data_9DE5 # _entry.id 9DE5 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.402 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 9DE5 pdb_00009de5 10.2210/pdb9de5/pdb WWPDB D_1000287917 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date _pdbx_audit_revision_history.part_number 1 'Structure model' 1 0 2025-03-12 ? 2 'Structure model' 1 1 2025-03-19 ? # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # _pdbx_audit_revision_group.ordinal 1 _pdbx_audit_revision_group.revision_ordinal 2 _pdbx_audit_revision_group.data_content_type 'Structure model' _pdbx_audit_revision_group.group 'Database references' # _pdbx_audit_revision_category.ordinal 1 _pdbx_audit_revision_category.revision_ordinal 2 _pdbx_audit_revision_category.data_content_type 'Structure model' _pdbx_audit_revision_category.category citation # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.page_last' 2 2 'Structure model' '_citation.pdbx_database_id_PubMed' 3 2 'Structure model' '_citation.title' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 9DE5 _pdbx_database_status.recvd_initial_deposition_date 2024-08-28 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # _pdbx_contact_author.id 2 _pdbx_contact_author.email jinwei.zhang@nih.gov _pdbx_contact_author.name_first Jinwei _pdbx_contact_author.name_last Zhang _pdbx_contact_author.name_mi ? _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0002-2114-173X # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Bou-Nader, C.' 1 0000-0003-0955-0204 'Zhang, J.' 2 0000-0002-2114-173X # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Nat Commun' _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 2041-1723 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 16 _citation.language ? _citation.page_first 2252 _citation.page_last 2252 _citation.title 'Structures of complete HIV-1 TAR RNA portray a dynamic platform poised for protein binding and structural remodeling.' _citation.year 2025 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1038/s41467-025-57519-w _citation.pdbx_database_id_PubMed 40050622 _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Bou-Nader, C.' 1 ? primary 'Link, K.A.' 2 ? primary 'Suddala, K.C.' 3 ? primary 'Knutson, J.R.' 4 ? primary 'Zhang, J.' 5 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn 'RNA (55-MER)' 18459.848 4 ? 'U31G, G32A' ? ? 2 polymer syn 'Protein Tat' 2162.533 1 ? ? 'residues 44-60' ? 3 non-polymer syn 'POTASSIUM ION' 39.098 3 ? ? ? ? 4 water nat water 18.015 9 ? ? ? ? # _entity_name_com.entity_id 2 _entity_name_com.name 'Transactivating regulatory protein' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polyribonucleotide no yes '(GTP)GUCUCUCUGGUUAGACCAGAUCUGAGCCGAAAAGCUCUCUGGCUAACUAGGGAACC' GGUCUCUCUGGUUAGACCAGAUCUGAGCCGAAAAGCUCUCUGGCUAACUAGGGAACC C,E,B,D ? 2 'polypeptide(L)' no no GISYGRKKRRQRRRAHQ GISYGRKKRRQRRRAHQ A ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 'POTASSIUM ION' K 4 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GTP n 1 2 G n 1 3 U n 1 4 C n 1 5 U n 1 6 C n 1 7 U n 1 8 C n 1 9 U n 1 10 G n 1 11 G n 1 12 U n 1 13 U n 1 14 A n 1 15 G n 1 16 A n 1 17 C n 1 18 C n 1 19 A n 1 20 G n 1 21 A n 1 22 U n 1 23 C n 1 24 U n 1 25 G n 1 26 A n 1 27 G n 1 28 C n 1 29 C n 1 30 G n 1 31 A n 1 32 A n 1 33 A n 1 34 A n 1 35 G n 1 36 C n 1 37 U n 1 38 C n 1 39 U n 1 40 C n 1 41 U n 1 42 G n 1 43 G n 1 44 C n 1 45 U n 1 46 A n 1 47 A n 1 48 C n 1 49 U n 1 50 A n 1 51 G n 1 52 G n 1 53 G n 1 54 A n 1 55 A n 1 56 C n 1 57 C n 2 1 GLY n 2 2 ILE n 2 3 SER n 2 4 TYR n 2 5 GLY n 2 6 ARG n 2 7 LYS n 2 8 LYS n 2 9 ARG n 2 10 ARG n 2 11 GLN n 2 12 ARG n 2 13 ARG n 2 14 ARG n 2 15 ALA n 2 16 HIS n 2 17 GLN n # loop_ _pdbx_entity_src_syn.entity_id _pdbx_entity_src_syn.pdbx_src_id _pdbx_entity_src_syn.pdbx_alt_source_flag _pdbx_entity_src_syn.pdbx_beg_seq_num _pdbx_entity_src_syn.pdbx_end_seq_num _pdbx_entity_src_syn.organism_scientific _pdbx_entity_src_syn.organism_common_name _pdbx_entity_src_syn.ncbi_taxonomy_id _pdbx_entity_src_syn.details 1 1 sample 1 57 'Human immunodeficiency virus 1' ? 11676 ? 2 1 sample 1 17 'Human immunodeficiency virus 1' ? 11676 ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight A 'RNA linking' y "ADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 C 'RNA linking' y "CYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O8 P' 323.197 G 'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GTP non-polymer n "GUANOSINE-5'-TRIPHOSPHATE" ? 'C10 H16 N5 O14 P3' 523.180 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 K non-polymer . 'POTASSIUM ION' ? 'K 1' 39.098 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 U 'RNA linking' y "URIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O9 P' 324.181 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GTP 1 2 2 GTP GTP C . n A 1 2 G 2 3 3 G G C . n A 1 3 U 3 4 4 U U C . n A 1 4 C 4 5 5 C C C . n A 1 5 U 5 6 6 U U C . n A 1 6 C 6 7 7 C C C . n A 1 7 U 7 8 8 U U C . n A 1 8 C 8 9 9 C C C . n A 1 9 U 9 10 10 U U C . n A 1 10 G 10 11 11 G G C . n A 1 11 G 11 12 12 G G C . n A 1 12 U 12 13 13 U U C . n A 1 13 U 13 14 14 U U C . n A 1 14 A 14 15 15 A A C . n A 1 15 G 15 16 16 G G C . n A 1 16 A 16 17 17 A A C . n A 1 17 C 17 18 18 C C C . n A 1 18 C 18 19 19 C C C . n A 1 19 A 19 20 20 A A C . n A 1 20 G 20 21 21 G G C . n A 1 21 A 21 22 22 A A C . n A 1 22 U 22 23 23 U U C . n A 1 23 C 23 24 ? ? ? C . n A 1 24 U 24 25 ? ? ? C . n A 1 25 G 25 26 26 G G C . n A 1 26 A 26 27 27 A A C . n A 1 27 G 27 28 28 G G C . n A 1 28 C 28 29 29 C C C . n A 1 29 C 29 30 30 C C C . n A 1 30 G 30 31 31 G G C . n A 1 31 A 31 32 32 A A C . n A 1 32 A 32 33 33 A A C . n A 1 33 A 33 34 34 A A C . n A 1 34 A 34 35 35 A A C . n A 1 35 G 35 36 36 G G C . n A 1 36 C 36 37 37 C C C . n A 1 37 U 37 38 38 U U C . n A 1 38 C 38 39 39 C C C . n A 1 39 U 39 40 40 U U C . n A 1 40 C 40 41 41 C C C . n A 1 41 U 41 42 42 U U C . n A 1 42 G 42 43 43 G G C . n A 1 43 G 43 44 44 G G C . n A 1 44 C 44 45 45 C C C . n A 1 45 U 45 46 46 U U C . n A 1 46 A 46 47 47 A A C . n A 1 47 A 47 48 48 A A C . n A 1 48 C 48 49 49 C C C . n A 1 49 U 49 50 50 U U C . n A 1 50 A 50 51 51 A A C . n A 1 51 G 51 52 52 G G C . n A 1 52 G 52 53 53 G G C . n A 1 53 G 53 54 54 G G C . n A 1 54 A 54 55 55 A A C . n A 1 55 A 55 56 56 A A C . n A 1 56 C 56 57 57 C C C . n A 1 57 C 57 58 58 C C C . n B 1 1 GTP 1 2 2 GTP GTP E . n B 1 2 G 2 3 3 G G E . n B 1 3 U 3 4 4 U U E . n B 1 4 C 4 5 5 C C E . n B 1 5 U 5 6 6 U U E . n B 1 6 C 6 7 7 C C E . n B 1 7 U 7 8 8 U U E . n B 1 8 C 8 9 9 C C E . n B 1 9 U 9 10 10 U U E . n B 1 10 G 10 11 11 G G E . n B 1 11 G 11 12 12 G G E . n B 1 12 U 12 13 13 U U E . n B 1 13 U 13 14 14 U U E . n B 1 14 A 14 15 15 A A E . n B 1 15 G 15 16 16 G G E . n B 1 16 A 16 17 17 A A E . n B 1 17 C 17 18 18 C C E . n B 1 18 C 18 19 19 C C E . n B 1 19 A 19 20 20 A A E . n B 1 20 G 20 21 21 G G E . n B 1 21 A 21 22 22 A A E . n B 1 22 U 22 23 23 U U E . n B 1 23 C 23 24 24 C C E . n B 1 24 U 24 25 25 U U E . n B 1 25 G 25 26 26 G G E . n B 1 26 A 26 27 27 A A E . n B 1 27 G 27 28 28 G G E . n B 1 28 C 28 29 29 C C E . n B 1 29 C 29 30 30 C C E . n B 1 30 G 30 31 31 G G E . n B 1 31 A 31 32 32 A A E . n B 1 32 A 32 33 33 A A E . n B 1 33 A 33 34 34 A A E . n B 1 34 A 34 35 35 A A E . n B 1 35 G 35 36 36 G G E . n B 1 36 C 36 37 37 C C E . n B 1 37 U 37 38 38 U U E . n B 1 38 C 38 39 39 C C E . n B 1 39 U 39 40 40 U U E . n B 1 40 C 40 41 41 C C E . n B 1 41 U 41 42 42 U U E . n B 1 42 G 42 43 43 G G E . n B 1 43 G 43 44 44 G G E . n B 1 44 C 44 45 45 C C E . n B 1 45 U 45 46 46 U U E . n B 1 46 A 46 47 47 A A E . n B 1 47 A 47 48 48 A A E . n B 1 48 C 48 49 49 C C E . n B 1 49 U 49 50 50 U U E . n B 1 50 A 50 51 51 A A E . n B 1 51 G 51 52 52 G G E . n B 1 52 G 52 53 53 G G E . n B 1 53 G 53 54 54 G G E . n B 1 54 A 54 55 55 A A E . n B 1 55 A 55 56 56 A A E . n B 1 56 C 56 57 57 C C E . n B 1 57 C 57 58 58 C C E . n C 1 1 GTP 1 2 2 GTP GTP B . n C 1 2 G 2 3 3 G G B . n C 1 3 U 3 4 4 U U B . n C 1 4 C 4 5 5 C C B . n C 1 5 U 5 6 6 U U B . n C 1 6 C 6 7 7 C C B . n C 1 7 U 7 8 8 U U B . n C 1 8 C 8 9 9 C C B . n C 1 9 U 9 10 10 U U B . n C 1 10 G 10 11 11 G G B . n C 1 11 G 11 12 12 G G B . n C 1 12 U 12 13 13 U U B . n C 1 13 U 13 14 14 U U B . n C 1 14 A 14 15 15 A A B . n C 1 15 G 15 16 16 G G B . n C 1 16 A 16 17 17 A A B . n C 1 17 C 17 18 18 C C B . n C 1 18 C 18 19 19 C C B . n C 1 19 A 19 20 20 A A B . n C 1 20 G 20 21 21 G G B . n C 1 21 A 21 22 22 A A B . n C 1 22 U 22 23 23 U U B . n C 1 23 C 23 24 24 C C B . n C 1 24 U 24 25 25 U U B . n C 1 25 G 25 26 26 G G B . n C 1 26 A 26 27 27 A A B . n C 1 27 G 27 28 28 G G B . n C 1 28 C 28 29 29 C C B . n C 1 29 C 29 30 30 C C B . n C 1 30 G 30 31 31 G G B . n C 1 31 A 31 32 32 A A B . n C 1 32 A 32 33 33 A A B . n C 1 33 A 33 34 34 A A B . n C 1 34 A 34 35 35 A A B . n C 1 35 G 35 36 36 G G B . n C 1 36 C 36 37 37 C C B . n C 1 37 U 37 38 38 U U B . n C 1 38 C 38 39 39 C C B . n C 1 39 U 39 40 40 U U B . n C 1 40 C 40 41 41 C C B . n C 1 41 U 41 42 42 U U B . n C 1 42 G 42 43 43 G G B . n C 1 43 G 43 44 44 G G B . n C 1 44 C 44 45 45 C C B . n C 1 45 U 45 46 46 U U B . n C 1 46 A 46 47 47 A A B . n C 1 47 A 47 48 48 A A B . n C 1 48 C 48 49 49 C C B . n C 1 49 U 49 50 50 U U B . n C 1 50 A 50 51 51 A A B . n C 1 51 G 51 52 52 G G B . n C 1 52 G 52 53 53 G G B . n C 1 53 G 53 54 54 G G B . n C 1 54 A 54 55 55 A A B . n C 1 55 A 55 56 56 A A B . n C 1 56 C 56 57 57 C C B . n C 1 57 C 57 58 58 C C B . n D 1 1 GTP 1 2 2 GTP GTP D . n D 1 2 G 2 3 3 G G D . n D 1 3 U 3 4 4 U U D . n D 1 4 C 4 5 5 C C D . n D 1 5 U 5 6 6 U U D . n D 1 6 C 6 7 7 C C D . n D 1 7 U 7 8 8 U U D . n D 1 8 C 8 9 9 C C D . n D 1 9 U 9 10 10 U U D . n D 1 10 G 10 11 11 G G D . n D 1 11 G 11 12 12 G G D . n D 1 12 U 12 13 13 U U D . n D 1 13 U 13 14 14 U U D . n D 1 14 A 14 15 15 A A D . n D 1 15 G 15 16 16 G G D . n D 1 16 A 16 17 17 A A D . n D 1 17 C 17 18 18 C C D . n D 1 18 C 18 19 19 C C D . n D 1 19 A 19 20 20 A A D . n D 1 20 G 20 21 21 G G D . n D 1 21 A 21 22 22 A A D . n D 1 22 U 22 23 ? ? ? D . n D 1 23 C 23 24 ? ? ? D . n D 1 24 U 24 25 ? ? ? D . n D 1 25 G 25 26 26 G G D . n D 1 26 A 26 27 27 A A D . n D 1 27 G 27 28 28 G G D . n D 1 28 C 28 29 29 C C D . n D 1 29 C 29 30 30 C C D . n D 1 30 G 30 31 31 G G D . n D 1 31 A 31 32 32 A A D . n D 1 32 A 32 33 33 A A D . n D 1 33 A 33 34 34 A A D . n D 1 34 A 34 35 35 A A D . n D 1 35 G 35 36 36 G G D . n D 1 36 C 36 37 37 C C D . n D 1 37 U 37 38 38 U U D . n D 1 38 C 38 39 39 C C D . n D 1 39 U 39 40 40 U U D . n D 1 40 C 40 41 41 C C D . n D 1 41 U 41 42 42 U U D . n D 1 42 G 42 43 43 G G D . n D 1 43 G 43 44 44 G G D . n D 1 44 C 44 45 45 C C D . n D 1 45 U 45 46 46 U U D . n D 1 46 A 46 47 47 A A D . n D 1 47 A 47 48 48 A A D . n D 1 48 C 48 49 49 C C D . n D 1 49 U 49 50 50 U U D . n D 1 50 A 50 51 51 A A D . n D 1 51 G 51 52 52 G G D . n D 1 52 G 52 53 53 G G D . n D 1 53 G 53 54 54 G G D . n D 1 54 A 54 55 55 A A D . n D 1 55 A 55 56 56 A A D . n D 1 56 C 56 57 57 C C D . n D 1 57 C 57 58 58 C C D . n E 2 1 GLY 1 44 44 GLY GLY A . n E 2 2 ILE 2 45 45 ILE ILE A . n E 2 3 SER 3 46 46 SER SER A . n E 2 4 TYR 4 47 47 TYR TYR A . n E 2 5 GLY 5 48 48 GLY GLY A . n E 2 6 ARG 6 49 49 ARG ARG A . n E 2 7 LYS 7 50 50 LYS LYS A . n E 2 8 LYS 8 51 51 LYS LYS A . n E 2 9 ARG 9 52 52 ARG ARG A . n E 2 10 ARG 10 53 53 ARG ARG A . n E 2 11 GLN 11 54 54 GLN GLN A . n E 2 12 ARG 12 55 55 ARG ARG A . n E 2 13 ARG 13 56 56 ARG ARG A . n E 2 14 ARG 14 57 57 ARG ARG A . n E 2 15 ALA 15 58 58 ALA ALA A . n E 2 16 HIS 16 59 59 HIS HIS A . n E 2 17 GLN 17 60 60 GLN GLN A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code F 3 K 1 101 59 K K C . G 3 K 1 101 59 K K E . H 3 K 1 101 59 K K D . I 4 HOH 1 201 62 HOH HOH C . I 4 HOH 2 202 60 HOH HOH C . I 4 HOH 3 203 63 HOH HOH C . I 4 HOH 4 204 61 HOH HOH C . J 4 HOH 1 201 61 HOH HOH E . J 4 HOH 2 202 60 HOH HOH E . K 4 HOH 1 101 60 HOH HOH B . K 4 HOH 2 102 59 HOH HOH B . L 4 HOH 1 201 60 HOH HOH D . