HEADER TRANSFERASE 20-AUG-24 9D8S TITLE CRYSTAL STRUCTURE OF CALCIUM-DEPENDENT PROTEIN KINASE 1 (CDPK1) FROM TITLE 2 CRYPTOSPORIDIUM PARVUM (AMP/MG BOUND) COMPND MOL_ID: 1; COMPND 2 MOLECULE: CALMODULIN-DOMAIN PROTEIN KINASE 1; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: G70-E538; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CRYPTOSPORIDIUM PARVUM IOWA II; SOURCE 3 ORGANISM_TAXID: 353152; SOURCE 4 GENE: CGD3_920; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: CRPAA.01010.B.GT4 KEYWDS SSGCID, STRUCTURAL GENOMICS, SEATTLE STRUCTURAL GENOMICS CENTER FOR KEYWDS 2 INFECTIOUS DISEASE, TRANSFERASE, CRYPTOSPORIDIUM PARVUM, CDPK1 EXPDTA X-RAY DIFFRACTION AUTHOR SEATTLE STRUCTURAL GENOMICS CENTER FOR INFECTIOUS DISEASE (SSGCID) REVDAT 1 04-SEP-24 9D8S 0 JRNL AUTH L.LIU,A.COOPER,S.LOVELL,K.P.BATTAILE JRNL TITL CRYSTAL STRUCTURE OF CALCIUM-DEPENDENT PROTEIN KINASE 1 JRNL TITL 2 (CDPK1) FROM CRYPTOSPORIDIUM PARVUM (AMP/MG BOUND) JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.12 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.21RC1_5156: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.12 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 57.53 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 29638 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.210 REMARK 3 R VALUE (WORKING SET) : 0.209 REMARK 3 FREE R VALUE : 0.243 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.890 REMARK 3 FREE R VALUE TEST SET COUNT : 1450 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 57.5300 - 4.5700 1.00 2898 147 0.2090 0.2210 REMARK 3 2 4.5700 - 3.6300 0.99 2832 161 0.1722 0.2059 REMARK 3 3 3.6200 - 3.1700 1.00 2821 138 0.2064 0.2537 REMARK 3 4 3.1700 - 2.8800 1.00 2827 154 0.2147 0.2612 REMARK 3 5 2.8800 - 2.6700 1.00 2831 122 0.2124 0.2711 REMARK 3 6 2.6700 - 2.5100 1.00 2822 138 0.2300 0.2774 REMARK 3 7 2.5100 - 2.3900 1.00 2771 161 0.2604 0.3129 REMARK 3 8 2.3900 - 2.2800 1.00 2786 142 0.2353 0.2751 REMARK 3 9 2.2800 - 2.2000 1.00 2808 138 0.2608 0.3143 REMARK 3 10 2.2000 - 2.1200 1.00 2792 149 0.2854 0.3096 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.270 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 25.550 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 3355 REMARK 3 ANGLE : 0.789 4532 REMARK 3 CHIRALITY : 0.044 515 REMARK 3 PLANARITY : 0.006 573 REMARK 3 DIHEDRAL : 12.159 1245 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 9 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 69 THROUGH 100 ) REMARK 3 ORIGIN FOR THE GROUP (A): 36.3544 12.0377 4.6473 REMARK 3 T TENSOR REMARK 3 T11: 0.3187 T22: 0.5337 REMARK 3 T33: 0.3969 T12: -0.0507 REMARK 3 T13: 0.1017 T23: -0.0529 REMARK 3 L TENSOR REMARK 3 L11: 1.9614 L22: 0.9386 REMARK 3 L33: 0.6865 