HEADER LIGASE 08-AUG-24 9D1Z TITLE STRUCTURE OF G75Q UBIQUITIN BOUND TO KLHDC3-ELOB/C COMPND MOL_ID: 1; COMPND 2 MOLECULE: KELCH DOMAIN-CONTAINING PROTEIN 3; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: TESTIS INTRACELLULAR MEDIATOR PROTEIN; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: ELONGIN-B; COMPND 8 CHAIN: B; COMPND 9 SYNONYM: ELOB,ELONGIN 18 KDA SUBUNIT,RNA POLYMERASE II TRANSCRIPTION COMPND 10 FACTOR SIII SUBUNIT B,SIII P18,TRANSCRIPTION ELONGATION FACTOR B COMPND 11 POLYPEPTIDE 2; COMPND 12 ENGINEERED: YES; COMPND 13 MOL_ID: 3; COMPND 14 MOLECULE: ELONGIN-C; COMPND 15 CHAIN: C; COMPND 16 SYNONYM: ELOC,ELONGIN 15 KDA SUBUNIT,RNA POLYMERASE II TRANSCRIPTION COMPND 17 FACTOR SIII SUBUNIT C,SIII P15,TRANSCRIPTION ELONGATION FACTOR B COMPND 18 POLYPEPTIDE 1; COMPND 19 ENGINEERED: YES; COMPND 20 MOL_ID: 4; COMPND 21 MOLECULE: UBIQUITIN; COMPND 22 CHAIN: D; COMPND 23 ENGINEERED: YES; COMPND 24 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: KLHDC3, PEAS; SOURCE 6 EXPRESSION_SYSTEM: TRICHOPLUSIA NI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 7111; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 10 ORGANISM_COMMON: HUMAN; SOURCE 11 ORGANISM_TAXID: 9606; SOURCE 12 GENE: ELOB, TCEB2; SOURCE 13 EXPRESSION_SYSTEM: TRICHOPLUSIA NI; SOURCE 14 EXPRESSION_SYSTEM_TAXID: 7111; SOURCE 15 MOL_ID: 3; SOURCE 16 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 17 ORGANISM_COMMON: HUMAN; SOURCE 18 ORGANISM_TAXID: 9606; SOURCE 19 GENE: ELOC, TCEB1; SOURCE 20 EXPRESSION_SYSTEM: TRICHOPLUSIA; SOURCE 21 EXPRESSION_SYSTEM_TAXID: 7110; SOURCE 22 MOL_ID: 4; SOURCE 23 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 24 ORGANISM_COMMON: HUMAN; SOURCE 25 ORGANISM_TAXID: 9606; SOURCE 26 GENE: UBC; SOURCE 27 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 28 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS KLHDC3, UBIQUITIN, C-DEGRON, CULLIN-RING, E3, LIGASE EXPDTA X-RAY DIFFRACTION AUTHOR B.A.SCHULMAN,D.C.SCOTT REVDAT 1 20-NOV-24 9D1Z 0 JRNL AUTH D.C.SCOTT,S.CHITTORI,N.PURSER,M.T.KING,S.MAIWALD,K.CHUIRON, JRNL AUTH 2 A.NOURSE,C.LEE,J.A.PAULO,D.J.MILLER,S.J.ELLEDGE,J.W.HAPER, JRNL AUTH 3 G.KLEIGER,B.A.SCHULMAN JRNL TITL STRUCTURAL BASIS FOR C-DEGRON SELECTIVITY ACROSS JRNL TITL 2 KLHDCX-FAMILY E3 UBIQUITIN LIGASES JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.88 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.21_5207 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.88 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 45.95 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.5 REMARK 3 NUMBER OF REFLECTIONS : 84718 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.170 REMARK 3 R VALUE (WORKING SET) : 0.169 REMARK 3 FREE R VALUE : 0.190 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.940 REMARK 3 FREE R VALUE TEST SET COUNT : 4189 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 45.9500 - 5.8500 1.00 2911 151 0.1827 0.2197 REMARK 3 2 5.8500 - 4.6400 1.00 2795 139 0.1515 0.1814 REMARK 3 3 4.6400 - 4.0600 1.00 2768 146 0.1266 0.1384 REMARK 3 4 4.0600 - 3.6900 1.00 2777 140 0.1446 0.1433 REMARK 3 5 3.6900 - 3.4200 1.00 2727 153 0.1544 0.1750 REMARK 3 6 3.4200 - 3.2200 1.00 2740 133 0.1588 0.1523 REMARK 3 7 3.2200 - 3.0600 1.00 2722 163 0.1663 0.1840 REMARK 3 8 3.0600 - 2.9300 1.00 2756 139 0.1788 0.1722 REMARK 3 9 2.9300 - 2.8100 1.00 2705 143 0.1797 0.2242 REMARK 3 10 2.8100 - 2.7200 1.00 2718 153 0.1874 0.2201 REMARK 3 11 2.7200 - 2.6300 1.00 2705 147 0.1857 0.2206 REMARK 3 12 2.6300 - 2.5600 1.00 2679 177 0.1870 0.2196 REMARK 3 13 2.5600 - 2.4900 1.00 2705 153 0.1808 0.2108 REMARK 3 14 2.4900 - 2.4300 1.00 2716 129 0.1817 0.2297 REMARK 3 15 2.4300 - 2.3700 1.00 2698 144 0.1836 0.1970 REMARK 3 16 2.3700 - 2.3200 1.00 2696 126 0.1672 0.1996 REMARK 3 17 2.3200 - 2.2800 1.00 2761 129 0.1727 0.1980 REMARK 3 18 2.2800 - 2.2300 1.00 2679 131 0.1702 0.2187 REMARK 3 19 2.2300 - 2.1900 1.00 2701 145 0.1816 0.1964 REMARK 3 20 2.1900 - 2.1600 1.00 2697 135 0.1775 0.2197 REMARK 3 21 2.1600 - 2.1200 1.00 2704 124 0.1817 0.1955 REMARK 3 22 2.1200 - 2.0900 1.00 2726 120 0.1825 0.2035 REMARK 3 23 2.0900 - 2.0600 1.00 2692 139 0.1821 0.2141 REMARK 3 24 2.0600 - 2.0300 1.00 2693 141 0.1843 0.2153 REMARK 3 25 2.0300 - 2.0000 1.00 2679 150 0.1858 0.2090 REMARK 3 26 2.0000 - 1.9800 0.99 2688 147 0.1992 0.2185 REMARK 3 27 1.9800 - 1.9500 0.99 2661 128 0.2111 0.2581 REMARK 3 28 1.9500 - 1.9300 0.99 2699 132 0.2300 0.2417 REMARK 3 29 1.9300 - 1.9000 0.99 2645 150 0.2376 0.2930 REMARK 3 30 1.9000 - 1.8800 0.62 1686 82 0.2766 0.3023 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.180 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 18.960 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 5188 REMARK 3 ANGLE : 0.975 7049 REMARK 3 CHIRALITY : 0.061 775 REMARK 3 PLANARITY : 0.009 909 REMARK 3 DIHEDRAL : 14.615 1880 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 22 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 2 THROUGH 68 ) REMARK 3 ORIGIN FOR THE GROUP (A): -26.9898 -7.2676 -14.0160 REMARK 3 T TENSOR REMARK 3 T11: 0.1919 T22: 0.2556 REMARK 3 T33: 0.2090 T12: -0.0146 REMARK 3 T13: -0.0250 T23: -0.0048 REMARK 3 L TENSOR REMARK 3 L11: 1.6928 L22: 1.4344 REMARK 3 L33: 1.7375 L12: -0.0481 REMARK 3 L13: 0.0785 L23: -0.1093 REMARK 3 S TENSOR REMARK 3 S11: -0.0369 S12: 0.0840 S13: -0.0342 REMARK 3 S21: -0.0649 S22: 0.0401 S23: 0.2598 REMARK 3 S31: -0.0565 S32: -0.4034 S33: -0.0091 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 69 THROUGH 93 ) REMARK 3 ORIGIN FOR THE GROUP (A): -27.5692 5.3027 -16.4485 REMARK 3 T TENSOR REMARK 3 T11: 0.2447 T22: 0.2871 REMARK 3 T33: 0.2596 T12: 0.0628 REMARK 3 T13: -0.0237 T23: 0.0119 REMARK 3 L TENSOR REMARK 3 L11: 1.4586 L22: 2.0154 REMARK 3 L33: 2.1373 L12: 0.1704 REMARK 3 L13: -0.6054 L23: 0.0438 REMARK 3 S TENSOR REMARK 3 S11: -0.0073 S12: 0.1201 S13: 0.1703 REMARK 3 S21: -0.1571 S22: 0.0447 S23: 0.3139 REMARK 3 S31: -0.3613 S32: -0.3414 S33: -0.0084 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 94 THROUGH 124 ) REMARK 3 ORIGIN FOR THE GROUP (A): -29.9026 8.8328 -17.3748 REMARK 3 T TENSOR REMARK 3 T11: 0.2607 T22: 0.3367 REMARK 3 T33: 0.2702 T12: 0.0908 REMARK 3 T13: -0.0434 T23: 0.0099 REMARK 3 L TENSOR REMARK 3 L11: 1.5060 L22: 3.4651 REMARK 3 L33: 1.3345 L12: 0.0671 REMARK 3 L13: -1.0440 L23: 0.2791 REMARK 3 S TENSOR REMARK 3 S11: 0.0554 S12: 0.2050 S13: 0.0983 REMARK 3 S21: -0.3671 S22: -0.0039 S23: 0.3562 REMARK 3 S31: -0.4257 S32: -0.3836 S33: -0.0074 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 125 THROUGH 294 ) REMARK 3 ORIGIN FOR THE GROUP (A): -10.6888 2.9720 -27.6968 REMARK 3 T TENSOR REMARK 3 T11: 0.2932 T22: 0.2481 REMARK 3 T33: 0.2032 T12: -0.0035 REMARK 3 T13: 0.0319 T23: 0.0153 REMARK 3 L TENSOR REMARK 3 L11: 0.9849 L22: 1.4944 REMARK 3 L33: 0.9349 L12: -0.3458 REMARK 3 L13: -0.0217 L23: 0.0259 REMARK 3 S TENSOR REMARK 3 S11: 0.0580 S12: 0.1817 S13: 0.0835 REMARK 3 S21: -0.3301 S22: -0.0403 S23: -0.1267 REMARK 3 S31: -0.1124 S32: -0.0434 S33: -0.0154 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 295 THROUGH 322 ) REMARK 3 ORIGIN FOR THE GROUP (A): -16.9726 -11.3991 -20.1301 REMARK 3 T TENSOR REMARK 3 T11: 0.1914 T22: 0.1850 REMARK 3 T33: 0.2039 T12: -0.0006 REMARK 3 T13: 0.0219 T23: 0.0020 REMARK 3 L TENSOR REMARK 3 L11: 4.5868 L22: 4.3456 REMARK 3 L33: 4.5670 L12: 0.5445 REMARK 3 L13: 