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 C U 23 ? "C5'" ? A U 22 "C5'" 2 1 Y 1 C U 23 ? "C4'" ? A U 22 "C4'" 3 1 Y 1 C U 23 ? "O4'" ? A U 22 "O4'" 4 1 Y 1 C U 23 ? "C3'" ? A U 22 "C3'" 5 1 Y 1 C U 23 ? "O3'" ? A U 22 "O3'" 6 1 Y 1 C U 23 ? "C2'" ? A U 22 "C2'" 7 1 Y 1 C U 23 ? "O2'" ? A U 22 "O2'" 8 1 Y 1 C U 23 ? "C1'" ? A U 22 "C1'" 9 1 Y 1 C U 23 ? N1 ? A U 22 N1 10 1 Y 1 C U 23 ? C2 ? A U 22 C2 11 1 Y 1 C U 23 ? O2 ? A U 22 O2 12 1 Y 1 C U 23 ? N3 ? A U 22 N3 13 1 Y 1 C U 23 ? C4 ? A U 22 C4 14 1 Y 1 C U 23 ? O4 ? A U 22 O4 15 1 Y 1 C U 23 ? C5 ? A U 22 C5 16 1 Y 1 C U 23 ? C6 ? A U 22 C6 17 1 Y 1 E C 24 ? N1 ? B C 23 N1 18 1 Y 1 E C 24 ? C2 ? B C 23 C2 19 1 Y 1 E C 24 ? O2 ? B C 23 O2 20 1 Y 1 E C 24 ? N3 ? B C 23 N3 21 1 Y 1 E C 24 ? C4 ? B C 23 C4 22 1 Y 1 E C 24 ? N4 ? B C 23 N4 23 1 Y 1 E C 24 ? C5 ? B C 23 C5 24 1 Y 1 E C 24 ? C6 ? B C 23 C6 25 1 Y 1 E U 25 ? N1 ? B U 24 N1 26 1 Y 1 E U 25 ? C2 ? B U 24 C2 27 1 Y 1 E U 25 ? O2 ? B U 24 O2 28 1 Y 1 E U 25 ? N3 ? B U 24 N3 29 1 Y 1 E U 25 ? C4 ? B U 24 C4 30 1 Y 1 E U 25 ? O4 ? B U 24 O4 31 1 Y 1 E U 25 ? C5 ? B U 24 C5 32 1 Y 1 E U 25 ? C6 ? B U 24 C6 33 1 Y 1 A ILE 45 ? CG1 ? E ILE 2 CG1 34 1 Y 1 A ILE 45 ? CG2 ? E ILE 2 CG2 35 1 Y 1 A ILE 45 ? CD1 ? E ILE 2 CD1 36 1 Y 1 A LYS 50 ? CG ? E LYS 7 CG 37 1 Y 1 A LYS 50 ? CD ? E LYS 7 CD 38 1 Y 1 A LYS 50 ? CE ? E LYS 7 CE 39 1 Y 1 A LYS 50 ? NZ ? E LYS 7 NZ 40 1 Y 1 A ARG 57 ? CG ? E ARG 14 CG 41 1 Y 1 A ARG 57 ? CD ? E ARG 14 CD 42 1 Y 1 A ARG 57 ? NE ? E ARG 14 NE 43 1 Y 1 A ARG 57 ? CZ ? E ARG 14 CZ 44 1 Y 1 A ARG 57 ? NH1 ? E ARG 14 NH1 45 1 Y 1 A ARG 57 ? NH2 ? E ARG 14 NH2 46 1 Y 1 A GLN 60 ? CG ? E GLN 17 CG 47 1 Y 1 A GLN 60 ? CD ? E GLN 17 CD 48 1 Y 1 A GLN 60 ? OE1 ? E GLN 17 OE1 49 1 Y 1 A GLN 60 ? NE2 ? E GLN 17 NE2 # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.21.1_5286 1 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? xia2 ? ? ? . 2 ? 'data extraction' ? ? ? ? ? ? ? ? ? ? ? PDB_EXTRACT ? ? ? 3.27 3 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 4 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 5 # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 94.606 _cell.angle_beta_esd ? _cell.angle_gamma 90.000 _cell.angle_gamma_esd ? _cell.entry_id 9DE5 _cell.details ? _cell.formula_units_Z ? _cell.length_a 68.872 _cell.length_a_esd ? _cell.length_b 40.515 _cell.length_b_esd ? _cell.length_c 120.406 _cell.length_c_esd ? _cell.volume 334888.225 _cell.volume_esd ? _cell.Z_PDB 8 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 9DE5 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall 'P 2yb' _symmetry.space_group_name_H-M 'P 1 21 1' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 9DE5 _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.20 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 44.17 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? _exptl_crystal.pdbx_mosaic_method ? _exptl_crystal.pdbx_mosaic_block_size ? _exptl_crystal.pdbx_mosaic_block_size_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 5.5 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '12 mM NaCl, 80 mM KCl, 50 mM sodium cacodylate pH 5.5, 2 mM hexamine cobalt and 45% v/v MPD' _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.temp 293 # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS EIGER X 16M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2022-04-15 _diffrn_detector.pdbx_frequency ? _diffrn_detector.id ? _diffrn_detector.number_of_axes ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'APS BEAMLINE 22-ID' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 1 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline 22-ID _diffrn_source.pdbx_synchrotron_site APS # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 9DE5 _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.749 _reflns.d_resolution_low 47.093 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 17526 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 97.84 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 7.4 _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 4.89 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.994 _reflns.pdbx_CC_star ? _reflns.pdbx_R_split ? _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_CC_split_method ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_1 ? _reflns.pdbx_aniso_diffraction_limit_2 ? _reflns.pdbx_aniso_diffraction_limit_3 ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvalue_1 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_2 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_3 ? _reflns.pdbx_orthogonalization_convention ? _reflns.pdbx_percent_possible_ellipsoidal ? _reflns.pdbx_percent_possible_spherical ? _reflns.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns.pdbx_percent_possible_spherical_anomalous ? _reflns.pdbx_redundancy_anomalous ? _reflns.pdbx_CC_half_anomalous ? _reflns.pdbx_absDiff_over_sigma_anomalous ? _reflns.pdbx_percent_possible_anomalous ? _reflns.pdbx_observed_signal_threshold ? _reflns.pdbx_signal_type ? _reflns.pdbx_signal_details ? _reflns.pdbx_signal_software_id ? # _reflns_shell.d_res_high 2.749 _reflns_shell.d_res_low 2.847 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs 1.16 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 1742 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half 0.711 _reflns_shell.pdbx_CC_star ? _reflns_shell.pdbx_R_split ? _reflns_shell.percent_possible_all ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_percent_possible_ellipsoidal ? _reflns_shell.pdbx_percent_possible_spherical ? _reflns_shell.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns_shell.pdbx_percent_possible_spherical_anomalous ? _reflns_shell.pdbx_redundancy_anomalous ? _reflns_shell.pdbx_CC_half_anomalous ? _reflns_shell.pdbx_absDiff_over_sigma_anomalous ? _reflns_shell.pdbx_percent_possible_anomalous ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean 68.21 _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 9DE5 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.75 _refine.ls_d_res_low 47.09 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 17349 _refine.ls_number_reflns_R_free 829 _refine.ls_number_reflns_R_work 16520 _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 97.83 _refine.ls_percent_reflns_R_free 4.78 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2504 _refine.ls_R_factor_R_free 0.2879 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.2485 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.33 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values 'GeoStd + Monomer Library + CDL v1.2' _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.1000 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.9000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 36.6417 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.4331 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.details ? _refine_hist.d_res_high 2.75 _refine_hist.d_res_low 47.09 _refine_hist.number_atoms_solvent 9 _refine_hist.number_atoms_total 4902 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total ? _refine_hist.pdbx_B_iso_mean_ligand ? _refine_hist.pdbx_B_iso_mean_solvent ? _refine_hist.pdbx_number_atoms_protein 134 _refine_hist.pdbx_number_atoms_nucleic_acid 4756 _refine_hist.pdbx_number_atoms_ligand 3 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.0018 ? 5439 ? f_bond_d ? ? 'X-RAY DIFFRACTION' ? 0.5566 ? 8431 ? f_angle_d ? ? 'X-RAY DIFFRACTION' ? 0.0243 ? 1120 ? f_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.0037 ? 244 ? f_plane_restr ? ? 'X-RAY DIFFRACTION' ? 22.3828 ? 3274 ? f_dihedral_angle_d ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_R_complete _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free _refine_ls_shell.R_factor_R_free 'X-RAY DIFFRACTION' 2.75 2.92 . . 146 2728 98.86 . . . . 0.3920 . . . . . . . . . . . 0.4361 'X-RAY DIFFRACTION' 2.92 3.15 . . 132 2704 97.32 . . . . 0.3449 . . . . . . . . . . . 0.4176 'X-RAY DIFFRACTION' 3.15 3.46 . . 150 2679 96.52 . . . . 0.2813 . . . . . . . . . . . 0.3409 'X-RAY DIFFRACTION' 3.46 3.96 . . 129 2711 96.63 . . . . 0.2341 . . . . . . . . . . . 0.2771 'X-RAY DIFFRACTION' 3.96 4.99 . . 134 2841 99.56 . . . . 0.2096 . . . . . . . . . . . 0.2510 'X-RAY DIFFRACTION' 4.99 47.09 . . 138 2857 98.04 . . . . 0.2007 . . . . . . . . . . . 0.2048 # _struct.entry_id 9DE5 _struct.title 'Structure of full-length HIV TAR RNA bound to HIV Tat RNA-binding domain' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 9DE5 _struct_keywords.text 'viral RNA, HIV RNA, TAR RNA, RNA-protein complex, HIV tat, RNA binding protein, RNA, RNA-TRANSCRIPTION complex' _struct_keywords.pdbx_keywords RNA/TRANSCRIPTION # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 1 ? D N N 1 ? E N N 2 ? F N N 3 ? G N N 3 ? H N N 3 ? I N N 4 ? J N N 4 ? K N N 4 ? L N N 4 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 GB MW061005.1 1945658931 ? 1 GGUCUCUCUGGUUAGACCAGAUCUGAGCCUGAAAGCUCUCUGGCUAACUAGGGAACC 5187 2 UNP TAT_HV1C4 P05907 ? 2 GISYGRKKRRQRRRAHQ 44 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 9DE5 C 1 ? 57 ? 1945658931 5187 ? 5243 ? 2 58 2 1 9DE5 E 1 ? 57 ? 1945658931 5187 ? 5243 ? 2 58 3 1 9DE5 B 1 ? 57 ? 1945658931 5187 ? 5243 ? 2 58 4 1 9DE5 D 1 ? 57 ? 1945658931 5187 ? 5243 ? 2 58 5 2 9DE5 A 1 ? 17 ? P05907 44 ? 60 ? 44 60 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 9DE5 G C 30 ? GB 1945658931 U 5216 'engineered mutation' 31 1 1 9DE5 A C 31 ? GB 1945658931 G 5217 'engineered mutation' 32 2 2 9DE5 G E 30 ? GB 1945658931 U 5216 'engineered mutation' 31 3 2 9DE5 A E 31 ? GB 1945658931 G 5217 'engineered mutation' 32 4 3 9DE5 G B 30 ? GB 1945658931 U 5216 'engineered mutation' 31 5 3 9DE5 A B 31 ? GB 1945658931 G 5217 'engineered mutation' 32 6 4 9DE5 G D 30 ? GB 1945658931 U 5216 'engineered mutation' 31 7 4 9DE5 A D 31 ? GB 1945658931 G 5217 'engineered mutation' 32 8 # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_defined_assembly ? dimeric 2 2 author_defined_assembly ? monomeric 1 3 author_defined_assembly ? monomeric 1 4 author_defined_assembly ? monomeric 1 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 C,E,K 2 1 A,F,I 3 1 B,G,J 4 1 D,H,L # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'native gel electrophoresis' _pdbx_struct_assembly_auth_evidence.details ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_conf.conf_type_id HELX_P _struct_conf.id HELX_P1 _struct_conf.pdbx_PDB_helix_id AA1 _struct_conf.beg_label_comp_id SER _struct_conf.beg_label_asym_id E _struct_conf.beg_label_seq_id 3 _struct_conf.pdbx_beg_PDB_ins_code ? _struct_conf.end_label_comp_id HIS _struct_conf.end_label_asym_id E _struct_conf.end_label_seq_id 16 _struct_conf.pdbx_end_PDB_ins_code ? _struct_conf.beg_auth_comp_id SER _struct_conf.beg_auth_asym_id A _struct_conf.beg_auth_seq_id 46 _struct_conf.end_auth_comp_id HIS _struct_conf.end_auth_asym_id A _struct_conf.end_auth_seq_id 59 _struct_conf.pdbx_PDB_helix_class 1 _struct_conf.details ? _struct_conf.pdbx_PDB_helix_length 14 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A GTP 1 "O3'" ? ? ? 1_555 A G 2 P ? ? C GTP 2 C G 3 1_555 ? ? ? ? ? ? ? 1.560 ? ? covale2 covale both ? B GTP 1 "O3'" ? ? ? 1_555 B G 2 P ? ? E GTP 2 E G 3 1_555 ? ? ? ? ? ? ? 1.559 ? ? covale3 covale both ? C GTP 1 "O3'" ? ? ? 1_555 C G 2 P ? ? B GTP 2 B G 3 1_555 ? ? ? ? ? ? ? 1.558 ? ? covale4 covale both ? D GTP 1 "O3'" ? ? ? 1_555 D G 2 P ? ? D GTP 2 D G 3 1_555 ? ? ? ? ? ? ? 1.558 ? ? metalc1 metalc ? ? A U 7 O4 ? ? ? 1_555 F K . K ? ? C U 8 C K 101 1_555 ? ? ? ? ? ? ? 3.253 ? ? metalc2 metalc ? ? A G 51 O6 ? ? ? 1_555 F K . K ? ? C G 52 C K 101 1_555 ? ? ? ? ? ? ? 2.895 ? ? metalc3 metalc ? ? A G 52 O6 ? ? ? 1_555 F K . K ? ? C G 53 C K 101 1_555 ? ? ? ? ? ? ? 3.003 ? ? metalc4 metalc ? ? A G 53 O6 ? ? ? 1_555 F K . K ? ? C G 54 C K 101 1_555 ? ? ? ? ? ? ? 3.066 ? ? metalc5 metalc ? ? B U 7 O4 ? ? ? 1_555 G K . K ? ? E U 8 E K 101 1_555 ? ? ? ? ? ? ? 3.201 ? ? metalc6 metalc ? ? B G 51 O6 ? ? ? 1_555 G K . K ? ? E G 52 E K 101 1_555 ? ? ? ? ? ? ? 3.391 ? ? metalc7 metalc ? ? B G 52 O6 ? ? ? 1_555 G K . K ? ? E G 53 E K 101 1_555 ? ? ? ? ? ? ? 3.092 ? ? metalc8 metalc ? ? B G 53 O6 ? ? ? 1_555 G K . K ? ? E G 54 E K 101 1_555 ? ? ? ? ? ? ? 3.146 ? ? metalc9 metalc ? ? D C 4 O2 ? ? ? 1_555 H K . K ? ? D C 5 D K 101 1_555 ? ? ? ? ? ? ? 3.435 ? ? metalc10 metalc ? ? D U 7 O4 ? ? ? 1_555 H K . K ? ? D U 8 D K 101 1_555 ? ? ? ? ? ? ? 3.152 ? ? metalc11 metalc ? ? D G 51 O6 ? ? ? 1_555 H K . K ? ? D G 52 D K 101 1_555 ? ? ? ? ? ? ? 2.840 ? ? metalc12 metalc ? ? D G 52 O6 ? ? ? 1_555 H K . K ? ? D G 53 D K 101 1_555 ? ? ? ? ? ? ? 2.871 ? ? metalc13 metalc ? ? D G 53 O6 ? ? ? 1_555 H K . K ? ? D G 54 D K 101 1_555 ? ? ? ? ? ? ? 2.741 ? ? hydrog1 hydrog ? ? C GTP 1 N1 ? ? ? 1_555 C C 57 N3 ? ? B GTP 2 B C 58 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? C GTP 1 N2 ? ? ? 