HEADER PROTEIN BINDING 23-AUG-24 9DB5 TITLE A DARPIN FUSED TO THE 1TEL CRYSTALLIZATION CHAPERONE VIA A PROLINE- TITLE 2 ALANINE LINKER COMPND MOL_ID: 1; COMPND 2 MOLECULE: TRANSCRIPTION FACTOR ETV6,DARPIN; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: RESIDUES 47-121 (UNIPROT NUMBERING) OF TRANSCRIPTION FACTOR COMPND 5 ETV6; COMPND 6 SYNONYM: ETS TRANSLOCATION VARIANT 6,ETS-RELATED PROTEIN TEL1,TEL; COMPND 7 ENGINEERED: YES; COMPND 8 OTHER_DETAILS: PRO-ALA LINKING THE ETV6 AND THE DARPIN SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS, SYNTHETIC CONSTRUCT; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606, 32630; SOURCE 5 GENE: ETV6, TEL, TEL1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI B; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 37762; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3) KEYWDS TELSAM, DARPIN, ETV6, DESIGNED ANKYRIN REPEAT PROTEIN, PROTEIN KEYWDS 2 BINDING EXPDTA X-RAY DIFFRACTION AUTHOR M.J.PEDROZA ROMO,J.C.AVERETT,A.KELIILIKI,E.W.WILSON,C.SMITH,D.HANSEN, AUTHOR 2 B.AVERETT,J.GONZALEZ,E.NOAKES,R.NICKLES,T.DOUKOV,J.D.MOODY REVDAT 3 13-MAY-26 9DB5 1 JRNL REVDAT 2 01-OCT-25 9DB5 1 JRNL REVDAT 1 09-OCT-24 9DB5 0 JRNL AUTH M.J.PEDROZA ROMO,A.KELIILIKI,J.C.AVERETT,J.F.GONZALEZ, JRNL AUTH 2 E.NOAKES,E.W.WILSON,C.SMITH,B.AVERETT,D.HANSEN,R.NICKLES, JRNL AUTH 3 M.BRADFORD,S.SOLEIMANI,T.SMITH,S.NAWARATHNAGE, JRNL AUTH 4 P.SAMARWICKRAMA,A.KELSCH,D.BUNN,C.STEWART,W.ABIODUN, JRNL AUTH 5 E.TSUBAKI,S.BROWN,T.I.DOUKOV,J.D.MOODY JRNL TITL OPTIMAL 1TEL-TARGET PROTEIN LINKER CHARACTER IS TARGET JRNL TITL 2 PROTEIN-DEPENDENT. JRNL REF ACTA CRYSTALLOGR D STRUCT V. 82 516 2026 JRNL REF 2 BIOL JRNL REFN ISSN 2059-7983 JRNL PMID 41945409 JRNL DOI 10.1107/S2059798326002494 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH M.J.PEDROZA ROMO,A.KELIILIKI,J.C.AVERETT,J.F.GONZALEZ, REMARK 1 AUTH 2 E.NOAKES,E.W.WILSON,C.SMITH,B.AVERETT,D.HANSEN,R.NICKLES, REMARK 1 AUTH 3 M.BRADFORD,S.SOLEIMANI,T.SMITH,S.NAWARATHNAGE, REMARK 1 AUTH 4 P.SAMARWICKRAMA,A.KELSCH,D.BUNN,C.STEWART,W.ABIODUN, REMARK 1 AUTH 5 E.TSUBAKI,S.BROWN,T.I.DOUKOV,J.D.MOODY REMARK 1 TITL OPTIMAL TELSAM-TARGET PROTEIN LINKER CHARACTER IS TARGET REMARK 1 TITL 2 PROTEIN-DEPENDENT. REMARK 1 REF BIORXIV 2025 REMARK 1 REFN ISSN 2692-8205 REMARK 1 PMID 40950120 REMARK 1 DOI 10.1101/2025.08.29.672704 REMARK 2 REMARK 2 RESOLUTION. 1.57 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.20.1_4487 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.57 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 48.87 REMARK 3 MIN(FOBS/SIGMA_FOBS) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 94.1 REMARK 3 NUMBER OF REFLECTIONS : 33052 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : NULL REMARK 3 R VALUE (WORKING SET) : 0.167 REMARK 3 FREE R VALUE : 0.196 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : 1585 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 48.8700 - 3.4900 0.97 3039 163 0.1581 0.2003 REMARK 3 2 3.4800 - 2.7700 0.98 2999 156 0.1596 0.1868 REMARK 3 3 2.7700 - 2.4200 0.94 2866 157 0.1508 0.1524 REMARK 3 4 