1.3566 L23: 0.6589 REMARK 3 S TENSOR REMARK 3 S11: 0.0745 S12: 0.0557 S13: -0.2370 REMARK 3 S21: -0.3845 S22: -0.0745 S23: 0.0661 REMARK 3 S31: 0.0988 S32: -0.2737 S33: 0.1048 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 323 THROUGH 377 ) REMARK 3 ORIGIN FOR THE GROUP (A): -15.4304 -22.0951 -7.1771 REMARK 3 T TENSOR REMARK 3 T11: 0.2258 T22: 0.2188 REMARK 3 T33: 0.2687 T12: -0.0234 REMARK 3 T13: 0.0168 T23: -0.0010 REMARK 3 L TENSOR REMARK 3 L11: 1.8336 L22: 1.4563 REMARK 3 L33: 1.7153 L12: -0.3304 REMARK 3 L13: 1.0688 L23: -0.8042 REMARK 3 S TENSOR REMARK 3 S11: 0.0148 S12: -0.1020 S13: -0.2633 REMARK 3 S21: -0.0285 S22: 0.0387 S23: 0.1118 REMARK 3 S31: 0.1709 S32: -0.1808 S33: -0.0606 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 1 THROUGH 9 ) REMARK 3 ORIGIN FOR THE GROUP (A): 19.0768 -23.4196 -2.5571 REMARK 3 T TENSOR REMARK 3 T11: 0.1652 T22: 0.2936 REMARK 3 T33: 0.3512 T12: 0.0099 REMARK 3 T13: 0.0252 T23: 0.0272 REMARK 3 L TENSOR REMARK 3 L11: 8.0813 L22: 3.9923 REMARK 3 L33: 3.3880 L12: -0.6116 REMARK 3 L13: 2.0690 L23: 2.6546 REMARK 3 S TENSOR REMARK 3 S11: 0.0282 S12: 1.0184 S13: 0.1874 REMARK 3 S21: -0.3690 S22: 0.1568 S23: -0.0920 REMARK 3 S31: -0.2225 S32: 0.3104 S33: -0.0851 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 10 THROUGH 55 ) REMARK 3 ORIGIN FOR THE GROUP (A): 27.3921 -23.5682 1.4846 REMARK 3 T TENSOR REMARK 3 T11: 0.2244 T22: 0.2365 REMARK 3 T33: 0.4139 T12: 0.0301 REMARK 3 T13: -0.0130 T23: 0.0329 REMARK 3 L TENSOR REMARK 3 L11: 4.8442 L22: 1.6821 REMARK 3 L33: 3.2735 L12: -0.9522 REMARK 3 L13: 0.3159 L23: -1.1641 REMARK 3 S TENSOR REMARK 3 S11: -0.1881 S12: 0.3391 S13: 0.4240 REMARK 3 S21: -0.0590 S22: -0.0226 S23: -0.3673 REMARK 3 S31: -0.0616 S32: 0.3295 S33: 0.1965 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 56 THROUGH 65 ) REMARK 3 ORIGIN FOR THE GROUP (A): 25.1588 -24.1201 -11.2990 REMARK 3 T TENSOR REMARK 3 T11: 0.4559 T22: 0.6491 REMARK 3 T33: 0.4540 T12: 0.0647 REMARK 3 T13: 0.0921 T23: 0.0579 REMARK 3 L TENSOR REMARK 3 L11: 2.0667 L22: 1.1441 REMARK 3 L33: 0.4095 L12: 0.5289 REMARK 3 L13: 0.0834 L23: 0.2602 REMARK 3 S TENSOR REMARK 3 S11: -0.0835 S12: 1.3882 S13: 0.1064 REMARK 3 S21: -0.5084 S22: -0.3396 S23: -0.0761 REMARK 3 S31: 0.3238 S32: 0.4854 S33: 0.0592 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 66 THROUGH 79 ) REMARK 3 ORIGIN FOR THE GROUP (A): 18.3845 -26.2950 -3.2939 REMARK 3 T TENSOR REMARK 3 T11: 0.2539 T22: 0.2583 REMARK 3 T33: 0.3172 T12: 0.0487 REMARK 3 T13: 0.0090 T23: -0.0046 REMARK 3 L TENSOR REMARK 3 L11: 3.6260 L22: 2.3033 REMARK 3 L33: 0.9093 L12: -0.7727 REMARK 3 L13: 0.1689 L23: 0.0587 REMARK 3 S TENSOR REMARK 3 S11: 0.2794 S12: 0.5907 S13: -0.1280 REMARK 3 S21: -0.2784 S22: -0.1311 S23: 0.0176 REMARK 3 S31: 0.3168 S32: 0.1544 S33: 0.0512 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 80 THROUGH 89 ) REMARK 3 ORIGIN FOR THE GROUP (A): 32.6237 -33.3888 10.6540 REMARK 3 T TENSOR REMARK 3 T11: 0.2884 T22: 0.4970 REMARK 3 T33: 0.3270 T12: 0.0741 REMARK 3 T13: -0.0068 T23: 0.0061 REMARK 3 L TENSOR REMARK 3 L11: 7.5026 L22: 8.2109 REMARK 3 L33: 8.2960 L12: -0.6204 REMARK 3 L13: -0.3864 L23: -0.2297 REMARK 3 S TENSOR REMARK 3 S11: -0.1682 S12: -1.1615 S13: -0.1038 REMARK 3 S21: 0.5048 S22: 0.3648 S23: -0.0341 REMARK 3 S31: -0.4039 S32: 1.0345 S33: -0.2192 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 90 THROUGH 97 ) REMARK 3 ORIGIN FOR THE GROUP (A): 9.6597 -36.2204 5.4814 REMARK 3 T TENSOR REMARK 3 T11: 0.2882 T22: 0.2780 REMARK 3 T33: 0.6553 T12: 0.0005 REMARK 3 T13: -0.0023 T23: 0.0472 REMARK 3 L TENSOR REMARK 3 L11: 1.0240 L22: 5.9822 REMARK 3 L33: 7.3126 L12: 2.0059 REMARK 3 L13: -1.8185 L23: -0.7272 