1_555 C C 57 O2 ? ? B GTP 2 B C 58 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? C GTP 1 O6 ? ? ? 1_555 C C 57 N4 ? ? B GTP 2 B C 58 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? C G 2 N1 ? ? ? 1_555 C C 56 N3 ? ? B G 3 B C 57 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? C G 2 N2 ? ? ? 1_555 C C 56 O2 ? ? B G 3 B C 57 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? C G 2 O6 ? ? ? 1_555 C C 56 N4 ? ? B G 3 B C 57 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? C U 3 N3 ? ? ? 1_555 C A 55 N1 ? ? B U 4 B A 56 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? C U 3 O4 ? ? ? 1_555 C A 55 N6 ? ? B U 4 B A 56 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? C C 4 N4 ? ? ? 1_555 C G 51 N7 ? ? B C 5 B G 52 1_555 ? ? ? ? ? ? 'C-G PAIR' ? ? ? hydrog10 hydrog ? ? C U 5 N3 ? ? ? 1_555 C A 54 N1 ? ? B U 6 B A 55 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? C U 5 O4 ? ? ? 1_555 C A 54 N6 ? ? B U 6 B A 55 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? C C 6 N3 ? ? ? 1_555 C G 53 N1 ? ? B C 7 B G 54 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? C C 6 N4 ? ? ? 1_555 C G 53 O6 ? ? B C 7 B G 54 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? C C 6 O2 ? ? ? 1_555 C G 53 N2 ? ? B C 7 B G 54 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? C U 7 N3 ? ? ? 1_555 C G 52 O6 ? ? B U 8 B G 53 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog16 hydrog ? ? C U 7 O2 ? ? ? 1_555 C G 52 N1 ? ? B U 8 B G 53 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog17 hydrog ? ? C C 8 N3 ? ? ? 1_555 C G 51 N1 ? ? B C 9 B G 52 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? C C 8 N4 ? ? ? 1_555 C G 51 O6 ? ? B C 9 B G 52 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? C C 8 O2 ? ? ? 1_555 C G 51 N2 ? ? B C 9 B G 52 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? C U 9 N3 ? ? ? 1_555 C A 50 N1 ? ? B U 10 B A 51 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? C U 9 O4 ? ? ? 1_555 C A 50 N6 ? ? B U 10 B A 51 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? C G 10 N1 ? ? ? 1_555 C U 49 O2 ? ? B G 11 B U 50 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog23 hydrog ? ? C G 10 O6 ? ? ? 1_555 C U 49 N3 ? ? B G 11 B U 50 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog24 hydrog ? ? C G 11 N1 ? ? ? 1_555 C C 48 N3 ? ? B G 12 B C 49 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? C G 11 N2 ? ? ? 1_555 C C 48 O2 ? ? B G 12 B C 49 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? C G 11 O6 ? ? ? 1_555 C C 48 N4 ? ? B G 12 B C 49 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? C U 12 N3 ? ? ? 1_555 C A 47 N1 ? ? B U 13 B A 48 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? C U 12 O4 ? ? ? 1_555 C A 47 N6 ? ? B U 13 B A 48 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? C U 13 N3 ? ? ? 1_555 C A 46 N1 ? ? B U 14 B A 47 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? C U 13 O4 ? ? ? 1_555 C A 46 N6 ? ? B U 14 B A 47 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? C A 14 N1 ? ? ? 1_555 C U 45 N3 ? ? B A 15 B U 46 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? C A 14 N6 ? ? ? 1_555 C U 45 O4 ? ? B A 15 B U 46 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? C G 15 N1 ? ? ? 1_555 C C 44 N3 ? ? B G 16 B C 45 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? C G 15 N2 ? ? ? 1_555 C C 44 O2 ? ? B G 16 B C 45 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? C G 15 O6 ? ? ? 1_555 C C 44 N4 ? ? B G 16 B C 45 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? C C 17 N3 ? ? ? 1_555 C G 43 N1 ? ? B C 18 B G 44 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? C C 17 N4 ? ? ? 1_555 C G 43 O6 ? ? B C 18 B G 44 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? C C 17 O2 ? ? ? 1_555 C G 43 N2 ? ? B C 18 B G 44 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? C C 18 N3 ? ? ? 1_555 C G 42 N1 ? ? B C 19 B G 43 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog40 hydrog ? ? C C 18 N4 ? ? ? 1_555 C G 42 O6 ? ? B C 19 B G 43 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog41 hydrog ? ? C C 18 O2 ? ? ? 1_555 C G 42 N2 ? ? B C 19 B G 43 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog42 hydrog ? ? C A 19 N1 ? ? ? 1_555 C U 41 N3 ? ? B A 20 B U 42 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog43 hydrog ? ? C A 19 N6 ? ? ? 1_555 C U 41 O4 ? ? B A 20 B U 42 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog44 hydrog ? ? C G 20 N1 ? ? ? 1_555 C C 40 N3 ? ? B G 21 B C 41 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog45 hydrog ? ? C G 20 N2 ? ? ? 1_555 C C 40 O2 ? ? B G 21 B C 41 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog46 hydrog ? ? C G 20 O6 ? ? ? 1_555 C C 40 N4 ? ? B G 21 B C 41 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog47 hydrog ? ? C A 21 N1 ? ? ? 1_555 C U 39 N3 ? ? B A 22 B U 40 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog48 hydrog ? ? C A 21 N6 ? ? ? 1_555 C U 39 O4 ? ? B A 22 B U 40 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog49 hydrog ? ? C U 22 N3 ? ? ? 1_555 C A 26 N7 ? ? B U 23 B A 27 1_555 ? ? ? ? ? ? HOOGSTEEN ? ? ? hydrog50 hydrog ? ? C U 22 O4 ? ? ? 1_555 C A 26 N6 ? ? B U 23 B A 27 1_555 ? ? ? ? ? ? HOOGSTEEN ? ? ? hydrog51 hydrog ? ? C G 25 N1 ? ? ? 1_555 C C 38 N3 ? ? B G 26 B C 39 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog52 hydrog ? ? C G 25 N2 ? ? ? 1_555 C C 38 O2 ? ? B G 26 B C 39 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog53 hydrog ? ? C G 25 O6 ? ? ? 1_555 C C 38 N4 ? ? B G 26 B C 39 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog54 hydrog ? ? C A 26 N1 ? ? ? 1_555 C U 37 N3 ? ? B A 27 B U 38 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog55 hydrog ? ? C A 26 N6 ? ? ? 1_555 C U 37 O4 ? ? B A 27 B U 38 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog56 hydrog ? ? C G 27 N1 ? ? ? 1_555 C C 36 N3 ? ? B G 28 B C 37 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog57 hydrog ? ? C G 27 N2 ? ? ? 1_555 C C 36 O2 ? ? B G 28 B C 37 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog58 hydrog ? ? C G 27 O6 ? ? ? 1_555 C C 36 N4 ? ? B G 28 B C 37 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog59 hydrog ? ? C C 28 N3 ? ? ? 1_555 C G 35 N1 ? ? B C 29 B G 36 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog60 hydrog ? ? C C 28 N4 ? ? ? 1_555 C G 35 O6 ? ? B C 29 B G 36 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog61 hydrog ? ? C C 28 O2 ? ? ? 1_555 C G 35 N2 ? ? B C 29 B G 36 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog62 hydrog ? ? C C 29 N3 ? ? ? 1_555 C A 34 N6 ? ? B C 30 B A 35 1_555 ? ? ? ? ? ? 'C-A MISPAIR' ? ? ? hydrog63 hydrog ? ? C G 30 N2 ? ? ? 1_555 C A 33 N7 ? ? B G 31 B A 34 1_555 ? ? ? ? ? ? 'G-A MISPAIR' ? ? ? hydrog64 hydrog ? ? A GTP 1 N1 ? ? ? 1_555 A C 57 N3 ? ? C GTP 2 C C 58 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog65 hydrog ? ? A GTP 1 N2 ? ? ? 1_555 A C 57 O2 ? ? C GTP 2 C C 58 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog66 hydrog ? ? A GTP 1 O6 ? ? ? 1_555 A C 57 N4 ? ? C GTP 2 C C 58 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog67 hydrog ? ? A G 2 N1 ? ? ? 1_555 A C 56 N3 ? ? C G 3 C C 57 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog68 hydrog ? ? A G 2 N2 ? ? ? 1_555 A C 56 O2 ? ? C G 3 C C 57 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog69 hydrog ? ? A G 2 O6 ? ? ? 1_555 A C 56 N4 ? ? C G 3 C C 57 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog70 hydrog ? ? A U 3 N3 ? ? ? 1_555 A A 55 N1 ? ? C U 4 C A 56 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog71 hydrog ? ? A U 3 O4 ? ? ? 1_555 A A 55 N6 ? ? C U 4 C A 56 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog72 hydrog ? ? A C 4 N4 ? ? ? 1_555 A C 56 O2 ? ? C C 5 C C 57 1_555 ? ? ? ? ? ? 'C-C MISPAIR' ? ? ? hydrog73 hydrog ? ? A U 5 N3 ? ? ? 1_555 A A 54 N1 ? ? C U 6 C A 55 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog74 hydrog ? ? A U 5 O4 ? ? ? 1_555 A A 54 N6 ? ? C U 6 C A 55 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog75 hydrog ? ? A C 6 N3 ? ? ? 1_555 A G 53 N1 ? ? C C 7 C G 54 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog76 hydrog ? ? A C 6 N4 ? ? ? 1_555 A G 53 O6 ? ? C C 7 C G 54 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog77 hydrog ? ? A C 6 O2 ? ? ? 1_555 A G 53 N2 ? ? C C 7 C G 54 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog78 hydrog ? ? A U 7 N3 ? ? ? 1_555 A G 52 O6 ? ? C U 8 C G 53 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog79 hydrog ? ? A U 7 O2 ? ? ? 1_555 A G 52 N1 ? ? C U 8 C G 53 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog80 hydrog ? ? A C 8 N3 ? ? ? 1_555 A G 51 N1 ? ? C C 9 C G 52 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog81 hydrog ? ? A C 8 N4 ? ? ? 1_555 A G 51 O6 ? ? C C 9 C G 52 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog82 hydrog ? ? A C 8 O2 ? ? ? 1_555 A G 51 N2 ? ? C C 9 C G 52 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog83 hydrog ? ? A U 9 N3 ? ? ? 1_555 A A 50 N1 ? ? C U 10 C A 51 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog84 hydrog ? ? A U 9 O4 ? ? ? 1_555 A A 50 N6 ? ? C U 10 C A 51 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog85 hydrog ? ? A G 10 N1 ? ? ? 1_555 A U 49 O2 ? ? C G 11 C U 50 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog86 hydrog ? ? A G 10 O6 ? ? ? 1_555 A U 49 N3 ? ? C G 11 C U 50 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog87 hydrog ? ? A G 11 N1 ? ? ? 1_555 A C 48 N3 ? ? C G 12 C C 49 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog88 hydrog ? ? A G 11 N2 ? ? ? 1_555 A C 48 O2 ? ? C G 12 C C 49 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog89 hydrog ? ? A G 11 O6 ? ? ? 1_555 A C 48 N4 ? ? C G 12 C C 49 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog90 hydrog ? ? A U 12 N3 ? ? ? 1_555 A A 47 N1 ? ? C U 13 C A 48 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog91 hydrog ? ? A U 12 O4 ? ? ? 1_555 A A 47 N6 ? ? C U 13 C A 48 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog92 hydrog ? ? A U 13 N3 ? ? ? 1_555 A A 46 N1 ? ? C U 14 C A 47 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog93 hydrog ? ? A U 13 O4 ? ? ? 1_555 A A 46 N6 ? ? C U 14 C A 47 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog94 hydrog ? ? A A 14 N1 ? ? ? 1_555 A U 45 N3 ? ? C A 15 C U 46 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog95 hydrog ? ? A A 14 N6 ? ? ? 1_555 A U 45 O4 ? ? C A 15 C U 46 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog96 hydrog ? ? A G 15 N1 ? ? ? 1_555 A C 44 N3 ? ? C G 16 C C 45 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog97 hydrog ? ? A G 15 N2 ? ? ? 1_555 A C 44 O2 ? ? C G 16 C C 45 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog98 hydrog ? ? A G 15 O6 ? ? ? 1_555 A C 44 N4 ? ? C G 16 C C 45 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog99 hydrog ? ? A C 17 N3 ? ? ? 1_555 A G 43 N1 ? ? C C 18 C G 44 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog100 hydrog ? ? A C 17 N4 ? ? ? 1_555 A G 43 O6 ? ? C C 18 C G 44 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog101 hydrog ? ? A C 17 O2 ? ? ? 1_555 A G 43 N2 ? ? C C 18 C G 44 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog102 hydrog ? ? A C 18 N3 ? ? ? 1_555 A G 42 N1 ? ? C C 19 C G 43 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog103 hydrog ? ? A C 18 N4 ? ? ? 1_555 A G 42 O6 ? ? C C 19 C G 43 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog104 hydrog ? ? A C 18 O2 ? ? ? 1_555 A G 42 N2 ? ? C C 19 C G 43 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog105 hydrog ? ? A A 19 N1 ? ? ? 1_555 A U 41 N3 ? ? C A 20 C U 42 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog106 hydrog ? ? A A 19 N6 ? ? ? 1_555 A U 41 O4 ? ? C A 20 C U 42 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog107 hydrog ? ? A G 20 N1 ? ? ? 1_555 A C 40 N3 ? ? C G 21 C C 41 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog108 hydrog ? ? A G 20 N2 ? ? ? 1_555 A C 40 O2 ? ? C G 21 C C 41 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog109 hydrog ? ? A G 20 O6 ? ? ? 1_555 A C 40 N4 ? ? C G 21 C C 41 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog110 hydrog ? ? A A 21 N1 ? ? ? 1_555 A U 39 N3 ? ? C A 22 C U 40 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog111 hydrog ? ? A A 21 N6 ? ? ? 1_555 A U 39 O4 ? ? C A 22 C U 40 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog112 hydrog ? ? A G 25 N1 ? ? ? 