HEADER OXYGEN BINDING 15-JUL-24 9CMF TITLE SUBSTRATE BOUND DOSP COMPND MOL_ID: 1; COMPND 2 MOLECULE: OXYGEN SENSOR PROTEIN DOSP; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: DIRECT OXYGEN-SENSING PHOSPHODIESTERASE,DIRECT OXYGEN SENSOR COMPND 5 PROTEIN,EC DOS,HEME-REGULATED CYCLIC DI-GMP PHOSPHODIESTERASE; COMPND 6 EC: 3.1.4.52; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 3 ORGANISM_TAXID: 562; SOURCE 4 GENE: DOSP, DOS, PDEO, YDDU, B1489, JW1484; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS HEME, DOSP, PHOSPHODIESTERASE, C-DI-GMP, OXYGEN BINDING EXPDTA ELECTRON MICROSCOPY AUTHOR P.KUMAR,D.L.KOBER REVDAT 2 27-NOV-24 9CMF 1 JRNL REVDAT 1 20-NOV-24 9CMF 0 JRNL AUTH W.WU,P.KUMAR,C.A.BRAUTIGAM,S.C.TSO,H.R.BANIASADI,D.L.KOBER, JRNL AUTH 2 M.A.GILLES-GONZALEZ JRNL TITL STRUCTURES OF THE MULTI-DOMAIN OXYGEN SENSOR DOSP: REMOTE JRNL TITL 2 CONTROL OF A C-DI-GMP PHOSPHODIESTERASE BY A REGULATORY PAS JRNL TITL 3 DOMAIN. JRNL REF NAT COMMUN V. 15 9653 2024 JRNL REFN ESSN 2041-1723 JRNL PMID 39511182 JRNL DOI 10.1038/S41467-024-53942-7 REMARK 2 REMARK 2 RESOLUTION. 3.11 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 SOFTWARE PACKAGES : CRYOSPARC, CRYOSPARC REMARK 3 RECONSTRUCTION SCHEMA : NULL REMARK 3 REMARK 3 EM MAP-MODEL FITTING AND REFINEMENT REMARK 3 PDB ENTRY : NULL REMARK 3 REFINEMENT SPACE : NULL REMARK 3 REFINEMENT PROTOCOL : NULL REMARK 3 REFINEMENT TARGET : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE : NULL REMARK 3 REMARK 3 FITTING PROCEDURE : NULL REMARK 3 REMARK 3 EM IMAGE RECONSTRUCTION STATISTICS REMARK 3 NOMINAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 ACTUAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 EFFECTIVE RESOLUTION (ANGSTROMS) : 3.110 REMARK 3 NUMBER OF PARTICLES : 307809 REMARK 3 CTF CORRECTION METHOD : PHASE FLIPPING AND AMPLITUDE REMARK 3 CORRECTION REMARK 3 REMARK 3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: NULL REMARK 3 REMARK 3 OTHER DETAILS: THIS IS A COMPOSITE MAP CREATED BY COMBINING MAPS REMARK 3 GENERATED SEPARATELY FOR EACH HALF OF THE PROTEIN. THE PARTICLE REMARK 3 COUNT AND RESOLUTION PROVIDED REFER TO THE BEST MAP OBTAINED. REMARK 4 REMARK 4 9CMF COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 16-JUL-24. REMARK 100 THE DEPOSITION ID IS D_1000285873. REMARK 245 REMARK 245 EXPERIMENTAL DETAILS REMARK 245 RECONSTRUCTION METHOD : SINGLE PARTICLE REMARK 245 SPECIMEN TYPE : NULL REMARK 245 REMARK 245 ELECTRON MICROSCOPE SAMPLE REMARK 245 SAMPLE TYPE : PARTICLE REMARK 245 PARTICLE TYPE : POINT REMARK 245 NAME OF SAMPLE : DIMER OF DOSP REMARK 245 SAMPLE CONCENTRATION (MG ML-1) : NULL REMARK 245 SAMPLE SUPPORT DETAILS : NULL REMARK 245 SAMPLE VITRIFICATION DETAILS : NULL REMARK 245 SAMPLE BUFFER : NULL REMARK 245 PH : 7.50 REMARK 245 SAMPLE DETAILS : NULL REMARK 245 REMARK 245 DATA ACQUISITION REMARK 245 DATE OF EXPERIMENT : NULL REMARK 245 NUMBER OF MICROGRAPHS-IMAGES : NULL REMARK 245 TEMPERATURE (KELVIN) : NULL REMARK 245 MICROSCOPE MODEL : TFS KRIOS REMARK 245 DETECTOR TYPE : GATAN K3 BIOQUANTUM (6K X REMARK 245 4K) REMARK 245 MINIMUM DEFOCUS (NM) : 800.00 REMARK 245 MAXIMUM DEFOCUS (NM) : 2000.00 REMARK 245 MINIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 MAXIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 NOMINAL CS : NULL REMARK 245 IMAGING MODE : BRIGHT FIELD REMARK 245 ELECTRON DOSE (ELECTRONS NM**-2) : 5000.00 REMARK 245 ILLUMINATION MODE : FLOOD BEAM REMARK 245 NOMINAL MAGNIFICATION : NULL REMARK 245 CALIBRATED MAGNIFICATION : NULL REMARK 245 SOURCE : FIELD EMISSION GUN REMARK 245 ACCELERATION VOLTAGE (KV) : 300 REMARK 245 IMAGING DETAILS : NULL REMARK 247 REMARK 247 ELECTRON MICROSCOPY REMARK 247 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON REMARK 247 MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE REMARK 247 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES REMARK 247 ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION REMARK 247 OF THE STRUCTURE FACTORS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 HIS A 152 -51.96 -124.45 REMARK 500 ASP A 154 53.50 -93.07 REMARK 500 PHE A 198 60.82 36.72 REMARK 500 ALA A 200 31.27 -140.47 REMARK 500 MET A 389 77.93 60.87 REMARK 500 THR A 390 4.56 89.04 REMARK 500 ASN A 394 -169.75 -123.19 REMARK 500 ILE A 458 -61.95 -99.16 REMARK 500 THR A 461 35.47 -99.40 REMARK 500 SER A 539 77.26 59.04 REMARK 500 GLN A 564 41.51 -109.04 REMARK 500 ILE A 637 76.89 43.11 REMARK 500 ASN A 652 51.47 -91.12 REMARK 500 ASN A 756 63.33 62.31 REMARK 500 ASN B 37 -169.06 -118.84 REMARK 500 ALA B 149 -9.44 75.09 REMARK 500 ARG B 164 63.50 60.68 REMARK 500 LEU B 193 54.16 -94.03 REMARK 500 ASP B 241 -168.98 -126.07 REMARK 500 ARG B 334 14.03 53.81 REMARK 500 PHE B 386 -169.46 -129.76 REMARK 500 THR B 390 -4.76 68.05 REMARK 500 GLU B 447 1.39 -68.42 REMARK 500 GLU B 459 149.11 -171.19 REMARK 500 THR B 461 51.09 -92.90 REMARK 500 ASN B 563 72.03 31.70 REMARK 500 GLU B 576 -60.57 -95.23 REMARK 500 ILE B 637 77.03 42.93 REMARK 500 PHE B 707 -130.21 58.97 REMARK 500 ASN B 756 65.54 60.40 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 904 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN A 643 OD1 REMARK 620 2 C2E A 903 O2P 102.0 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 904 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU B 584 OE2 REMARK 620 2 ASN B 643 OD1 92.6 REMARK 620 3 C2E B 903 O2P 102.7 74.5 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 905 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 705 OD2 REMARK 620 2 GLU B 762 OE1 130.4 REMARK 620 3 C2E B 903 O1P 125.7 95.7 REMARK 620 N 1 2 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EMD-45665 RELATED DB: EMDB REMARK 900 RELATED ID: EMD-45645 RELATED DB: EMDB REMARK 900 C-TERMINAL MAP REMARK 900 RELATED ID: EMD-45646 RELATED DB: EMDB REMARK 900 N-TERMINAL MAP REMARK 900 RELATED ID: EMD-45746 RELATED DB: EMDB REMARK 900 SUBSTRATE BOUND DOSP DBREF 9CMF A 20 807 UNP P76129 DOSP_ECOLI 12 799 DBREF 9CMF B 20 807 UNP P76129 DOSP_ECOLI 12 799 SEQADV 9CMF THR A 195 UNP P76129 ILE 187 CONFLICT SEQADV 9CMF THR B 195 UNP P76129 ILE 187 CONFLICT SEQRES 1 A 788 GLY ILE PHE PHE PRO ALA LEU GLU GLN ASN MET MET GLY SEQRES 2 A 788 ALA VAL LEU ILE ASN GLU ASN ASP GLU VAL MET PHE PHE SEQRES 3 A 788 ASN PRO ALA ALA GLU LYS LEU TRP GLY TYR LYS ARG GLU SEQRES 4 A 788 GLU VAL ILE GLY ASN ASN ILE ASP MET LEU ILE PRO ARG SEQRES 5 A 788 ASP LEU ARG PRO ALA HIS PRO GLU TYR ILE ARG HIS ASN SEQRES 6 A 788 ARG GLU GLY GLY LYS ALA ARG VAL GLU