L12: 0.5347 REMARK 3 L13: 0.2553 L23: -0.2991 REMARK 3 S TENSOR REMARK 3 S11: -0.1581 S12: 0.6611 S13: -0.6291 REMARK 3 S21: -0.1765 S22: -0.0226 S23: -0.0449 REMARK 3 S31: 0.1253 S32: 0.6021 S33: 0.0104 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 101 THROUGH 143 ) REMARK 3 ORIGIN FOR THE GROUP (A): 26.9595 18.4007 11.2401 REMARK 3 T TENSOR REMARK 3 T11: 0.3658 T22: 0.3339 REMARK 3 T33: 0.4859 T12: -0.0582 REMARK 3 T13: 0.0168 T23: 0.0242 REMARK 3 L TENSOR REMARK 3 L11: 0.2894 L22: 0.3298 REMARK 3 L33: 0.7288 L12: -0.0563 REMARK 3 L13: 0.0948 L23: -0.4992 REMARK 3 S TENSOR REMARK 3 S11: 0.1053 S12: -0.1419 S13: 0.2036 REMARK 3 S21: 0.2931 S22: -0.0821 S23: 0.0799 REMARK 3 S31: -0.2672 S32: 0.1873 S33: -0.0000 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 144 THROUGH 229 ) REMARK 3 ORIGIN FOR THE GROUP (A): 17.9152 6.4437 9.6313 REMARK 3 T TENSOR REMARK 3 T11: 0.3221 T22: 0.2753 REMARK 3 T33: 0.3109 T12: 0.0078 REMARK 3 T13: -0.0186 T23: 0.0110 REMARK 3 L TENSOR REMARK 3 L11: 2.1496 L22: 0.7838 REMARK 3 L33: 1.0063 L12: 0.6096 REMARK 3 L13: -0.0519 L23: 0.3922 REMARK 3 S TENSOR REMARK 3 S11: 0.1256 S12: 0.0035 S13: -0.0301 REMARK 3 S21: 0.0448 S22: -0.0666 S23: -0.0610 REMARK 3 S31: 0.0748 S32: 0.0167 S33: 0.0001 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 230 THROUGH 269 ) REMARK 3 ORIGIN FOR THE GROUP (A): 5.1437 10.2569 5.2516 REMARK 3 T TENSOR REMARK 3 T11: 0.3919 T22: 0.4200 REMARK 3 T33: 0.4097 T12: -0.0163 REMARK 3 T13: 0.0097 T23: 0.0167 REMARK 3 L TENSOR REMARK 3 L11: 0.4902 L22: 0.6268 REMARK 3 L33: 0.3287 L12: -0.2823 REMARK 3 L13: 0.0134 L23: 0.1969 REMARK 3 S TENSOR REMARK 3 S11: 0.0134 S12: 0.1550 S13: 0.0409 REMARK 3 S21: -0.3481 S22: 0.0059 S23: -0.0441 REMARK 3 S31: 0.0007 S32: -0.1386 S33: 0.0001 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 270 THROUGH 322 ) REMARK 3 ORIGIN FOR THE GROUP (A): -2.8511 3.4078 6.5355 REMARK 3 T TENSOR REMARK 3 T11: 0.3503 T22: 0.4470 REMARK 3 T33: 0.4767 T12: -0.0017 REMARK 3 T13: -0.0377 T23: -0.0083 REMARK 3 L TENSOR REMARK 3 L11: 1.3506 L22: 2.3423 REMARK 3 L33: 0.1646 L12: 0.5532 REMARK 3 L13: 0.0189 L23: 0.4917 REMARK 3 S TENSOR REMARK 3 S11: 0.0651 S12: -0.0352 S13: -0.0710 REMARK 3 S21: -0.0918 S22: -0.1488 S23: 0.5396 REMARK 3 S31: 0.1581 S32: -0.5036 S33: 0.0001 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 323 THROUGH 360 ) REMARK 3 ORIGIN FOR THE GROUP (A): 19.3286 -1.8050 30.2719 REMARK 3 T TENSOR REMARK 3 T11: 0.5184 T22: 0.3140 REMARK 3 T33: 0.3631 T12: -0.0229 REMARK 3 T13: 0.0479 T23: 0.0132 REMARK 3 L TENSOR REMARK 3 L11: 0.1480 L22: 0.5162 REMARK 3 L33: 1.6095 L12: 0.0780 REMARK 3 L13: -0.1363 L23: -0.9162 REMARK 3 S TENSOR REMARK 3 S11: -0.1363 S12: -0.0045 S13: -0.1327 REMARK 3 S21: -0.0082 