HEADER DNA BINDING PROTEIN,LIGASE 29-AUG-24 9DFA TITLE THERMOCOCCUS GAMMATOLERANS DNA LIGASE COMPND MOL_ID: 1; COMPND 2 MOLECULE: DNA LIGASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: POLYDEOXYRIBONUCLEOTIDE SYNTHASE [ATP/NAD(+)]; COMPND 5 EC: 6.5.1.6; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: THERMOCOCCUS GAMMATOLERANS; SOURCE 3 ORGANISM_TAXID: 593117; SOURCE 4 STRAIN: EJ3; SOURCE 5 GENE: LIG, TGAM_1718; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 511693 KEYWDS ARCHAEAL LIGASE, INTERMEDIATE CONFORMATION, DNA BINDING PROTEIN, KEYWDS 2 LIGASE EXPDTA X-RAY DIFFRACTION AUTHOR E.RUDINO-PINERA,A.X.QUINTANA-ARMAS,C.CARDONA-FELIX,E.FLORES-HERNANDEZ REVDAT 1 18-MAR-26 9DFA 0 SPRSDE 18-MAR-26 9DFA 6WBO JRNL AUTH E.RUDINO-PINERA,A.X.QUINTANA-ARMAS,C.CARDONA-FELIX, JRNL AUTH 2 E.FLORES-HERNANDEZ JRNL TITL UNVEILING STRUCTURAL INTERMEDIARIES OF THE LIGATION JRNL TITL 2 MECHANISM AND CONSERVED MOBILITY PATTERNS IN ATP-DEPENDENT JRNL TITL 3 DNA LIGASES JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.17 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.20.1-4487 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.17 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 39.07 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.330 REMARK 3 COMPLETENESS FOR RANGE (%) : 91.4 REMARK 3 NUMBER OF REFLECTIONS : 41467 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.217 REMARK 3 R VALUE (WORKING SET) : 0.216 REMARK 3 FREE R VALUE : 0.258 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.630 REMARK 3 FREE R VALUE TEST SET COUNT : 1919 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 39.0700 - 5.2300 1.00 3308 131 0.1689 0.1924 REMARK 3 2 5.2300 - 4.1500 1.00 3151 166 0.1680 0.2017 REMARK 3 3 4.1500 - 3.6300 1.00 3140 131 0.1875 0.2550 REMARK 3 4 3.6300 - 3.2900 1.00 3073 164 0.2200 0.2824 REMARK 3 5 3.2900 - 3.0600 1.00 3101 131 0.2398 0.2926 REMARK 3 6 3.0600 - 2.8800 1.00 3060 176 0.2604 0.3003 REMARK 3 7 2.8800 - 2.7300 1.00 3072 132 0.2876 0.3471 REMARK 3 8 2.7300 - 2.6100 1.00 3085 140 0.3042 0.3376 REMARK 3 9 2.6100 - 2.5100 1.00 3039 153 0.3253 0.3183 REMARK 3 10 2.5100 - 2.4300 0.97 2946 158 0.3232 0.3797 REMARK 3 11 2.4300 - 2.3500 0.88 2657 150 0.3446 0.4142 REMARK 3 12 2.3500 - 2.2800 0.88 2690 112 0.3672 0.3579 REMARK 3 13 2.2800 - 2.2200 0.66 2009 99 0.3943 0.4110 REMARK 3 14 2.2200 - 2.1700 0.40 1217 76 0.4707 0.3995 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.380 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 32.910 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 58.00 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 72.05 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.009 NULL REMARK 3 ANGLE : 1.077 NULL REMARK 3 CHIRALITY : 0.056 679 REMARK 3 PLANARITY : 0.010 782 REMARK 3 DIHEDRAL : 7.339 622 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 9DFA COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 05-OCT-24. REMARK 100 THE DEPOSITION ID IS D_1000287400. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 02-JUL-22 REMARK 200 TEMPERATURE (KELVIN) : 291 REMARK 200 PH : 7 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALBA REMARK 200 BEAMLINE : XALOC REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9792 REMARK 200 MONOCHROMATOR : SI(111) CHANNEL-CUT REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 X 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS JAN 10, 2022 REMARK 200 DATA SCALING SOFTWARE : XSCALE JAN 10, 2022 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 45418 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.170 REMARK 200 RESOLUTION RANGE LOW (A) : 40.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 8.970 REMARK 200 R MERGE (I) : 0.10700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 11.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.17 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.27 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 9.11 REMARK 200 R MERGE FOR SHELL (I) : 2.64600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.8.3 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 63.20 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.34 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: HEPES 0.08M PH7, 2-PROPANOL 8.5%, PEG REMARK 280 4000 5%, [7.7MG/ML PROTEIN], MICROBATCH, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 46.32500 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 48.52500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 46.85000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 48.52500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 46.32500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 46.85000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 LYS A 567 REMARK 465 ALA A 568 REMARK 465 LYS A 569 REMARK 465 ARG A 570 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 PHE A 566 CG CD1 CD2 CE1 CE2 CZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O GLU A 338 O HOH A 701 1.92 REMARK 500 N LYS A 342 O HOH A 701 2.02 REMARK 500 O HOH A 722 O HOH A 777 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 OE1 GLU A 90 OH TYR A 325 4445 2.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 112 -73.17 -68.21 REMARK 500 ARG A 113 -141.60 71.19 REMARK 500 GLN A 114 84.05 34.20 REMARK 500 PHE A 117 -23.63 98.29 REMARK 500 ALA A 178 -163.48 -108.36 REMARK 500 ILE A 227 138.42 -33.66 REMARK 500 SER A 459 75.64 49.11 REMARK 500 GLU A 471 -165.09 -123.68 REMARK 500 LYS A 492 -72.85 -65.12 REMARK 500 MET A 493 -167.82 -70.11 REMARK 500 LEU A 494 -52.90 62.33 REMARK 500 GLU A 501 -71.26 -95.71 REMARK 500 PRO A 510 98.77 -57.74 REMARK 500 VAL A 539 -65.54 -90.05 REMARK 500 ARG A 542 64.09 -112.33 REMARK 500 GLN A 563 19.13 -153.56 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 ARG A 270 0.09 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL DBREF 9DFA A 12 570 UNP C5A7K8 C5A7K8_THEGJ 1 559 SEQADV 9DFA HIS A 11 UNP C5A7K8 EXPRESSION TAG SEQRES 1 A 560 HIS MET ARG TYR SER GLU LEU ALA GLU LEU TYR ARG ARG SEQRES 2 A 560 LEU GLU LYS THR THR LEU LYS THR LEU LYS THR LYS PHE SEQRES 3 A 560 VAL ALA ASP PHE LEU LYS LYS THR PRO ASP ASP LEU LEU SEQRES 4 A 560 GLU ILE VAL PRO TYR LEU ILE LEU