GLY MET SER ARG SEQRES 7 A 788 GLU LEU GLN LEU GLU LYS LYS ASP GLY SER LYS ILE TRP SEQRES 8 A 788 THR ARG PHE ALA LEU SER LYS VAL SER ALA GLU GLY LYS SEQRES 9 A 788 VAL TYR TYR LEU ALA LEU VAL ARG ASP ALA SER VAL GLU SEQRES 10 A 788 MET ALA GLN LYS GLU GLN THR ARG GLN LEU ILE ILE ALA SEQRES 11 A 788 VAL ASP HIS LEU ASP ARG PRO VAL ILE VAL LEU ASP PRO SEQRES 12 A 788 GLU ARG HIS ILE VAL GLN CYS ASN ARG ALA PHE THR GLU SEQRES 13 A 788 MET PHE GLY TYR CYS ILE SER GLU ALA SER GLY MET GLN SEQRES 14 A 788 PRO ASP THR LEU LEU ASN THR PRO GLU PHE PRO ALA ASP SEQRES 15 A 788 ASN ARG ILE ARG LEU GLN GLN LEU LEU TRP LYS THR ALA SEQRES 16 A 788 ARG ASP GLN ASP GLU PHE LEU LEU LEU THR ARG THR GLY SEQRES 17 A 788 GLU LYS ILE TRP ILE LYS ALA SER ILE SER PRO VAL TYR SEQRES 18 A 788 ASP VAL LEU ALA HIS LEU GLN ASN LEU VAL MET THR PHE SEQRES 19 A 788 SER ASP ILE THR GLU GLU ARG GLN ILE ARG GLN LEU GLU SEQRES 20 A 788 GLY ASN ILE LEU ALA ALA MET CYS SER SER PRO PRO PHE SEQRES 21 A 788 HIS GLU MET GLY GLU ILE ILE CYS ARG ASN ILE GLU SER SEQRES 22 A 788 VAL LEU ASN GLU SER HIS VAL SER LEU PHE ALA LEU ARG SEQRES 23 A 788 ASN GLY MET PRO ILE HIS TRP ALA SER SER SER HIS GLY SEQRES 24 A 788 ALA GLU ILE GLN ASN ALA GLN SER TRP SER ALA THR ILE SEQRES 25 A 788 ARG GLN ARG ASP GLY ALA PRO ALA GLY ILE LEU GLN ILE SEQRES 26 A 788 LYS THR SER SER GLY ALA GLU THR SER ALA PHE ILE GLU SEQRES 27 A 788 ARG VAL ALA ASP ILE SER GLN HIS MET ALA ALA LEU ALA SEQRES 28 A 788 LEU GLU GLN GLU LYS SER ARG GLN HIS ILE GLU GLN LEU SEQRES 29 A 788 ILE GLN PHE ASP PRO MET THR GLY LEU PRO ASN ARG ASN SEQRES 30 A 788 ASN LEU HIS ASN TYR LEU ASP ASP LEU VAL ASP LYS ALA SEQRES 31 A 788 VAL SER PRO VAL VAL TYR LEU ILE GLY VAL ASP HIS ILE SEQRES 32 A 788 GLN ASP VAL ILE ASP SER LEU GLY TYR ALA TRP ALA ASP SEQRES 33 A 788 GLN ALA LEU LEU GLU VAL VAL ASN ARG PHE ARG GLU LYS SEQRES 34 A 788 LEU LYS PRO ASP GLN TYR LEU CYS ARG ILE GLU GLY THR SEQRES 35 A 788 GLN PHE VAL LEU VAL SER LEU GLU ASN ASP VAL SER ASN SEQRES 36 A 788 ILE THR GLN ILE ALA ASP GLU LEU ARG ASN VAL VAL SER SEQRES 37 A 788 LYS PRO ILE MET ILE ASP ASP LYS PRO PHE PRO LEU THR SEQRES 38 A 788 LEU SER ILE GLY ILE SER TYR ASP LEU GLY LYS ASN ARG SEQRES 39 A 788 ASP TYR LEU LEU SER THR ALA HIS ASN ALA MET ASP TYR SEQRES 40 A 788 ILE ARG LYS ASN GLY GLY ASN GLY TRP GLN PHE PHE SER SEQRES 41 A 788 PRO ALA MET ASN GLU MET VAL LYS GLU ARG LEU VAL LEU SEQRES 42 A 788 GLY ALA ALA LEU LYS GLU ALA ILE SER ASN ASN GLN LEU SEQRES 43 A 788 LYS LEU VAL TYR GLN PRO GLN ILE PHE ALA GLU THR GLY SEQRES 44 A 788 GLU LEU TYR GLY ILE GLU ALA LEU ALA ARG TRP HIS ASP SEQRES 45 A 788 PRO LEU HIS GLY HIS VAL PRO PRO SER ARG PHE ILE PRO SEQRES 46 A 788 LEU ALA GLU GLU ILE GLY GLU ILE GLU ASN ILE GLY ARG SEQRES 47 A 788 TRP VAL ILE ALA GLU ALA CYS ARG GLN LEU ALA GLU TRP SEQRES 48 A 788 ARG SER GLN ASN ILE HIS ILE PRO ALA LEU SER VAL ASN SEQRES 49 A 788 LEU SER ALA LEU HIS PHE ARG SER ASN GLN LEU PRO ASN SEQRES 50 A 788 GLN VAL SER ASP ALA MET HIS ALA TRP GLY ILE ASP GLY SEQRES 51 A 788 HIS GLN LEU THR VAL GLU ILE THR GLU SER MET MET MET SEQRES 52 A 788 GLU HIS ASP THR GLU ILE PHE LYS ARG ILE GLN ILE LEU SEQRES 53 A 788 ARG ASP MET GLY VAL GLY LEU SER VAL ASP ASP PHE GLY SEQRES 54 A 788 THR GLY PHE SER GLY LEU SER