HEADER TRANSCRIPTION/DNA 09-AUG-24 9D2X TITLE SPID ETS-DOMAIN (168-273) IN COMPLEX WITH THE DNA SEQUENCE TITLE 2 D(AATAAAAGGAAGTGGG) COMPND MOL_ID: 1; COMPND 2 MOLECULE: DNA (5'-D(*AP*AP*TP*AP*AP*AP*AP*GP*GP*AP*AP*GP*TP*GP*GP*G)- COMPND 3 3'); COMPND 4 CHAIN: C, A; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: DNA (5'-D(*TP*CP*CP*CP*AP*CP*TP*TP*CP*CP*TP*TP*TP*TP*AP*T)- COMPND 8 3'); COMPND 9 CHAIN: D, B; COMPND 10 ENGINEERED: YES; COMPND 11 MOL_ID: 3; COMPND 12 MOLECULE: SPID; COMPND 13 CHAIN: F, E; COMPND 14 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 SYNTHETIC: YES; SOURCE 3 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 4 ORGANISM_TAXID: 32630; SOURCE 5 MOL_ID: 2; SOURCE 6 SYNTHETIC: YES; SOURCE 7 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 8 ORGANISM_TAXID: 32630; SOURCE 9 MOL_ID: 3; SOURCE 10 ORGANISM_SCIENTIFIC: RAJA EGLANTERIA; SOURCE 11 ORGANISM_COMMON: CLEARNOSE SKATE; SOURCE 12 ORGANISM_TAXID: 33514; SOURCE 13 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 14 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS TRANSCRIPTION FACTOR, PROTEIN-DNA COMPLEX, ETS FAMILY, ETS, PU.1, KEYWDS 2 TRANSCRIPTION-DNA COMPLEX, TRANSCRIPTION EXPDTA X-RAY DIFFRACTION AUTHOR J.R.TERRELL,T.N.VERNON,G.M.K.POON REVDAT 1 30-OCT-24 9D2X 0 JRNL AUTH J.R.TERRELL,T.N.VERNON,G.M.K.POON JRNL TITL THE STRUCTURE OF THE DNA-BINDING DOMAIN OF THE CLASS III JRNL TITL 2 ETS-FAMILY MEMBER SPID FROM RAJA EGLANTERIA JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.29 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.19.2_4158 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.29 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 32.35 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.960 REMARK 3 COMPLETENESS FOR RANGE (%) : 91.9 REMARK 3 NUMBER OF REFLECTIONS : 15077 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.226 REMARK 3 R VALUE (WORKING SET) : 0.221 REMARK 3 FREE R VALUE : 0.270 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.010 REMARK 3 FREE R VALUE TEST SET COUNT : 1509 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 32.3500 - 5.0900 0.89 1201 134 0.1615 0.2100 REMARK 3 2 5.0900 - 4.0400 0.88 1182 130 0.1776 0.2058 REMARK 3 3 4.0400 - 3.5300 0.89 1192 134 0.2028 0.2562 REMARK 3 4 3.5300 - 3.2100 0.89 1201 135 0.2165 0.2766 REMARK 3 5 3.2100 - 2.9800 0.92 1216 134 0.2685 0.3044 REMARK 3 6 2.9800 - 2.8000 0.94 1267 140 0.2945 0.3654 REMARK 3 7 2.8000 - 2.6600 0.95 1264 141 0.2996 0.3668 REMARK 3 8 2.6600 - 2.5500 0.95 1281 142 0.3004 0.3537 REMARK 3 9 2.5500 - 2.4500 0.94 1246 139 0.2922 0.3618 REMARK 3 10 2.4500 - 2.3600 0.94 1260 140 0.2955 0.3489 REMARK 3 11 2.3600 - 2.2900 0.93 1258 140 0.2952 0.3215 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.354 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 31.341 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 45.81 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 54.73 