GLY LYS VAL PHE PRO SEQRES 5 A 560 ASP TRP ASP GLU ARG GLU LEU GLY VAL GLY GLU LYS LEU SEQRES 6 A 560 LEU ILE LYS ALA VAL SER MET ALA THR GLY VAL PRO GLU SEQRES 7 A 560 LYS GLU ILE GLU ASN SER ILE LYS ASP THR GLY ASP LEU SEQRES 8 A 560 GLY GLU SER VAL ALA LEU ALA LEU LYS LYS ARG ARG GLN SEQRES 9 A 560 LYS SER PHE PHE SER GLN PRO LEU THR ILE LYS ARG VAL SEQRES 10 A 560 TYR ASN THR PHE VAL LYS VAL ALA GLU ALA SER GLY GLU SEQRES 11 A 560 GLY SER GLN ASP ARG LYS MET LYS TYR LEU ALA ASN LEU SEQRES 12 A 560 PHE MET ASP ALA GLY PRO GLU GLU GLY LYS TYR ILE ALA SEQRES 13 A 560 ARG THR VAL LEU GLY THR MET ARG THR GLY VAL ALA GLU SEQRES 14 A 560 GLY ILE LEU ARG ASP ALA ILE ALA GLU ALA PHE LYS VAL SEQRES 15 A 560 LYS VAL GLU LEU VAL GLU ARG ALA TYR MET LEU THR SER SEQRES 16 A 560 ASP PHE GLY TYR VAL ALA LYS ILE ALA LYS LEU GLU GLY SEQRES 17 A 560 ASN GLU GLY LEU SER LYS VAL SER ILE GLN ILE GLY LYS SEQRES 18 A 560 PRO ILE ARG PRO MET LEU ALA GLN ASN ALA ALA SER VAL SEQRES 19 A 560 LYS ASP ALA LEU ILE GLU MET GLY GLY GLU ALA ALA PHE SEQRES 20 A 560 GLU ILE LYS TYR ASP GLY ALA ARG VAL GLN VAL HIS ARG SEQRES 21 A 560 ASP GLY ASP LYS VAL ILE ILE TYR SER ARG ARG LEU GLU SEQRES 22 A 560 ASN VAL THR ARG SER ILE PRO GLU ILE VAL GLU ALA VAL SEQRES 23 A 560 LYS ALA SER LEU LYS PRO SER LYS VAL ILE VAL GLU GLY SEQRES 24 A 560 GLU LEU VAL ALA VAL GLY GLU ASN GLY ARG PRO ARG PRO SEQRES 25 A 560 PHE GLN TYR VAL LEU ARG ARG PHE ARG ARG LYS TYR ASN SEQRES 26 A 560 ILE GLU GLU MET ILE GLU LYS ILE PRO LEU GLU LEU ASN SEQRES 27 A 560 LEU PHE ASP ILE LEU TYR VAL ASN GLY GLU SER LEU ILE SEQRES 28 A 560 ASP THR LYS PHE THR GLU ARG ARG LYS ARG LEU GLU GLU SEQRES 29 A 560 SER VAL GLU GLU SER ASP LYS ILE LYS LEU ALA GLU GLN SEQRES 30 A 560 LEU VAL THR LYS LYS VAL ASP GLU ALA GLU GLU PHE TYR SEQRES 31 A 560 LYS ARG ALA LEU GLU LEU GLY HIS GLU GLY LEU MET ALA SEQRES 32 A 560 LYS ARG LEU ASP ALA ILE TYR GLU PRO GLY ASN ARG GLY SEQRES 33 A 560 LYS LYS TRP LEU LYS ILE LYS PRO THR MET GLU ASN LEU SEQRES 34 A 560 ASP LEU VAL ILE ILE GLY ALA GLU TRP GLY GLU GLY ARG SEQRES 35 A 560 ARG ALA HIS LEU LEU GLY SER PHE LEU VAL GLY ALA TYR SEQRES 36 A 560 ASP PRO GLU SER GLY GLU PHE VAL PRO VAL GLY LYS VAL SEQRES 37 A 560 GLY SER GLY PHE THR ASP GLU ASP LEU VAL GLU PHE THR SEQRES 38 A 560 LYS MET LEU LYS PRO LEU ILE ILE ARG GLU GLU GLY LYS SEQRES 39 A 560 PHE VAL GLU ILE GLU PRO LYS VAL VAL ILE GLU VAL THR SEQRES 40 A 560 TYR GLN GLU ILE GLN LYS SER PRO LYS TYR LYS SER GLY SEQRES 41 A 560 PHE ALA LEU ARG PHE PRO ARG TYR VAL ALA LEU ARG GLU SEQRES 42 A 560 ASP LYS SER PRO GLU GLU ALA ASP THR ILE GLU ARG VAL SEQRES 43 A 560 ALA GLN LEU TYR GLU LEU GLN GLU ARG PHE LYS ALA LYS SEQRES 44 A 560 ARG HET PO4 A 601 5 HET AMP A 602 22 HET PO4 A 603 5 HETNAM PO4 PHOSPHATE ION HETNAM AMP ADENOSINE MONOPHOSPHATE FORMUL 2 PO4 2(O4 P 3-) FORMUL 3 AMP C10 H14 N5 O7 P FORMUL 5 HOH *103(H2 O) HELIX 1 AA1 ARG A 13 LYS A 26 1 14 HELIX 2 AA2 LEU A 29 LYS A 43 1 15 HELIX 3 AA3 THR A 44 LEU A 49 5 6 HELIX 4 AA4 ILE A 51 LEU A 57 1 7 HELIX 5 AA5 GLY A 72 GLY A 85 1 14 HELIX 6 AA6 PRO A 87 GLY A 99 1 13 HELIX 7 AA7 ASP A 100 LYS A 111 1 12 