S22: -0.0112 S23: -0.0962 REMARK 3 S31: 0.0715 S32: 0.0579 S33: 0.0000 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 361 THROUGH 392 ) REMARK 3 ORIGIN FOR THE GROUP (A): 32.0329 5.2207 26.0696 REMARK 3 T TENSOR REMARK 3 T11: 0.5900 T22: 0.6068 REMARK 3 T33: 0.4639 T12: -0.0422 REMARK 3 T13: -0.1260 T23: 0.1911 REMARK 3 L TENSOR REMARK 3 L11: 4.0411 L22: 0.1306 REMARK 3 L33: 1.7104 L12: -0.6875 REMARK 3 L13: -1.8675 L23: 0.4259 REMARK 3 S TENSOR REMARK 3 S11: -0.0062 S12: 0.6907 S13: -0.5744 REMARK 3 S21: 0.4737 S22: -0.4043 S23: -0.7622 REMARK 3 S31: 0.2493 S32: 0.5024 S33: -0.9966 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 393 THROUGH 451 ) REMARK 3 ORIGIN FOR THE GROUP (A): 21.2504 2.9924 39.4574 REMARK 3 T TENSOR REMARK 3 T11: 0.6887 T22: 0.4187 REMARK 3 T33: 0.4071 T12: -0.0939 REMARK 3 T13: -0.0434 T23: 0.0088 REMARK 3 L TENSOR REMARK 3 L11: 1.1301 L22: 0.1862 REMARK 3 L33: 1.0943 L12: -0.4444 REMARK 3 L13: -1.1019 L23: 0.4197 REMARK 3 S TENSOR REMARK 3 S11: 0.0017 S12: -0.0716 S13: 0.0492 REMARK 3 S21: 0.3127 S22: -0.0276 S23: -0.1393 REMARK 3 S31: -0.0736 S32: -0.3204 S33: -0.0000 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 452 THROUGH 532 ) REMARK 3 ORIGIN FOR THE GROUP (A): 42.1004 9.3269 24.8331 REMARK 3 T TENSOR REMARK 3 T11: 0.3755 T22: 0.6818 REMARK 3 T33: 0.5730 T12: 0.0336 REMARK 3 T13: -0.0498 T23: 0.0917 REMARK 3 L TENSOR REMARK 3 L11: 0.1967 L22: 0.6946 REMARK 3 L33: 0.8846 L12: -0.2021 REMARK 3 L13: -0.3700 L23: 0.6863 REMARK 3 S TENSOR REMARK 3 S11: -0.1747 S12: -1.2837 S13: -0.0033 REMARK 3 S21: 0.3207 S22: 0.0032 S23: -0.3619 REMARK 3 S31: 0.4629 S32: 0.9556 S33: -0.0368 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 9D8S COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 21-AUG-24. REMARK 100 THE DEPOSITION ID IS D_1000287532. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 03-AUG-24 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS-II REMARK 200 BEAMLINE : 19-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9786 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL SI 111 REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER2 XE 9M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 29675 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.120 REMARK 200 RESOLUTION RANGE LOW (A) : 78.920 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 4.900 REMARK 200 R MERGE (I) : 0.08200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 9.