HEADER VIRAL PROTEIN 06-SEP-24 9DJ8 TITLE RNA-NSP9 BOUND TO THE NIRAN DOMAIN OF THE E-RTC WITH AN EMPTY G-POCKET COMPND MOL_ID: 1; COMPND 2 MOLECULE: RNA-DIRECTED RNA POLYMERASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: POL, RDRP, NON-STRUCTURAL PROTEIN 12, NSP12; COMPND 5 EC: 2.7.7.48; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: NON-STRUCTURAL PROTEIN 9; COMPND 9 CHAIN: G; COMPND 10 SYNONYM: NSP9; COMPND 11 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS SOURCE 3 2; SOURCE 4 ORGANISM_TAXID: 2697049; SOURCE 5 GENE: REP, 1A-1B; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS SOURCE 10 2; SOURCE 11 ORGANISM_TAXID: 2697049; SOURCE 12 GENE: REP, 1A-1B; SOURCE 13 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 14 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS RDRP, NSP9, NIRAN, RNA-NSP9, NSP12, RTC, VIRAL PROTEIN EXPDTA ELECTRON MICROSCOPY AUTHOR G.I.SMALL,S.A.DARST,E.A.CAMPBELL REVDAT 2 01-OCT-25 9DJ8 1 JRNL REVDAT 1 19-MAR-25 9DJ8 0 JRNL AUTH G.I.SMALL,S.A.DARST,E.A.CAMPBELL JRNL TITL THE MECHANISM FOR GTP-MEDIATED RNA CAPPING BY THE SARS-COV-2 JRNL TITL 2 NIRAN DOMAIN REMAINS UNRESOLVED. JRNL REF CELL V. 188 4456 2025 JRNL REFN ISSN 1097-4172 JRNL PMID 40570834 JRNL DOI 10.1016/J.CELL.2025.05.044 REMARK 2 REMARK 2 RESOLUTION. 2.58 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 SOFTWARE PACKAGES : NULL REMARK 3 RECONSTRUCTION SCHEMA : NULL REMARK 3 REMARK 3 EM MAP-MODEL FITTING AND REFINEMENT REMARK 3 PDB ENTRY : NULL REMARK 3 REFINEMENT SPACE : NULL REMARK 3 REFINEMENT PROTOCOL : NULL REMARK 3 REFINEMENT TARGET : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE : NULL REMARK 3 REMARK 3 FITTING PROCEDURE : NULL REMARK 3 REMARK 3 EM IMAGE RECONSTRUCTION STATISTICS REMARK 3 NOMINAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 ACTUAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 EFFECTIVE RESOLUTION (ANGSTROMS) : 2.580 REMARK 3 NUMBER OF PARTICLES : 215570 REMARK 3 CTF CORRECTION METHOD : PHASE FLIPPING AND AMPLITUDE REMARK 3 CORRECTION REMARK 3 REMARK 3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: NULL REMARK 3 REMARK 3 OTHER DETAILS: NULL REMARK 4 REMARK 4 9DJ8 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 12-SEP-24. REMARK 100 THE DEPOSITION ID IS D_1000288229. REMARK 245 REMARK 245 EXPERIMENTAL DETAILS REMARK 245 RECONSTRUCTION METHOD : SINGLE PARTICLE REMARK 245 SPECIMEN TYPE : NULL REMARK 245 REMARK 245 ELECTRON MICROSCOPE SAMPLE REMARK 245 SAMPLE TYPE : PARTICLE REMARK 245 PARTICLE TYPE : POINT REMARK 245 NAME OF SAMPLE : E-RTC WITH RNA-NSP9 BOUND TO REMARK 245 THE NIRAN DOMAIN. REMARK 245 SAMPLE CONCENTRATION (MG ML-1) : NULL REMARK 245 SAMPLE SUPPORT DETAILS : NULL REMARK 245 SAMPLE VITRIFICATION DETAILS : NULL REMARK 245 SAMPLE