1_555 A C 38 N3 ? ? C G 26 C C 39 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog113 hydrog ? ? A G 25 N2 ? ? ? 1_555 A C 38 O2 ? ? C G 26 C C 39 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog114 hydrog ? ? A G 25 O6 ? ? ? 1_555 A C 38 N4 ? ? C G 26 C C 39 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog115 hydrog ? ? A A 26 N1 ? ? ? 1_555 A U 37 N3 ? ? C A 27 C U 38 1_555 ? ? ? ? ? ? 'A-U PAIR' ? ? ? hydrog116 hydrog ? ? A G 27 N1 ? ? ? 1_555 A C 36 N3 ? ? C G 28 C C 37 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog117 hydrog ? ? A G 27 N2 ? ? ? 1_555 A C 36 O2 ? ? C G 28 C C 37 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog118 hydrog ? ? A G 27 O6 ? ? ? 1_555 A C 36 N4 ? ? C G 28 C C 37 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog119 hydrog ? ? A C 28 N4 ? ? ? 1_555 A G 35 O6 ? ? C C 29 C G 36 1_555 ? ? ? ? ? ? 'C-G PAIR' ? ? ? hydrog120 hydrog ? ? A C 29 O2 ? ? ? 1_555 A A 34 N6 ? ? C C 30 C A 35 1_555 ? ? ? ? ? ? 'C-A MISPAIR' ? ? ? hydrog121 hydrog ? ? A G 30 N2 ? ? ? 1_555 A A 33 N7 ? ? C G 31 C A 34 1_555 ? ? ? ? ? ? 'G-A MISPAIR' ? ? ? hydrog122 hydrog ? ? D GTP 1 N1 ? ? ? 1_555 D C 57 N3 ? ? D GTP 2 D C 58 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog123 hydrog ? ? D GTP 1 N2 ? ? ? 1_555 D C 57 O2 ? ? D GTP 2 D C 58 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog124 hydrog ? ? D GTP 1 O6 ? ? ? 1_555 D C 57 N4 ? ? D GTP 2 D C 58 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog125 hydrog ? ? D G 2 N1 ? ? ? 1_555 D C 56 N3 ? ? D G 3 D C 57 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog126 hydrog ? ? D G 2 N2 ? ? ? 1_555 D C 56 O2 ? ? D G 3 D C 57 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog127 hydrog ? ? D G 2 O6 ? ? ? 1_555 D C 56 N4 ? ? D G 3 D C 57 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog128 hydrog ? ? D U 3 N3 ? ? ? 1_555 D A 55 N1 ? ? D U 4 D A 56 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog129 hydrog ? ? D U 3 O4 ? ? ? 1_555 D A 55 N6 ? ? D U 4 D A 56 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog130 hydrog ? ? D C 4 N4 ? ? ? 1_555 D G 51 N7 ? ? D C 5 D G 52 1_555 ? ? ? ? ? ? 'C-G PAIR' ? ? ? hydrog131 hydrog ? ? D U 5 N3 ? ? ? 1_555 D A 54 N1 ? ? D U 6 D A 55 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog132 hydrog ? ? D U 5 O4 ? ? ? 1_555 D A 54 N6 ? ? D U 6 D A 55 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog133 hydrog ? ? D C 6 N3 ? ? ? 1_555 D G 53 N1 ? ? D C 7 D G 54 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog134 hydrog ? ? D C 6 N4 ? ? ? 1_555 D G 53 O6 ? ? D C 7 D G 54 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog135 hydrog ? ? D C 6 O2 ? ? ? 1_555 D G 53 N2 ? ? D C 7 D G 54 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog136 hydrog ? ? D U 7 N3 ? ? ? 1_555 D G 52 O6 ? ? D U 8 D G 53 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog137 hydrog ? ? D U 7 O2 ? ? ? 1_555 D G 52 N1 ? ? D U 8 D G 53 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog138 hydrog ? ? D C 8 N3 ? ? ? 1_555 D G 51 N1 ? ? D C 9 D G 52 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog139 hydrog ? ? D C 8 N4 ? ? ? 1_555 D G 51 O6 ? ? D C 9 D G 52 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog140 hydrog ? ? D C 8 O2 ? ? ? 1_555 D G 51 N2 ? ? D C 9 D G 52 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog141 hydrog ? ? D U 9 N3 ? ? ? 1_555 D A 50 N1 ? ? D U 10 D A 51 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog142 hydrog ? ? D U 9 O4 ? ? ? 1_555 D A 50 N6 ? ? D U 10 D A 51 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog143 hydrog ? ? D G 10 N1 ? ? ? 1_555 D U 49 O2 ? ? D G 11 D U 50 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog144 hydrog ? ? D G 10 O6 ? ? ? 1_555 D U 49 N3 ? ? D G 11 D U 50 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog145 hydrog ? ? D G 11 N2 ? ? ? 1_555 D C 48 O2 ? ? D G 12 D C 49 1_555 ? ? ? ? ? ? 'G-C PAIR' ? ? ? hydrog146 hydrog ? ? D U 12 N3 ? ? ? 1_555 D A 47 N1 ? ? D U 13 D A 48 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog147 hydrog ? ? D U 12 O4 ? ? ? 1_555 D A 47 N6 ? ? D U 13 D A 48 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog148 hydrog ? ? D U 13 N3 ? ? ? 1_555 D A 46 N1 ? ? D U 14 D A 47 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog149 hydrog ? ? D U 13 O4 ? ? ? 1_555 D A 46 N6 ? ? D U 14 D A 47 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog150 hydrog ? ? D A 14 N1 ? ? ? 1_555 D U 45 N3 ? ? D A 15 D U 46 1_555 ? ? ? ? ? ? 'A-U PAIR' ? ? ? hydrog151 hydrog ? ? D G 15 N1 ? ? ? 1_555 D C 44 N3 ? ? D G 16 D C 45 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog152 hydrog ? ? D G 15 N2 ? ? ? 1_555 D C 44 O2 ? ? D G 16 D C 45 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog153 hydrog ? ? D G 15 O6 ? ? ? 1_555 D C 44 N4 ? ? D G 16 D C 45 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog154 hydrog ? ? D C 17 N3 ? ? ? 1_555 D G 43 N1 ? ? D C 18 D G 44 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog155 hydrog ? ? D C 17 N4 ? ? ? 1_555 D G 43 O6 ? ? D C 18 D G 44 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog156 hydrog ? ? D C 17 O2 ? ? ? 1_555 D G 43 N2 ? ? D C 18 D G 44 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog157 hydrog ? ? D C 18 N3 ? ? ? 1_555 D G 42 N1 ? ? D C 19 D G 43 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog158 hydrog ? ? D C 18 N4 ? ? ? 1_555 D G 42 O6 ? ? D C 19 D G 43 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog159 hydrog ? ? D C 18 O2 ? ? ? 1_555 D G 42 N2 ? ? D C 19 D G 43 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog160 hydrog ? ? D A 19 N1 ? ? ? 1_555 D U 41 N3 ? ? D A 20 D U 42 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog161 hydrog ? ? D A 19 N6 ? ? ? 1_555 D U 41 O4 ? ? D A 20 D U 42 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog162 hydrog ? ? D G 20 N1 ? ? ? 1_555 D C 40 N3 ? ? D G 21 D C 41 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog163 hydrog ? ? D G 20 N2 ? ? ? 1_555 D C 40 O2 ? ? D G 21 D C 41 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog164 hydrog ? ? D G 20 O6 ? ? ? 1_555 D C 40 N4 ? ? D G 21 D C 41 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog165 hydrog ? ? D A 21 N1 ? ? ? 1_555 D U 39 N3 ? ? D A 22 D U 40 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog166 hydrog ? ? D A 21 N6 ? ? ? 1_555 D U 39 O4 ? ? D A 22 D U 40 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog167 hydrog ? ? D G 25 N1 ? ? ? 1_555 D C 38 N3 ? ? D G 26 D C 39 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog168 hydrog ? ? D G 25 N2 ? ? ? 1_555 D C 38 O2 ? ? D G 26 D C 39 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog169 hydrog ? ? D G 25 O6 ? ? ? 1_555 D C 38 N4 ? ? D G 26 D C 39 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog170 hydrog ? ? D A 26 N1 ? ? ? 1_555 D U 37 N3 ? ? D A 27 D U 38 1_555 ? ? ? ? ? ? 'A-U PAIR' ? ? ? hydrog171 hydrog ? ? D G 27 N1 ? ? ? 1_555 D C 36 N3 ? ? D G 28 D C 37 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog172 hydrog ? ? D G 27 N2 ? ? ? 1_555 D C 36 O2 ? ? D G 28 D C 37 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog173 hydrog ? ? D G 27 O6 ? ? ? 1_555 D C 36 N4 ? ? D G 28 D C 37 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog174 hydrog ? ? D C 28 N3 ? ? ? 1_555 D G 35 N1 ? ? D C 29 D G 36 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog175 hydrog ? ? D C 28 N4 ? ? ? 1_555 D G 35 O6 ? ? D C 29 D G 36 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog176 hydrog ? ? D C 28 O2 ? ? ? 1_555 D G 35 N2 ? ? D C 29 D G 36 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog177 hydrog ? ? D C 29 N3 ? ? ? 1_555 D A 34 N6 ? ? D C 30 D A 35 1_555 ? ? ? ? ? ? 'C-A MISPAIR' ? ? ? hydrog178 hydrog ? ? D G 30 N2 ? ? ? 1_555 D A 33 N7 ? ? D G 31 D A 34 1_555 ? ? ? ? ? ? 'G-A MISPAIR' ? ? ? hydrog179 hydrog ? ? B GTP 1 N1 ? ? ? 1_555 B C 57 N3 ? ? E GTP 2 E C 58 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog180 hydrog ? ? B GTP 1 N2 ? ? ? 1_555 B C 57 O2 ? ? E GTP 2 E C 58 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog181 hydrog ? ? B GTP 1 O6 ? ? ? 1_555 B C 57 N4 ? ? E GTP 2 E C 58 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog182 hydrog ? ? B G 2 N1 ? ? ? 1_555 B C 56 N3 ? ? E G 3 E C 57 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog183 hydrog ? ? B G 2 N2 ? ? ? 1_555 B C 56 O2 ? ? E G 3 E C 57 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog184 hydrog ? ? B G 2 O6 ? ? ? 1_555 B C 56 N4 ? ? E G 3 E C 57 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog185 hydrog ? ? B U 3 N3 ? ? ? 1_555 B A 55 N1 ? ? E U 4 E A 56 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog186 hydrog ? ? B U 3 O4 ? ? ? 1_555 B A 55 N6 ? ? E U 4 E A 56 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog187 hydrog ? ? B C 4 N4 ? ? ? 1_555 B C 56 O2 ? ? E C 5 E C 57 1_555 ? ? ? ? ? ? 'C-C MISPAIR' ? ? ? hydrog188 hydrog ? ? B U 5 N3 ? ? ? 1_555 B A 54 N1 ? ? E U 6 E A 55 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog189 hydrog ? ? B U 5 O4 ? ? ? 1_555 B A 54 N6 ? ? E U 6 E A 55 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog190 hydrog ? ? B C 6 N3 ? ? ? 1_555 B G 53 N1 ? ? E C 7 E G 54 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog191 hydrog ? ? B C 6 N4 ? ? ? 1_555 B G 53 O6 ? ? E C 7 E G 54 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog192 hydrog ? ? B C 6 O2 ? ? ? 1_555 B G 53 N2 ? ? E C 7 E G 54 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog193 hydrog ? ? B U 7 N3 ? ? ? 1_555 B G 52 O6 ? ? E U 8 E G 53 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog194 hydrog ? ? B U 7 O2 ? ? ? 1_555 B G 52 N1 ? ? E U 8 E G 53 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog195 hydrog ? ? B C 8 N3 ? ? ? 1_555 B G 51 N1 ? ? E C 9 E G 52 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog196 hydrog ? ? B C 8 N4 ? ? ? 1_555 B G 51 O6 ? ? E C 9 E G 52 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog197 hydrog ? ? B C 8 O2 ? ? ? 1_555 B G 51 N2 ? ? E C 9 E G 52 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog198 hydrog ? ? B U 9 N3 ? ? ? 1_555 B A 50 N1 ? ? E U 10 E A 51 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog199 hydrog ? ? B U 9 O4 ? ? ? 1_555 B A 50 N6 ? ? E U 10 E A 51 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog200 hydrog ? ? B G 10 N1 ? ? ? 1_555 B U 49 O2 ? ? E G 11 E U 50 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog201 hydrog ? ? B G 10 O6 ? ? ? 1_555 B U 49 N3 ? ? E G 11 E U 50 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog202 hydrog ? ? B G 11 N1 ? ? ? 1_555 B C 48 N3 ? ? E G 12 E C 49 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog203 hydrog ? ? B G 11 N2 ? ? ? 1_555 B C 48 O2 ? ? E G 12 E C 49 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog204 hydrog ? ? B G 11 O6 ? ? ? 1_555 B C 48 N4 ? ? E G 12 E C 49 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog205 hydrog ? ? B U 12 N3 ? ? ? 1_555 B A 47 N1 ? ? E U 13 E A 48 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog206 hydrog ? ? B U 12 O4 ? ? ? 1_555 B A 47 N6 ? ? E U 13 E A 48 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog207 hydrog ? ? B U 13 N3 ? ? ? 1_555 B A 46 N1 ? ? E U 14 E A 47 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog208 hydrog ? ? B U 13 O4 ? ? ? 1_555 B A 46 N6 ? ? E U 14 E A 47 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog209 hydrog ? ? B A 14 N1 ? ? ? 1_555 B U 45 N3 ? ? E A 15 E U 46 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog210 hydrog ? ? B A 14 N6 ? ? ? 1_555 B U 45 O4 ? ? E A 15 E U 46 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog211 hydrog ? ? B G 15 N1 ? ? ? 1_555 B C 44 N3 ? ? E G 16 E C 45 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog212 hydrog ? ? B G 15 N2 ? ? ? 1_555 B C 44 O2 ? ? E G 16 E C 45 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog213 hydrog ? ? B G 15 O6 ? ? ? 1_555 B C 44 N4 ? ? E G 16 E C 45 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog214 hydrog ? ? B C 17 N3 ? ? ? 1_555 B G 43 N1 ? ? E C 18 E G 44 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog215 hydrog ? ? B C 17 N4 ? ? ? 1_555 B G 43 O6 ? ? E C 18 E G 44 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog216 hydrog ? ? B C 17 O2 ? ? ? 1_555 B G 43 N2 ? ? E C 18 E G 44 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog217 hydrog ? ? B C 18 N3 ? ? ? 1_555 B G 42 N1 ? ? E C 19 E G 43 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog218 hydrog ? ? B C 18 N4 ? ? ? 