017 -0.809017 -0.500000 695.34983 REMARK 350 BIOMT3 6 0.809017 -0.500000 0.309017 101.45017 REMARK 350 BIOMT1 7 -0.309017 0.809017 0.500000 0.00000 REMARK 350 BIOMT2 7 -0.809017 -0.500000 0.309017 531.20000 REMARK 350 BIOMT3 7 0.500000 -0.309017 0.809017 0.00000 REMARK 350 BIOMT1 8 0.309017 0.809017 -0.500000 101.45017 REMARK 350 BIOMT2 8 -0.809017 0.500000 0.309017 265.60000 REMARK 350 BIOMT3 8 0.500000 0.309017 0.809017 -164.14983 REMARK 350 BIOMT1 9 0.500000 -0.309017 -0.809017 429.74983 REMARK 350 BIOMT2 9 -0.309017 0.809017 -0.500000 265.60000 REMARK 350 BIOMT3 9 0.809017 0.500000 0.309017 -164.14983 REMARK 350 BIOMT1 10 0.000000 -1.000000 0.000000 531.20000 REMARK 350 BIOMT2 10 0.000000 0.000000 -1.000000 531.20000 REMARK 350 BIOMT3 10 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT1 11 0.309017 0.809017 -0.500000 101.45017 REMARK 350 BIOMT2 11 0.809017 -0.500000 -0.309017 265.60000 REMARK 350 BIOMT3 11 -0.500000 -0.309017 -0.809017 695.34983 REMARK 350 BIOMT1 12 0.500000 -0.309017 -0.809017 429.74983 REMARK 350 BIOMT2 12 0.309017 -0.809017 0.500000 265.60000 REMARK 350 BIOMT3 12 -0.809017 -0.500000 -0.309017 695.34983 REMARK 350 BIOMT1 13 0.000000 -1.000000 0.000000 531.20000 REMARK 350 BIOMT2 13 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT3 13 -1.000000 0.000000 0.000000 531.20000 REMARK 350 BIOMT1 14 -0.500000 -0.309017 0.809017 265.60000 REMARK 350 BIOMT2 14 0.309017 0.809017 0.500000 -164.14983 REMARK 350 BIOMT3 14 -0.809017 0.500000 -0.309017 429.74983 REMARK 350 BIOMT1 15 -0.309017 0.809017 0.500000 0.00000 REMARK 350 BIOMT2 15 0.809017 0.500000 -0.309017 0.00000 REMARK 350 BIOMT3 15 -0.500000 0.309017 -0.809017 531.20000 REMARK 350 BIOMT1 16 -0.809017 -0.500000 -0.309017 695.34983 REMARK 350 BIOMT2 16 -0.500000 0.309017 0.809017 101.45017 REMARK 350 BIOMT3 16 -0.309017 0.809017 -0.500000 265.60000 REMARK 350 BIOMT1 17 -1.000000 0.000000 0.000000 531.20000 REMARK 350 BIOMT2 17 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 17 0.000000 0.000000 -1.000000 531.20000 REMARK 350 BIOMT1 18 -0.809017 0.500000 -0.309017 429.74983 REMARK 350 BIOMT2 18 0.500000 0.309017 -0.809017 265.60000 REMARK 350 BIOMT3 18 -0.309017 -0.809017 -0.500000 695.34983 REMARK 350 BIOMT1 19 -0.500000 0.309017 -0.809017 531.20000 REMARK 350 BIOMT2 19 0.309017 -0.809017 -0.500000 531.20000 REMARK 350 BIOMT3 19 -0.809017 -0.500000 0.309017 531.20000 REMARK 350 BIOMT1 20 -0.500000 -0.309017 -0.809017 695.34983 REMARK 350 BIOMT2 20 -0.309017 -0.809017 0.500000 429.74983 REMARK 350 BIOMT3 20 -0.809017 0.500000 0.309017 265.60000 REMARK 350 BIOMT1 21 0.809017 -0.500000 -0.309017 265.60000 REMARK 350 BIOMT2 21 -0.500000 -0.309017 -0.809017 695.34983 REMARK 350 BIOMT3 21 0.309017 0.809017 -0.500000 101.45017 REMARK 350 BIOMT1 22 0.309017 -0.809017 0.500000 265.60000 REMARK 350 BIOMT2 22 -0.809017 -0.500000 -0.309017 695.34983 REMARK 350 BIOMT3 22 0.500000 -0.309017 -0.809017 429.74983 REMARK 350 BIOMT1 23 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT2 23 -1.000000 0.000000 0.000000 531.20000 REMARK 350 BIOMT3 23 0.000000 -1.000000 0.000000 531.20000 REMARK 350 BIOMT1 24 0.309017 0.809017 0.500000 -164.14983 REMARK 350 BIOMT2 24 -0.809017 0.500000 -0.309017 429.74983 REMARK 350 BIOMT3 24 -0.500000 -0.309017 0.809017 265.60000 REMARK 350 BIOMT1 25 0.809017 0.500000 -0.309017 0.00000 REMARK 350 BIOMT2 25 -0.500000 0.309017 -0.809017 531.20000 REMARK 350 BIOMT3 25 -0.309017 0.809017 0.500000 0.00000 REMARK 350 BIOMT1 26 -0.500000 0.309017 0.809017 101.45017 REMARK 350 BIOMT2 26 -0.309017 0.809017 -0.500000 265.60000 REMARK 350 BIOMT3 26 -0.809017 -0.500000 -0.309017 695.34983 REMARK 350 BIOMT1 27 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 27 0.000000 0.000000 -1.000000 531.20000 REMARK 350 BIOMT3 27 -1.000000 0.000000 0.000000 531.20000 REMARK 350 BIOMT1 28 0.500000 0.309017 -0.809017 265.60000 REMARK 350 BIOMT2 28 -0.309017 -0.809017 -0.500000 695.34983 REMARK 350 BIOMT3 28 -0.809017 0.500000 -0.309017 429.74983 REMARK 350 BIOMT1 29 0.309017 -0.809017 -0.500000 531.20000 REMARK 350 BIOMT2 29 -0.809017 -0.500000 0.309017 531.20000 REMARK 350 BIOMT3 29 -0.500000 0.309017 -0.809017 531.20000 REMARK 350 BIOMT1 30 -0.309017 -0.809017 0.500000 429.74983 REMARK 350 BIOMT2 30 -0.809017 0.500000 0.309017 265.60000 REMARK 350 BIOMT3 30 -0.500000 -0.309017 -0.809017 695.34983 REMARK 350 BIOMT1 31 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 31 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT3 31 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT1 32 0.500000 0.309017 -0.809017 265.60000 REMARK 350 BIOMT2 32 0.309017 0.809017 0.500000 -164.14983 REMARK 350 BIOMT3 32 0.809017 -0.500000 0.309017 101.45017 REMARK 350 BIOMT1 33 0.309017 -0.809017 -0.500000 531.20000 REMARK 350 BIOMT2 33 0.809017 0.500000 -0.309017 0.00000 REMARK 