REMARK 3 S TENSOR REMARK 3 S11: 0.1009 S12: -0.4430 S13: -1.4193 REMARK 3 S21: 0.4543 S22: 0.0324 S23: 0.8781 REMARK 3 S31: 0.6278 S32: -0.6089 S33: -0.1134 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 15 THROUGH 46 ) REMARK 3 ORIGIN FOR THE GROUP (A): 9.9417 -17.5657 8.8047 REMARK 3 T TENSOR REMARK 3 T11: 0.2453 T22: 0.2568 REMARK 3 T33: 0.3154 T12: 0.0571 REMARK 3 T13: -0.0430 T23: -0.0186 REMARK 3 L TENSOR REMARK 3 L11: 4.1353 L22: 2.9715 REMARK 3 L33: 2.3850 L12: 0.3922 REMARK 3 L13: 0.2393 L23: -0.2103 REMARK 3 S TENSOR REMARK 3 S11: -0.0939 S12: -0.4150 S13: 0.2600 REMARK 3 S21: 0.2696 S22: -0.0279 S23: -0.3573 REMARK 3 S31: -0.0421 S32: 0.1039 S33: 0.0254 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 47 THROUGH 66 ) REMARK 3 ORIGIN FOR THE GROUP (A): 8.5192 -15.5156 17.3213 REMARK 3 T TENSOR REMARK 3 T11: 0.4172 T22: 0.5561 REMARK 3 T33: 0.4657 T12: 0.1061 REMARK 3 T13: -0.0875 T23: -0.0502 REMARK 3 L TENSOR REMARK 3 L11: 3.9572 L22: 3.3162 REMARK 3 L33: 4.7283 L12: -3.4603 REMARK 3 L13: -1.6469 L23: 0.2262 REMARK 3 S TENSOR REMARK 3 S11: -0.3186 S12: -0.7636 S13: 0.9158 REMARK 3 S21: 0.5752 S22: 0.3546 S23: -0.6774 REMARK 3 S31: -0.5299 S32: 0.2787 S33: 0.1576 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 67 THROUGH 112 ) REMARK 3 ORIGIN FOR THE GROUP (A): 2.6825 -22.3358 -2.6011 REMARK 3 T TENSOR REMARK 3 T11: 0.1854 T22: 0.1775 REMARK 3 T33: 0.2730 T12: 0.0289 REMARK 3 T13: -0.0125 T23: 0.0241 REMARK 3 L TENSOR REMARK 3 L11: 3.7500 L22: 0.6932 REMARK 3 L33: 3.9759 L12: -0.1126 REMARK 3 L13: -0.0190 L23: -0.1102 REMARK 3 S TENSOR REMARK 3 S11: -0.0182 S12: 0.1137 S13: -0.0163 REMARK 3 S21: -0.0562 S22: -0.0032 S23: -0.0969 REMARK 3 S31: -0.0881 S32: 0.0294 S33: -0.0040 REMARK 3 TLS GROUP : 16 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 1 THROUGH 7 ) REMARK 3 ORIGIN FOR THE GROUP (A): -27.8541 -10.0545 -54.1082 REMARK 3 T TENSOR REMARK 3 T11: 1.2650 T22: 1.4242 REMARK 3 T33: 0.2676 T12: 0.0994 REMARK 3 T13: -0.2070 T23: -0.4568 REMARK 3 L TENSOR REMARK 3 L11: 2.1600 L22: 4.1489 REMARK 3 L33: 4.5086 L12: -0.2444 REMARK 3 L13: 0.4112 L23: -1.0005 REMARK 3 S TENSOR REMARK 3 S11: 0.1965 S12: 0.7622 S13: -0.6291 REMARK 3 S21: -0.9035 S22: -0.0932 S23: 0.4708 REMARK 3 S31: 0.5966 S32: -0.6150 S33: -0.1287 REMARK 3 TLS GROUP : 17 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 8 THROUGH 16 ) REMARK 3 ORIGIN FOR THE GROUP (A): -26.4187 -12.2584 -48.5717 REMARK 3 T TENSOR REMARK 3 T11: 1.0935 T22: 0.6092 REMARK 3 T33: 0.5773 T12: -0.0892 REMARK 3 T13: -0.2002 T23: -0.0553 REMARK 3 L TENSOR REMARK 3 L11: 2.5160 L22: 6.3119 REMARK 3 L33: 1.5601 L12: 1.0477 REMARK 3 L13: -1.9706 L23: -0.4691 REMARK 3 S TENSOR REMARK 3 S11: -0.4318 S12: 0.6212 S13: -1.1189 REMARK 3 S21: 0.0184 S22: 0.4122 S23: 0.5417 REMARK 3 S31: 0.8995 S32: -0.6690 S33: 0.0242 REMARK 3 TLS GROUP : 18 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 17 THROUGH 22 ) REMARK 3 ORIGIN FOR THE GROUP (A): -37.7305 -3.1961 -58.2029 REMARK 3 T TENSOR REMARK 3 T11: 1.0398 T22: 1.8216 REMARK 3 T33: 0.9003 T12: 0.0934 REMARK 3 T13: -0.4769 T23: 0.2776 REMARK 3 L TENSOR REMARK 3 L11: 0.0411 L22: 0.0540 REMARK 3 L33: 0.0353 L12: 0.0430 REMARK 3 L13: -0.0171 L23: -0.0159 REMARK 3 S TENSOR REMARK 3 S11: 0.3609 S12: 0.4682 S13: -0.5533 REMARK 3 S21: -0.1580 S22: 0.0362 S23: 0.2638 REMARK 3 S31: 0.1499 S32: -0.3360 S33: -0.2704 REMARK 3 TLS GROUP : 19 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 23 THROUGH 44 ) REMARK 3 ORIGIN FOR THE GROUP (A): -34.1070 -4.9876 -44.8175 REMARK 3 T TENSOR REMARK 3 T11: 0.6812 T22: 0.9420 REMARK 3 T33: 0.5013 T12: -0.0587 REMARK 3 T13: -0.1805 T23: -0.0607 REMARK 3 L TENSOR REMARK 3 L11: 