ARG LEU VAL SER LEU PRO SEQRES 55 A 788 VAL THR GLU ILE LYS ILE ASP LYS SER PHE VAL ASP ARG SEQRES 56 A 788 CYS LEU THR GLU LYS ARG ILE LEU ALA LEU LEU GLU ALA SEQRES 57 A 788 ILE THR SER ILE GLY GLN SER LEU ASN LEU THR VAL VAL SEQRES 58 A 788 ALA GLU GLY VAL GLU THR LYS GLU GLN PHE GLU MET LEU SEQRES 59 A 788 ARG LYS ILE HIS CYS ARG VAL ILE GLN GLY TYR PHE PHE SEQRES 60 A 788 SER ARG PRO LEU PRO ALA GLU GLU ILE PRO GLY TRP MET SEQRES 61 A 788 SER SER VAL LEU PRO LEU LYS ILE SEQRES 1 B 788 GLY ILE PHE PHE PRO ALA LEU GLU GLN ASN MET MET GLY SEQRES 2 B 788 ALA VAL LEU ILE ASN GLU ASN ASP GLU VAL MET PHE PHE SEQRES 3 B 788 ASN PRO ALA ALA GLU LYS LEU TRP GLY TYR LYS ARG GLU SEQRES 4 B 788 GLU VAL ILE GLY ASN ASN ILE ASP MET LEU ILE PRO ARG SEQRES 5 B 788 ASP LEU ARG PRO ALA HIS PRO GLU TYR ILE ARG HIS ASN SEQRES 6 B 788 ARG GLU GLY GLY LYS ALA ARG VAL GLU GLY MET SER ARG SEQRES 7 B 788 GLU LEU GLN LEU GLU LYS LYS ASP GLY SER LYS ILE TRP SEQRES 8 B 788 THR ARG PHE ALA LEU SER LYS VAL SER ALA GLU GLY LYS SEQRES 9 B 788 VAL TYR TYR LEU ALA LEU VAL ARG ASP ALA SER VAL GLU SEQRES 10 B 788 MET ALA GLN LYS GLU GLN THR ARG GLN LEU ILE ILE ALA SEQRES 11 B 788 VAL ASP HIS LEU ASP ARG PRO VAL ILE VAL LEU ASP PRO SEQRES 12 B 788 GLU ARG HIS ILE VAL GLN CYS ASN ARG ALA PHE THR GLU SEQRES 13 B 788 MET PHE GLY TYR CYS ILE SER GLU ALA SER GLY MET GLN SEQRES 14 B 788 PRO ASP THR LEU LEU ASN THR PRO GLU PHE PRO ALA ASP SEQRES 15 B 788 ASN ARG ILE ARG LEU GLN GLN LEU LEU TRP LYS THR ALA SEQRES 16 B 788 ARG ASP GLN ASP GLU PHE LEU LEU LEU THR ARG THR GLY SEQRES 17 B 788 GLU LYS ILE TRP ILE LYS ALA SER ILE SER PRO VAL TYR SEQRES 18 B 788 ASP VAL LEU ALA HIS LEU GLN ASN LEU VAL MET THR PHE SEQRES 19 B 788 SER ASP ILE THR GLU GLU ARG GLN ILE ARG GLN LEU GLU SEQRES 20 B 788 GLY ASN ILE LEU ALA ALA MET CYS SER SER PRO PRO PHE SEQRES 21 B 788 HIS GLU MET GLY GLU ILE ILE CYS ARG ASN ILE GLU SER SEQRES 22 B 788 VAL LEU ASN GLU SER HIS VAL SER LEU PHE ALA LEU ARG SEQRES 23 B 788 ASN GLY MET PRO ILE HIS TRP ALA SER SER SER HIS GLY SEQRES 24 B 788 ALA GLU ILE GLN ASN ALA GLN SER TRP SER ALA THR ILE SEQRES 25 B 788 ARG GLN ARG ASP GLY ALA PRO ALA GLY ILE LEU GLN ILE SEQRES 26 B 788 LYS THR SER SER GLY ALA GLU THR SER ALA PHE ILE GLU SEQRES 27 B 788 ARG VAL ALA ASP ILE SER GLN HIS MET ALA ALA LEU ALA SEQRES 28 B 788 LEU GLU GLN GLU LYS SER ARG GLN HIS ILE GLU GLN LEU SEQRES 29 B 788 ILE GLN PHE ASP PRO MET THR GLY LEU PRO ASN ARG ASN SEQRES 30 B 788 ASN LEU HIS ASN TYR LEU ASP ASP LEU VAL ASP LYS ALA SEQRES 31 B 788 VAL SER PRO VAL VAL TYR LEU ILE GLY VAL ASP HIS ILE SEQRES 32 B 788 GLN ASP VAL ILE ASP SER LEU GLY TYR ALA TRP ALA ASP SEQRES 33 B 788 GLN ALA LEU LEU GLU VAL VAL ASN ARG PHE ARG GLU LYS SEQRES 34 B 788 LEU LYS PRO ASP GLN TYR LEU CYS ARG ILE GLU GLY THR SEQRES 35 B 788 GLN PHE VAL LEU VAL SER LEU GLU ASN ASP VAL SER ASN SEQRES 36 B 788 ILE THR GLN ILE ALA ASP GLU LEU ARG ASN VAL VAL SER SEQRES 37 B 788 LYS PRO ILE MET ILE ASP ASP LYS PRO PHE PRO LEU THR SEQRES 38 B 788 LEU SER ILE GLY ILE SER TYR ASP LEU GLY LYS ASN ARG SEQRES 39 B 788 ASP TYR LEU LEU SER THR ALA HIS ASN ALA MET ASP TYR SEQRES 40 B 788 ILE ARG LYS ASN GLY GLY ASN GLY TRP GLN PHE PHE SER SEQRES 41 B 788 PRO ALA MET ASN GLU MET VAL LYS GLU ARG LEU