350 BIOMT3 33 0.500000 -0.309017 0.809017 0.00000 REMARK 350 BIOMT1 34 -0.309017 -0.809017 0.500000 429.74983 REMARK 350 BIOMT2 34 0.809017 -0.500000 -0.309017 265.60000 REMARK 350 BIOMT3 34 0.500000 0.309017 0.809017 -164.14983 REMARK 350 BIOMT1 35 -0.500000 0.309017 0.809017 101.45017 REMARK 350 BIOMT2 35 0.309017 -0.809017 0.500000 265.60000 REMARK 350 BIOMT3 35 0.809017 0.500000 0.309017 -164.14983 REMARK 350 BIOMT1 36 -0.309017 -0.809017 -0.500000 695.34983 REMARK 350 BIOMT2 36 0.809017 -0.500000 0.309017 101.45017 REMARK 350 BIOMT3 36 -0.500000 -0.309017 0.809017 265.60000 REMARK 350 BIOMT1 37 -0.809017 -0.500000 0.309017 531.20000 REMARK 350 BIOMT2 37 0.500000 -0.309017 0.809017 0.00000 REMARK 350 BIOMT3 37 -0.309017 0.809017 0.500000 0.00000 REMARK 350 BIOMT1 38 -0.809017 0.500000 0.309017 265.60000 REMARK 350 BIOMT2 38 0.500000 0.309017 0.809017 -164.14983 REMARK 350 BIOMT3 38 0.309017 0.809017 -0.500000 101.45017 REMARK 350 BIOMT1 39 -0.309017 0.809017 -0.500000 265.60000 REMARK 350 BIOMT2 39 0.809017 0.500000 0.309017 -164.14983 REMARK 350 BIOMT3 39 0.500000 -0.309017 -0.809017 429.74983 REMARK 350 BIOMT1 40 0.000000 0.000000 -1.000000 531.20000 REMARK 350 BIOMT2 40 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 40 0.000000 -1.000000 0.000000 531.20000 REMARK 350 BIOMT1 41 0.809017 -0.500000 0.309017 101.45017 REMARK 350 BIOMT2 41 -0.500000 -0.309017 0.809017 265.60000 REMARK 350 BIOMT3 41 -0.309017 -0.809017 -0.500000 695.34983 REMARK 350 BIOMT1 42 0.500000 -0.309017 0.809017 0.00000 REMARK 350 BIOMT2 42 -0.309017 0.809017 0.500000 0.00000 REMARK 350 BIOMT3 42 -0.809017 -0.500000 0.309017 531.20000 REMARK 350 BIOMT1 43 0.500000 0.309017 0.809017 -164.14983 REMARK 350 BIOMT2 43 0.309017 0.809017 -0.500000 101.45017 REMARK 350 BIOMT3 43 -0.809017 0.500000 0.309017 265.60000 REMARK 350 BIOMT1 44 0.809017 0.500000 0.309017 -164.14983 REMARK 350 BIOMT2 44 0.500000 -0.309017 -0.809017 429.74983 REMARK 350 BIOMT3 44 -0.309017 0.809017 -0.500000 265.60000 REMARK 350 BIOMT1 45 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 45 0.000000 -1.000000 0.000000 531.20000 REMARK 350 BIOMT3 45 0.000000 0.000000 -1.000000 531.20000 REMARK 350 BIOMT1 46 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT2 46 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 46 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT1 47 0.309017 0.809017 0.500000 -164.14983 REMARK 