3.5291 L22: 5.9445 REMARK 3 L33: 4.8624 L12: 0.3718 REMARK 3 L13: -0.1060 L23: 0.8929 REMARK 3 S TENSOR REMARK 3 S11: 0.2116 S12: 0.3991 S13: -0.5139 REMARK 3 S21: -0.2647 S22: -0.3342 S23: 1.4194 REMARK 3 S31: 0.8242 S32: -1.4978 S33: 0.1476 REMARK 3 TLS GROUP : 20 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 45 THROUGH 56 ) REMARK 3 ORIGIN FOR THE GROUP (A): -29.0193 3.6751 -52.1984 REMARK 3 T TENSOR REMARK 3 T11: 1.2870 T22: 1.0721 REMARK 3 T33: 0.5745 T12: 0.2769 REMARK 3 T13: -0.2544 T23: 0.0020 REMARK 3 L TENSOR REMARK 3 L11: 4.4862 L22: 0.4975 REMARK 3 L33: 1.4123 L12: 0.7085 REMARK 3 L13: 1.4740 L23: -0.3039 REMARK 3 S TENSOR REMARK 3 S11: -0.4018 S12: 0.6469 S13: 0.8261 REMARK 3 S21: -0.9431 S22: -0.0447 S23: 0.5323 REMARK 3 S31: -0.9873 S32: -0.8777 S33: 0.3426 REMARK 3 TLS GROUP : 21 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 57 THROUGH 65 ) REMARK 3 ORIGIN FOR THE GROUP (A): -28.5520 -1.2683 -59.7870 REMARK 3 T TENSOR REMARK 3 T11: 1.3288 T22: 1.4720 REMARK 3 T33: 0.4308 T12: 0.1462 REMARK 3 T13: -0.2013 T23: 0.1027 REMARK 3 L TENSOR REMARK 3 L11: 0.4714 L22: 4.1162 REMARK 3 L33: 0.6228 L12: 0.2767 REMARK 3 L13: 0.0007 L23: 1.5640 REMARK 3 S TENSOR REMARK 3 S11: -0.0762 S12: 0.8660 S13: -0.5653 REMARK 3 S21: -0.8420 S22: -0.1658 S23: -0.0671 REMARK 3 S31: -0.2532 S32: -0.4162 S33: 0.0624 REMARK 3 TLS GROUP : 22 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 66 THROUGH 76 ) REMARK 3 ORIGIN FOR THE GROUP (A): -25.6704 -4.9246 -39.8403 REMARK 3 T TENSOR REMARK 3 T11: 0.6324 T22: 0.4417 REMARK 3 T33: 0.2630 T12: 0.0370 REMARK 3 T13: -0.1390 T23: -0.0421 REMARK 3 L TENSOR REMARK 3 L11: 1.0300 L22: 0.2489 REMARK 3 L33: 5.9026 L12: 0.1928 REMARK 3 L13: 0.6752 L23: -0.9388 REMARK 3 S TENSOR REMARK 3 S11: 0.0856 S12: 0.1964 S13: -0.0377 REMARK 3 S21: -0.7861 S22: -0.1019 S23: 0.4729 REMARK 3 S31: -0.1167 S32: -0.8038 S33: 0.1239 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 9D1Z COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 13-SEP-24. REMARK 100 THE DEPOSITION ID IS D_1000287178. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 19-DEC-23 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 5.0.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97741 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 85054 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.880 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 8.100 REMARK 200 R MERGE (I) : 0.09200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 5.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.97 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 7.40 REMARK 200 R MERGE FOR SHELL (I) : 0.77700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 64.10 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.43 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 10%%KMME, 5% TACSIMATE PH=7.0, 0.1M REMARK 280 HEPES 7.0, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 76.47450 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 76.47450 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 57.47450 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 60.43650 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 57.47450 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 60.43650 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 76.47450 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 57.47450 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 60.43650 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 76.47450 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 57.47450 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 60.43650 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 