BUFFER : NULL REMARK 245 PH : 7.00 REMARK 245 SAMPLE DETAILS : NULL REMARK 245 REMARK 245 DATA ACQUISITION REMARK 245 DATE OF EXPERIMENT : NULL REMARK 245 NUMBER OF MICROGRAPHS-IMAGES : NULL REMARK 245 TEMPERATURE (KELVIN) : NULL REMARK 245 MICROSCOPE MODEL : FEI TITAN KRIOS REMARK 245 DETECTOR TYPE : GATAN K2 QUANTUM (4K X 4K) REMARK 245 MINIMUM DEFOCUS (NM) : 1000.00 REMARK 245 MAXIMUM DEFOCUS (NM) : 2000.00 REMARK 245 MINIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 MAXIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 NOMINAL CS : NULL REMARK 245 IMAGING MODE : BRIGHT FIELD REMARK 245 ELECTRON DOSE (ELECTRONS NM**-2) : 6000.00 REMARK 245 ILLUMINATION MODE : FLOOD BEAM REMARK 245 NOMINAL MAGNIFICATION : NULL REMARK 245 CALIBRATED MAGNIFICATION : NULL REMARK 245 SOURCE : TUNGSTEN HAIRPIN REMARK 245 ACCELERATION VOLTAGE (KV) : 300 REMARK 245 IMAGING DETAILS : NULL REMARK 247 REMARK 247 ELECTRON MICROSCOPY REMARK 247 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON REMARK 247 MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE REMARK 247 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES REMARK 247 ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION REMARK 247 OF THE STRUCTURE FACTORS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, G REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLN A 932 REMARK 465 ALA G 8 REMARK 465 LEU G 9 REMARK 465 ARG G 10 REMARK 465 GLN G 11 REMARK 465 MET G 12 REMARK 465 SER G 13 REMARK 465 CYS G 14 REMARK 465 ALA G 15 REMARK 465 ALA G 16 REMARK 465 GLY G 17 REMARK 465 THR G 18 REMARK 465 THR G 19 REMARK 465 GLN G 20 REMARK 465 THR G 21 REMARK 465 ALA G 22 REMARK 465 CYS G 23 REMARK 465 THR G 24 REMARK 465 ASP G 25 REMARK 465 ASP G 26 REMARK 465 ASN G 27 REMARK 465 ALA G 28 REMARK 465 LEU G 29 REMARK 465 ALA G 30 REMARK 465 TYR G 31 REMARK 465 TYR G 32 REMARK 465 ASN G 33 REMARK 465 THR G 34 REMARK 465 THR G 35 REMARK 465 LYS G 36 REMARK 465 GLY G 37 REMARK 465 GLY G 38 REMARK 465 ARG G 39 REMARK 465 PHE G 40 REMARK 465 VAL G 41 REMARK 465 LEU G 42 REMARK 465 ALA G 43 REMARK 465 LEU G 44 REMARK 465 LEU G 45 REMARK 465 SER G 46 REMARK 465 ASP G 47 REMARK 465 LEU G 48 REMARK 465 GLN G 49 REMARK 465 ASP G 50 REMARK 465 LEU G 51 REMARK 465 LYS G 52 REMARK 465 TRP G 53 REMARK 465 ALA G 54 REMARK 465 ARG G 55 REMARK 465 PHE G 56 REMARK 465 PRO G 57 REMARK 465 LYS G 58 REMARK 465 SER G 59 REMARK 465 ASP G 60 REMARK 465 GLY G 61 REMARK 465 THR G 62 REMARK 465 GLY G 63 REMARK 465 THR G 64 REMARK 465 ILE G 65 REMARK 465 TYR G 66 REMARK 465 THR G 67 REMARK 465 GLU G 68 REMARK 465 LEU G 69 REMARK 465 GLU G 70 REMARK 465 PRO G 71 REMARK 465 PRO G 72 REMARK 465 CYS G 73 REMARK 465 ARG G 74 REMARK 465 PHE G 75 REMARK 465 VAL G 76 REMARK 465 THR G 77 REMARK 465 ASP