1_555 B G 42 O6 ? ? E C 19 E G 43 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog219 hydrog ? ? B C 18 O2 ? ? ? 1_555 B G 42 N2 ? ? E C 19 E G 43 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog220 hydrog ? ? B A 19 N1 ? ? ? 1_555 B U 41 N3 ? ? E A 20 E U 42 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog221 hydrog ? ? B A 19 N6 ? ? ? 1_555 B U 41 O4 ? ? E A 20 E U 42 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog222 hydrog ? ? B G 20 N1 ? ? ? 1_555 B C 40 N3 ? ? E G 21 E C 41 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog223 hydrog ? ? B G 20 N2 ? ? ? 1_555 B C 40 O2 ? ? E G 21 E C 41 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog224 hydrog ? ? B G 20 O6 ? ? ? 1_555 B C 40 N4 ? ? E G 21 E C 41 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog225 hydrog ? ? B A 21 N6 ? ? ? 1_555 B U 39 O2 ? ? E A 22 E U 40 1_555 ? ? ? ? ? ? 'A-U PAIR' ? ? ? hydrog226 hydrog ? ? B G 25 N1 ? ? ? 1_555 B C 38 N3 ? ? E G 26 E C 39 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog227 hydrog ? ? B G 25 N2 ? ? ? 1_555 B C 38 O2 ? ? E G 26 E C 39 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog228 hydrog ? ? B G 25 O6 ? ? ? 1_555 B C 38 N4 ? ? E G 26 E C 39 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog229 hydrog ? ? B A 26 N1 ? ? ? 1_555 B U 37 N3 ? ? E A 27 E U 38 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog230 hydrog ? ? B A 26 N6 ? ? ? 1_555 B U 37 O4 ? ? E A 27 E U 38 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog231 hydrog ? ? B G 27 N1 ? ? ? 1_555 B C 36 N3 ? ? E G 28 E C 37 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog232 hydrog ? ? B G 27 N2 ? ? ? 1_555 B C 36 O2 ? ? E G 28 E C 37 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog233 hydrog ? ? B G 27 O6 ? ? ? 1_555 B C 36 N4 ? ? E G 28 E C 37 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog234 hydrog ? ? B C 28 N3 ? ? ? 1_555 B G 35 N1 ? ? E C 29 E G 36 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog235 hydrog ? ? B C 28 N4 ? ? ? 1_555 B G 35 O6 ? ? E C 29 E G 36 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog236 hydrog ? ? B C 28 O2 ? ? ? 1_555 B G 35 N2 ? ? E C 29 E G 36 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog237 hydrog ? ? B C 29 O2 ? ? ? 1_555 B A 34 N6 ? ? E C 30 E A 35 1_555 ? ? ? ? ? ? 'C-A MISPAIR' ? ? ? hydrog238 hydrog ? ? B G 30 N2 ? ? ? 1_555 B A 33 N7 ? ? E G 31 E A 34 1_555 ? ? ? ? ? ? 'G-A MISPAIR' ? ? ? hydrog239 hydrog ? ? B A 31 N6 ? ? ? 1_555 C A 19 N3 ? ? E A 32 B A 20 1_555 ? ? ? ? ? ? 'A-A MISPAIR' ? ? ? hydrog240 hydrog ? ? B A 32 N1 ? ? ? 1_555 C G 42 N2 ? ? E A 33 B G 43 1_555 ? ? ? ? ? ? TYPE_10_PAIR ? ? ? hydrog241 hydrog ? ? B A 32 N6 ? ? ? 1_555 C G 42 N3 ? ? E A 33 B G 43 1_555 ? ? ? ? ? ? TYPE_10_PAIR ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? hydrog ? ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 O4 ? A U 7 ? C U 8 ? 1_555 K ? F K . ? C K 101 ? 1_555 O6 ? A G 51 ? C G 52 ? 1_555 81.4 ? 2 O4 ? A U 7 ? C U 8 ? 1_555 K ? F K . ? C K 101 ? 1_555 O6 ? A G 52 ? C G 53 ? 1_555 72.0 ? 3 O6 ? A G 51 ? C G 52 ? 1_555 K ? F K . ? C K 101 ? 1_555 O6 ? A G 52 ? C G 53 ? 1_555 83.1 ? 4 O4 ? A U 7 ? C U 8 ? 1_555 K ? F K . ? C K 101 ? 1_555 O6 ? A G 53 ? C G 54 ? 1_555 90.1 ? 5 O6 ? A G 51 ? C G 52 ? 1_555 K ? F K . ? C K 101 ? 1_555 O6 ? A G 53 ? C G 54 ? 1_555 145.2 ? 6 O6 ? A G 52 ? C G 53 ? 1_555 K ? F K . ? C K 101 ? 1_555 O6 ? A G 53 ? C G 54 ? 1_555 62.2 ? 7 O4 ? B U 7 ? E U 8 ? 1_555 K ? G K . ? E K 101 ? 1_555 O6 ? B G 51 ? E G 52 ? 1_555 78.1 ? 8 O4 ? B U 7 ? E U 8 ? 1_555 K ? G K . ? E K 101 ? 1_555 O6 ? B G 52 ? E G 53 ? 1_555 66.7 ? 9 O6 ? B G 51 ? E G 52 ? 1_555 K ? G K . ? E K 101 ? 1_555 O6 ? B G 52 ? E G 53 ? 1_555 55.4 ? 10 O4 ? B U 7 ? E U 8 ? 1_555 K ? G K . ? E K 101 ? 1_555 O6 ? B G 53 ? E G 54 ? 1_555 84.4 ? 11 O6 ? B G 51 ? E G 52 ? 1_555 K ? G K . ? E K 101 ? 1_555 O6 ? B G 53 ? E G 54 ? 1_555 117.9 ? 12 O6 ? B G 52 ? E G 53 ? 1_555 K ? G K . ? E K 101 ? 1_555 O6 ? B G 53 ? E G 54 ? 1_555 62.9 ? 13 O2 ? D C 4 ? D C 5 ? 1_555 K ? H K . ? D K 101 ? 1_555 O4 ? D U 7 ? D U 8 ? 1_555 60.1 ? 14 O2 ? D C 4 ? D C 5 ? 1_555 K ? H K . ? D K 101 ? 1_555 O6 ? D G 51 ? D G 52 ? 1_555 96.1 ? 15 O4 ? D U 7 ? D U 8 ? 1_555 K ? H K . ? D K 101 ? 1_555 O6 ? D G 51 ? D G 52 ? 1_555 70.9 ? 16 O2 ? D C 4 ? D C 5 ? 1_555 K ? H K . ? D K 101 ? 1_555 O6 ? D G 52 ? D G 53 ? 1_555 134.8 ? 17 O4 ? D U 7 ? D U 8 ? 1_555 K ? H K . ? D K 101 ? 1_555 O6 ? D G 52 ? D G 53 ? 1_555 74.8 ? 18 O6 ? D G 51 ? D G 52 ? 1_555 K ? H K . ? D K 101 ? 1_555 O6 ? D G 52 ? D G 53 ? 1_555 69.7 ? 19 O2 ? D C 4 ? D C 5 ? 1_555 K ? H K . ? D K 101 ? 1_555 O6 ? D G 53 ? D G 54 ? 1_555 106.0 ? 20 O4 ? D U 7 ? D U 8 ? 1_555 K ? H K . ? D K 101 ? 1_555 O6 ? D G 53 ? D G 54 ? 1_555 94.6 ? 21 O6 ? D G 51 ? D G 52 ? 1_555 K ? H K . ? D K 101 ? 1_555 O6 ? D G 53 ? D G 54 ? 1_555 142.9 ? 22 O6 ? D G 52 ? D G 53 ? 1_555 K ? H K . ? D K 101 ? 1_555 O6 ? D G 53 ? D G 54 ? 1_555 73.6 ? # _pdbx_entry_details.entry_id 9DE5 _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.has_ligand_of_interest N _pdbx_entry_details.has_protein_modification N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "C3'" C GTP 2 ? ? "O3'" C GTP 2 ? ? P C G 3 ? ? 107.18 119.70 -12.52 1.20 Y 2 1 "O3'" C GTP 2 ? ? P C G 3 ? ? OP2 C G 3 ? ? 121.35 110.50 10.85 1.10 Y 3 1 "O3'" C GTP 2 ? ? P C G 3 ? ? OP1 C G 3 ? ? 91.20 105.20 -14.00 2.20 Y 4 1 "C3'" E GTP 2 ? ? "O3'" E GTP 2 ? ? P E G 3 ? ? 112.22 119.70 -7.48 1.20 Y 5 1 "O3'" E GTP 2 ? ? P E G 3 ? ? OP2 E G 3 ? ? 122.11 110.50 11.61 1.10 Y # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A GTP 1 C GTP 2 ? G 'modified residue' 2 B GTP 1 E GTP 2 ? G 'modified residue' 3 C GTP 1 B GTP 2 ? G 'modified residue' 4 D GTP 1 D GTP 2 ? G 'modified residue' # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 C C 24 ? A C 23 2 1 Y 1 C U 25 ? A U 24 3 1 Y 1 D U 23 ? D U 22 4 1 Y 1 D C 24 ? D C 23 5 1 Y 1 D U 25 ? D U 24 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal A OP3 O N N 1 A P P N N 2 A OP1 O N N 3 A OP2 O N N 4 A "O5'" O N N 5 A "C5'" C N N 6 A "C4'" C N R 7 A "O4'" O N N 8 A "C3'" C N S 9 A "O3'" O N N 10 A "C2'" C N R 11 A "O2'" O N N 12 A "C1'" C N R 13 A N9 N Y N 14 A C8 C Y N 15 A N7 N Y N 16 A C5 C Y N 17 A C6 C Y N 18 A N6 N N N 19 A N1 N Y N 20 A C2 C Y N 21 A N3 N Y N 22 A C4 C Y N 23 A HOP3 H N N 24 A HOP2 H N N 25 A "H5'" H N N 26 A "H5''" H N N 27 A "H4'" H N N 28 A "H3'" H N N 29 A "HO3'" H N N 30 A "H2'" H N N 31 A "HO2'" H N N 32 A "H1'" H N N 33 A H8 H N N 34 A H61 H N N 35 A H62 H N N 36 A H2 H N N 37 ALA N N N N 38 ALA CA C N S 39 ALA C C N N 40 ALA O O N N 41 ALA CB C N N 42 ALA OXT O N N 43 ALA H H N N 44 ALA H2 H N N 45 ALA HA H N N 46 ALA HB1 H N N 47 ALA HB2 H N N 48 ALA HB3 H N N 49 ALA HXT H N N 50 ARG N N N N 51 ARG CA C N S 52 ARG C C N N 53 ARG O O N N 54 ARG CB C N N 55 ARG CG C N N 56 ARG CD C N N 57 ARG NE N N N 58 ARG CZ C N N 59 ARG NH1 N N N 60 ARG NH2 N N N 61 ARG OXT O N N 62 ARG H H N N 63 ARG H2 H N N 64 ARG HA H N N 65 ARG HB2 H N N 66 ARG HB3 H N N 67 ARG HG2 H N N 68 ARG HG3 H N N 69 ARG HD2 H N N 70 ARG HD3 H N N 71 ARG HE H N N 72 ARG HH11 H N N 73 ARG HH12 H N N 74 ARG HH21 H N N 75 ARG HH22 H N N 76 ARG HXT H N N 77 C OP3 O N N 78 C P P N N 79 C OP1 O N N 80 C OP2 O N N 81 C "O5'" O N N 82 C "C5'" C N N 83 C "C4'" C N R 84 C "O4'" O N N 85 C "C3'" C N S 86 C "O3'" O N N 87 C "C2'" C N R 88 C "O2'" O N N 89 C "C1'" C N R 90 C N1 N N N 91 C C2 C N N 92 C O2 O N N 93 C N3 N N N 94 C C4 C N N 95 C N4 N N N 96 C C5 C N N 97 C C6 C N N 98 C HOP3 H N N 99 C HOP2 H N N 100 C "H5'" H N N 101 C "H5''" H N N 102 C "H4'" H N N 103 C "H3'" H N N 104 C "HO3'" H N N 105 C "H2'" H N N 106 C "HO2'" H N N 107 C "H1'" H N N 108 C H41 H N N 109 C H42 H N N 110 C H5 H N N 111 C H6 H N N 112 G OP3 O N N 113 G P P N N 114 G OP1 O N N 115 G OP2 O N N 116 G "O5'" O N N 117 G "C5'" C N N 118 G "C4'" C N R 119 G "O4'" O N N 120 G "C3'" C N S 121 G "O3'" O N N 122 G "C2'" C N R 123 G "O2'" O N N 124 G "C1'" C N R 125 G N9 N Y N 126 G C8 C Y N 127 G N7 N Y N 128 G C5 C Y N 129 G C6 C N N 130 G O6 O N N 131 G N1 N N N 132 G C2 C N N 133 G N2 N N N 134 G N3 N N N 135 G C4 C Y N 136 G HOP3 H N N 137 G HOP2 H N N 138 G "H5'" H N N 139 G "H5''" H N N 140 G "H4'" H N N 141 G "H3'" H N N 142 G "HO3'" H N N 143 G "H2'" H N N 144 G "HO2'" H N N 145 G "H1'" H N N 146 G H8 H N N 147 G H1 H N N 148 G H21 H N N 149 G H22 H N N 150 GLN N N N N 151 GLN CA C N S 152 GLN C C N N 153 GLN O O N N 154 GLN CB C N N 155 GLN CG C N N 156 GLN CD C N N 157 GLN OE1 O N N 158 GLN NE2 N N N 159 GLN OXT O N N 160 GLN H H N N 161 GLN H2 H N N 162 GLN HA H N N 163 GLN HB2 H N N 164 GLN HB3 H N N 165 GLN HG2 H N N 166 GLN HG3 H N N 167 GLN HE21 H N N 168 GLN HE22 H N N 169 GLN HXT H N N 170 GLY N N N N 171 GLY CA C N N 172 GLY C C N N 173 GLY O O N N 174 GLY OXT O N N 175 GLY H H N N 176 GLY H2 H N N 177 GLY HA2 H N N 178 GLY HA3 H N N 179 GLY HXT H N N 180 GTP PG P N N 181 GTP O1G O N N 182 GTP O2G O N N 183 GTP O3G O N N 184 GTP O3B O N N 185 GTP PB P N N 186 GTP O1B O N N 187 GTP O2B O N N 188 GTP O3A O N N 189 GTP PA P N N 190 GTP O1A O N N 191 GTP O2A O N N 192 GTP "O5'" O N N 193 GTP "C5'" C N N 194 GTP "C4'" C N R 195 GTP "O4'" O N N 196 GTP "C3'" C N S 197 GTP "O3'" O N N 198 GTP "C2'" C N R 199 GTP "O2'" O N N 200 GTP "C1'" C N R 201 GTP N9 N Y N 202 GTP C8 C Y N 203 GTP N7 N Y N 204 GTP C5 C Y N 205 GTP C6 C N N 206 GTP O6 O N N 207 GTP N1 N N N 208 GTP C2 C N N 209 GTP N2 N N N 210 GTP N3 N N N 211 GTP C4 C Y N 212 GTP HOG2 H N N 213 GTP HOG3 H N N 214 GTP HOB2 H N N 215 GTP HOA2 H N N 216 GTP "H5'" H N N 217 GTP "H5''" H N N 218 GTP "H4'" H N N 219 GTP "H3'" H N N 220 GTP "HO3'" H N N 221 GTP "H2'" H N N 222 GTP "HO2'" H N N 223 GTP "H1'" H N N 224 GTP H8 H N N 225 GTP HN1 H N N 226 GTP HN21 H N N 227 GTP HN22 H N N 228 HIS N N N N 229 HIS CA C N S 230 HIS C C N N 231 HIS O O N N 232 HIS CB C N N 233 HIS CG C Y N 234 HIS ND1 N Y N 235 HIS CD2 C Y N 236 HIS CE1 C Y N 237 HIS NE2 N Y N 238 HIS OXT O N N 239 HIS H H N N 240 HIS H2 H N N 241 HIS HA H N N 242 HIS HB2 H N N 243 HIS HB3 H N N 244 HIS HD1 H N N 245 HIS HD2 H N N 246 HIS HE1 H N N 247 HIS HE2 H N N 248 HIS HXT H N N 249 HOH O O N N 250 HOH H1 H N N 251 HOH H2 H N N 252 ILE N N N N 253 ILE CA C N S 254 ILE C C N N 255 ILE O O N N 256 ILE CB C N S 257 ILE CG1 C N N 258 ILE CG2 C N N 259 ILE CD1 C N N 260 ILE OXT O N N 261 ILE H H N N 262 ILE H2 H N N 263 ILE HA H N N 264 ILE HB H N N 265 ILE HG12 H N N 266 ILE HG13 H N N 267 ILE HG21 H N N 268 ILE HG22 H N N 269 ILE HG23 H N N 270 ILE HD11 H N N 271 ILE HD12 H N N 272 ILE HD13 H N N 273 ILE HXT H N N 274 K K K N N 275 LYS N N N N 276 LYS CA C N S 277 LYS C C N N 278 LYS O O N N 279 LYS CB C N N 280 LYS CG C N N 281 LYS CD C N N 282 LYS CE C N N 283 LYS NZ N N N 284 LYS OXT O N N 285 LYS H H N N 286 LYS H2 H N N 287 LYS HA H N N 288 LYS HB2 H N N 289 LYS HB3 H N N 290 LYS HG2 H N N 291 LYS HG3 H N N 292 LYS HD2 H N N 293 LYS HD3 H N N 294 LYS HE2 H N N 295 LYS HE3 H N N 296 LYS HZ1 H N N 297 LYS HZ2 H N N 298 LYS HZ3 H N N 299 LYS HXT H N N 300 SER N N N N 301 SER CA C N S 302 SER C C N N 303 SER O O N N 304 SER CB C N N 305 SER OG O N N 306 SER OXT O N N 307 SER H H N N 308 SER H2 H N N 309 SER HA H N N 310 SER HB2 H N N 311 SER HB3 H N N 312 SER HG H N N 313 SER HXT H N N 314 TYR N N N N 315 TYR CA C N S 316 TYR C C N N 317 TYR O O N N 318 TYR CB C N N 319 TYR CG C Y N 320 TYR CD1 C Y N 321 TYR CD2 C Y N 322 TYR CE1 C Y N 323 TYR CE2 C Y N 324 TYR CZ C Y N 325 TYR OH O N N 326 TYR OXT O N N 327 TYR H H N N 328 TYR H2 H N N 329 TYR HA H N N 330 TYR HB2 H N N 331 TYR HB3 H N N 332 TYR HD1 H N N 333 TYR HD2 H N N 334 TYR HE1 H N N 335 TYR HE2 H N N 336 TYR HH H N N 337 TYR HXT H N N 338 U OP3 O N N 339 U P P N N 340 U OP1 O N N 341 U OP2 O N N 342 U "O5'" O N N 343 U "C5'" C N N 344 U "C4'" C N R 345 U "O4'" O N N 346 U "C3'" C N S 347 U "O3'" O N N 348 U "C2'" C N R 349 U "O2'" O N N 350 U "C1'" C N R 351 U N1 N N N 352 U C2 C N N 353 U O2 O N N 354 U N3 N N N 355 U C4 C N N 356 U O4 O N N 357 U C5 C N N 358 U C6 C N N 359 U HOP3 H N N 360 U HOP2 H N N 361 U "H5'" H N N 362 U "H5''" H N N 363 U "H4'" H N N 364 U "H3'" H N N 365 U "HO3'" H N N 366 U "H2'" H N N 367 U "HO2'" H N N 368 U "H1'" H N N 369 U H3 H N N 370 U H5 H N N 371 U H6 H N N 372 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A OP3 P sing N N 1 A OP3 HOP3 sing N N 2 A P OP1 doub