544 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 873 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 941 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLU A 314 REMARK 465 GLU A 315 REMARK 465 GLY A 316 REMARK 465 LEU A 317 REMARK 465 GLY A 318 REMARK 465 ASP A 319 REMARK 465 GLU A 320 REMARK 465 VAL A 378 REMARK 465 SER A 379 REMARK 465 SER A 380 REMARK 465 HIS A 381 REMARK 465 LYS A 382 REMARK 465 GLU B 98 REMARK 465 LEU B 99 REMARK 465 PRO B 100 REMARK 465 ASP B 101 REMARK 465 VAL B 102 REMARK 465 MET B 103 REMARK 465 LYS B 104 REMARK 465 MET C -8 REMARK 465 SER C -7 REMARK 465 TYR C -6 REMARK 465 TYR C -5 REMARK 465 HIS C -4 REMARK 465 HIS C -3 REMARK 465 HIS C -2 REMARK 465 HIS C -1 REMARK 465 HIS C 0 REMARK 465 HIS C 1 REMARK 465 ASP C 2 REMARK 465 TYR C 3 REMARK 465 ASP C 4 REMARK 465 ILE C 5 REMARK 465 PRO C 6 REMARK 465 THR C 7 REMARK 465 THR C 8 REMARK 465 GLU C 9 REMARK 465 ASN C 10 REMARK 465 LEU C 11 REMARK 465 TYR C 12 REMARK 465 GLY C 13 REMARK 465 GLN C 14 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 67 CG CD NE CZ NH1 NH2 REMARK 470 GLN A 69 CG CD OE1 NE2 REMARK 470 LYS A 114 CG CD CE NZ REMARK 470 ARG A 119 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 173 CG CD CE NZ REMARK 470 ARG A 215 CG CD NE CZ NH1 NH2 REMARK 470 GLN B 65 CG CD OE1 NE2 REMARK 470 ARG C 63 CG CD NE CZ NH1 NH2 REMARK 470 LYS D 11 CG CD CE NZ REMARK 470 GLU D 16 CG CD OE1 OE2 REMARK 470 GLU D 24 CG CD OE1 OE2 REMARK 470 LYS D 33 CG CD CE NZ REMARK 470 ARG D 54 CG CD NE CZ NH1 NH2 REMARK 470 GLN D 62 CG CD OE1 NE2 REMARK 470 LYS D 63 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH C 245 O HOH C 278 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 853 O HOH A 853 4555 2.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 ACE A 0 C MET A 1 N 0.157 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 MET A 1 CA - CB - CG ANGL. DEV. = -13.2 DEGREES REMARK 500 MET A 1 N - CA - C ANGL. DEV. = 19.5 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 VAL A 73 139.17 -172.35 REMARK 500 ASP A 86 -115.32 54.54 REMARK 500 SER A 207 25.03 -145.76 REMARK 500 PHE A 276 60.30 60.28 REMARK 500 HIS B 10 -115.96 51.23 REMARK 500 ASP B 47 -119.65 49.76 REMARK 500 ALA B 81 -73.46 -98.41 REMARK 500 ASP B 82 -74.01 -124.46 REMARK 500 ALA C 53 -132.65 55.42 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 975 DISTANCE = 6.47 ANGSTROMS REMARK 525 HOH A 976 DISTANCE = 8.38 ANGSTROMS DBREF 9D1Z A 1 382 UNP Q9BQ90 KLDC3_HUMAN 1 382 DBREF 9D1Z B 1 104 UNP Q15370 ELOB_HUMAN 1 104 DBREF 9D1Z C 17 112 UNP Q15369 ELOC_HUMAN 17 112 DBREF 9D1Z D 1 76 UNP P0CG48 UBC_HUMAN 1 76 SEQADV 9D1Z ACE A 0 UNP Q9BQ90 ACETYLATION SEQADV 9D1Z LYS A 382 UNP Q9BQ90 GLY 382 CONFLICT SEQADV 9D1Z MET C -8 UNP Q15369 INITIATING METHIONINE SEQADV 9D1Z SER C -7 UNP Q15369 EXPRESSION TAG SEQADV 9D1Z TYR C -6 UNP Q15369 EXPRESSION TAG SEQADV 9D1Z TYR C -5 UNP Q15369 EXPRESSION TAG SEQADV 9D1Z HIS C -4 UNP Q15369 EXPRESSION TAG SEQADV 9D1Z HIS C -3 UNP Q15369 EXPRESSION TAG SEQADV 9D1Z HIS C -2 UNP Q15369 EXPRESSION TAG SEQADV 9D1Z HIS C -1 UNP Q15369 EXPRESSION TAG SEQADV 9D1Z HIS C 0 UNP Q15369 EXPRESSION TAG SEQADV 9D1Z HIS C 1 UNP Q15369 EXPRESSION TAG SEQADV 9D1Z ASP C 2 UNP Q15369 EXPRESSION TAG SEQADV 9D1Z TYR C 3 UNP Q15369 EXPRESSION TAG SEQADV 9D1Z ASP C 4 UNP Q15369 EXPRESSION TAG SEQADV 9D1Z ILE C 5 UNP Q15369 EXPRESSION TAG SEQADV 9D1Z PRO C 6 UNP Q15369 EXPRESSION TAG SEQADV 9D1Z THR C 7 UNP Q15369 EXPRESSION TAG SEQADV 9D1Z THR C 8 UNP Q15369 EXPRESSION TAG SEQADV 9D1Z GLU C 9 UNP Q15369 EXPRESSION TAG SEQADV 9D1Z ASN C 10 UNP Q15369 EXPRESSION TAG SEQADV 9D1Z LEU C 11 UNP Q15369 EXPRESSION TAG SEQADV 