350 BIOMT2 47 0.809017 -0.500000 0.309017 101.45017 REMARK 350 BIOMT3 47 0.500000 0.309017 -0.809017 265.60000 REMARK 350 BIOMT1 48 0.809017 0.500000 -0.309017 0.00000 REMARK 350 BIOMT2 48 0.500000 -0.309017 0.809017 0.00000 REMARK 350 BIOMT3 48 0.309017 -0.809017 -0.500000 531.20000 REMARK 350 BIOMT1 49 0.809017 -0.500000 -0.309017 265.60000 REMARK 350 BIOMT2 49 0.500000 0.309017 0.809017 -164.14983 REMARK 350 BIOMT3 49 -0.309017 -0.809017 0.500000 429.74983 REMARK 350 BIOMT1 50 0.309017 -0.809017 0.500000 265.60000 REMARK 350 BIOMT2 50 0.809017 0.500000 0.309017 -164.14983 REMARK 350 BIOMT3 50 -0.500000 0.309017 0.809017 101.45017 REMARK 350 BIOMT1 51 -0.309017 0.809017 -0.500000 265.60000 REMARK 350 BIOMT2 51 -0.809017 -0.500000 -0.309017 695.34983 REMARK 350 BIOMT3 51 -0.500000 0.309017 0.809017 101.45017 REMARK 350 BIOMT1 52 0.000000 0.000000 -1.000000 531.20000 REMARK 350 BIOMT2 52 -1.000000 0.000000 0.000000 531.20000 REMARK 350 BIOMT3 52 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT1 53 -0.309017 -0.809017 -0.500000 695.34983 REMARK 350 BIOMT2 53 -0.809017 0.500000 -0.309017 429.74983 REMARK 350 BIOMT3 53 0.500000 0.309017 -0.809017 265.60000 REMARK 350 BIOMT1 54 -0.809017 -0.500000 0.309017 531.20000 REMARK 350 BIOMT2 54 -0.500000 0.309017 -0.809017 531.20000 REMARK 350 BIOMT3 54 0.309017 -0.809017 -0.500000 531.20000 REMARK 350 BIOMT1 55 -0.809017 0.500000 0.309017 265.60000 REMARK 350 BIOMT2 55 -0.500000 -0.309017 -0.809017 695.34983 REMARK 350 BIOMT3 55 -0.309017 -0.809017 0.500000 429.74983 REMARK 350 BIOMT1 56 -0.500000 -0.309017 -0.809017 695.34983 REMARK 350 BIOMT2 56 0.309017 0.809017 -0.500000 101.45017 REMARK 350 BIOMT3 56 0.809017 -0.500000 -0.309017 265.60000 REMARK 350 BIOMT1 57 -0.809017 -0.500000 -0.309017 695.34983 REMARK 350 BIOMT2 57 0.500000 -0.309017 -0.809017 429.74983 REMARK 350 BIOMT3 57 0.309017 -0.809017 0.500000 265.60000 REMARK 350 BIOMT1 58 -1.000000 0.000000 0.000000 531.20000 REMARK 350 BIOMT2 58 0.000000 -1.000000 0.000000 531.20000 REMARK 350 BIOMT3 58 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 59 -0.809017 0.500000 -0.309017 429.74983 REMARK 350 BIOMT2 59 -0.500000 -0.309017 0.809017 265.60000 REMARK 350 BIOMT3 59 0.309017 0.809017 0.500000 -164.14983 REMARK 350 BIOMT1 60 -0.500000 0.309017 -0.809017 531.20000 REMARK 350 BIOMT2 60 -0.309017 0.809017 0.500000 0.00000 REMARK 350 BIOMT3 60 0.809017 0.500000 -0.309017 