2.4200 - 2.2000 0.95 2902 129 0.1485 0.1748 REMARK 3 5 2.2000 - 2.0400 0.90 2722 157 0.1448 0.1743 REMARK 3 6 2.0400 - 1.9200 0.93 2812 149 0.1712 0.1910 REMARK 3 7 1.9200 - 1.8200 0.84 2547 128 0.1976 0.2361 REMARK 3 8 1.8200 - 1.7400 1.00 3032 154 0.1916 0.2685 REMARK 3 9 1.7400 - 1.6800 0.86 2627 114 0.2249 0.2650 REMARK 3 10 1.6800 - 1.6200 1.00 3061 125 0.2293 0.2404 REMARK 3 11 1.6200 - 1.5700 1.00 2985 172 0.2554 0.2725 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : NULL REMARK 3 SHRINKAGE RADIUS : NULL REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : NULL REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : NULL REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 17.08 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.011 1869 REMARK 3 ANGLE : 1.052 2532 REMARK 3 CHIRALITY : 0.059 284 REMARK 3 PLANARITY : 0.008 342 REMARK 3 DIHEDRAL : 5.210 248 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 2 THROUGH 17 ) REMARK 3 ORIGIN FOR THE GROUP (A): 30.4165 4.9118 36.1806 REMARK 3 T TENSOR REMARK 3 T11: 0.2675 T22: 0.1632 REMARK 3 T33: 0.2010 T12: -0.0622 REMARK 3 T13: 0.0272 T23: 0.0013 REMARK 3 L TENSOR REMARK 3 L11: 3.2908 L22: 5.8135 REMARK 3 L33: 1.0049 L12: -1.7536 REMARK 3 L13: 0.7924 L23: -2.3554 REMARK 3 S TENSOR REMARK 3 S11: 0.0094 S12: 0.3761 S13: 0.3845 REMARK 3 S21: -0.3253 S22: -0.0401 S23: -0.5918 REMARK 3 S31: -0.7274 S32: 0.5180 S33: 0.0349 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 18 THROUGH 64 ) REMARK 3 ORIGIN FOR THE GROUP (A): 18.7549 5.4935 42.4969 REMARK 3 T TENSOR REMARK 3 T11: 0.1068 T22: 0.1122 REMARK 3 T33: 0.0595 T12: 0.0046 REMARK 3 T13: 0.0121 T23: 0.0036 REMARK 3 L TENSOR REMARK 3 L11: 1.6697 L22: 4.9136 REMARK 3 L33: 0.8774 L12: 0.0968 REMARK 3 L13: 0.4991 L23: 0.1434 REMARK 3 S TENSOR REMARK 3 S11: 0.0244 S12: -0.1364 S13: -0.0123 REMARK 3 S21: 0.1804 S22: -0.0166 S23: 0.1139 REMARK 3 S31: -0.0235 S32: -0.0981 S33: -0.0090 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 65 THROUGH 115 ) REMARK 3 ORIGIN FOR THE GROUP (A): 23.0407 -6.9511 25.8692 REMARK 3 T TENSOR REMARK 3 T11: 0.1060 T22: 0.1421 REMARK 3 T33: 0.1181 T12: -0.0014 REMARK 3 T13: -0.0139 T23: -0.0197 REMARK 3 L TENSOR REMARK 3 L11: 0.3441 L22: 3.8745 REMARK 3 L33: 2.2045 L12: -1.8396 REMARK 3 L13: -1.7766 L23: 3.3340 REMARK 3 S TENSOR REMARK 3 S11: -0.0008 S12: 0.0039 S13: 0.0360 REMARK 3 S21: -0.2133 S22: 0.0024 S23: 0.0137 REMARK 3 S31: -0.2106 S32: 0.0299 S33: -0.0120 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 116 THROUGH 181 ) REMARK 3 ORIGIN FOR THE GROUP (A): 26.0309 -26.6900 19.7245 REMARK 3 T TENSOR REMARK 3 T11: 0.0899 T22: 0.0795 REMARK 3 T33: 0.1167 T12: 0.0047 REMARK 3 T13: -0.0096 T23: -0.0027 REMARK 3 L TENSOR REMARK 3 L11: 2.6297 L22: 3.5496 REMARK 3 L33: 4.2237 L12: -0.9558 REMARK 3 L13: -0.2885 L23: 0.9576 REMARK 3 S TENSOR REMARK 3 S11: 0.0175 S12: -0.0705 S13: -0.1664 REMARK 3 S21: 0.0452 S22: -0.0007 S23: 0.0662 REMARK 3 S31: 0.2182 S32: -0.0807 S33: -0.0052 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 182 THROUGH 214 ) REMARK 3 ORIGIN FOR THE GROUP (A): 31.9935 -38.3180 13.8121 REMARK 3 T TENSOR REMARK 3 T11: 0.2441 T22: 0.0934 REMARK 3 T33: 0.1806 T12: 0.0673 REMARK 3 T13: -0.0209 T23: -0.0286 REMARK 3 L TENSOR REMARK 3 L11: 4.7714 L22: 4.6266 REMARK 3 L33: 4.9880 L12: -1.0184 REMARK 3 L13: -1.2665 L23: 2.3536 REMARK 3 S TENSOR REMARK 3 S11: 0.1315 S12: 0.0923 S13: -0.1390 REMARK 3 S21: -0.0960 S22: -0.0113 S23: -0.0314 REMARK 3 S31: 0.3547 S32: 0.0947 S33: -0.1173 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 215 THROUGH 235 ) REMARK 3 ORIGIN FOR THE GROUP (A): 38.9417 -44.6846 13.8254 REMARK 3 T TENSOR REMARK 3 T11: 0.3118 T22: 0.1562 REMARK 3 T33: 0.2658 T12: 0.0833 REMARK 3 T13: 0.0287 T23: 0.0172 REMARK 3 L TENSOR REMARK 3 L11: 4.3687 L22: 1.7841 REMARK 3 L33: 7.2930 L12: -0.2707 REMARK 3 L13: -1.3921 L23: -1.6379 REMARK 3 S TENSOR REMARK 3 S11: -0.1062 S12: -0.2611 S13: -0.0621 REMARK 3 S21: 0.3417 S22: -0.0517 S23: -0.0493 REMARK 3 S31: -0.2675 S32: 0.2291 S33: 0.1811 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 9DB5 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 09-SEP-24. REMARK 100 THE DEPOSITION ID IS D_1000287672. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 14-JUN-24 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL12-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.979460 REMARK 200 MONOCHROMATOR : LIQUID NITROGEN-COOLED DOUBLE REMARK 200 CRYSTAL, NON FIXED EXIT SLIT REMARK 200 OPTICS : RH COATED COLLIMATING MIRRORS, K REMARK 200 -B FOCUSING MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER2 XE 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : AUTOPROC REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 33052 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.570 REMARK 200 RESOLUTION RANGE LOW (A) : 48.870 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 94.1 REMARK 200 DATA REDUNDANCY : 13.70 REMARK 200 R MERGE (I) : 0.21620 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.3400 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.57 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.63 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.5 REMARK 200 DATA REDUNDANCY IN SHELL : 14.30 REMARK 200 R MERGE FOR SHELL (I) : 4.19900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.380 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: THIN ROD REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.96 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.46 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 4.0 M AMMONIUM ACETATE, 0.1 M SODIUM REMARK 280 ACETATE TRIHYDRATE, PH 4.6, VAPOR DIFFUSION, TEMPERATURE 294K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 65 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/6 REMARK 290 6555 X-Y,X,Z+5/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 30.54400 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 15.27200 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 22.90800 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 7.63600 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 38.18000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 