9D1Z TYR C 12 UNP Q15369 EXPRESSION TAG SEQADV 9D1Z GLY C 13 UNP Q15369 EXPRESSION TAG SEQADV 9D1Z GLN C 14 UNP Q15369 EXPRESSION TAG SEQADV 9D1Z GLY C 15 UNP Q15369 EXPRESSION TAG SEQADV 9D1Z SER C 16 UNP Q15369 EXPRESSION TAG SEQADV 9D1Z GLN D 75 UNP P0CG48 GLY 75 ENGINEERED MUTATION SEQRES 1 A 383 ACE MET LEU ARG TRP THR VAL HIS LEU GLU GLY GLY PRO SEQRES 2 A 383 ARG ARG VAL ASN HIS ALA ALA VAL ALA VAL GLY HIS ARG SEQRES 3 A 383 VAL TYR SER PHE GLY GLY TYR CYS SER GLY GLU ASP TYR SEQRES 4 A 383 GLU THR LEU ARG GLN ILE ASP VAL HIS ILE PHE ASN ALA SEQRES 5 A 383 VAL SER LEU ARG TRP THR LYS LEU PRO PRO VAL LYS SER SEQRES 6 A 383 ALA ILE ARG GLY GLN ALA PRO VAL VAL PRO TYR MET ARG SEQRES 7 A 383 TYR GLY HIS SER THR VAL LEU ILE ASP ASP THR VAL LEU SEQRES 8 A 383 LEU TRP GLY GLY ARG ASN ASP THR GLU GLY ALA CYS ASN SEQRES 9 A 383 VAL LEU TYR ALA PHE ASP VAL ASN THR HIS LYS TRP PHE SEQRES 10 A 383 THR PRO ARG VAL SER GLY THR VAL PRO GLY ALA ARG ASP SEQRES 11 A 383 GLY HIS SER ALA CYS VAL LEU GLY LYS ILE MET TYR ILE SEQRES 12 A 383 PHE GLY GLY TYR GLU GLN GLN ALA ASP CYS PHE SER ASN SEQRES 13 A 383 ASP ILE HIS LYS LEU ASP THR SER THR MET THR TRP THR SEQRES 14 A 383 LEU ILE CYS THR LYS GLY SER PRO ALA ARG TRP ARG ASP SEQRES 15 A 383 PHE HIS SER ALA THR MET LEU GLY SER HIS MET TYR VAL SEQRES 16 A 383 PHE GLY GLY ARG ALA ASP ARG PHE GLY PRO PHE HIS SER SEQRES 17 A 383 ASN ASN GLU ILE TYR CYS ASN ARG ILE ARG VAL PHE ASP SEQRES 18 A 383 THR ARG THR GLU ALA TRP LEU ASP CYS PRO PRO THR PRO SEQRES 19 A 383 VAL LEU PRO GLU GLY ARG ARG SER HIS SER ALA PHE GLY SEQRES 20 A 383 TYR ASN GLY GLU LEU TYR ILE PHE GLY GLY TYR ASN ALA SEQRES 21 A 383 ARG LEU ASN ARG HIS PHE HIS ASP LEU TRP LYS PHE ASN SEQRES 22 A 383 PRO VAL SER PHE THR TRP LYS LYS ILE GLU PRO LYS GLY SEQRES 23 A 383 LYS GLY PRO CYS PRO ARG ARG ARG GLN CYS CYS CYS ILE SEQRES 24 A 383 VAL GLY ASP LYS ILE VAL LEU PHE GLY GLY THR SER PRO SEQRES 25 A 383 SER PRO GLU GLU GLY LEU GLY ASP GLU PHE ASP LEU ILE SEQRES 26 A 383 ASP HIS SER ASP LEU HIS ILE LEU ASP PHE SER PRO SER SEQRES 27 A 383 LEU LYS THR LEU CYS LYS LEU ALA VAL ILE GLN TYR ASN SEQRES 28 A 383 LEU ASP GLN SER CYS LEU PRO HIS ASP ILE ARG TRP GLU SEQRES 29 A 383 LEU ASN ALA MET THR THR ASN SER ASN ILE SER ARG PRO SEQRES 30 A 383 ILE VAL SER SER HIS LYS SEQRES 1 B 104 MET ASP VAL PHE LEU MET ILE ARG ARG HIS LYS THR THR SEQRES 2 B 104 ILE PHE THR ASP ALA LYS GLU SER SER THR VAL PHE GLU SEQRES 3 B 104 LEU LYS ARG ILE VAL GLU GLY ILE LEU LYS ARG PRO PRO SEQRES 4 B 104 ASP GLU GLN ARG LEU TYR LYS ASP ASP GLN LEU LEU ASP SEQRES 5 B 104 ASP GLY LYS THR LEU GLY GLU CYS GLY PHE THR SER GLN SEQRES 6 B 104 THR ALA ARG PRO GLN ALA PRO ALA THR VAL GLY LEU ALA SEQRES 7 B 104 PHE ARG ALA ASP ASP THR PHE GLU ALA LEU CYS ILE GLU SEQRES 8 B 104 PRO PHE SER SER PRO PRO GLU LEU PRO ASP VAL MET LYS SEQRES 1 C 121 MET SER TYR TYR HIS HIS HIS HIS HIS HIS ASP TYR ASP SEQRES 2 C 121 ILE PRO THR THR GLU ASN LEU TYR GLY GLN GLY SER MET SEQRES 3 C 121 TYR VAL LYS LEU ILE SER SER ASP GLY HIS GLU PHE ILE SEQRES 4 C 121 VAL LYS ARG GLU HIS ALA LEU THR SER GLY THR ILE LYS SEQRES 5 C 121 ALA MET LEU SER GLY PRO GLY GLN PHE ALA GLU ASN GLU SEQRES 6 C 121 THR ASN GLU VAL ASN PHE ARG GLU ILE PRO SER HIS VAL SEQRES 7 C 121 LEU SER LYS VAL CYS MET TYR PHE THR TYR LYS VAL ARG SEQRES 8 C 121 TYR THR ASN SER SER THR GLU ILE PRO GLU PHE PRO ILE SEQRES 9 C 121 ALA PRO GLU ILE ALA LEU GLU LEU LEU MET ALA ALA ASN SEQRES 10 C 121 PHE LEU ASP CYS SEQRES 1 D 76 MET GLN ILE PHE VAL LYS THR LEU THR GLY LYS THR ILE SEQRES 2 D 76 THR LEU GLU VAL GLU PRO SER ASP THR ILE GLU ASN VAL SEQRES 3 D 76 LYS ALA LYS ILE GLN ASP LYS GLU GLY ILE PRO PRO ASP SEQRES 4 D 76 GLN GLN ARG