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 LEU A 296 REMARK 465 VAL A 297 REMARK 465 SER B 1 REMARK 465 PRO B 2 REMARK 465 SER B 3 REMARK 465 ALA B 4 REMARK 465 GLU B 5 REMARK 465 ALA B 6 REMARK 465 CYS B 7 REMARK 465 GLY B 8 REMARK 465 TYR B 9 REMARK 465 SER B 10 REMARK 465 THR B 247 REMARK 465 GLN B 248 REMARK 465 MET D 1 REMARK 465 GLY D 2 REMARK 465 ALA D 3 REMARK 465 GLN D 4 REMARK 465 VAL D 5 REMARK 465 THR D 6 REMARK 465 ARG D 7 REMARK 465 GLN D 8 REMARK 465 GLN D 9 REMARK 465 THR D 10 REMARK 465 GLY D 11 REMARK 465 THR D 12 REMARK 465 HIS D 13 REMARK 465 GLU D 14 REMARK 465 ASN D 15 REMARK 465 ALA D 16 REMARK 465 ASN D 17 REMARK 465 ILE D 18 REMARK 465 ALA D 19 REMARK 465 THR D 20 REMARK 465 ASN D 21 REMARK 465 GLY D 22 REMARK 465 SER D 23 REMARK 465 HIS D 24 REMARK 465 ILE D 25 REMARK 465 THR D 26 REMARK 465 TYR D 27 REMARK 465 GLU D 59 REMARK 465 GLY D 60 REMARK 465 LEU D 61 REMARK 465 LYS D 62 REMARK 465 ALA D 63 REMARK 465 GLY D 64 REMARK 465 ALA D 65 REMARK 465 PRO D 66 REMARK 465 VAL D 67 REMARK 465 LEU D 68 REMARK 465 LYS D 69 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ILE A 4 CG1 - CB - CG2 ANGL. DEV. = -15.6 DEGREES REMARK 500 LEU A 122 CA - CB - CG ANGL. DEV. = 14.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 42 -8.80 72.23 REMARK 500 SER A 64 55.45 -95.12 REMARK 500 ASP A 158 74.86 -102.90 REMARK 500 SER A 175 58.80 -95.96 REMARK 500 ALA A 249 77.84 54.76 REMARK 500 CYS B 32 56.24 -118.53 REMARK 500 GLN B 55 71.79 50.88 REMARK 500 GLU B 57 -109.51 57.27 REMARK 500 PHE B 63 92.52 -69.48 REMARK 500 LEU B 161 19.00 57.59 REMARK 500 ASP B 163 12.73 -142.96 REMARK 500 THR B 165 -161.39 -78.99 REMARK 500 ARG B 243 -168.46 -124.45 REMARK 500 CYS C 27 43.10 -141.25 REMARK 500 LEU C 86 32.16 -97.13 REMARK 500 ASN C 199 152.79 66.43 REMARK 500 ALA C 217 -167.74 -126.95 REMARK 500 LEU C 226 70.01 58.44 REMARK 500 GLU C 241 -5.51 67.44 REMARK 500 GLU C 243 -0.88 67.99 REMARK 500 PRO D 56 45.63 -87.23 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EMD-45304 RELATED DB: EMDB REMARK 900 CRYO-EM STRUCTURE OF EV-D68 A2 INACTIVATED VIRUS PARTICLE DBREF1 9C8G A 1 297 UNP A0A8D5ZMD3_HED68 DBREF2 9C8G A A0A8D5ZMD3 565 860 DBREF1 9C8G B 1 248 UNP A0A286KB20_HED68 DBREF2 9C8G B A0A286KB20 70 317 DBREF1 9C8G C 1 247 UNP A0A097BW19_HED68 DBREF2 9C8G C A0A097BW19 318 564 DBREF 9C8G D 1 69 UNP Q68T42 POLG_HED68 1 69 SEQADV 9C8G VAL A 295 UNP