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.12 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.18 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : 4.90 REMARK 200 R MERGE FOR SHELL (I) : 0.98900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.92 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.32 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 25% (W/V) PEG3350, 0.2M DIAMMONIUM REMARK 280 TARTRATE. CRPAA.01010.B.GT4.PW39259 AT 15 MG/ML. COCRYSTALLIZED REMARK 280 WITH 5MM AMP, 4MM MGCL2 AND 2MM CACL2. PLATE: LIU-S-131 A10, REMARK 280 PUCK: PSL-1109, CRYO: 20% (V/V) PEG 200 + 80% (W/V) CRYSTALLANT, REMARK 280 PH 7.0, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 27.87300 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 47 REMARK 465 GLY A 48 REMARK 465 SER A 49 REMARK 465 SER A 50 REMARK 465 HIS A 51 REMARK 465 HIS A 52 REMARK 465 HIS A 53 REMARK 465 HIS A 54 REMARK 465 HIS A 55 REMARK 465 HIS A 56 REMARK 465 SER A 57 REMARK 465 SER A 58 REMARK 465 GLY A 59 REMARK 465 ARG A 60 REMARK 465 GLU A 61 REMARK 465 ASN A 62 REMARK 465 LEU A 63 REMARK 465 TYR A 64 REMARK 465 PHE A 65 REMARK 465 GLN A 66 REMARK 465 GLY A 67 REMARK 465 HIS A 68 REMARK 465 ASN A 114 REMARK 465 LYS A 115 REMARK 465 ASP A 116 REMARK 465 ASN A 426 REMARK 465 GLU A 427 REMARK 465 ASP A 479 REMARK 465 LYS A 480 REMARK 465 ASP A 481 REMARK 465 GLY A 482 REMARK 465 SER A 483 REMARK 465 GLY A 484 REMARK 465 LYS A 485 REMARK 465 ILE A 486 REMARK 465 SER A 487 REMARK 465 THR A 488 REMARK 465 LYS A 489 REMARK 465 GLU A 490 REMARK 465 LEU A 491 REMARK 465 PHE A 492 REMARK 465 LYS A 493 REMARK 465 LEU A 494 REMARK 465 PHE A 495 REMARK 465 SER A 496 REMARK 465 GLN A 497 REMARK 465 ALA A 498 REMARK 465 ASP A 499 REMARK 465 SER A 500 REMARK 465 SER A 501 REMARK 465 ILE A 502 REMARK 465 GLN A 503 REMARK 465 MET A 504 REMARK 465 GLU A 505 REMARK 465 GLU A 506 REMARK 465 LEU A 507 REMARK 465 GLU A 508 REMARK 465 SER A 509 REMARK 465 ILE A 510 REMARK 465 ILE A 511 REMARK 465 GLU A 512 REMARK 465 GLN A 513 REMARK 465 VAL A 514 REMARK 465 ASP A 515 REMARK 465 ASN A 516 REMARK 465 ASN A 517 REMARK 465 LYS A 518 REMARK 465 ASP A 519 REMARK 465 GLY A 520 REMARK 465 GLU A 521 REMARK 465 VAL A 522 REMARK 465 ASP A 523 REMARK 465 ASN A 533 REMARK 465 PHE A 534 REMARK 465 VAL A 535 REMARK 465 ARG A 536 REMARK 465 ASN A 537 REMARK 465 GLU A 538 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 MET A 69 CG SD CE REMARK 470 THR A 117 OG1 CG2 REMARK 470 LEU A 121 CG CD1 CD2 REMARK 470 ARG A 177 CZ NH1 NH2 REMARK 470 LYS A 180 CE NZ REMARK 470 LYS A 211 CG CD CE NZ REMARK 470 LYS A 231 CG CD CE NZ REMARK 470 MET A 232 CG SD CE REMARK 470 LYS A 233 CG CD CE NZ REMARK 470 ASP A 234 CG OD1 OD2 REMARK 470 ARG A 235 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 277 CG CD CE NZ REMARK 470 ARG A 299 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 334 CE NZ REMARK 470 SER A 336 OG REMARK 470 LYS A 363 CG CD CE NZ REMARK 470 LEU A 364 CG CD1 CD2 REMARK 470 GLN A 384 CG CD OE1 NE2 REMARK 470 SER