LEU ILE PHE ALA GLY LYS GLN LEU GLU ASP SEQRES 5 D 76 GLY ARG THR LEU SER ASP TYR ASN ILE GLN LYS GLU SER SEQRES 6 D 76 THR LEU HIS LEU VAL LEU ARG LEU ARG GLN GLY HET ACE A 0 3 HET MPD A 401 8 HET MPD A 402 8 HET MPD A 403 8 HET MPD A 404 8 HETNAM ACE ACETYL GROUP HETNAM MPD (4S)-2-METHYL-2,4-PENTANEDIOL FORMUL 1 ACE C2 H4 O FORMUL 5 MPD 4(C6 H14 O2) FORMUL 9 HOH *678(H2 O) HELIX 1 AA1 SER A 337 TYR A 349 1 13 HELIX 2 AA2 PRO A 357 THR A 368 1 12 HELIX 3 AA3 THR B 23 LYS B 36 1 14 HELIX 4 AA4 PRO B 38 ASP B 40 5 3 HELIX 5 AA5 ARG C 33 LEU C 37 1 5 HELIX 6 AA6 SER C 39 SER C 47 1 9 HELIX 7 AA7 PHE C 52 GLU C 56 5 5 HELIX 8 AA8 PRO C 66 THR C 84 1 19 HELIX 9 AA9 ALA C 96 ASP C 111 1 16 HELIX 10 AB1 THR D 22 GLY D 35 1 14 HELIX 11 AB2 PRO D 37 ASP D 39 5 3 HELIX 12 AB3 LEU D 56 ASN D 60 5 5 SHEET 1 AA1 4 ARG A 3 LEU A 8 0 SHEET 2 AA1 4 LEU A 329 ASP A 333 -1 O ASP A 333 N ARG A 3 SHEET 3 AA1 4 LYS A 302 PHE A 306 -1 N LEU A 305 O HIS A 330 SHEET 4 AA1 4 CYS A 295 VAL A 299 -1 N VAL A 299 O LYS A 302 SHEET 1 AA2 4 ALA A 18 VAL A 22 0 SHEET 2 AA2 4 ARG A 25 PHE A 29 -1 O ARG A 25 N VAL A 22 SHEET 3 AA2 4 VAL A 46 ASN A 50 -1 O HIS A 47 N SER A 28 SHEET 4 AA2 4 ARG A 55 LYS A 58 -1 O ARG A 55 N ASN A 50 SHEET 1 AA3 4 SER A 81 ILE A 85 0 SHEET 2 AA3 4 THR A 88 TRP A 92 -1 O THR A 88 N ILE A 85 SHEET 3 AA3 4 TYR A 106 ASP A 109 -1 O PHE A 108 N VAL A 89 SHEET 4 AA3 4 TRP A 115 PHE A 116 -1 O PHE A 116 N ALA A 107 SHEET 1 AA4 5 SER A 121 GLY A 122 0 SHEET 2 AA4 5 THR A 166 LEU A 169 1 O TRP A 167 N SER A 121 SHEET 3 AA4 5 ILE A 157 ASP A 161 -1 N ASP A 161 O THR A 166 SHEET 4 AA4 5 ILE A 139 PHE A 143 -1 N ILE A 142 O HIS A 158 SHEET 5 AA4 5 SER A 132 LEU A 136 -1 N CYS A 134 O TYR A 141 SHEET 1 AA5 3 ARG A 128 ASP A 129 0 SHEET 2 AA5 3 TYR A 146 GLU A 147 -1 O TYR A 146 N ASP A 129 SHEET 3 AA5 3 CYS A 152 PHE A 153 -1 O CYS A 152 N GLU A 147 SHEET 1 AA6 3 ARG A 180 ASP A 181 0 SHEET 2 AA6 3 ARG A 198 ASP A 200 -1 O ARG A 198 N ASP A 181 SHEET 3 AA6 3 GLU A 210 TYR A 212 -1 O ILE A 211 N ALA A 199 SHEET 1 AA7 4 SER A 184 LEU A 188 0 SHEET 2 AA7 4 HIS A 191 PHE A 195 -1 O TYR A 193 N THR A 186 SHEET 3 AA7 4 ARG A 217 ASP A 220 -1 O ARG A 217 N VAL A 194 SHEET 4 AA7 4 ALA A 225 TRP A 226 -1 O ALA A 225 N ASP A 220 SHEET 1 AA8 4 SER A 243 TYR A 247 0 SHEET 2 AA8 4 GLU A 250 ASN A 258 -1 O TYR A 252 N PHE A 245 SHEET 3 AA8 4 ARG A 263 ASN A 272 -1 O PHE A 271 N LEU A 251 SHEET 4 AA8 4 THR A 277 ILE A 281 -1 O LYS A 279 N LYS A 270 SHEET 1 AA9 2 THR A 309 PRO A 311 0 SHEET 2 AA9 2 LEU A 323 ASP A 325 -1 O ILE A 324 N SER A 310 SHEET 1 AB1 8 GLN B 49 LEU B 50 0 SHEET 2 AB1 8 GLN B 42 LYS B 46 -1 N LYS B 46 O GLN B 49 SHEET 3 AB1 8 ALA B 73 PHE B 79 -1 O ALA B 78 N ARG B 43 SHEET 4 AB1 8 ASP B 2 ARG B 9 1 N MET B 6 O VAL B 75 SHEET 5 AB1 8 THR B 12 LYS B 19 -1 O ALA B 18 N VAL B 3 SHEET 6 AB1 8 GLU C 28 LYS C 32 1 O ILE C 30 N PHE B 15 SHEET 7 AB1 8 TYR C 18 ILE C 22 -1 N LEU C 21 O PHE C 29 SHEET 8 AB1 8 GLU C 59 ASN C 61 1 O VAL C 60 N ILE C 22 SHEET 1 AB2 5 THR D 12 GLU D 16 0 SHEET 2 AB2 5 GLN D 2 THR D 7 -1 N VAL D 5 O ILE D 13 SHEET 3 AB2 5 THR D 66 LEU D 71 1 O LEU D 67 N PHE D 4 SHEET 4 AB2 5 GLN D 41 PHE D 45 -1 N ILE D 44 O HIS D 68 SHEET 5 AB2 5 LYS D 48 GLN D 49 -1 O LYS D 48 N PHE D 45 LINK C ACE A 0 N MET A 1 1555 1555 1.49 CRYST1 114.949 120.873 152.949 90.00 90.00 90.00 C 2 2 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008700 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008273 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006538 0.00000 HETATM 1 C ACE A 0 2.217 -14.967 -9.124 1.00 45.25 C HETATM 2 O ACE A 0 2.707 -15.377 -8.115 1.00 23.94 O HETATM 3 CH3 ACE A 0 2.418 -13.473 -9.334 1.00 49.39 C