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.012 2973 REMARK 3 ANGLE : 0.863 4257 REMARK 3 CHIRALITY : 0.040 453 REMARK 3 PLANARITY : 0.007 311 REMARK 3 DIHEDRAL : 23.930 1214 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ALL REMARK 3 ORIGIN FOR THE GROUP (A): 0.6069 -7.0412 -19.2551 REMARK 3 T TENSOR REMARK 3 T11: 0.2336 T22: 0.3787 REMARK 3 T33: 0.3597 T12: 0.0300 REMARK 3 T13: 0.0261 T23: 0.0699 REMARK 3 L TENSOR REMARK 3 L11: 0.9009 L22: 1.5710 REMARK 3 L33: 1.5909 L12: 0.9151 REMARK 3 L13: 0.3167 L23: 0.7999 REMARK 3 S TENSOR REMARK 3 S11: -0.0345 S12: -0.0100 S13: 0.0097 REMARK 3 S21: 0.0128 S22: 0.0100 S23: 0.0565 REMARK 3 S31: 0.0149 S32: 0.0782 S33: 0.0387 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : 3 REMARK 3 NCS GROUP : ens_1 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: NULL REMARK 3 SELECTION : chain "A" REMARK 3 ATOM PAIRS NUMBER : NULL REMARK 3 RMSD : NULL REMARK 3 NCS OPERATOR : 2 REMARK 3 REFERENCE SELECTION: NULL REMARK 3 SELECTION : chain "C" REMARK 3 ATOM PAIRS NUMBER : NULL REMARK 3 RMSD : NULL REMARK 3 NCS GROUP : ens_2 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: NULL REMARK 3 SELECTION : (chain "B" and resid 17 through 32) REMARK 3 ATOM PAIRS NUMBER : NULL REMARK 3 RMSD : NULL REMARK 3 NCS OPERATOR : 2 REMARK 3 REFERENCE SELECTION: NULL REMARK 3 SELECTION : chain "D" REMARK 3 ATOM PAIRS NUMBER : NULL REMARK 3 RMSD : NULL REMARK 3 NCS GROUP : ens_3 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: NULL REMARK 3 SELECTION : (chain "E" and (resid 169 through 180 or REMARK 3 (resid 181 and (name N or name CA or name REMARK 3 C or name O or name CB )) or resid 182 REMARK 3 through 203 or (resid 204 and (name N or REMARK 3 name CA or name C or name O or name CB )) REMARK 3 or resid 205 through 256)) REMARK 3 ATOM PAIRS NUMBER : NULL REMARK 3 RMSD : NULL REMARK 3 NCS OPERATOR : 2 REMARK 3 REFERENCE SELECTION: NULL REMARK 3 SELECTION : (chain "F" and (resid 169 through 185 or REMARK 3 (resid 186 and (name N or name CA or name REMARK 3 C or name O or name CB )) or resid 187 REMARK 3 through 244 or (resid 245 through 246 and REMARK 3 (name N or name CA or name C or name O or REMARK 3 name CB )) or resid 247 through 256)) REMARK 3 ATOM PAIRS NUMBER : NULL REMARK 3 RMSD : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 9D2X COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 12-AUG-24. REMARK 100 THE DEPOSITION ID IS D_1000287226. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-OCT-22 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS-II REMARK 200 BEAMLINE : 17-ID-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.920119 REMARK 200 MONOCHROMATOR : VERTICAL DCM REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 9M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 15141 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.290 REMARK 200 RESOLUTION RANGE LOW (A) : 32.350 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 91.9 REMARK 200 DATA REDUNDANCY : 