A0A8D5ZMD ARG 858 CONFLICT SEQRES 1 A 296 ILE GLU SER ILE ILE LYS THR ALA THR ASP THR VAL LYS SEQRES 2 A 296 SER GLU ILE ASN ALA GLU LEU GLY VAL VAL PRO SER LEU SEQRES 3 A 296 ASN ALA VAL GLU THR GLY ALA SER SER ASN THR GLU PRO SEQRES 4 A 296 GLU GLU ALA ILE GLN THR ARG THR VAL ILE ASN GLN HIS SEQRES 5 A 296 GLY VAL SER GLU THR LEU VAL GLU ASN PHE LEU SER ARG SEQRES 6 A 296 ALA ALA LEU VAL SER LYS ARG SER PHE GLU TYR LYS ASN SEQRES 7 A 296 HIS THR SER SER GLU ALA ARG THR ASP LYS ASN PHE TYR SEQRES 8 A 296 LYS TRP THR ILE ASN THR LYS SER PHE VAL GLN LEU ARG SEQRES 9 A 296 ARG LYS LEU GLU LEU PHE THR TYR LEU ARG PHE ASP ALA SEQRES 10 A 296 GLU ILE THR ILE LEU THR THR VAL ALA VAL GLY SER ASN SEQRES 11 A 296 ASN SER THR TYR MET GLY LEU PRO ASP LEU THR LEU GLN SEQRES 12 A 296 ALA MET PHE VAL PRO THR GLY ALA LEU THR PRO GLU LYS SEQRES 13 A 296 GLN ASP SER PHE HIS TRP GLN SER GLY SER ASN ALA SER SEQRES 14 A 296 VAL PHE PHE LYS VAL SER ASP PRO PRO ALA ARG MET THR SEQRES 15 A 296 ILE PRO PHE MET CYS ILE ASN SER ALA TYR SER VAL PHE SEQRES 16 A 296 TYR ASP GLY PHE ALA GLY PHE GLU LYS ASN GLY LEU TYR SEQRES 17 A 296 GLY ILE ASN PRO ALA ASP THR ILE GLY ASN LEU CYS VAL SEQRES 18 A 296 ARG ILE VAL ASN GLU HIS GLN PRO ILE GLY PHE THR VAL SEQRES 19 A 296 THR VAL ARG VAL TYR MET LYS PRO LYS HIS ILE LYS ALA SEQRES 20 A 296 TRP ALA PRO ARG PRO PRO ARG THR LEU PRO TYR MET SER SEQRES 21 A 296 ILE ALA ASN ALA ASN TYR LYS GLY LYS GLU ARG ALA PRO SEQRES 22 A 296 ASN ALA LEU ASN ALA ILE ILE GLY ASN ARG GLU SER VAL SEQRES 23 A 296 LYS THR MET PRO HIS ASP ILE VAL LEU VAL SEQRES 1 B 248 SER PRO SER ALA GLU ALA CYS GLY TYR SER ASP ARG VAL SEQRES 2 B 248 LEU GLN LEU LYS LEU GLY ASN SER ALA ILE VAL THR GLN SEQRES 3 B 248 GLU ALA ALA ASN TYR CYS CYS ALA TYR GLY GLU TRP PRO SEQRES 4 B 248 ASN TYR LEU PRO ASP HIS GLU ALA VAL ALA ILE ASP LYS SEQRES 5 B 248 PRO THR GLN PRO GLU THR ALA THR ASP ARG PHE TYR THR SEQRES 6 B 248 LEU LYS SER VAL LYS TRP GLU THR GLU SER THR GLY TRP SEQRES 7 B 248 TRP TRP LYS LEU PRO ASP ALA LEU ASN ASN ILE GLY MET SEQRES 8 B 248 PHE GLY GLN ASN VAL GLN HIS HIS TYR LEU TYR ARG SER SEQRES 9 B 248 GLY PHE LEU ILE HIS VAL GLN CYS ASN ALA THR LYS PHE SEQRES 10 B 248 HIS GLN GLY ALA LEU LEU VAL VAL ALA ILE PRO GLU HIS SEQRES 11 B 248 GLN ARG GLY ALA HIS ASN THR THR THR SER PRO GLY PHE SEQRES 12 B 248 ASP ASP ILE MET LYS GLY GLU GLU GLY GLY THR PHE ASN SEQRES 13 B 248 HIS PRO TYR VAL LEU ASP ASP