VAL LEU SEQRES 42 B 788 GLY ALA ALA LEU LYS GLU ALA ILE SER ASN ASN GLN LEU SEQRES 43 B 788 LYS LEU VAL TYR GLN PRO GLN ILE PHE ALA GLU THR GLY SEQRES 44 B 788 GLU LEU TYR GLY ILE GLU ALA LEU ALA ARG TRP HIS ASP SEQRES 45 B 788 PRO LEU HIS GLY HIS VAL PRO PRO SER ARG PHE ILE PRO SEQRES 46 B 788 LEU ALA GLU GLU ILE GLY GLU ILE GLU ASN ILE GLY ARG SEQRES 47 B 788 TRP VAL ILE ALA GLU ALA CYS ARG GLN LEU ALA GLU TRP SEQRES 48 B 788 ARG SER GLN ASN ILE HIS ILE PRO ALA LEU SER VAL ASN SEQRES 49 B 788 LEU SER ALA LEU HIS PHE ARG SER ASN GLN LEU PRO ASN SEQRES 50 B 788 GLN VAL SER ASP ALA MET HIS ALA TRP GLY ILE ASP GLY SEQRES 51 B 788 HIS GLN LEU THR VAL GLU ILE THR GLU SER MET MET MET SEQRES 52 B 788 GLU HIS ASP THR GLU ILE PHE LYS ARG ILE GLN ILE LEU SEQRES 53 B 788 ARG ASP MET GLY VAL GLY LEU SER VAL ASP ASP PHE GLY SEQRES 54 B 788 THR GLY PHE SER GLY LEU SER ARG LEU VAL SER LEU PRO SEQRES 55 B 788 VAL THR GLU ILE LYS ILE ASP LYS SER PHE VAL ASP ARG SEQRES 56 B 788 CYS LEU THR GLU LYS ARG ILE LEU ALA LEU LEU GLU ALA SEQRES 57 B 788 ILE THR SER ILE GLY GLN SER LEU ASN LEU THR VAL VAL SEQRES 58 B 788 ALA GLU GLY VAL GLU THR LYS GLU GLN PHE GLU MET LEU SEQRES 59 B 788 ARG LYS ILE HIS CYS ARG VAL ILE GLN GLY TYR PHE PHE SEQRES 60 B 788 SER ARG PRO LEU PRO ALA GLU GLU ILE PRO GLY TRP MET SEQRES 61 B 788 SER SER VAL LEU PRO LEU LYS ILE HET HEM A 901 43 HET OXY A 902 2 HET C2E A 903 46 HET MG A 904 1 HET MG A 905 1 HET HEM B 901 43 HET OXY B 902 2 HET C2E B 903 46 HET MG B 904 1 HET MG B 905 1 HETNAM HEM PROTOPORPHYRIN IX CONTAINING FE HETNAM OXY OXYGEN MOLECULE HETNAM C2E 9,9'-[(2R,3R,3AS,5S,7AR,9R,10R,10AS,12S,14AR)-3,5,10, HETNAM 2 C2E 12-TETRAHYDROXY-5,12-DIOXIDOOCTAHYDRO-2H,7H-DIFURO[3, HETNAM 3 C2E 2-D:3',2'-J][1,3,7,9,2, HETNAM 4 C2E 8]TETRAOXADIPHOSPHACYCLODODECINE-2,9-DIYL]BIS(2-AMINO- HETNAM 5 C2E 1,9-DIHYDRO-6H-PURIN-6-ONE) HETNAM MG MAGNESIUM ION HETSYN HEM HEME HETSYN C2E C-DI-GMP; CYCLIC DIGUANOSINE MONOPHOSPHATE FORMUL 3 HEM 2(C34 H32 FE N4 O4) FORMUL 4 OXY 2(O2) FORMUL 5 C2E 2(C20 H24 N10 O14 P2) FORMUL 6 MG 4(MG 2+) HELIX 1 AA1 ILE A 21 ASN A 29 1 9 HELIX 2 AA2 ASN A 46 GLY A 54 1 9 HELIX 3 AA3 LYS A 56 ILE A 61 1 6 HELIX 4 AA4 ASN A 64 ILE A 69 1 6 HELIX 5 AA5 PRO A 75 GLY A 88 1 14 HELIX 6 AA6 ALA A 133 ASP A 151 1 19 HELIX 7 AA7 ASN A 170 GLY A 178 1 9 HELIX 8 AA8 CYS A 180 SER A 185 1 6 HELIX 9 AA9 GLN A 188 LEU A 193 1 6 HELIX 10 AB1 ASP A 201 LYS A 212 1 12 HELIX 11 AB2 ILE A 256 SER A 275 1 20 HELIX 12 AB3 PRO A 278 LEU A 294 1 17 HELIX 13 AB4 THR A 352 GLN A 382 1 31 HELIX 14 AB5 ASN A 394 LYS A 408 1 15 HELIX 15 AB6 HIS A 421 LEU A 429 1 9 HELIX 16 AB7 GLY A 430 LEU A 449 1 20 HELIX 17 AB8 ASP A 471 VAL A 486 1 16 HELIX 18 AB9 ASN A 512 GLY A 531 1 20 HELIX 19 AC1 SER A 539 ASN A 563 1 25 HELIX 20 AC2 PRO A 598 GLY A 610 1 13 HELIX 21 AC3 GLU A 611 GLN A 633 1 23 HELIX 22 AC4 SER A 645 ARG A 650 1 6 HELIX 23 AC5 GLN A 653 ALA A 664 1 12 HELIX 24 AC6 THR A 677 GLU A 683 1 7 HELIX 25 AC7 ASP A 685 GLY A 699 1 15 HELIX 26 AC8 GLY A 710 LEU A 720 1 11 HELIX 27 AC9 ASP A 728 CYS A 735 1 8 HELIX 28 AD1 ILE A 741 LEU A 755 1 15 HELIX 29 AD2 THR A 766 LEU A 773 1 8 HELIX 30 AD3 GLU A 794 VAL A 802 1 9 HELIX 31 AD4 ILE B 21 ASN B 29 1 9 HELIX 32 AD5 ASN B 46 GLY B 54 1 9 HELIX 33 AD6 LYS B 