N N 3 A P OP2 sing N N 4 A P "O5'" sing N N 5 A OP2 HOP2 sing N N 6 A "O5'" "C5'" sing N N 7 A "C5'" "C4'" sing N N 8 A "C5'" "H5'" sing N N 9 A "C5'" "H5''" sing N N 10 A "C4'" "O4'" sing N N 11 A "C4'" "C3'" sing N N 12 A "C4'" "H4'" sing N N 13 A "O4'" "C1'" sing N N 14 A "C3'" "O3'" sing N N 15 A "C3'" "C2'" sing N N 16 A "C3'" "H3'" sing N N 17 A "O3'" "HO3'" sing N N 18 A "C2'" "O2'" sing N N 19 A "C2'" "C1'" sing N N 20 A "C2'" "H2'" sing N N 21 A "O2'" "HO2'" sing N N 22 A "C1'" N9 sing N N 23 A "C1'" "H1'" sing N N 24 A N9 C8 sing Y N 25 A N9 C4 sing Y N 26 A C8 N7 doub Y N 27 A C8 H8 sing N N 28 A N7 C5 sing Y N 29 A C5 C6 sing Y N 30 A C5 C4 doub Y N 31 A C6 N6 sing N N 32 A C6 N1 doub Y N 33 A N6 H61 sing N N 34 A N6 H62 sing N N 35 A N1 C2 sing Y N 36 A C2 N3 doub Y N 37 A C2 H2 sing N N 38 A N3 C4 sing Y N 39 ALA N CA sing N N 40 ALA N H sing N N 41 ALA N H2 sing N N 42 ALA CA C sing N N 43 ALA CA CB sing N N 44 ALA CA HA sing N N 45 ALA C O doub N N 46 ALA C OXT sing N N 47 ALA CB HB1 sing N N 48 ALA CB HB2 sing N N 49 ALA CB HB3 sing N N 50 ALA OXT HXT sing N N 51 ARG N CA sing N N 52 ARG N H sing N N 53 ARG N H2 sing N N 54 ARG CA C sing N N 55 ARG CA CB sing N N 56 ARG CA HA sing N N 57 ARG C O doub N N 58 ARG C OXT sing N N 59 ARG CB CG sing N N 60 ARG CB HB2 sing N N 61 ARG CB HB3 sing N N 62 ARG CG CD sing N N 63 ARG CG HG2 sing N N 64 ARG CG HG3 sing N N 65 ARG CD NE sing N N 66 ARG CD HD2 sing N N 67 ARG CD HD3 sing N N 68 ARG NE CZ sing N N 69 ARG NE HE sing N N 70 ARG CZ NH1 sing N N 71 ARG CZ NH2 doub N N 72 ARG NH1 HH11 sing N N 73 ARG NH1 HH12 sing N N 74 ARG NH2 HH21 sing N N 75 ARG NH2 HH22 sing N N 76 ARG OXT HXT sing N N 77 C OP3 P sing N N 78 C OP3 HOP3 sing N N 79 C P OP1 doub N N 80 C P OP2 sing N N 81 C P "O5'" sing N N 82 C OP2 HOP2 sing N N 83 C "O5'" "C5'" sing N N 84 C "C5'" "C4'" sing N N 85 C "C5'" "H5'" sing N N 86 C "C5'" "H5''" sing N N 87 C "C4'" "O4'" sing N N 88 C "C4'" "C3'" sing N N 89 C "C4'" "H4'" sing N N 90 C "O4'" "C1'" sing N N 91 C "C3'" "O3'" sing N N 92 C "C3'" "C2'" sing N N 93 C "C3'" "H3'" sing N N 94 C "O3'" "HO3'" sing N N 95 C "C2'" "O2'" sing N N 96 C "C2'" "C1'" sing N N 97 C "C2'" "H2'" sing N N 98 C "O2'" "HO2'" sing N N 99 C "C1'" N1 sing N N 100 C "C1'" "H1'" sing N N 101 C N1 C2 sing N N 102 C N1 C6 sing N N 103 C C2 O2 doub N N 104 C C2 N3 sing N N 105 C N3 C4 doub N N 106 C C4 N4 sing N N 107 C C4 C5 sing N N 108 C N4 H41 sing N N 109 C N4 H42 sing N N 110 C C5 C6 doub N N 111 C C5 H5 sing N N 112 C C6 H6 sing N N 113 G OP3 P sing N N 114 G OP3 HOP3 sing N N 115 G P OP1 doub N N 116 G P OP2 sing N N 117 G P "O5'" sing N N 118 G OP2 HOP2 sing N N 119 G "O5'" "C5'" sing N N 120 G "C5'" "C4'" sing N N 121 G "C5'" "H5'" sing N N 122 G "C5'" "H5''" sing N N 123 G "C4'" "O4'" sing N N 124 G "C4'" "C3'" sing N N 125 G "C4'" "H4'" sing N N 126 G "O4'" "C1'" sing N N 127 G "C3'" "O3'" sing N N 128 G "C3'" "C2'" sing N N 129 G "C3'" "H3'" sing N N 130 G "O3'" "HO3'" sing N N 131 G "C2'" "O2'" sing N N 132 G "C2'" "C1'" sing N N 133 G "C2'" "H2'" sing N N 134 G "O2'" "HO2'" sing N N 135 G "C1'" N9 sing N N 136 G "C1'" "H1'" sing N N 137 G N9 C8 sing Y N 138 G N9 C4 sing Y N 139 G C8 N7 doub Y N 140 G C8 H8 sing N N 141 G N7 C5 sing Y N 142 G C5 C6 sing N N 143 G C5 C4 doub Y N 144 G C6 O6 doub N N 145 G C6 N1 sing N N 146 G N1 C2 sing N N 147 G N1 H1 sing N N 148 G C2 N2 sing N N 149 G C2 N3 doub N N 150 G N2 H21 sing N N 151 G N2 H22 sing N N 152 G N3 C4 sing N N 153 GLN N CA sing N N 154 GLN N H sing N N 155 GLN N H2 sing N N 156 GLN CA C sing N N 157 GLN CA CB sing N N 158 GLN CA HA sing N N 159 GLN C O doub N N 160 GLN C OXT sing N N 161 GLN CB CG sing N N 162 GLN CB HB2 sing N N 163 GLN CB HB3 sing N N 164 GLN CG CD sing N N 165 GLN CG HG2 sing N N 166 GLN CG HG3 sing N N 167 GLN CD OE1 doub N N 168 GLN CD NE2 sing N N 169 GLN NE2 HE21 sing N N 170 GLN NE2 HE22 sing N N 171 GLN OXT HXT sing N N 172 GLY N CA sing N N 173 GLY N H sing N N 174 GLY N H2 sing N N 175 GLY CA C sing N N 176 GLY CA HA2 sing N N 177 GLY CA HA3 sing N N 178 GLY C O doub N N 179 GLY C OXT sing N N 180 GLY OXT HXT sing N N 181 GTP PG O1G doub N N 182 GTP PG O2G sing N N 183 GTP PG O3G sing N N 184 GTP PG O3B sing N N 185 GTP O2G HOG2 sing N N 186 GTP O3G HOG3 sing N N 187 GTP O3B PB sing N N 188 GTP PB O1B doub N N 189 GTP PB O2B sing N N 190 GTP PB O3A sing N N 191 GTP O2B HOB2 sing N N 192 GTP O3A PA sing N N 193 GTP PA O1A doub N N 194 GTP PA O2A sing N N 195 GTP PA "O5'" sing N N 196 GTP O2A HOA2 sing N N 197 GTP "O5'" "C5'" sing N N 198 GTP "C5'" "C4'" sing N N 199 GTP "C5'" "H5'" sing N N 200 GTP "C5'" "H5''" sing N N 201 GTP "C4'" "O4'" sing N N 202 GTP "C4'" "C3'" sing N N 203 GTP "C4'" "H4'" sing N N 204 GTP "O4'" "C1'" sing N N 205 GTP "C3'" "O3'" sing N N 206 GTP "C3'" "C2'" sing N N 207 GTP "C3'" "H3'" sing N N 208 GTP "O3'" "HO3'" sing N N 209 GTP "C2'" "O2'" sing N N 210 GTP "C2'" "C1'" sing N N 211 GTP "C2'" "H2'" sing N N 212 GTP "O2'" "HO2'" sing N N 213 GTP "C1'" N9 sing N N 214 GTP "C1'" "H1'" sing N N 215 GTP N9 C8 sing Y N 216 GTP N9 C4 sing Y N 217 GTP C8 N7 doub Y N 218 GTP C8 H8 sing N N 219 GTP N7 C5 sing Y N 220 GTP C5 C6 sing N N 221 GTP C5 C4 doub Y N 222 GTP C6 O6 doub N N 223 GTP C6 N1 sing N N 224 GTP N1 C2 sing N N 225 GTP N1 HN1 sing N N 226 GTP C2 N2 sing N N 227 GTP C2 N3 doub N N 228 GTP N2 HN21 sing N N 229 GTP N2 HN22 sing N N 230 GTP N3 C4 sing N N 231 HIS N CA sing N N 232 HIS N H sing N N 233 HIS N H2 sing N N 234 HIS CA C sing N N 235 HIS CA CB sing N N 236 HIS CA HA sing N N 237 HIS C O doub N N 238 HIS C OXT sing N N 239 HIS CB CG sing N N 240 HIS CB HB2 sing N N 241 HIS CB HB3 sing N N 242 HIS CG ND1 sing Y N 243 HIS CG CD2 doub Y N 244 HIS ND1 CE1 doub Y N 245 HIS ND1 HD1 sing N N 246 HIS CD2 NE2 sing Y N 247 HIS CD2 HD2 sing N N 248 HIS CE1 NE2 sing Y N 249 HIS CE1 HE1 sing N N 250 HIS NE2 HE2 sing N N 251 HIS OXT HXT sing N N 252 HOH O H1 sing N N 253 HOH O H2 sing N N 254 ILE N CA sing N N 255 ILE N H sing N N 256 ILE N H2 sing N N 257 ILE CA C sing N N 258 ILE CA CB sing N N 259 ILE CA HA sing N N 260 ILE C O doub N N 261 ILE C OXT sing N N 262 ILE CB CG1 sing N N 263 ILE CB CG2 sing N N 264 ILE CB HB sing N N 265 ILE CG1 CD1 sing N N 266 ILE CG1 HG12 sing N N 267 ILE CG1 HG13 sing N N 268 ILE CG2 HG21 sing N N 269 ILE CG2 HG22 sing N N 270 ILE CG2 HG23 sing N N 271 ILE CD1 HD11 sing N N 272 ILE CD1 HD12 sing N N 273 ILE CD1 HD13 sing N N 274 ILE OXT HXT sing N N 275 LYS N CA sing N N 276 LYS N H sing N N 277 LYS N H2 sing N N 278 LYS CA C sing N N 279 LYS CA CB sing N N 280 LYS CA HA sing N N 281 LYS C O doub N N 282 LYS C OXT sing N N 283 LYS CB CG sing N N 284 LYS CB HB2 sing N N 285 LYS CB HB3 sing N N 286 LYS CG CD sing N N 287 LYS CG HG2 sing N N 288 LYS CG HG3 sing N N 289 LYS CD CE sing N N 290 LYS CD HD2 sing N N 291 LYS CD HD3 sing N N 292 LYS CE NZ sing N N 293 LYS CE HE2 sing N N 294 LYS CE HE3 sing N N 295 LYS NZ HZ1 sing N N 296 LYS NZ HZ2 sing N N 297 LYS NZ HZ3 sing N N 298 LYS OXT HXT sing N N 299 SER N CA sing N N 300 SER N H sing N N 301 SER N H2 sing N N 302 SER CA C sing N N 303 SER CA CB sing N N 304 SER CA HA sing N N 305 SER C O doub N N 306 SER C OXT sing N N 307 SER CB OG sing N N 308 SER CB HB2 sing N N 309 SER CB HB3 sing N N 310 SER OG HG sing N N 311 SER OXT HXT sing N N 312 TYR N CA sing N N 313 TYR N H sing N N 314 TYR N H2 sing N N 315 TYR CA C sing N N 316 TYR CA CB sing N N 317 TYR CA HA sing N N 318 TYR C O doub N N 319 TYR C OXT sing N N 320 TYR CB CG sing N N 321 TYR CB HB2 sing N N 322 TYR CB HB3 sing N N 323 TYR CG CD1 doub Y N 324 TYR CG CD2 sing Y N 325 TYR CD1 CE1 sing Y N 326 TYR CD1 HD1 sing N N 327 TYR CD2 CE2 doub Y N 328 TYR CD2 HD2 sing N N 329 TYR CE1 CZ doub Y N 330 TYR CE1 HE1 sing N N 331 TYR CE2 CZ sing Y N 332 TYR CE2 HE2 sing N N 333 TYR CZ OH sing N N 334 TYR OH HH sing N N 335 TYR OXT HXT sing N N 336 U OP3 P sing N N 337 U OP3 HOP3 sing N N 338 U P OP1 doub N N 339 U P OP2 sing N N 340 U P "O5'" sing N N 341 U OP2 HOP2 sing N N 342 U "O5'" "C5'" sing N N 343 U "C5'" "C4'" sing N N 344 U "C5'" "H5'" sing N N 345 U "C5'" "H5''" sing N N 346 U "C4'" "O4'" sing N N 347 U "C4'" "C3'" sing N N 348 U "C4'" "H4'" sing N N 349 U "O4'" "C1'" sing N N 350 U "C3'" "O3'" sing N N 351 U "C3'" "C2'" sing N N 352 U "C3'" "H3'" sing N N 353 U "O3'" "HO3'" sing N N 354 U "C2'" "O2'" sing N N 355 U "C2'" "C1'" sing N N 356 U "C2'" "H2'" sing N N 357 U "O2'" "HO2'" sing N N 358 U "C1'" N1 sing N N 359 U "C1'" "H1'" sing N N 360 U N1 C2 sing N N 361 U N1 C6 sing N N 362 U C2 O2 doub N N 363 U C2 N3 sing N N 364 U N3 C4 sing N N 365 U N3 H3 sing N N 366 U C4 O4 doub N N 367 U C4 C5 sing N N 368 U C5 C6 doub N N 369 U C5 H5 sing N N 370 U C6 H6 sing N N 371 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 9DE5 'double helix' 9DE5 'a-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A GTP 1 1_555 A C 57 1_555 -0.809 -0.048 -0.119 -10.194 -5.160 5.403 1 C_GTP2:C58_C C 2 ? C 58 ? 19 1 1 A G 2 1_555 A C 56 1_555 -0.153 -0.199 0.030 -11.097 -16.740 -2.039 2 C_G3:C57_C C 3 ? C 57 ? 19 1 1 A U 3 1_555 A A 55 1_555 1.007 -0.042 -0.311 16.153 -5.986 -3.463 3 C_U4:A56_C C 4 ? C 56 ? 20 1 1 A U 5 1_555 A A 54 1_555 0.475 0.156 -0.071 -3.131 -8.590 1.863 4 C_U6:A55_C C 6 ? C 55 ? 20 1 1 A C 6 1_555 A G 53 1_555 0.566 0.060 -0.134 -2.909 -7.170 0.813 5 C_C7:G54_C C 7 ? C 54 ? 19 1 1 A U 7 1_555 A G 52 1_555 2.410 -0.673 0.596 -4.846 -2.604 -1.614 6 C_U8:G53_C C 8 ? C 53 ? 28 1 1 A C 8 1_555 A G 51 1_555 -0.452 -0.038 0.460 0.356 -15.941 2.477 7 C_C9:G52_C C 9 ? C 52 ? 19 1 1 A U 9 1_555 A A 50 1_555 0.347 -0.326 0.194 4.044 -6.847 0.098 8 C_U10:A51_C C 10 ? C 51 ? 20 1 1 A G 10 1_555 A U 49 1_555 -2.077 -0.509 0.265 2.699 -14.565 2.237 9 C_G11:U50_C C 11 ? C 50 ? 28 1 1 A G 11 1_555 A C 48 1_555 -0.054 0.173 -0.205 -4.879 -20.236 3.444 10 C_G12:C49_C C 12 ? C 49 ? 19 1 1 A U 12 1_555 A A 47 1_555 0.113 0.071 -0.034 -3.888 -19.602 -0.564 11 C_U13:A48_C C 13 ? C 48 ? 20 1 1 A U 13 1_555 A A 46 1_555 0.182 0.009 0.208 4.084 -11.847 -0.363 12 C_U14:A47_C C 14 ? C 47 ? 20 1 1 A A 14 1_555 A U 45 1_555 0.200 0.086 0.464 -1.717 -14.191 4.864 13 C_A15:U46_C C 15 ? C 46 ? 20 1 1 A G 15 1_555 A C 44 1_555 0.497 -0.325 0.011 -6.930 -21.480 -2.423 14 C_G16:C45_C C 16 ? C 45 ? 19 1 1 A C 17 1_555 A G 43 1_555 -0.607 -0.014 -0.646 -0.971 -11.534 7.940 15 C_C18:G44_C C 18 ? C 44 ? 19 1 1 A C 18 1_555 A G 42 1_555 -0.225 0.487 0.234 -13.473 -4.565 4.042 16 C_C19:G43_C C 19 ? C 43 ? 19 1 1 A A 19 1_555 A U 41 1_555 -0.075 0.113 0.306 -7.339 -19.246 5.724 17 C_A20:U42_C C 20 ? C 42 ? 20 1 1 A G 20 1_555 A C 40 1_555 -0.571 -0.625 0.397 -2.670 -25.437 -7.686 18 C_G21:C41_C C 21 ? C 41 ? 19 1 1 A A 21 1_555 A U 39 1_555 -1.685 -0.228 0.468 -13.323 -32.425 -5.933 19 C_A22:U40_C C 22 ? C 40 ? 20 1 1 A G 25 1_555 A C 38 1_555 -0.228 -0.417 -0.198 -9.805 -13.965 0.409 20 C_G26:C39_C C 26 ? C 39 ? 19 1 1 A A 26 1_555 A U 37 1_555 -0.163 0.486 -0.375 -13.740 -6.989 12.015 21 C_A27:U38_C C 27 ? C 38 ? ? 1 1 A G 27 1_555 A C 36 1_555 -1.778 -0.292 -0.498 -13.169 -17.903 -5.797 22 C_G28:C37_C C 28 ? C 37 ? 19 1 1 A C 28 1_555 A G 35 1_555 1.289 0.018 -0.425 -5.868 -11.654 -9.912 23 C_C29:G36_C C 29 ? C 36 ? ? 1 1 A C 29 1_555 A A 34 1_555 4.884 -1.540 -0.205 1.432 2.113 -17.690 24 C_C30:A35_C C 30 ? C 35 ? ? 1 1 A G 30 1_555 A A 33 1_555 7.382 -5.645 0.121 25.295 8.434 -27.453 25 C_G31:A34_C C 31 ? C 34 ? ? ? 1 B GTP 1 1_555 B C 57 1_555 -0.368 -0.156 -0.052 -5.882 -6.418 2.420 26 E_GTP2:C58_E E 2 ? E 58 ? 19 1 1 B G 2 1_555 B C 56 1_555 -0.642 -0.203 0.038 -8.794 -18.587 3.198 27 E_G3:C57_E E 3 ? E 57 ? 19 1 1 B U 3 1_555 B A 55 1_555 1.079 -0.012 -0.125 10.778 -5.081 -1.215 28 E_U4:A56_E E 4 ? E 56 ? 20 1 1 B U 5 1_555 B A 54 1_555 -0.335 0.172 -0.736 9.163 -11.529 -1.104 29 E_U6:A55_E E 6 ? E 55 ? 20 1 1 B C 6 1_555 B G 53 1_555 0.158 0.087 0.164 -2.127 -3.674 3.556 30 E_C7:G54_E E 7 ? E 54 ? 19 1 1 B U 7 1_555 B G 52 1_555 1.811 -0.409 -0.107 1.868 -2.702 2.291 31 E_U8:G53_E E 8 ? E 53 ? 28 1 1 B C 8 1_555 B G 51 1_555 0.018 -0.323 0.073 1.064 -15.067 1.363 32 E_C9:G52_E E 9 ? E 52 ? 19 1 1 B U 9 1_555 B A 50 1_555 0.077 -0.464 0.017 1.536 -5.740 -6.227 33 E_U10:A51_E E 10 ? E 51 ? 20 1 1 B G 10 1_555 B U 49 1_555 -1.948 -0.343 0.328 6.255 -13.353 0.345 34 E_G11:U50_E E 11 ? E 50 ? 28 1 1 B G 11 1_555 B C 48 1_555 0.011 0.228 0.075 -3.200 -17.611 9.481 35 E_G12:C49_E E 12 ? E 49 ? 19 1 1 B U 12 1_555 B A 47 1_555 0.115 -0.127 -0.123 0.710 -26.519 -2.792 36 E_U13:A48_E E 13 ? E 48 ? 