A 422 OG REMARK 470 GLN A 425 CG CD OE1 NE2 REMARK 470 LEU A 466 CG CD1 CD2 REMARK 470 ASN A 525 CG OD1 ND2 REMARK 470 GLU A 526 CG CD OE1 OE2 REMARK 470 GLU A 529 CG CD OE1 OE2 REMARK 470 MET A 530 CG SD CE REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 168 -24.44 70.28 REMARK 500 ARG A 197 -12.65 79.68 REMARK 500 ASP A 198 44.64 -142.91 REMARK 500 TYR A 251 47.19 -140.90 REMARK 500 PHE A 293 54.89 -97.57 REMARK 500 LEU A 313 35.58 -93.93 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 605 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER A 146 OG REMARK 620 2 HOH A 710 O 110.0 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 604 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN A 203 OD1 REMARK 620 2 ASP A 219 OD2 79.4 REMARK 620 3 AMP A 601 O2P 117.2 79.0 REMARK 620 4 HOH A 701 O 80.4 146.3 86.6 REMARK 620 5 HOH A 754 O 81.4 82.6 150.5 120.5 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 602 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 393 OD1 REMARK 620 2 ASN A 395 OD1 87.4 REMARK 620 3 ASP A 397 OD1 88.7 74.0 REMARK 620 4 MET A 399 O 87.2 157.2 83.7 REMARK 620 5 GLU A 404 OE1 104.7 126.5 155.2 76.3 REMARK 620 6 GLU A 404 OE2 89.1 76.8 150.8 125.2 52.1 REMARK 620 7 HOH A 748 O 170.4 86.2 82.7 95.9 84.9 96.3 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 603 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 443 OD1 REMARK 620 2 ASP A 445 OD1 69.3 REMARK 620 3 SER A 447 OG 91.2 82.7 REMARK 620 4 SER A 449 O 93.2 150.4 73.7 REMARK 620 5 GLU A 451 OE1 167.0 100.3 79.5 92.8 REMARK 620 6 GLU A 454 OE1 112.3 120.7 150.9 87.6 79.4 REMARK 620 7 GLU A 454 OE2 93.1 74.3 153.3 132.2 91.3 46.7 REMARK 620 N 1 2 3 4 5 6 DBREF 9D8S A 70 538 UNP A3FQ16 A3FQ16_CRYPI 70 538 SEQADV 9D8S MET A 47 UNP A3FQ16 INITIATING METHIONINE SEQADV 9D8S GLY A 48 UNP A3FQ16 EXPRESSION TAG SEQADV 9D8S SER A 49 UNP A3FQ16 EXPRESSION TAG SEQADV 9D8S SER A 50 UNP A3FQ16 EXPRESSION TAG SEQADV 9D8S HIS A 51 UNP A3FQ16 EXPRESSION TAG SEQADV 9D8S HIS A 52 UNP A3FQ16 EXPRESSION TAG SEQADV 9D8S HIS A 53 UNP A3FQ16 EXPRESSION TAG SEQADV 9D8S HIS A 54 UNP A3FQ16 EXPRESSION TAG SEQADV 9D8S HIS A 55 UNP A3FQ16 EXPRESSION TAG SEQADV 9D8S HIS A 56 UNP A3FQ16 EXPRESSION TAG SEQADV 9D8S SER A 57 UNP A3FQ16 EXPRESSION TAG SEQADV 9D8S SER A 58 UNP A3FQ16 EXPRESSION TAG SEQADV 9D8S GLY A 59 UNP A3FQ16 EXPRESSION TAG SEQADV 9D8S ARG A 60 UNP A3FQ16 EXPRESSION TAG SEQADV 9D8S GLU A 61 UNP A3FQ16 EXPRESSION TAG SEQADV 9D8S ASN A 62 UNP A3FQ16 EXPRESSION TAG SEQADV 9D8S LEU A 63 UNP A3FQ16 EXPRESSION TAG SEQADV 9D8S TYR A 64 UNP A3FQ16 EXPRESSION TAG SEQADV 9D8S PHE A 65 UNP A3FQ16 EXPRESSION TAG SEQADV 9D8S GLN A 66 UNP A3FQ16 EXPRESSION TAG SEQADV 9D8S GLY A 67 UNP A3FQ16 EXPRESSION TAG SEQADV 9D8S