HELIX 8 AA8 THR A 123 GLU A 136 1 14 HELIX 9 AA9 GLY A 141 ALA A 157 1 17 HELIX 10 AB1 GLY A 158 GLY A 171 1 14 HELIX 11 AB2 ALA A 178 LYS A 191 1 14 HELIX 12 AB3 LYS A 193 SER A 205 1 13 HELIX 13 AB4 ASP A 206 VAL A 225 1 20 HELIX 14 AB5 SER A 243 MET A 251 1 9 HELIX 15 AB6 VAL A 285 SER A 288 5 4 HELIX 16 AB7 ILE A 289 LEU A 300 1 12 HELIX 17 AB8 GLU A 316 GLY A 318 5 3 HELIX 18 AB9 PHE A 323 ARG A 332 1 10 HELIX 19 AC1 ASN A 335 ILE A 343 1 9 HELIX 20 AC2 LYS A 364 VAL A 376 1 13 HELIX 21 AC3 LYS A 392 LEU A 406 1 15 HELIX 22 AC4 GLU A 450 ALA A 454 5 5 HELIX 23 AC5 THR A 483 MET A 493 1 11 HELIX 24 AC6 LEU A 494 PRO A 496 5 3 HELIX 25 AC7 SER A 546 ALA A 550 5 5 HELIX 26 AC8 THR A 552 LEU A 562 1 11 SHEET 1 AA1 5 LEU A 237 ASN A 240 0 SHEET 2 AA1 5 ARG A 425 ILE A 432 1 O LYS A 431 N GLN A 239 SHEET 3 AA1 5 GLY A 410 LYS A 414 -1 N LEU A 411 O ILE A 432 SHEET 4 AA1 5 ALA A 255 LYS A 260 -1 N LYS A 260 O GLY A 410 SHEET 5 AA1 5 LEU A 388 THR A 390 -1 O LEU A 388 N PHE A 257 SHEET 1 AA2 5 LYS A 274 TYR A 278 0 SHEET 2 AA2 5 ALA A 264 ASP A 271 -1 N HIS A 269 O ILE A 276 SHEET 3 AA2 5 LYS A 304 VAL A 314 -1 O VAL A 307 N VAL A 268 SHEET 4 AA2 5 LEU A 345 VAL A 355 -1 O GLU A 346 N VAL A 312 SHEET 5 AA2 5 GLU A 358 SER A 359 -1 O GLU A 358 N VAL A 355 SHEET 1 AA3 4 PRO A 320 ARG A 321 0 SHEET 2 AA3 4 LYS A 304 VAL A 314 -1 N ALA A 313 O ARG A 321 SHEET 3 AA3 4 LEU A 345 VAL A 355 -1 O GLU A 346 N VAL A 312 SHEET 4 AA3 4 ILE A 382 LEU A 384 1 O LYS A 383 N LEU A 349 SHEET 1 AA4 5 PHE A 472 VAL A 478 0 SHEET 2 AA4 5 PHE A 460 TYR A 465 -1 N VAL A 462 O VAL A 475 SHEET 3 AA4 5 LEU A 439 ILE A 443 -1 N VAL A 442 O GLY A 463 SHEET 4 AA4 5 VAL A 513 THR A 517 -1 O VAL A 516 N LEU A 439 SHEET 5 AA4 5 ARG A 537 LEU A 541 -1 O ALA A 540 N GLU A 515 SHEET 1 AA5 4 LEU A 457 GLY A 458 0 SHEET 2 AA5 4 GLY A 445 TRP A 448 -1 N GLU A 447 O GLY A 458 SHEET 3 AA5 4 PHE A 505 ILE A 508 -1 O VAL A 506 N ALA A 446 SHEET 4 AA5 4 ILE A 498 ARG A 500 -1 N ILE A 499 O GLU A 507 SHEET 1 AA6 2 GLU A 520 LYS A 523 0 SHEET 2 AA6 2 PHE A 531 ARG A 534 -1 O ALA A 532 N GLN A 522 LINK NZ LYS A 260 P AMP A 602 1555 1555 1.65 CRYST1 92.650 93.700 97.050 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010793 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010672 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010304 0.00000 CONECT 1954 4451 CONECT 4446 4447 4448 4449 4450 CONECT 4447 4446 CONECT 4448 4446 CONECT 4449 4446 CONECT 4450 4446 CONECT 4451 1954 4452 4453 4454 CONECT 4452 4451 CONECT 4453 4451 CONECT 4454 4451 4455 CONECT 4455 4454 4456 CONECT 4456 4455 4457 4458 CONECT 4457 4456 4462 CONECT 4458 4456 4459 4460 CONECT 4459 4458 CONECT 4460 4458 4461 4462 CONECT 4461 4460 CONECT 4462 4457 4460 4463 CONECT 4463 4462 4464 4472 CONECT 4464 4463 4465 CONECT 4465 4464 4466 CONECT 4466 4465 4467 4472 CONECT 4467 4466 4468 4469 CONECT 4468 4467 CONECT 4469 4467 4470 CONECT 4470 4469 4471 CONECT 4471 4470 4472 CONECT 4472 4463 4466 4471 CONECT 4473 4474 4475 4476 4477 CONECT 4474 4473 CONECT 4475 4473 CONECT 4476 4473 CONECT 4477 4473 MASTER 298 0 3 26 25 0 0 6 4579 1 33 44 END