20 1 1 B U 13 1_555 B A 46 1_555 -0.270 0.386 0.331 4.677 -19.798 3.038 37 E_U14:A47_E E 14 ? E 47 ? 20 1 1 B A 14 1_555 B U 45 1_555 -0.462 0.281 0.672 3.103 -17.768 3.466 38 E_A15:U46_E E 15 ? E 46 ? 20 1 1 B G 15 1_555 B C 44 1_555 0.296 0.091 0.320 -2.169 -24.344 -0.391 39 E_G16:C45_E E 16 ? E 45 ? 19 1 1 B C 17 1_555 B G 43 1_555 0.327 -0.253 -0.464 -0.613 -13.437 3.201 40 E_C18:G44_E E 18 ? E 44 ? 19 1 1 B C 18 1_555 B G 42 1_555 -0.195 0.033 0.280 -10.242 -6.891 5.415 41 E_C19:G43_E E 19 ? E 43 ? 19 1 1 B A 19 1_555 B U 41 1_555 -0.577 0.120 0.276 -2.982 -7.657 0.038 42 E_A20:U42_E E 20 ? E 42 ? 20 1 1 B G 20 1_555 B C 40 1_555 -1.034 -0.402 0.531 4.041 -22.368 -5.973 43 E_G21:C41_E E 21 ? E 41 ? 19 1 1 B A 21 1_555 B U 39 1_555 -5.078 -2.160 -0.284 -2.452 -39.246 -32.938 44 E_A22:U40_E E 22 ? E 40 ? ? ? 1 B G 25 1_555 B C 38 1_555 -0.852 0.126 -0.627 -19.041 -5.450 5.753 45 E_G26:C39_E E 26 ? E 39 ? 19 1 1 B A 26 1_555 B U 37 1_555 -0.137 0.048 -0.066 1.393 0.588 3.108 46 E_A27:U38_E E 27 ? E 38 ? 20 1 1 B G 27 1_555 B C 36 1_555 -0.485 -0.162 -0.163 -0.971 -16.563 1.942 47 E_G28:C37_E E 28 ? E 37 ? 19 1 1 B C 28 1_555 B G 35 1_555 -0.178 -0.088 0.061 -6.769 -7.814 2.446 48 E_C29:G36_E E 29 ? E 36 ? 19 1 1 B C 29 1_555 B A 34 1_555 3.603 -0.919 0.100 2.489 7.078 -1.916 49 E_C30:A35_E E 30 ? E 35 ? ? 1 1 B G 30 1_555 B A 33 1_555 6.982 -5.399 0.663 31.119 10.776 -12.817 50 E_G31:A34_E E 31 ? E 34 ? ? ? 1 C GTP 1 1_555 C C 57 1_555 -0.050 -0.082 -0.048 -12.015 0.631 -6.450 51 B_GTP2:C58_B B 2 ? B 58 ? 19 1 1 C G 2 1_555 C C 56 1_555 0.158 0.126 -0.187 -15.139 -17.642 -5.037 52 B_G3:C57_B B 3 ? B 57 ? 19 1 1 C U 3 1_555 C A 55 1_555 0.637 -0.057 0.262 -0.272 -12.014 -6.264 53 B_U4:A56_B B 4 ? B 56 ? 20 1 1 C U 5 1_555 C A 54 1_555 -0.513 -0.163 -0.083 6.928 -12.946 1.911 54 B_U6:A55_B B 6 ? B 55 ? 20 1 1 C C 6 1_555 C G 53 1_555 0.189 -0.050 0.380 -3.851 -7.942 1.906 55 B_C7:G54_B B 7 ? B 54 ? 19 1 1 C U 7 1_555 C G 52 1_555 2.143 -0.538 0.032 0.659 -10.043 0.664 56 B_U8:G53_B B 8 ? B 53 ? 28 1 1 C C 8 1_555 C G 51 1_555 -0.560 -0.101 -0.224 5.411 -19.817 1.840 57 B_C9:G52_B B 9 ? B 52 ? 19 1 1 C U 9 1_555 C A 50 1_555 0.228 -0.234 0.165 -6.812 -7.857 -3.090 58 B_U10:A51_B B 10 ? B 51 ? 20 1 1 C G 10 1_555 C U 49 1_555 -1.610 -0.358 0.107 2.865 -8.245 4.955 59 B_G11:U50_B B 11 ? B 50 ? 28 1 1 C G 11 1_555 C C 48 1_555 -0.525 0.122 0.162 -5.321 -10.008 10.617 60 B_G12:C49_B B 12 ? B 49 ? 19 1 1 C U 12 1_555 C A 47 1_555 0.172 -0.468 0.243 -5.692 -13.956 -5.821 61 B_U13:A48_B B 13 ? B 48 ? 20 1 1 C U 13 1_555 C A 46 1_555 -0.104 0.053 -0.060 -2.909 -15.364 2.093 62 B_U14:A47_B B 14 ? B 47 ? 20 1 1 C A 14 1_555 C U 45 1_555 -0.038 0.105 0.521 -5.044 -14.038 2.559 63 B_A15:U46_B B 15 ? B 46 ? 20 1 1 C G 15 1_555 C C 44 1_555 0.061 -0.090 0.701 -3.015 -23.013 -0.474 64 B_G16:C45_B B 16 ? B 45 ? 19 1 1 C C 17 1_555 C G 43 1_555 0.175 -0.155 -0.208 5.180 -12.334 5.513 65 B_C18:G44_B B 18 ? B 44 ? 19 1 1 C C 18 1_555 C G 42 1_555 -0.207 -0.390 0.116 -9.976 -5.240 -5.570 66 B_C19:G43_B B 19 ? B 43 ? 19 1 1 C A 19 1_555 C U 41 1_555 -0.241 -0.137 0.260 -5.768 -8.105 0.999 67 B_A20:U42_B B 20 ? B 42 ? 20 1 1 C G 20 1_555 C C 40 1_555 -0.229 0.010 -0.022 -5.553 -15.397 3.260 68 B_G21:C41_B B 21 ? B 41 ? 19 1 1 C A 21 1_555 C U 39 1_555 0.212 -0.229 -0.149 -12.170 -14.864 -3.235 69 B_A22:U40_B B 22 ? B 40 ? 20 1 1 C G 25 1_555 C C 38 1_555 -0.358 -0.436 -0.211 -10.115 -8.018 2.519 70 B_G26:C39_B B 26 ? B 39 ? 19 1 1 C A 26 1_555 C U 37 1_555 -0.196 0.075 0.233 2.360 0.571 3.086 71 B_A27:U38_B B 27 ? B 38 ? 20 1 1 C G 27 1_555 C C 36 1_555 -0.216 -0.120 -0.126 1.722 -6.338 0.301 72 B_G28:C37_B B 28 ? B 37 ? 19 1 1 C C 28 1_555 C G 35 1_555 0.350 -0.215 -0.260 0.665 -5.622 4.646 73 B_C29:G36_B B 29 ? B 36 ? 19 1 1 C C 29 1_555 C A 34 1_555 2.629 -0.464 -0.043 1.139 4.016 5.893 74 B_C30:A35_B B 30 ? B 35 ? ? 1 1 C G 30 1_555 C A 33 1_555 7.881 -5.270 0.378 24.626 5.178 -45.967 75 B_G31:A34_B B 31 ? B 34 ? ? ? 1 D GTP 1 1_555 D C 57 1_555 -0.826 -0.253 -0.241 -9.192 -10.458 0.089 76 D_GTP2:C58_D D 2 ? D 58 ? 19 1 1 D G 2 1_555 D C 56 1_555 0.117 0.014 -0.535 -19.731 -22.417 -3.548 77 D_G3:C57_D D 3 ? D 57 ? 19 1 1 D U 3 1_555 D A 55 1_555 0.231 0.063 0.266 -7.394 -9.277 1.031 78 D_U4:A56_D D 4 ? D 56 ? 20 1 1 D U 5 1_555 D A 54 1_555 -0.530 -0.226 0.373 0.961 -16.970 7.020 79 D_U6:A55_D D 6 ? D 55 ? 20 1 1 D C 6 1_555 D G 53 1_555 -0.076 -0.185 0.010 -3.196 -6.986 -0.814 80 D_C7:G54_D D 7 ? D 54 ? 19 1 1 D U 7 1_555 D G 52 1_555 2.434 -0.629 0.355 -5.654 -3.582 -5.463 81 D_U8:G53_D D 8 ? D 53 ? 28 1 1 D C 8 1_555 D G 51 1_555 -0.096 -0.402 -0.034 5.039 -22.342 2.547 82 D_C9:G52_D D 9 ? D 52 ? 19 1 1 D U 9 1_555 D A 50 1_555 -0.496 -0.358 0.247 -7.182 -10.709 -1.165 83 D_U10:A51_D D 10 ? D 51 ? 20 1 1 D G 10 1_555 D U 49 1_555 -1.389 -0.020 -0.092 -4.564 -15.514 0.042 84 D_G11:U50_D D 11 ? D 50 ? 28 1 1 D G 11 1_555 D C 48 1_555 0.573 0.473 -0.023 -2.495 -13.721 13.534 85 D_G12:C49_D D 12 ? D 49 ? ? 1 1 D U 12 1_555 D A 47 1_555 -0.025 -0.027 0.072 -0.861 -8.110 -4.046 86 D_U13:A48_D D 13 ? D 48 ? 20 1 1 D U 13 1_555 D A 46 1_555 0.513 0.034 -0.027 1.099 -14.741 1.212 87 D_U14:A47_D D 14 ? D 47 ? 20 1 1 D A 14 1_555 D U 45 1_555 1.502 0.072 0.898 -0.336 -17.616 7.989 88 D_A15:U46_D D 15 ? D 46 ? ? ? 1 D G 15 1_555 D C 44 1_555 -0.908 0.022 -0.375 -5.941 -22.826 -5.901 89 D_G16:C45_D D 16 ? D 45 ? 19 1 1 D C 17 1_555 D G 43 1_555 0.422 -0.308 -0.334 -6.139 -10.652 -0.401 90 D_C18:G44_D D 18 ? D 44 ? 19 1 1 D C 18 1_555 D G 42 1_555 -0.999 0.202 0.558 -10.635 1.042 -6.527 91 D_C19:G43_D D 19 ? D 43 ? 19 1 1 D A 19 1_555 D U 41 1_555 -0.813 0.111 0.331 1.836 -9.198 -8.763 92 D_A20:U42_D D 20 ? D 42 ? 20 1 1 D G 20 1_555 D C 40 1_555 -0.330 -0.117 -0.070 -5.526 -19.801 -4.157 93 D_G21:C41_D D 21 ? D 41 ? 19 1 1 D A 21 1_555 D U 39 1_555 0.485 0.170 -0.159 0.051 -8.258 -11.506 94 D_A22:U40_D D 22 ? D 40 ? 20 1 1 D G 25 1_555 D C 38 1_555 -0.706 -0.137 0.092 -6.577 -16.973 1.094 95 D_G26:C39_D D 26 ? D 39 ? 19 1 1 D A 26 1_555 D U 37 1_555 0.259 0.372 0.458 -3.702 -16.067 13.638 96 D_A27:U38_D D 27 ? D 38 ? ? 1 1 D G 27 1_555 D C 36 1_555 -0.037 0.063 -0.179 -0.551 -11.547 -3.718 97 D_G28:C37_D D 28 ? D 37 ? 19 1 1 D C 28 1_555 D G 35 1_555 0.207 -0.043 0.034 -4.672 -9.647 2.729 98 D_C29:G36_D D 29 ? D 36 ? 19 1 1 D C 29 1_555 D A 34 1_555 3.463 -0.955 0.076 -7.859 -0.467 -11.610 99 D_C30:A35_D D 30 ? D 35 ? ? 1 1 D G 30 1_555 D A 33 1_555 7.821 -5.135 0.676 29.110 -4.183 -45.508 100 D_G31:A34_D D 31 ? D 34 ? ? ? # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A GTP 1 1_555 A C 57 1_555 A G 2 1_555 A C 56 1_555 -0.885 -2.079 3.288 -2.792 4.259 31.735 -4.501 1.111 3.055 7.725 5.065 32.131 1 CC_GTP2G3:C57C58_CC C 2 ? C 58 ? C 3 ? C 57 ? 1 A G 2 1_555 A C 56 1_555 A U 3 1_555 A A 55 1_555 -0.397 -0.464 2.707 3.576 7.751 35.766 -1.591 1.023 2.505 12.404 -5.722 36.738 2 CC_G3U4:A56C57_CC C 3 ? C 57 ? C 4 ? C 56 ? 1 A U 3 1_555 A A 55 1_555 A U 5 1_555 A A 54 1_555 -2.853 -0.541 3.449 -11.434 2.421 54.247 -0.743 2.307 3.905 2.621 12.378 55.398 3 CC_U4U6:A55A56_CC C 4 ? C 56 ? C 6 ? C 55 ? 1 A U 5 1_555 A A 54 1_555 A C 6 1_555 A G 53 1_555 -0.233 -1.627 3.308 0.787 -2.434 32.810 -2.446 0.549 3.410 -4.302 -1.391 32.906 4 CC_U6C7:G54A55_CC C 6 ? C 55 ? C 7 ? C 54 ? 1 A C 6 1_555 A G 53 1_555 A U 7 1_555 A G 52 1_555 -0.432 -1.349 3.331 -3.395 5.695 36.864 -2.845 0.229 3.122 8.918 5.315 37.435 5 CC_C7U8:G53G54_CC C 7 ? C 54 ? C 8 ? C 53 ? 1 A U 7 1_555 A G 52 1_555 A C 8 1_555 A G 51 1_555 0.767 -1.996 2.721 6.332 7.072 25.362 -5.667 -0.387 2.217 15.434 -13.819 27.052 6 CC_U8C9:G52G53_CC C 8 ? C 53 ? C 9 ? C 52 ? 1 A C 8 1_555 A G 51 1_555 A U 9 1_555 A A 50 1_555 -1.047 -1.467 3.064 -3.080 11.621 28.089 -4.798 1.458 2.383 22.673 6.010 30.505 7 CC_C9U10:A51G52_CC C 9 ? C 52 ? C 10 ? C 51 ? 1 A U 9 1_555 A A 50 1_555 A G 10 1_555 A U 49 1_555 0.213 -1.490 2.942 -3.390 12.913 27.158 -4.952 -0.958 2.003 25.627 6.728 30.207 8 CC_U10G11:U50A51_CC C 10 ? C 51 ? C 11 ? C 50 ? 1 A G 10 1_555 A U 49 1_555 A G 11 1_555 A C 48 1_555 -0.086 -1.072 3.507 0.801 8.135 39.891 -2.480 0.216 3.234 11.773 -1.160 40.687 9 CC_G11G12:C49U50_CC C 11 ? C 50 ? C 12 ? C 49 ? 1 A G 11 1_555 A C 48 1_555 A U 12 1_555 A A 47 1_555 -0.358 -1.188 3.118 -2.207 6.579 33.435 -2.988 0.287 2.856 11.284 3.786 34.127 10 CC_G12U13:A48C49_CC C 12 ? C 49 ? C 13 ? C 48 ? 1 A U 12 1_555 A A 47 1_555 A U 13 1_555 A A 46 1_555 0.216 -1.123 3.103 -1.595 0.836 33.601 -2.068 -0.619 3.061 1.445 2.757 33.648 11 CC_U13U14:A47A48_CC C 13 ? C 48 ? C 14 ? C 47 ? 1 A U 13 1_555 A A 46 1_555 A A 14 1_555 A U 45 1_555 0.495 -1.374 3.268 2.495 6.807 32.931 -3.438 -0.462 2.962 11.830 -4.336 33.698 12 CC_U14A15:U46A47_CC C 14 ? C 47 ? C 15 ? C 46 ? 1 A A 14 1_555 A U 45 1_555 A G 15 1_555 A C 44 1_555 -0.165 -1.271 3.347 4.478 12.406 33.207 -3.795 0.890 2.674 20.720 -7.478 35.662 13 CC_A15G16:C45U46_CC C 15 ? C 46 ? C 16 ? C 45 ? 1 A G 15 1_555 A C 44 1_555 A C 17 1_555 A G 43 1_555 -1.108 -1.192 2.766 3.611 7.847 43.916 -2.142 1.721 2.435 10.374 -4.773 44.716 14 CC_G16C18:G44C45_CC C 16 ? C 45 ? C 18 ? C 44 ? 1 A C 17 1_555 A G 43 1_555 A C 18 1_555 A G 42 1_555 -0.327 -1.831 3.639 -3.679 10.340 32.452 -4.803 -0.046 2.953 17.876 6.360 34.210 15 CC_C18C19:G43G44_CC C 18 ? C 44 ? C 19 ? C 43 ? 1 A C 18 1_555 A G 42 1_555 A A 19 1_555 A U 41 1_555 0.385 -1.294 3.094 2.732 6.480 27.937 -3.919 -0.219 2.754 13.160 -5.548 28.791 16 CC_C19A20:U42G43_CC C 19 ? C 43 ? C 20 ? C 42 ? 1 A A 19 1_555 A U 41 1_555 A G 20 1_555 A C 40 1_555 0.195 -1.822 3.270 1.686 2.178 21.889 -5.575 0.121 3.082 5.707 -4.418 22.059 17 CC_A20G21:C41U42_CC C 20 ? C 42 ? C 21 ? C 41 ? 1 A G 20 1_555 A C 40 1_555 A A 21 1_555 A U 39 1_555 1.002 -2.093 3.277 4.638 13.507 30.628 -5.576 -1.051 2.300 24.001 -8.241 33.721 18 CC_G21A22:U40C41_CC C 21 ? C 41 ? C 22 ? C 40 ? 1 A A 21 1_555 A U 39 1_555 A G 25 1_555 A C 38 1_555 -0.796 -1.811 3.169 6.474 12.516 48.973 -2.892 1.331 2.546 14.748 -7.628 50.839 19 CC_A22G26:C39U40_CC C 22 ? C 40 ? C 26 ? C 39 ? 1 A G 25 1_555 A C 38 1_555 A A 26 1_555 A U 37 1_555 0.569 -1.693 3.539 2.788 5.199 34.224 -3.675 -0.506 3.289 8.754 -4.694 34.714 20 CC_G26A27:U38C39_CC C 26 ? C 39 ? C 27 ? C 38 ? 1 A A 26 1_555 A U 37 1_555 A G 27 1_555 A C 36 1_555 0.742 -2.382 3.155 4.260 15.405 15.219 -10.343 -0.805 0.673 44.985 -12.439 22.035 21 CC_A27G28:C37U38_CC C 27 ? C 38 ? C 28 ? C 37 ? 1 A G 27 1_555 A C 36 1_555 A C 28 1_555 A G 35 1_555 -0.383 -1.148 3.037 0.690 7.673 46.390 -2.010 0.531 2.818 9.663 -0.868 46.990 22 CC_G28C29:G36C37_CC C 28 ? C 37 ? C 29 ? C 36 ? 1 A C 28 1_555 A G 35 1_555 A C 29 1_555 A A 34 1_555 -0.010 -1.275 3.216 3.927 5.435 44.730 -2.125 0.349 3.038 7.094 -5.126 45.204 23 CC_C29C30:A35G36_CC C 29 ? C 36 ? C 30 ? C 35 ? 1 A C 29 1_555 A A 34 1_555 A G 30 1_555 A A 33 1_555 -1.552 -1.499 2.856 -3.102 2.233 39.360 -2.447 1.974 2.879 3.306 4.593 39.538 24 CC_C30G31:A34A35_CC C 30 ? C 35 ? C 31 ? C 34 ? 1 B GTP 1 1_555 B C 57 1_555 B G 2 1_555 B C 56 1_555 -0.409 -1.837 3.326 -1.488 4.293 31.886 -4.066 0.476 3.074 7.764 2.692 32.199 25 EE_GTP2G3:C57C58_EE E 2 ? E 58 ? E 3 ? E 57 ? 1 B G 2 1_555 B C 56 1_555 B U 3 1_555 B A 55 1_555 -0.349 -0.773 2.804 2.629 10.405 36.725 -2.261 0.806 2.473 16.096 -4.067 38.209 26 EE_G3U4:A56C57_EE E 3 ? E 57 ? E 4 ? E 56 ? 1 B U 3 1_555 B A 55 1_555 B U 5 1_555 B A 54 1_555 -2.964 -0.539 3.148 -4.033 -0.469 50.179 -0.601 3.198 3.366 -0.552 4.746 50.332 27 EE_U4U6:A55A56_EE E 4 ? E 56 ? E 6 ? E 55 ? 1 B U 5 1_555 B A 54 1_555 B C 6 1_555 B G 53 1_555 0.244 -1.942 3.734 -4.050 2.673 34.251 -3.727 -1.107 3.526 4.510 6.835 34.583 28 EE_U6C7:G54A55_EE E 6 ? E 55 ? E 7 ? E 54 ? 1 B C 6 1_555 B G 53 1_555 B U 7 1_555 B G 52 1_555 -0.244 -1.435 3.096 2.845 3.294 35.787 -2.751 0.768 2.930 5.336 -4.609 36.042 29 EE_C7U8:G53G54_EE E 7 ? E 54 ? E 8 ? E 53 ? 1 B U 7 1_555 B G 52 1_555 B C 8 1_555 B G 51 1_555 0.210 -1.663 2.922 4.279 12.297 27.882 -5.062 0.272 2.034 23.936 -8.330 30.718 30 EE_U8C9:G52G53_EE E 8 ? E 53 ? E 9 ? E 52 ? 1 B C 8 1_555 B G 51 1_555 B U 9 1_555 B A 50 1_555 -0.585 -1.294 3.125 -0.811 11.349 31.879 -3.865 0.889 2.543 19.888 1.421 33.799 31 EE_C9U10:A51G52_EE E 9 ? E 52 ? E 10 ? E 51 ? 1 B U 9 1_555 B A 50 1_555 B G 10 1_555 B U 49 1_555 0.633 -1.445 2.745 -3.969 15.291 25.641 -5.018 -1.800 1.545 30.989 8.043 30.048 32 EE_U10G11:U50A51_EE E 10 ? E 51 ? E 11 ? E 50 ? 