56 ILE B 61 1 6 HELIX 34 AD7 ASN B 64 LEU B 68 5 5 HELIX 35 AD8 ALA B 76 GLY B 87 1 12 HELIX 36 AD9 ALA B 133 ILE B 148 1 16 HELIX 37 AE1 ASN B 170 GLY B 178 1 9 HELIX 38 AE2 CYS B 180 SER B 185 1 6 HELIX 39 AE3 GLN B 188 LEU B 193 1 6 HELIX 40 AE4 ALA B 200 LYS B 212 1 13 HELIX 41 AE5 ILE B 256 SER B 275 1 20 HELIX 42 AE6 PRO B 278 LEU B 294 1 17 HELIX 43 AE7 THR B 352 ILE B 384 1 33 HELIX 44 AE8 ASN B 394 ALA B 409 1 16 HELIX 45 AE9 ILE B 422 LEU B 429 1 8 HELIX 46 AF1 GLY B 430 GLU B 447 1 18 HELIX 47 AF2 ASP B 471 VAL B 485 1 15 HELIX 48 AF3 ASN B 512 GLY B 531 1 20 HELIX 49 AF4 SER B 539 ASN B 562 1 24 HELIX 50 AF5 PRO B 598 GLY B 610 1 13 HELIX 51 AF6 GLU B 611 GLN B 633 1 23 HELIX 52 AF7 SER B 645 ARG B 650 1 6 HELIX 53 AF8 GLN B 653 GLY B 666 1 14 HELIX 54 AF9 THR B 677 GLU B 683 1 7 HELIX 55 AG1 ASP B 685 MET B 698 1 14 HELIX 56 AG2 GLY B 710 SER B 719 1 10 HELIX 57 AG3 ASP B 728 ARG B 734 1 7 HELIX 58 AG4 GLU B 738 ARG B 740 5 3 HELIX 59 AG5 ILE B 741 LEU B 755 1 15 HELIX 60 AG6 THR B 766 LEU B 773 1 8 HELIX 61 AG7 GLU B 794 VAL B 802 1 9 SHEET 1 AA1 5 VAL A 42 PHE A 44 0 SHEET 2 AA1 5 GLY A 32 ILE A 36 -1 N LEU A 35 O MET A 43 SHEET 3 AA1 5 TYR A 125 ASP A 132 -1 O TYR A 126 N ILE A 36 SHEET 4 AA1 5 LYS A 108 VAL A 118 -1 N VAL A 118 O TYR A 125 SHEET 5 AA1 5 ARG A 97 GLU A 102 -1 N LEU A 99 O THR A 111 SHEET 1 AA2 5 ILE A 166 GLN A 168 0 SHEET 2 AA2 5 VAL A 157 LEU A 160 -1 N VAL A 159 O VAL A 167 SHEET 3 AA2 5 LEU A 246 ASP A 255 -1 O MET A 251 N ILE A 158 SHEET 4 AA2 5 ILE A 230 TYR A 240 -1 N LYS A 233 O SER A 254 SHEET 5 AA2 5 ASP A 216 LEU A 222 -1 N LEU A 222 O ILE A 230 SHEET 1 AA3 4 MET A 308 SER A 315 0 SHEET 2 AA3 4 SER A 297 ARG A 305 -1 N ARG A 305 O MET A 308 SHEET 3 AA3 4 PRO A 338 THR A 346 -1 O LYS A 345 N HIS A 298 SHEET 4 AA3 4 GLN A 325 ARG A 332 -1 N ILE A 331 O GLY A 340 SHEET 1 AA4 5 TYR A 454 GLU A 459 0 SHEET 2 AA4 5 GLN A 462 SER A 467 -1 O VAL A 464 N CYS A 456 SHEET 3 AA4 5 VAL A 413 ASP A 420 -1 N ILE A 417 O PHE A 463 SHEET 4 AA4 5 THR A 500 SER A 506 -1 O SER A 506 N VAL A 414 SHEET 5 AA4 5 GLY A 534 PHE A 537 1 O GLY A 534 N ILE A 503 SHEET 1 AA5 2 ILE A 490 ILE A 492 0 SHEET 2 AA5 2 LYS A 495 PHE A 497 -1 O LYS A 495 N ILE A 492 SHEET 1 AA610 LEU A 790 PRO A 791 0 SHEET 2 AA610 LYS A 566 PHE A 574 -1 N TYR A 569 O LEU A 790 SHEET 3 AA610 VAL A 780 GLN A 782 -1 O ILE A 781 N ILE A 573 SHEET 4 AA610 THR A 758 GLU A 762 1 N ALA A 761 O GLN A 782 SHEET 5 AA610 GLU A 724 ILE A 727 1 N ILE A 727 O VAL A 760 SHEET 6 AA610 GLY A 701 VAL A 704 1 N VAL A 704 O LYS A 726 SHEET 7 AA610 LEU A 672 ILE A 676 1 N ILE A 676 O SER A 703 SHEET 8 AA610 LEU A 640 ASN A 643 1 N VAL A 642 O GLU A 675 SHEET 9 AA610 LEU A 580 ARG A 588 1 N ILE A 583 O SER A 641 SHEET 10 AA610 LYS A 566 PHE A 574 -1 N LYS A 566 O ARG A 588 SHEET 1 AA7 2 HIS A 590 ASP A 591 0 SHEET 2 AA7 2 GLY A 595 HIS A 596 -1 O GLY A 595 N ASP A 591 SHEET 1 AA8 4 GLY B 32 ILE B 36 0 SHEET 2 AA8 4 LYS B 123 VAL B 130 -1 O ALA B 128 N VAL B 34 SHEET 3 AA8 4 LYS B 108 ALA B 120 -1 N VAL B 118 O TYR B 125 SHEET 4 AA8 4 SER B 96 GLU B 102 -1 N ARG B 97 O PHE B 113 SHEET 1 AA9 5 ILE B 166 CYS B 169 0 SHEET 2 AA9 5 VAL B 157 LEU B 160 -1 N VAL B 159 O VAL B 167 SHEET 3 AA9 5 LEU B 246 ASP B 255 -1 O LEU B 249 N