GLY THR SER LEU ALA CYS SEQRES 14 B 248 ALA THR ILE PHE PRO HIS GLN TRP ILE ASN LEU ARG THR SEQRES 15 B 248 ASN ASN SER ALA THR ILE VAL LEU PRO TRP MET ASN ALA SEQRES 16 B 248 ALA PRO MET ASP PHE PRO LEU ARG HIS ASN GLN TRP THR SEQRES 17 B 248 LEU ALA ILE ILE PRO VAL VAL PRO LEU GLY THR ARG THR SEQRES 18 B 248 VAL SER SER MET VAL PRO ILE THR VAL SER ILE ALA PRO SEQRES 19 B 248 MET CYS CYS GLU PHE ASN GLY LEU ARG HIS ALA ILE THR SEQRES 20 B 248 GLN SEQRES 1 C 247 GLY VAL PRO THR TYR LEU LEU PRO GLY SER GLY GLN PHE SEQRES 2 C 247 LEU THR THR ASP ASP HIS SER SER ALA PRO VAL LEU PRO SEQRES 3 C 247 CYS PHE ASN PRO THR PRO GLU MET HIS ILE PRO GLY GLN SEQRES 4 C 247 VAL ARG ASN MET LEU GLU VAL ILE GLN VAL GLU SER MET SEQRES 5 C 247 MET GLU ILE ASN ASN THR GLU ASN ALA VAL GLY MET GLN SEQRES 6 C 247 ARG LEU LYS VAL ASP ILE SER VAL LEU THR ASP VAL ASP SEQRES 7 C 247 GLN LEU LEU PHE ASN ILE PRO LEU ASP ILE GLN LEU ASP SEQRES 8 C 247 GLY PRO LEU ARG ASN THR LEU VAL GLY ASN ILE SER ARG SEQRES 9 C 247 TYR TYR THR HIS TRP SER GLY SER LEU GLU MET THR PHE SEQRES 10 C 247 MET PHE CYS GLY SER PHE MET ALA THR GLY LYS LEU ILE SEQRES 11 C 247 LEU CYS TYR THR PRO PRO GLY GLY SER CYS PRO THR THR SEQRES 12 C 247 ARG GLU THR ALA MET LEU GLY THR HIS ILE VAL TRP ASP SEQRES 13 C 247 PHE GLY LEU GLN SER SER VAL THR LEU VAL ILE PRO TRP SEQRES 14 C 247 ILE SER GLY SER HIS TYR ARG MET PHE ASN ASN ASP ALA SEQRES 15 C 247 LYS SER THR ASN ALA ASN VAL GLY TYR VAL THR CYS PHE SEQRES 16 C 247 MET GLN THR ASN LEU ILE VAL PRO SER GLU SER SER ASN SEQRES 17 C 247 THR CYS SER LEU ILE GLY PHE VAL ALA ALA LYS ASP ASP SEQRES 18 C 247 PHE SER LEU ARG LEU MET ARG ASP SER PRO ASP ILE GLY SEQRES 19 C 247 GLN LEU GLU HIS LEU HIS GLU ALA GLU ALA ALA TYR GLN SEQRES 1 D 69 MET GLY ALA GLN VAL THR ARG GLN GLN THR GLY THR HIS SEQRES 2 D 69 GLU ASN ALA ASN ILE ALA THR ASN GLY SER HIS ILE THR SEQRES 3 D 69 TYR ASN GLN ILE ASN PHE TYR LYS ASP SER TYR ALA ALA SEQRES 4 D 69 SER ALA SER LYS GLN ASP PHE SER GLN ASP PRO SER LYS SEQRES 5 D 69 PHE THR GLU PRO VAL VAL GLU GLY LEU LYS ALA GLY ALA SEQRES 6 D 69 PRO VAL LEU LYS HELIX 1 AA1 LEU A 58 SER A 64 1 7 HELIX 2 AA2 PHE A 100 GLU A 108 1 9 HELIX 3 AA3 CYS B 33 GLU B 37 5 5 HELIX 4 AA4 PRO B 56 THR B 60 5 5 HELIX 5 AA5 PRO B 83 ASN B 87 5 5 HELIX 6 AA6 ILE B 89 HIS B 98 1 10 HELIX 7 AA7 GLY B 142 MET B 147 1 6 HELIX 8 AA8 HIS B 157 LEU B 161 5 5 HELIX 9 AA9 SER B 166 PHE B 173 5 8 HELIX 