1 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ILE A 3 CG1 CG2 CD1 REMARK 470 ARG A 4 CG CD NE CZ NH1 NH2 REMARK 470 LEU A 5 CD1 CD2 REMARK 470 ARG A 10 NE CZ NH1 NH2 REMARK 470 LEU A 11 CD1 REMARK 470 ASP A 93 CG OD1 OD2 REMARK 470 GLU A 127 CD OE1 OE2 REMARK 470 LEU A 192 CG CD1 CD2 REMARK 470 ASN A 235 CG OD1 ND2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 487 O HOH A 503 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 314 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 428 O REMARK 620 2 HOH A 491 O 59.7 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 315 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 437 O REMARK 620 2 HOH A 525 O 141.8 REMARK 620 N 1 DBREF 9DB5 A 2 76 UNP P41212 ETV6_HUMAN 47 121 DBREF 9DB5 A 77 235 PDB 9DB5 9DB5 77 235 SEQADV 9DB5 GLY A 1 UNP P41212 EXPRESSION TAG SEQADV 9DB5 SER A 35 UNP P41212 ARG 80 ENGINEERED MUTATION SEQADV 9DB5 GLU A 67 UNP P41212 VAL 112 ENGINEERED MUTATION SEQRES 1 A 235 GLY SER ILE ARG LEU PRO ALA HIS LEU ARG LEU GLN PRO SEQRES 2 A 235 ILE TYR TRP SER ARG ASP ASP VAL ALA GLN TRP LEU LYS SEQRES 3 A 235 TRP ALA GLU ASN GLU PHE SER LEU SER PRO ILE ASP SER SEQRES 4 A 235 ASN THR PHE GLU MET ASN GLY LYS ALA LEU LEU LEU LEU SEQRES 5 A 235 THR LYS GLU ASP PHE ARG TYR ARG SER PRO HIS SER GLY SEQRES 6 A 235 ASP GLU LEU TYR GLU LEU LEU GLN HIS ILE LEU PRO ALA SEQRES 7 A 235 ASP LEU GLY LYS LYS LEU LEU GLU ALA ALA ARG ALA GLY SEQRES 8 A 235 GLN ASP ASP GLU VAL ARG ILE LEU MET ALA ASN GLY ALA SEQRES 9 A 235 ASP VAL ASN ALA THR ASP ASN ASP GLY TYR THR PRO LEU SEQRES 10 A 235 HIS LEU ALA ALA SER ASN GLY HIS LEU GLU ILE VAL GLU SEQRES 11 A 235 VAL LEU LEU LYS ASN GLY ALA ASP VAL ASN ALA SER ASP SEQRES 12 A 235 LEU THR GLY ILE THR PRO LEU HIS ALA ALA ALA ALA THR SEQRES 13 A 235 GLY HIS LEU GLU ILE VAL GLU VAL LEU LEU LYS HIS GLY SEQRES 14 A 235 ALA ASP VAL ASN ALA TYR ASP ASN ASP GLY HIS THR PRO SEQRES 15 A 235 LEU HIS LEU ALA ALA LYS TYR GLY HIS LEU GLU ILE VAL SEQRES 16 A 235 GLU VAL LEU LEU LYS HIS GLY ALA ASP VAL ASN ALA GLN SEQRES 17 A 235 ASP LYS PHE GLY LYS THR ALA PHE ASP ILE SER ILE ASP SEQRES 18 A 235 ASN GLY ASN GLU ASP LEU ALA GLU ILE LEU GLN LYS LEU SEQRES 19 A 235 ASN HET ACY A 301 7 HET ACY A 302 7 HET ACY A 303 7 HET ACY A 304 7 HET ACY A 305 7 HET ACY A 306 7 HET ACY A 307 7 HET ACY A 308 7 HET ACY A 309 7 HET ACY A 310 7 HET ACY A 311 7 HET ACY A 312 7 HET ACY A 313 7 HET NA A 314 1 HET NA A 315 1 HET NA A 316 1 HET NA A 317 1 HET NA A 318 1 HET NA A 319 1 HET NA A 320 1 HET NA A 321 1 HET CL A 322 1 HETNAM ACY ACETIC ACID HETNAM NA SODIUM ION HETNAM CL CHLORIDE ION FORMUL 2 ACY 13(C2 H4 O2) FORMUL 15 NA 8(NA 1+) FORMUL 23 CL CL 1- FORMUL 24 HOH *160(H2 O) HELIX 1 AA1 PRO A 6 LEU A 11 5 6 HELIX 2 AA2 GLN A 12 TRP A 16 5 5 HELIX 3 AA3 SER A 17 SER A 33 1 17 HELIX 4 AA4 ASN A 45 LEU A 50 1 6 HELIX 5 AA5 THR A 53 SER A 61 1 9 HELIX 6 AA6 SER A 64 LEU A 76 1 13 HELIX 7 AA7 ASP A 79 GLY A 91 1 13 HELIX 8 AA8 GLN A 92 ASN A 102 1 11 HELIX 9 AA9 THR A 115 GLY A 124 1 10 HELIX 10 AB1 HIS A 125 ASN A 135 1 11 HELIX 11 AB2 THR