LEU B 160 SHEET 4 AA9 5 ILE B 232 TYR B 240 -1 N SER B 237 O VAL B 250 SHEET 5 AA9 5 ASP B 216 PHE B 220 -1 N ASP B 216 O ILE B 236 SHEET 1 AB1 4 MET B 308 SER B 314 0 SHEET 2 AB1 4 SER B 297 ARG B 305 -1 N ARG B 305 O MET B 308 SHEET 3 AB1 4 PRO B 338 SER B 347 -1 O LYS B 345 N HIS B 298 SHEET 4 AB1 4 ALA B 324 ARG B 332 -1 N ILE B 331 O ALA B 339 SHEET 1 AB2 5 TYR B 454 GLU B 459 0 SHEET 2 AB2 5 GLN B 462 SER B 467 -1 O VAL B 464 N CYS B 456 SHEET 3 AB2 5 VAL B 413 ASP B 420 -1 N TYR B 415 O LEU B 465 SHEET 4 AB2 5 THR B 500 SER B 506 -1 O SER B 506 N VAL B 414 SHEET 5 AB2 5 GLY B 534 PHE B 537 1 O GLN B 536 N ILE B 505 SHEET 1 AB3 4 GLY B 595 VAL B 597 0 SHEET 2 AB3 4 LEU B 580 ASP B 591 -1 N ASP B 591 O GLY B 595 SHEET 3 AB3 4 LYS B 566 PHE B 574 -1 N GLN B 572 O GLY B 582 SHEET 4 AB3 4 LEU B 790 PRO B 791 -1 O LEU B 790 N TYR B 569 SHEET 1 AB410 GLY B 595 VAL B 597 0 SHEET 2 AB410 LEU B 580 ASP B 591 -1 N ASP B 591 O GLY B 595 SHEET 3 AB410 LEU B 640 ASN B 643 1 O SER B 641 N ALA B 585 SHEET 4 AB410 LEU B 672 ILE B 676 1 O THR B 673 N VAL B 642 SHEET 5 AB410 GLY B 701 ASP B 705 1 O SER B 703 N ILE B 676 SHEET 6 AB410 GLU B 724 ILE B 727 1 O LYS B 726 N VAL B 704 SHEET 7 AB410 THR B 758 GLU B 762 1 O VAL B 760 N ILE B 725 SHEET 8 AB410 VAL B 780 GLN B 782 1 O GLN B 782 N ALA B 761 SHEET 9 AB410 LYS B 566 PHE B 574 -1 N ILE B 573 O ILE B 781 SHEET 10 AB410 LEU B 790 PRO B 791 -1 O LEU B 790 N TYR B 569 LINK OD1 ASN A 643 MG MG A 904 1555 1555 2.04 LINK OD2 ASP A 705 MG MG A 905 1555 1555 2.05 LINK O2P C2E A 903 MG MG A 904 1555 1555 1.90 LINK OE2 GLU B 584 MG MG B 904 1555 1555 2.44 LINK OD1 ASN B 643 MG MG B 904 1555 1555 2.80 LINK OD2 ASP B 705 MG MG B 905 1555 1555 2.00 LINK OE1 GLU B 762 MG MG B 905 1555 1555 2.01 LINK O2P C2E B 903 MG MG B 904 1555 1555 1.93 LINK O1P C2E B 903 MG MG B 905 1555 1555 2.62 CISPEP 1 LEU A 803 PRO A 804 0 1.09 CISPEP 2 PHE B 198 PRO B 199 0 -2.31 CISPEP 3 LEU B 803 PRO B 804 0 -7.10 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 CONECT 497212624 CONECT 546412625 CONECT1076412717 CONECT1123812717 CONECT1173012718 CONECT1216112718 CONECT125331253712564 CONECT125341254012547 CONECT125351255012554 CONECT125361255712561 CONECT12537125331253812571 CONECT12538125371253912542 CONECT12539125381254012541 CONECT12540125341253912571 CONECT1254112539 CONECT125421253812543 CONECT125431254212544 CONECT12544125431254512546 CONECT1254512544 CONECT1254612544 CONECT12547125341254812572 CONECT12548125471254912551 CONECT12549125481255012552 CONECT12550125351254912572 CONECT1255112548 CONECT125521254912553 CONECT1255312552 CONECT12554125351255512573 CONECT12555125541255612558 CONECT12556125551255712559 CONECT12557125361255612573 CONECT1255812555 CONECT125591255612560 CONECT1256012559 CONECT12561125361256212574 CONECT12562125611256312565 CONECT12563125621256412566 CONECT12564125331256312574 CONECT1256512562 CONECT125661256312567 CONECT125671256612568 CONECT12568125671256912570 CONECT1256912568 CONECT1257012568 CONECT12571125371254012575 CONECT12572125471255012575 CONECT12573125541255712575 CONECT12574125611256412575 CONECT1257512571125721257312574 CONECT1257612577 CONECT1257712576 CONECT1257812579125801258112609 CONECT125791257812624 CONECT1258012578 CONECT125811257812582 