10 AB1 MET C 43 GLN C 48 1 6 HELIX 11 AB2 VAL C 62 ARG C 66 5 5 HELIX 12 AB3 THR C 97 ARG C 104 1 8 HELIX 13 AB4 THR C 143 MET C 148 1 6 HELIX 14 AB5 ASP D 35 ALA D 39 5 5 HELIX 15 AB6 ASP D 49 PHE D 53 5 5 SHEET 1 AA1 5 ALA A 67 TYR A 76 0 SHEET 2 AA1 5 PHE A 232 PRO A 250 -1 O VAL A 238 N VAL A 69 SHEET 3 AA1 5 PHE A 110 VAL A 127 -1 N THR A 120 O TYR A 239 SHEET 4 AA1 5 ALA A 179 ILE A 183 -1 O ILE A 183 N ALA A 117 SHEET 5 AA1 5 ALA C 22 PRO C 23 1 O ALA C 22 N THR A 182 SHEET 1 AA2 4 TYR A 192 SER A 193 0 SHEET 2 AA2 4 PHE A 110 VAL A 127 -1 N LEU A 113 O TYR A 192 SHEET 3 AA2 4 PHE A 232 PRO A 250 -1 O TYR A 239 N THR A 120 SHEET 4 AA2 4 GLN C 39 VAL C 40 -1 O VAL C 40 N ALA A 247 SHEET 1 AA3 4 PHE A 90 ILE A 95 0 SHEET 2 AA3 4 GLY A 217 ILE A 223 -1 O VAL A 221 N TYR A 91 SHEET 3 AA3 4 THR A 141 VAL A 147 -1 N VAL A 147 O ASN A 218 SHEET 4 AA3 4 ALA A 168 LYS A 173 -1 O ALA A 168 N PHE A 146 SHEET 1 AA4 2 ARG B 12 LEU B 18 0 SHEET 2 AA4 2 SER B 21 ALA B 28 -1 O ALA B 28 N ARG B 12 SHEET 1 AA5 3 TYR B 64 THR B 65 0 SHEET 2 AA5 3 VAL B 226 LEU B 242 -1 O ILE B 232 N TYR B 64 SHEET 3 AA5 3 VAL B 69 TRP B 71 -1 N VAL B 69 O ILE B 228 SHEET 1 AA6 4 TYR B 64 THR B 65 0 SHEET 2 AA6 4 VAL B 226 LEU B 242 -1 O ILE B 232 N TYR B 64 SHEET 3 AA6 4 HIS B 99 GLN B 111 -1 N GLN B 111 O THR B 229 SHEET 4 AA6 4 SER B 185 LEU B 190 -1 O ILE B 188 N ILE B 108 SHEET 1 AA7 5 GLY B 153 THR B 154 0 SHEET 2 AA7 5 TRP B 78 LEU B 82 -1 N TRP B 79 O GLY B 153 SHEET 3 AA7 5 TRP B 207 GLY B 218 -1 O LEU B 209 N TRP B 80 SHEET 4 AA7 5 GLN B 119 ALA B 126 -1 N LEU B 123 O ILE B 212 SHEET 5 AA7 5 HIS B 175 TRP B 177 -1 O GLN B 176 N VAL B 124 SHEET 1 AA8 4 VAL C 69 ILE C 71 0 SHEET 2 AA8 4 CYS C 210 ALA C 218 -1 O LEU C 212 N VAL C 69 SHEET 3 AA8 4 LEU C 113 CYS C 120 -1 N MET C 118 O ILE C 213 SHEET 4 AA8 4 SER C 162 ILE C 167 -1 O ILE C 167 N LEU C 113 SHEET 1 AA9 4 LEU C 80 PRO C 85 0 SHEET 2 AA9 4 TYR C 191 MET C 196 -1 O CYS C 194 N PHE C 82 SHEET 3 AA9 4 LYS C 128 THR C 134 -1 N CYS C 132 O THR C 193 SHEET 4 AA9 4 THR C 151 ASP C 156 -1 O THR C 151 N TYR C 133 SHEET 1 AB1 2 TYR C 106 SER C 110 0 SHEET 2 AB1 2 SER C 223 MET C 227 -1 O ARG C 225 N HIS C 108 CISPEP 1 ALA A 272 PRO A 273 0 7.71 CISPEP 2 LEU B 82 PRO B 83 0 11.66 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 TER 2305 VAL A 295 TER 4167 ILE B 246 TER 6075 GLN C 247 TER 6324 VAL D 58 MASTER 393 0 0 15 37 0 0 6 6320 4 0 68 END