HIS A 68 UNP A3FQ16 EXPRESSION TAG SEQADV 9D8S MET A 69 UNP A3FQ16 EXPRESSION TAG SEQRES 1 A 492 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 492 ARG GLU ASN LEU TYR PHE GLN GLY HIS MET GLY THR PHE SEQRES 3 A 492 ALA GLU ARG TYR ASN ILE VAL CYS MET LEU GLY LYS GLY SEQRES 4 A 492 SER PHE GLY GLU VAL LEU LYS CYS LYS ASP ARG ILE THR SEQRES 5 A 492 GLN GLN GLU TYR ALA VAL LYS VAL ILE ASN LYS ALA SER SEQRES 6 A 492 ALA LYS ASN LYS ASP THR SER THR ILE LEU ARG GLU VAL SEQRES 7 A 492 GLU LEU LEU LYS LYS LEU ASP HIS PRO ASN ILE MET LYS SEQRES 8 A 492 LEU PHE GLU ILE LEU GLU ASP SER SER SER PHE TYR ILE SEQRES 9 A 492 VAL GLY GLU LEU TYR THR GLY GLY GLU LEU PHE ASP GLU SEQRES 10 A 492 ILE ILE LYS ARG LYS ARG PHE SER GLU HIS ASP ALA ALA SEQRES 11 A 492 ARG ILE ILE LYS GLN VAL PHE SER GLY ILE THR TYR MET SEQRES 12 A 492 HIS LYS HIS ASN ILE VAL HIS ARG ASP LEU LYS PRO GLU SEQRES 13 A 492 ASN ILE LEU LEU GLU SER LYS GLU LYS ASP CYS ASP ILE SEQRES 14 A 492 LYS ILE ILE ASP PHE GLY LEU SER THR CYS PHE GLN GLN SEQRES 15 A 492 ASN THR LYS MET LYS ASP ARG ILE GLY THR ALA TYR TYR SEQRES 16 A 492 ILE ALA PRO GLU VAL LEU ARG GLY THR TYR ASP GLU LYS SEQRES 17 A 492 CYS ASP VAL TRP SER ALA GLY VAL ILE LEU TYR ILE LEU SEQRES 18 A 492 LEU SER GLY THR PRO PRO PHE TYR GLY LYS ASN GLU TYR SEQRES 19 A 492 ASP ILE LEU LYS ARG VAL GLU THR GLY LYS TYR ALA PHE SEQRES 20 A 492 ASP LEU PRO GLN TRP ARG THR ILE SER ASP ASP ALA LYS SEQRES 21 A 492 ASP LEU ILE ARG LYS MET LEU THR PHE HIS PRO SER LEU SEQRES 22 A 492 ARG ILE THR ALA THR GLN CYS LEU GLU HIS PRO TRP ILE SEQRES 23 A 492 GLN LYS TYR SER SER GLU THR PRO THR ILE SER ASP LEU SEQRES 24 A 492 PRO SER LEU GLU SER ALA MET THR ASN ILE ARG GLN PHE SEQRES 25 A 492 GLN ALA GLU LYS LYS LEU ALA GLN ALA ALA LEU LEU TYR SEQRES 26 A 492 MET ALA SER LYS LEU THR THR LEU ASP GLU THR LYS GLN SEQRES 27 A 492 LEU THR GLU ILE PHE ARG LYS LEU ASP THR ASN ASN ASP SEQRES 28 A 492 GLY MET LEU ASP ARG ASP GLU LEU VAL ARG GLY TYR HIS SEQRES 29 A 492 GLU PHE MET ARG LEU LYS GLY VAL ASP SER ASN SER LEU SEQRES 30 A 492 ILE GLN ASN GLU GLY SER THR ILE GLU ASP GLN ILE ASP SEQRES 31 A 492 SER LEU MET PRO LEU LEU ASP MET ASP GLY SER GLY SER SEQRES 32 A 492 ILE GLU TYR SER GLU PHE ILE ALA SER ALA ILE ASP ARG SEQRES 33 A 492 THR ILE LEU LEU SER ARG GLU ARG MET GLU ARG ALA PHE SEQRES 34 A 492 LYS MET PHE ASP LYS ASP GLY SER GLY LYS ILE SER THR SEQRES 35 A 492 LYS GLU LEU PHE LYS LEU PHE SER GLN ALA ASP SER SER SEQRES 36 A 492 ILE GLN MET GLU GLU LEU GLU SER ILE ILE GLU GLN VAL SEQRES 37 A 492 ASP ASN ASN LYS ASP GLY GLU VAL ASP PHE ASN GLU PHE SEQRES 38 A 492 VAL GLU MET LEU GLN ASN PHE VAL ARG ASN GLU HET AMP A 601 23 HET CA A 602 1 HET CA A 603 1 HET MG A 604 1 HET MG A 605 1 HET CL A 606 1 HETNAM AMP ADENOSINE