A 148 GLY A 157 1 10 HELIX 12 AB3 HIS A 158 HIS A 168 1 11 HELIX 13 AB4 THR A 181 TYR A 189 1 9 HELIX 14 AB5 HIS A 191 HIS A 201 1 11 HELIX 15 AB6 THR A 214 ASN A 222 1 9 HELIX 16 AB7 ASN A 224 LEU A 234 1 11 LINK OG SER A 17 NA NA A 316 1555 1555 2.82 LINK O THR A 41 NA NA A 318 1555 1555 2.70 LINK OXT ACY A 305 NA NA A 319 1555 1555 2.05 LINK NA NA A 314 O HOH A 428 1555 1555 2.41 LINK NA NA A 314 O HOH A 491 1555 1555 2.18 LINK NA NA A 315 O HOH A 437 1555 1555 2.80 LINK NA NA A 315 O HOH A 525 1555 1555 1.98 LINK NA NA A 317 O HOH A 550 1555 1555 2.90 LINK NA NA A 320 O HOH A 527 1555 1555 2.26 LINK NA NA A 321 O HOH A 539 1555 1555 2.29 CRYST1 97.730 97.730 45.816 90.00 90.00 120.00 P 65 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010232 0.005908 0.000000 0.00000 SCALE2 0.000000 0.011815 0.000000 0.00000 SCALE3 0.000000 0.000000 0.021826 0.00000 CONECT 223 3603 CONECT 597 3605 CONECT 3510 3511 3512 3513 CONECT 3511 3510 CONECT 3512 3510 CONECT 3513 3510 3514 3515 3516 CONECT 3514 3513 CONECT 3515 3513 CONECT 3516 3513 CONECT 3517 3518 3519 3520 CONECT 3518 3517 CONECT 3519 3517 CONECT 3520 3517 3521 3522 3523 CONECT 3521 3520 CONECT 3522 3520 CONECT 3523 3520 CONECT 3524 3525 3526 3527 CONECT 3525 3524 CONECT 3526 3524 CONECT 3527 3524 3528 3529 3530 CONECT 3528 3527 CONECT 3529 3527 CONECT 3530 3527 CONECT 3531 3532 3533 3534 CONECT 3532 3531 CONECT 3533 3531 CONECT 3534 3531 3535 3536 3537 CONECT 3535 3534 CONECT 3536 3534 CONECT 3537 3534 CONECT 3538 3539 3540 3541 CONECT 3539 3538 CONECT 3540 3538 3606 CONECT 3541 3538 3542 3543 3544 CONECT 3542 3541 CONECT 3543 3541 CONECT 3544 3541 CONECT 3545 3546 3547 3548 CONECT 3546 3545 CONECT 3547 3545 CONECT 3548 3545 3549 3550 3551 CONECT 3549 3548 CONECT 3550 3548 CONECT 3551 3548 CONECT 3552 3553 3554 3555 CONECT 3553 3552 CONECT 3554 3552 CONECT 3555 3552 3556 3557 3558 CONECT 3556 3555 CONECT 3557 3555 CONECT 3558 3555 CONECT 3559 3560 3561 3562 CONECT 3560 3559 CONECT 3561 3559 CONECT 3562 3559 3563 3564 3565 CONECT 3563 3562 CONECT 3564 3562 CONECT 3565 3562 CONECT 3566 3567 3568 3569 CONECT 3567 3566 CONECT 3568 3566 CONECT 3569 3566 3570 3571 3572 CONECT 3570 3569 CONECT 3571 3569 CONECT 3572 3569 CONECT 3573 3574 3575 3576 CONECT 3574 3573 CONECT 3575 3573 CONECT 3576 3573 3577 3578 3579 CONECT 3577 3576 CONECT 3578 3576 CONECT 3579 3576 CONECT 3580 3581 3582 3583 CONECT 3581 3580 CONECT 3582 3580 CONECT 3583 3580 3584 3585 3586 CONECT 3584 3583 CONECT 3585 3583 CONECT 3586 3583 CONECT 3587 3588 3589 3590 CONECT 3588 3587 CONECT 3589 3587 CONECT 3590 3587 3591 3592 3593 CONECT 3591 3590 CONECT 3592 3590 CONECT 3593 3590 CONECT 3594 3595 3596 3597 CONECT 3595 3594 CONECT 3596 3594 CONECT 3597 3594 3598 3599 3600 CONECT 3598 3597 CONECT 3599 3597 CONECT 3600 3597 CONECT 3601 3637 3700 CONECT 3602 3646 3734 CONECT 3603 223 CONECT 3604 3759 CONECT 3605 597 CONECT 3606 3540 CONECT 3607 3736 CONECT 3608 3748 CONECT 3637 3601 CONECT 3646 3602 CONECT 3700 3601 CONECT 3734 3602 CONECT 3736 3607 CONECT 3748 3608 CONECT 3759 3604 MASTER 361 0 22 16 0 0 0 6 2007 1 108 19 END