1.700 REMARK 200 R MERGE (I) : 0.03905 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 11.0200 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.29 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.37 REMARK 200 COMPLETENESS FOR SHELL (%) : 93.1 REMARK 200 DATA REDUNDANCY IN SHELL : 1.70 REMARK 200 R MERGE FOR SHELL (I) : 0.33180 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.190 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 40.64 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.07 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: LOOPED DIRECTLY FROM INDEX HT (HAMPTON REMARK 280 RESEARCH) CONDITION F12 FROM A ROBOT SCREEN - 200 MM NACL, 100 REMARK 280 MM HEPES, PH=7.5, 25% W/V PEG3350, PH 7.5, VAPOR DIFFUSION, REMARK 280 SITTING DROP, TEMPERATURE 295K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, E REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET F 164 REMARK 465 GLY F 165 REMARK 465 VAL F 166 REMARK 465 ARG F 167 REMARK 465 LYS F 168 REMARK 465 LEU F 257 REMARK 465 GLY F 258 REMARK 465 GLN F 259 REMARK 465 LYS F 260 REMARK 465 LYS F 261 REMARK 465 SER F 262 REMARK 465 GLU F 263 REMARK 465 CYS F 264 REMARK 465 LYS F 265 REMARK 465 THR F 266 REMARK 465 SER F 267 REMARK 465 TYR F 268 REMARK 465 MET F 269 REMARK 465 PRO F 270 REMARK 465 MET E 164 REMARK 465 GLY E 165 REMARK 465 VAL E 166 REMARK 465 ARG E 167 REMARK 465 LYS E 168 REMARK 465 LEU E 257 REMARK 465 GLY E 258 REMARK 465 GLN E 259 REMARK 465 LYS E 260 REMARK 465 LYS E 261 REMARK 465 SER E 262 REMARK 465 GLU E 263 REMARK 465 CYS E 264 REMARK 465 LYS E 265 REMARK 465 THR E 266 REMARK 465 SER E 267 REMARK 465 TYR E 268 REMARK 465 MET E 269 REMARK 465 PRO E 270 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS F 169 CG CD CE NZ REMARK 470 LYS F 181 CG CD CE NZ REMARK 470 LYS F 204 CG CD CE NZ REMARK 470 LYS E 169 CG CD CE NZ REMARK 470 ARG E 186 CG CD NE CZ NH1 NH2 REMARK 470 LYS E 245 CG CD CE NZ REMARK 470 LYS E 246 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 H22 DG C 8 O2 DC D 26 1.49 REMARK 500 H21 DG A 8 O2 DC B 26 1.51 REMARK 500 OP2 DC B 25 O HOH B 201 2.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O4 DT D 17 H61 DA A 1 1456 1.57 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 DC B 22 C5' DC B 22 C4' 0.044 REMARK 500 DT B 24 C5 DT B 24 C7 -0.050 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 DG C 8 O4' - C1' - N9 ANGL. DEV. = 2.0 DEGREES REMARK 500 DG C 14 C3' - C2' - C1' ANGL. DEV. = -5.0 DEGREES REMARK 500 DG C 14 O4' - C1' - N9 ANGL. DEV. = 3.4 DEGREES REMARK 500 DG A 8 O4' - C1' - N9 ANGL. DEV. = 1.9 DEGREES REMARK 500 REMARK 500 REMARK: NULL DBREF 9D2X C 1 16 PDB 9D2X 9D2X 1 16 DBREF 9D2X D 17 32 PDB 9D2X 9D2X 17 32 DBREF 9D2X F 165 270 UNP Q9DEW5 Q9DEW5_RAJEG 168 273 DBREF 9D2X A 1 16 PDB 9D2X 9D2X 1 16 DBREF 9D2X B 17 32 PDB 9D2X 9D2X 17 32 DBREF 9D2X E 165 270 UNP Q9DEW5 Q9DEW5_RAJEG 168 273 SEQADV 9D2X MET F 164 UNP Q9DEW5 INITIATING METHIONINE SEQADV 9D2X MET E 164 