1 B G 10 1_555 B U 49 1_555 B G 11 1_555 B C 48 1_555 0.171 -1.048 3.535 -0.125 5.926 41.194 -2.140 -0.255 3.359 8.370 0.176 41.600 33 EE_G11G12:C49U50_EE E 11 ? E 50 ? E 12 ? E 49 ? 1 B G 11 1_555 B C 48 1_555 B U 12 1_555 B A 47 1_555 -0.769 -1.193 3.096 1.604 4.755 32.657 -2.836 1.601 2.858 8.394 -2.831 33.030 34 EE_G12U13:A48C49_EE E 12 ? E 49 ? E 13 ? E 48 ? 1 B U 12 1_555 B A 47 1_555 B U 13 1_555 B A 46 1_555 0.520 -0.944 3.098 -0.076 7.545 32.668 -2.774 -0.914 2.815 13.195 0.134 33.505 35 EE_U13U14:A47A48_EE E 13 ? E 48 ? E 14 ? E 47 ? 1 B U 13 1_555 B A 46 1_555 B A 14 1_555 B U 45 1_555 0.219 -1.173 3.011 -1.985 10.861 30.203 -3.796 -0.701 2.436 20.022 3.658 32.113 36 EE_U14A15:U46A47_EE E 14 ? E 47 ? E 15 ? E 46 ? 1 B A 14 1_555 B U 45 1_555 B G 15 1_555 B C 44 1_555 -0.008 -1.454 3.366 3.333 9.712 34.969 -3.641 0.464 2.861 15.747 -5.403 36.400 37 EE_A15G16:C45U46_EE E 15 ? E 46 ? E 16 ? E 45 ? 1 B G 15 1_555 B C 44 1_555 B C 17 1_555 B G 43 1_555 -1.607 -1.165 2.946 2.928 7.820 48.346 -1.912 2.127 2.643 9.465 -3.544 49.019 38 EE_G16C18:G44C45_EE E 16 ? E 45 ? E 18 ? E 44 ? 1 B C 17 1_555 B G 43 1_555 B C 18 1_555 B G 42 1_555 -0.114 -1.909 3.504 -3.123 9.480 30.644 -5.116 -0.346 2.802 17.369 5.723 32.191 39 EE_C18C19:G43G44_EE E 18 ? E 44 ? E 19 ? E 43 ? 1 B C 18 1_555 B G 42 1_555 B A 19 1_555 B U 41 1_555 -0.116 -1.667 2.909 1.983 7.506 28.131 -4.659 0.586 2.381 15.082 -3.985 29.162 40 EE_C19A20:U42G43_EE E 19 ? E 43 ? E 20 ? E 42 ? 1 B A 19 1_555 B U 41 1_555 B G 20 1_555 B C 40 1_555 1.011 -1.937 3.047 1.218 4.692 20.893 -6.873 -2.286 2.607 12.719 -3.302 21.442 41 EE_A20G21:C41U42_EE E 20 ? E 42 ? E 21 ? E 41 ? 1 B G 20 1_555 B C 40 1_555 B A 21 1_555 B U 39 1_555 -0.669 -2.853 3.134 -0.779 8.279 19.801 -10.309 1.548 1.829 22.817 2.148 21.460 42 EE_G21A22:U40C41_EE E 21 ? E 41 ? E 22 ? E 40 ? 1 B A 21 1_555 B U 39 1_555 B G 25 1_555 B C 38 1_555 1.635 -2.385 3.802 1.993 18.235 61.085 -3.130 -1.459 3.098 17.522 -1.915 63.524 43 EE_A22G26:C39U40_EE E 22 ? E 40 ? E 26 ? E 39 ? 1 B G 25 1_555 B C 38 1_555 B A 26 1_555 B U 37 1_555 -0.094 -1.508 2.704 -4.686 7.660 25.472 -4.724 -0.713 2.151 16.723 10.230 26.984 44 EE_G26A27:U38C39_EE E 26 ? E 39 ? E 27 ? E 38 ? 1 B A 26 1_555 B U 37 1_555 B G 27 1_555 B C 36 1_555 -0.057 -1.731 3.205 0.816 10.519 31.833 -4.561 0.220 2.519 18.552 -1.439 33.493 45 EE_A27G28:C37U38_EE E 27 ? E 38 ? E 28 ? E 37 ? 1 B G 27 1_555 B C 36 1_555 B C 28 1_555 B G 35 1_555 0.264 -1.600 3.344 -1.355 9.935 34.251 -3.991 -0.618 2.775 16.438 2.243 35.647 46 EE_G28C29:G36C37_EE E 28 ? E 37 ? E 29 ? E 36 ? 1 B C 28 1_555 B G 35 1_555 B C 29 1_555 B A 34 1_555 0.161 -1.105 3.087 2.800 4.818 45.499 -1.808 0.018 2.966 6.201 -3.605 45.821 47 EE_C29C30:A35G36_EE E 29 ? E 36 ? E 30 ? E 35 ? 1 B C 29 1_555 B A 34 1_555 B G 30 1_555 B A 33 1_555 -1.430 -1.090 2.592 0.166 6.548 40.654 -2.094 2.049 2.390 9.351 -0.237 41.156 48 EE_C30G31:A34A35_EE E 30 ? E 35 ? E 31 ? E 34 ? 1 C GTP 1 1_555 C C 57 1_555 C G 2 1_555 C C 56 1_555 -0.127 -1.339 3.506 1.109 3.790 37.401 -2.596 0.348 3.354 5.890 -1.724 37.601 49 BB_GTP2G3:C57C58_BB B 2 ? B 58 ? B 3 ? B 57 ? 1 C G 2 1_555 C C 56 1_555 C U 3 1_555 C A 55 1_555 -0.098 -1.167 2.918 -1.424 3.673 34.487 -2.448 -0.027 2.785 6.170 2.392 34.704 50 BB_G3U4:A56C57_BB B 3 ? B 57 ? B 4 ? B 56 ? 1 C U 3 1_555 C A 55 1_555 C U 5 1_555 C A 54 1_555 -1.704 -1.312 3.178 4.976 -3.486 47.960 -1.342 2.453 3.079 -4.269 -6.093 48.320 51 BB_U4U6:A55A56_BB B 4 ? B 56 ? B 6 ? B 55 ? 1 C U 5 1_555 C A 54 1_555 C C 6 1_555 C G 53 1_555 -0.097 -1.522 3.536 -2.063 4.053 34.940 -3.151 -0.164 3.344 6.715 3.417 35.225 52 BB_U6C7:G54A55_BB B 6 ? B 55 ? B 7 ? B 54 ? 1 C C 6 1_555 C G 53 1_555 C U 7 1_555 C G 52 1_555 -0.098 -1.205 3.079 3.991 3.049 39.592 -2.092 0.571 2.958 4.479 -5.864 39.896 53 BB_C7U8:G53G54_BB B 7 ? B 54 ? B 8 ? B 53 ? 1 C U 7 1_555 C G 52 1_555 C C 8 1_555 C G 51 1_555 0.250 -1.539 2.662 6.580 14.232 23.619 -5.460 0.558 1.524 30.800 -14.240 28.288 54 BB_U8C9:G52G53_BB B 8 ? B 53 ? B 9 ? B 52 ? 1 C C 8 1_555 C G 51 1_555 C U 9 1_555 C A 50 1_555 -0.531 -1.124 3.581 -4.228 14.965 36.651 -3.474 0.267 2.961 22.590 6.383 39.709 55 BB_C9U10:A51G52_BB B 9 ? B 52 ? B 10 ? B 51 ? 1 C U 9 1_555 C A 50 1_555 C G 10 1_555 C U 49 1_555 0.407 -1.280 2.869 -2.492 8.337 26.397 -4.299 -1.337 2.317 17.657 5.278 27.770 56 BB_U10G11:U50A51_BB B 10 ? B 51 ? B 11 ? B 50 ? 1 C G 10 1_555 C U 49 1_555 C G 11 1_555 C C 48 1_555 0.289 -1.431 3.309 -2.717 13.119 34.699 -3.887 -0.793 2.589 21.051 4.360 37.121 57 BB_G11G12:C49U50_BB B 11 ? B 50 ? B 12 ? B 49 ? 1 C G 11 1_555 C C 48 1_555 C U 12 1_555 C A 47 1_555 -1.309 -1.326 3.165 -3.548 9.346 34.914 -3.357 1.637 2.843 15.195 5.769 36.275 58 BB_G12U13:A48C49_BB B 12 ? B 49 ? B 13 ? B 48 ? 1 C U 12 1_555 C A 47 1_555 C U 13 1_555 C A 46 1_555 0.406 -1.260 3.210 2.365 4.084 31.041 -3.066 -0.323 3.045 7.577 -4.387 31.389 59 BB_U13U14:A47A48_BB B 13 ? B 48 ? B 14 ? B 47 ? 1 C U 13 1_555 C A 46 1_555 C A 14 1_555 C U 45 1_555 0.283 -1.347 3.275 -3.002 7.415 31.285 -3.678 -1.016 2.850 13.475 5.456 32.267 60 BB_U14A15:U46A47_BB B 14 ? B 47 ? B 15 ? B 46 ? 1 C A 14 1_555 C U 45 1_555 C G 15 1_555 C C 44 1_555 -0.122 -1.332 3.121 2.815 1.386 34.623 -2.430 0.610 3.048 2.323 -4.717 34.761 61 BB_A15G16:C45U46_BB B 15 ? B 46 ? B 16 ? B 45 ? 1 C G 15 1_555 C C 44 1_555 C C 17 1_555 C G 43 1_555 -0.677 -1.520 3.029 8.290 0.334 44.854 -1.989 1.535 2.856 0.434 -10.756 45.576 62 BB_G16C18:G44C45_BB B 16 ? B 45 ? B 18 ? B 44 ? 1 C C 17 1_555 C G 43 1_555 C C 18 1_555 C G 42 1_555 -1.180 -2.092 3.545 -4.154 12.520 29.557 -5.945 1.396 2.606 23.143 7.679 32.307 63 BB_C18C19:G43G44_BB B 18 ? B 44 ? B 19 ? B 43 ? 1 C C 18 1_555 C G 42 1_555 C A 19 1_555 C U 41 1_555 0.698 -1.906 3.056 0.319 8.070 29.428 -5.006 -1.272 2.465 15.520 -0.613 30.493 64 BB_C19A20:U42G43_BB B 19 ? B 43 ? B 20 ? B 42 ? 1 C A 19 1_555 C U 41 1_555 C G 20 1_555 C C 40 1_555 0.322 -1.534 3.277 3.050 11.564 32.174 -4.293 -0.100 2.606 20.023 -5.281 34.270 65 BB_A20G21:C41U42_BB B 20 ? B 42 ? B 21 ? B 41 ? 1 C G 20 1_555 C C 40 1_555 C A 21 1_555 C U 39 1_555 -0.152 -1.469 3.540 1.578 10.139 34.994 -3.789 0.467 3.003 16.430 -2.557 36.423 66 BB_G21A22:U40C41_BB B 21 ? B 41 ? B 22 ? B 40 ? 1 C A 21 1_555 C U 39 1_555 C G 25 1_555 C C 38 1_555 -0.949 -1.371 3.192 2.659 5.470 45.414 -2.211 1.437 2.959 7.048 -3.426 45.798 67 BB_A22G26:C39U40_BB B 22 ? B 40 ? B 26 ? B 39 ? 1 C G 25 1_555 C C 38 1_555 C A 26 1_555 C U 37 1_555 -0.694 -2.720 2.945 -4.302 1.965 23.084 -7.247 0.421 2.788 4.845 10.607 23.557 68 BB_G26A27:U38C39_BB B 26 ? B 39 ? B 27 ? B 38 ? 1 C A 26 1_555 C U 37 1_555 C G 27 1_555 C C 36 1_555 -0.332 -2.104 3.380 0.164 0.163 27.083 -4.535 0.751 3.365 0.348 -0.350 27.084 69 BB_A27G28:C37U38_BB B 27 ? B 38 ? B 28 ? B 37 ? 1 C G 27 1_555 C C 36 1_555 C C 28 1_555 C G 35 1_555 0.172 -2.252 3.298 0.593 1.997 35.193 -4.012 -0.197 3.172 3.299 -0.979 35.253 70 BB_G28C29:G36C37_BB B 28 ? B 37 ? B 29 ? B 36 ? 1 C C 28 1_555 C G 35 1_555 C C 29 1_555 C A 34 1_555 -0.041 -1.797 3.397 1.350 4.899 37.458 -3.409 0.238 3.142 7.586 -2.091 37.789 71 BB_C29C30:A35G36_BB B 29 ? B 36 ? B 30 ? B 35 ? 1 C C 29 1_555 C A 34 1_555 C G 30 1_555 C A 33 1_555 -4.440 -1.549 2.883 1.465 -1.417 43.847 -1.956 6.061 2.787 -1.896 -1.960 43.892 72 BB_C30G31:A34A35_BB B 30 ? B 35 ? B 31 ? B 34 ? 1 D GTP 1 1_555 D C 57 1_555 D G 2 1_555 D C 56 1_555 -0.554 -1.379 3.690 1.635 6.533 37.777 -2.990 1.065 3.388 9.993 -2.501 38.351 73 DD_GTP2G3:C57C58_DD D 2 ? D 58 ? D 3 ? D 57 ? 1 D G 2 1_555 D C 56 1_555 D U 3 1_555 D A 55 1_555 0.387 -1.154 2.986 -4.151 5.388 31.907 -2.877 -1.323 2.690 9.664 7.445 32.605 74 DD_G3U4:A56C57_DD D 3 ? D 57 ? D 4 ? D 56 ? 1 D U 3 1_555 D A 55 1_555 D U 5 1_555 D A 54 1_555 -1.573 -1.131 3.200 3.885 -2.847 49.107 -1.149 2.166 3.132 -3.415 -4.661 49.328 75 DD_U4U6:A55A56_DD D 4 ? D 56 ? D 6 ? D 55 ? 1 D U 5 1_555 D A 54 1_555 D C 6 1_555 D G 53 1_555 -0.630 -1.444 3.233 0.106 5.188 33.875 -3.231 1.085 2.984 8.839 -0.181 34.258 76 DD_U6C7:G54A55_DD D 6 ? D 55 ? D 7 ? D 54 ? 1 D C 6 1_555 D G 53 1_555 D U 7 1_555 D G 52 1_555 -0.423 -1.489 3.324 -1.740 5.203 40.447 -2.704 0.416 3.131 7.483 2.503 40.802 77 DD_C7U8:G53G54_DD D 7 ? D 54 ? D 8 ? D 53 ? 1 D U 7 1_555 D G 52 1_555 D C 8 1_555 D G 51 1_555 0.568 -1.400 2.582 8.217 11.879 25.047 -4.731 0.188 1.839 24.920 -17.238 28.855 78 DD_U8C9:G52G53_DD D 8 ? D 53 ? D 9 ? D 52 ? 1 D C 8 1_555 D G 51 1_555 D U 9 1_555 D A 50 1_555 -0.551 -1.373 3.460 -4.895 12.259 32.903 -4.064 0.185 2.836 20.638 8.242 35.384 79 DD_C9U10:A51G52_DD D 9 ? D 52 ? D 10 ? D 51 ? 1 D U 9 1_555 D A 50 1_555 D G 10 1_555 D U 49 1_555 0.116 -1.260 2.933 -1.087 12.277 31.377 -3.834 -0.347 2.288 21.683 1.921 33.654 80 DD_U10G11:U50A51_DD D 10 ? D 51 ? D 11 ? D 50 ? 1 D G 10 1_555 D U 49 1_555 D G 11 1_555 D C 48 1_555 0.705 -0.947 3.351 -1.441 5.143 36.383 -2.202 -1.314 3.163 8.183 2.293 36.760 81 DD_G11G12:C49U50_DD D 11 ? D 50 ? D 12 ? D 49 ? 1 D G 11 1_555 D C 48 1_555 D U 12 1_555 D A 47 1_555 -0.986 -1.521 3.080 -1.264 7.516 29.130 -4.300 1.668 2.653 14.629 2.460 30.090 82 DD_G12U13:A48C49_DD D 12 ? D 49 ? D 13 ? D 48 ? 1 D U 12 1_555 D A 47 1_555 D U 13 1_555 D A 46 1_555 0.363 -1.300 3.130 3.112 6.356 32.975 -3.199 -0.158 2.859 11.040 -5.405 33.705 83 DD_U13U14:A47A48_DD D 13 ? D 48 ? D 14 ? D 47 ? 1 D U 13 1_555 D A 46 1_555 D A 14 1_555 D U 45 1_555 0.397 -0.921 3.157 -1.648 9.491 37.622 -2.466 -0.785 2.832 14.429 2.505 38.793 84 DD_U14A15:U46A47_DD D 14 ? D 47 ? D 15 ? D 46 ? 1 D A 14 1_555 D U 45 1_555 D G 15 1_555 D C 44 1_555 -0.907 -1.512 3.399 7.264 8.055 24.973 -5.104 3.633 2.447 17.604 -15.876 27.192 85 DD_A15G16:C45U46_DD D 15 ? D 46 ? D 16 ? D 45 ? 1 D G 15 1_555 D C 44 1_555 D C 17 1_555 D G 43 1_555 -0.462 -1.571 3.170 0.346 6.334 49.551 -2.295 0.571 2.958 7.522 -0.411 49.929 86 DD_G16C18:G44C45_DD D 16 ? D 45 ? D 18 ? D 44 ? 1 D C 17 1_555 D G 43 1_555 D C 18 1_555 D G 42 1_555 -1.367 -2.456 3.296 -6.905 11.397 24.111 -7.693 1.344 2.232 24.990 15.140 27.500 87 DD_C18C19:G43G44_DD D 18 ? D 44 ? D 19 ? D 43 ? 1 D C 18 1_555 D G 42 1_555 D A 19 1_555 D U 41 1_555 0.470 -1.789 2.829 2.517 8.458 28.171 -4.944 -0.497 2.241 16.861 -5.017 29.494 88 DD_C19A20:U42G43_DD D 19 ? D 43 ? D 20 ? D 42 ? 1 D A 19 1_555 D U 41 1_555 D G 20 1_555 D C 40 1_555 0.194 -1.657 3.571 3.348 8.842 36.223 -3.792 0.154 3.101 13.931 -5.275 37.397 89 DD_A20G21:C41U42_DD D 20 ? D 42 ? D 21 ? D 41 ? 1 D G 20 1_555 D C 40 1_555 D A 21 1_555 D U 39 1_555 -0.635 -1.279 3.147 0.855 10.612 35.180 -3.346 1.115 2.648 17.080 -1.377 36.707 90 DD_G21A22:U40C41_DD D 21 ? D 41 ? D 22 ? D 40 ? 1 D A 21 1_555 D U 39 1_555 D G 25 1_555 D C 38 1_555 -0.017 -1.643 3.167 -2.252 6.993 33.173 -3.843 -0.302 2.768 12.066 3.884 33.954 91 DD_A22G26:C39U40_DD D 22 ? D 40 ? D 26 ? D 39 ? 1 D G 25 1_555 D C 38 1_555 D A 26 1_555 D U 37 1_555 0.706 -1.200 2.995 -0.116 6.546 38.614 -2.487 -1.066 2.761 9.814 0.174 39.144 92 DD_G26A27:U38C39_DD D 26 ? D 39 ? D 27 ? D 38 ? 1 D A 26 1_555 D U 37 1_555 D G 27 1_555 D C 36 1_555 -0.183 -2.361 3.287 3.723 6.183 20.564 -8.427 1.795 2.411 16.671 -10.039 21.781 93 DD_A27G28:C37U38_DD D 27 ? D 38 ? D 28 ? D 37 ? 1 D G 27 1_555 D C 36 1_555 D C 28 1_555 D G 35 1_555 0.228 -1.794 3.241 -0.553 4.016 37.342 -3.291 -0.423 3.035 6.250 0.861 37.553 94 DD_G28C29:G36C37_DD D 28 ? D 37 ? D 29 ? D 36 ? 1 D C 28 1_555 D G 35 1_555 D C 29 1_555 D A 34 1_555 -0.835 -1.340 3.512 4.648 8.616 43.245 -2.599 1.551 3.102 11.516 -6.212 44.287 95 DD_C29C30:A35G36_DD D 29 ? D 36 ? D 30 ? D 35 ? 1 D C 29 1_555 D A 34 1_555 D G 30 1_555 D A 33 1_555 -3.434 -1.337 2.285 -3.372 1.756 44.117 -1.894 4.328 2.476 2.332 4.479 44.272 96 DD_C30G31:A34A35_DD D 30 ? D 35 ? D 31 ? D 34 ? # _pdbx_audit_support.funding_organization 'National Institutes of Health/National Institute of Diabetes and Digestive and Kidney Disease (NIH/NIDDK)' _pdbx_audit_support.country 'United States' _pdbx_audit_support.grant_number ? _pdbx_audit_support.ordinal 1 # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 9ED6 _pdbx_initial_refinement_model.details 'Another model generated in this study' # _atom_sites.entry_id 9DE5 _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.Cartn_transform_axes ? _atom_sites.fract_transf_matrix[1][1] 0.014520 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.001170 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.024682 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.008332 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C K N O P # loop_