CONECT125821258112583 CONECT12583125821258412585 CONECT125841258312589 CONECT12585125831258612587 CONECT125861258512601 CONECT12587125851258812589 CONECT1258812587 CONECT12589125841258712590 CONECT12590125891259112600 CONECT125911259012592 CONECT125921259112593 CONECT12593125921259412600 CONECT12594125931259512596 CONECT1259512594 CONECT125961259412597 CONECT12597125961259812599 CONECT1259812597 CONECT125991259712600 CONECT12600125901259312599 CONECT1260112586126021260312604 CONECT1260212601 CONECT1260312601 CONECT126041260112605 CONECT126051260412606 CONECT12606126051260712608 CONECT126071260612612 CONECT12608126061260912610 CONECT126091257812608 CONECT12610126081261112612 CONECT1261112610 CONECT12612126071261012613 CONECT12613126121261412623 CONECT126141261312615 CONECT126151261412616 CONECT12616126151261712623 CONECT12617126161261812619 CONECT1261812617 CONECT126191261712620 CONECT12620126191262112622 CONECT1262112620 CONECT126221262012623 CONECT12623126131261612622 CONECT12624 497212579 CONECT12625 5464 CONECT126261263012657 CONECT126271263312640 CONECT126281264312647 CONECT126291265012654 CONECT12630126261263112664 CONECT12631126301263212635 CONECT12632126311263312634 CONECT12633126271263212664 CONECT1263412632 CONECT126351263112636 CONECT126361263512637 CONECT12637126361263812639 CONECT1263812637 CONECT1263912637 CONECT12640126271264112665 CONECT12641126401264212644 CONECT12642126411264312645 CONECT12643126281264212665 CONECT1264412641 CONECT126451264212646 CONECT1264612645 CONECT12647126281264812666 CONECT12648126471264912651 CONECT12649126481265012652 CONECT12650126291264912666 CONECT1265112648 CONECT126521264912653 CONECT1265312652 CONECT12654126291265512667 CONECT12655126541265612658 CONECT12656126551265712659 CONECT12657126261265612667 CONECT1265812655 CONECT126591265612660 CONECT126601265912661 CONECT12661126601266212663 CONECT1266212661 CONECT1266312661 CONECT12664126301263312668 CONECT12665126401264312668 CONECT12666126471265012668 CONECT12667126541265712668 CONECT1266812664126651266612667 CONECT1266912670 CONECT1267012669 CONECT1267112672126731267412702 CONECT126721267112717 CONECT126731267112718 CONECT126741267112675 CONECT126751267412676 CONECT12676126751267712678 CONECT126771267612682 CONECT12678126761267912680 CONECT126791267812694 CONECT12680126781268112682 CONECT1268112680 CONECT12682126771268012683 CONECT12683126821268412693 CONECT126841268312685 CONECT126851268412686 CONECT12686126851268712693 CONECT12687126861268812689 CONECT1268812687 CONECT126891268712690 CONECT12690126891269112692 CONECT1269112690 CONECT126921269012693 CONECT12693126831268612692 CONECT1269412679126951269612697 CONECT1269512694 CONECT1269612694 CONECT126971269412698 CONECT126981269712699 CONECT12699126981270012701 CONECT127001269912705 CONECT12701126991270212703 CONECT127021267112701 CONECT12703127011270412705 CONECT1270412703 CONECT12705127001270312706 CONECT12706127051270712716 CONECT127071270612708 CONECT127081270712709 CONECT12709127081271012716 CONECT12710127091271112712 CONECT1271112710 CONECT127121271012713 CONECT12713127121271412715 CONECT1271412713 CONECT127151271312716 CONECT12716127061270912715 CONECT12717107641123812672 CONECT12718117301216112673 MASTER 179 0 10 61 65 0 0 612716 2 192 122 END