UNP Q9DEW5 INITIATING METHIONINE SEQRES 1 C 16 DA DA DT DA DA DA DA DG DG DA DA DG DT SEQRES 2 C 16 DG DG DG SEQRES 1 D 16 DT DC DC DC DA DC DT DT DC DC DT DT DT SEQRES 2 D 16 DT DA DT SEQRES 1 F 107 MET GLY VAL ARG LYS LYS VAL ARG LEU TYR GLN PHE LEU SEQRES 2 F 107 LEU GLU LEU LEU LYS ASN GLY ASP MET ARG ASP CYS VAL SEQRES 3 F 107 TRP TRP VAL ASP ARG GLU LYS GLY THR PHE GLN PHE SER SEQRES 4 F 107 SER LYS HIS LYS GLU MET LEU ALA HIS ARG TRP GLY MET SEQRES 5 F 107 GLN LYS GLY ASN ARG LYS LYS MET THR TYR GLN LYS MET SEQRES 6 F 107 ALA ARG ALA LEU ARG ASN TYR GLY LYS THR GLY GLU ILE SEQRES 7 F 107 ARG LYS ILE LYS LYS LYS LEU THR TYR GLN PHE ASP GLY SEQRES 8 F 107 MET LEU LEU GLY GLN LYS LYS SER GLU CYS LYS THR SER SEQRES 9 F 107 TYR MET PRO SEQRES 1 A 16 DA DA DT DA DA DA DA DG DG DA DA DG DT SEQRES 2 A 16 DG DG DG SEQRES 1 B 16 DT DC DC DC DA DC DT DT DC DC DT DT DT SEQRES 2 B 16 DT DA DT SEQRES 1 E 107 MET GLY VAL ARG LYS LYS VAL ARG LEU TYR GLN PHE LEU SEQRES 2 E 107 LEU GLU LEU LEU LYS ASN GLY ASP MET ARG ASP CYS VAL SEQRES 3 E 107 TRP TRP VAL ASP ARG GLU LYS GLY THR PHE GLN PHE SER SEQRES 4 E 107 SER LYS HIS LYS GLU MET LEU ALA HIS ARG TRP GLY MET SEQRES 5 E 107 GLN LYS GLY ASN ARG LYS LYS MET THR TYR GLN LYS MET SEQRES 6 E 107 ALA ARG ALA LEU ARG ASN TYR GLY LYS THR GLY GLU ILE SEQRES 7 E 107 ARG LYS ILE LYS LYS LYS LEU THR TYR GLN PHE ASP GLY SEQRES 8 E 107 MET LEU LEU GLY GLN LYS LYS SER GLU CYS LYS THR SER SEQRES 9 E 107 TYR MET PRO HET EPE B 101 32 HETNAM EPE 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID HETSYN EPE HEPES FORMUL 7 EPE C8 H18 N2 O4 S FORMUL 8 HOH *44(H2 O) HELIX 1 AA1 ARG F 171 GLY F 183 1 13 HELIX 2 AA2 HIS F 205 GLY F 218 1 14 HELIX 3 AA3 THR F 224 ARG F 233 1 10 HELIX 4 AA4 ASN F 234 GLY F 236 5 3 HELIX 5 AA5 ARG E 171 GLY E 183 1 13 HELIX 6 AA6 HIS E 205 GLY E 218 1 14 HELIX 7 AA7 THR E 224 GLY E 236 1 13 SHEET 1 AA1 4 VAL F 189 ASP F 193 0 SHEET 2 AA1 4 THR F 198 PHE F 201 -1 O GLN F 200 N TRP F 190 SHEET 3 AA1 4 THR F 249 PHE F 252 -1 O TYR F 250 N PHE F 199 SHEET 4 AA1 4 ILE F 241 LYS F 243 -1 N ARG F 242 O GLN F 251 SHEET 1 AA2 4 VAL E 189 ASP E 193 0 SHEET 2 AA2 4 THR E 198 PHE E 201 -1 O THR E 198 N VAL E 192 SHEET 3 AA2 4 THR E 249 PHE E 252 -1 O TYR E 250 N PHE E 199 SHEET 4 AA2 4 ILE E 241 LYS E 243 -1 N ARG E 242 O GLN E 251 CRYST1 36.934 42.939 62.534 79.21 81.53 76.19 P 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.027075 -0.006658 -0.003016 0.00000 SCALE2 0.000000 0.023983 -0.003845 0.00000 SCALE3 0.000000 0.000000 0.016374 0.00000 MTRIX1 1 0.159564 0.622034 -0.766559 -8.18749 1 MTRIX2 1 0.355121 -0.760694 -0.543354 -26.49085 1 MTRIX3 1 -0.921102 -0.185521 -0.342277 -23.24816 1 MTRIX1 2 0.098835 0.564860 -0.819247 -11.32824 1 MTRIX2 2 0.412385 -0.772505 -0.482881 -24.06604 1 MTRIX3 2 -0.905633 -0.290119 -0.309290 -24.49431 1 MTRIX1 3 0.169101 0.561755 -0.809837 -10.78126 1 MTRIX2 3 0.492887 -0.759744 -0.424088 -21.67993 1 MTRIX3 3 -0.853503 -0.327445 -0.405355 -28.25964 1