MONOPHOSPHATE HETNAM CA CALCIUM ION HETNAM MG MAGNESIUM ION HETNAM CL CHLORIDE ION FORMUL 2 AMP C10 H14 N5 O7 P FORMUL 3 CA 2(CA 2+) FORMUL 5 MG 2(MG 2+) FORMUL 7 CL CL 1- FORMUL 8 HOH *57(H2 O) HELIX 1 AA1 THR A 71 ARG A 75 1 5 HELIX 2 AA2 ALA A 110 ALA A 112 5 3 HELIX 3 AA3 SER A 118 LYS A 129 1 12 HELIX 4 AA4 GLU A 159 LYS A 168 1 10 HELIX 5 AA5 SER A 171 HIS A 192 1 22 HELIX 6 AA6 LYS A 200 GLU A 202 5 3 HELIX 7 AA7 ASN A 229 LYS A 233 5 5 HELIX 8 AA8 ASP A 234 TYR A 240 1 7 HELIX 9 AA9 TYR A 241 ILE A 242 5 2 HELIX 10 AB1 ALA A 243 GLY A 249 5 7 HELIX 11 AB2 ASP A 252 GLY A 270 1 19 HELIX 12 AB3 ASN A 278 GLY A 289 1 12 HELIX 13 AB4 LEU A 295 ILE A 301 5 7 HELIX 14 AB5 SER A 302 LEU A 313 1 12 HELIX 15 AB6 THR A 322 GLU A 328 1 7 HELIX 16 AB7 HIS A 329 TYR A 335 1 7 HELIX 17 AB8 THR A 341 SER A 343 5 3 HELIX 18 AB9 ASP A 344 GLU A 361 1 18 HELIX 19 AC1 LYS A 362 THR A 377 1 16 HELIX 20 AC2 THR A 378 ASP A 393 1 16 HELIX 21 AC3 ASP A 401 GLY A 417 1 17 HELIX 22 AC4 ASP A 419 GLN A 425 5 7 HELIX 23 AC5 THR A 430 ASP A 443 1 14 HELIX 24 AC6 GLU A 451 ILE A 460 1 10 HELIX 25 AC7 THR A 463 LEU A 466 5 4 HELIX 26 AC8 SER A 467 MET A 477 1 11 HELIX 27 AC9 ASN A 525 GLN A 532 1 8 SHEET 1 AA1 5 TYR A 76 LYS A 84 0 SHEET 2 AA1 5 GLU A 89 ASP A 95 -1 O LYS A 92 N CYS A 80 SHEET 3 AA1 5 GLU A 101 ASN A 108 -1 O TYR A 102 N CYS A 93 SHEET 4 AA1 5 SER A 147 GLY A 152 -1 O GLY A 152 N ALA A 103 SHEET 5 AA1 5 LEU A 138 GLU A 143 -1 N PHE A 139 O VAL A 151 SHEET 1 AA2 2 ILE A 204 LEU A 206 0 SHEET 2 AA2 2 ILE A 215 ILE A 217 -1 O LYS A 216 N LEU A 205 LINK OG SER A 146 MG MG A 605 1555 1555 2.62 LINK OD1 ASN A 203 MG MG A 604 1555 1555 2.37 LINK OD2 ASP A 219 MG MG A 604 1555 1555 2.37 LINK OD1 ASP A 393 CA CA A 602 1555 1555 2.25 LINK OD1 ASN A 395 CA CA A 602 1555 1555 2.30 LINK OD1 ASP A 397 CA CA A 602 1555 1555 2.37 LINK O MET A 399 CA CA A 602 1555 1555 2.22 LINK OE1 GLU A 404 CA CA A 602 1555 1555 2.43 LINK OE2 GLU A 404 CA CA A 602 1555 1555 2.53 LINK OD1 ASP A 443 CA CA A 603 1555 1555 2.19 LINK OD1 ASP A 445 CA CA A 603 1555 1555 2.40 LINK OG SER A 447 CA CA A 603 1555 1555 2.39 LINK O SER A 449 CA CA A 603 1555 1555 2.39 LINK OE1 GLU A 451 CA CA A 603 1555 1555 2.45 LINK OE1 GLU A 454 CA CA A 603 1555 1555 2.43 LINK OE2 GLU A 454 CA CA A 603 1555 1555 2.94 LINK O2P AMP A 601 MG MG A 604 1555 1555 2.18 LINK CA CA A 602 O HOH A 748 1555 1555 2.11 LINK MG MG A 604 O HOH A 701 1555 1555 2.45 LINK MG MG A 604 O HOH A 754 1555 1555 2.34 LINK MG MG A 605 O HOH A 710 1555 2655 2.84 CRYST1 59.746 55.746 81.954 90.00 105.64 90.00 P 1 21 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016738 0.000000 0.004686 0.00000 SCALE2 0.000000 0.017939 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012671 0.00000