G 78 REMARK 465 THR G 79 REMARK 465 PRO G 80 REMARK 465 LYS G 81 REMARK 465 GLY G 82 REMARK 465 PRO G 83 REMARK 465 LYS G 84 REMARK 465 VAL G 85 REMARK 465 LYS G 86 REMARK 465 TYR G 87 REMARK 465 LEU G 88 REMARK 465 TYR G 89 REMARK 465 PHE G 90 REMARK 465 ILE G 91 REMARK 465 LYS G 92 REMARK 465 GLY G 93 REMARK 465 LEU G 94 REMARK 465 ASN G 95 REMARK 465 ASN G 96 REMARK 465 LEU G 97 REMARK 465 ASN G 98 REMARK 465 ARG G 99 REMARK 465 GLY G 100 REMARK 465 MET G 101 REMARK 465 VAL G 102 REMARK 465 LEU G 103 REMARK 465 GLY G 104 REMARK 465 SER G 105 REMARK 465 LEU G 106 REMARK 465 ALA G 107 REMARK 465 ALA G 108 REMARK 465 THR G 109 REMARK 465 VAL G 110 REMARK 465 ARG G 111 REMARK 465 LEU G 112 REMARK 465 GLN G 113 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 849 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 C SER A 759 H ASP A 760 1.05 REMARK 500 O ASP A 845 HG12 VAL A 848 1.09 REMARK 500 O SER A 759 H ASP A 760 1.49 REMARK 500 HH12 ARG A 18 OD1 ASP A 63 1.49 REMARK 500 OD1 ASP A 846 H ILE A 847 1.52 REMARK 500 OD1 ASP A 499 HH21 ARG A 513 1.54 REMARK 500 OD1 ASP A 211 H ASN A 213 1.58 REMARK 500 N ASN G 1 P AMP G 201 1.60 REMARK 500 O ASP A 845 CG1 VAL A 848 1.98 REMARK 500 O GLN A 5 ND2 ASN A 9 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 SER A 759 CB - CA - C ANGL. DEV. = -14.6 DEGREES REMARK 500 ASP A 760 C - N - CA ANGL. DEV. = 41.3 DEGREES REMARK 500 ASP A 760 N - CA - CB ANGL. DEV. = -20.9 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 15 -179.53 -67.61 REMARK 500 ASN A 39 41.85 -145.54 REMARK 500 ASP A 40 -5.38 73.25 REMARK 500 ASN A 168 67.68 63.13 REMARK 500 ASP A 218 66.31 64.95 REMARK 500 PHE A 219 32.63 -89.30 REMARK 500 ASP A 291 66.09 -104.66 REMARK 500 VAL A 398 -65.25 -104.30 REMARK 500 LYS A 438 23.00 -143.23 REMARK 500 ASP A 454 5.44 -69.88 REMARK 500 PHE A 480 60.84 -107.79 REMARK 500 ASN A 552 34.23 -98.52 REMARK 500 SER A 607 -124.64 48.71 REMARK 500 PHE A 753 88.01 -152.38 REMARK 500 SER A 759 59.22 38.55 REMARK 500 PRO A 809 154.88 -46.54 REMARK 500 ASP A 824 -17.42 83.68 REMARK 500 ILE A 847 -54.75 73.52 REMARK 500 THR A 850 -4.24 76.07 REMARK 500 ASN A 909 34.22 -99.04 REMARK 500 ASN A 911 47.78 39.47 REMARK 500 HIS A 928 106.50 -160.95 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 ARG A 74 0.14 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 AMP G 201 REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A1001 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 295 ND1 REMARK 620 2 CYS A 301 SG 100.9 REMARK 620 3 CYS A 306 SG 104.8 105.0 REMARK 620 4 CYS A 310 SG 105.3 109.4 128.3 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A1002 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 487 SG REMARK 620 2 HIS A 642 ND1 106.4 REMARK 620 3 CYS A 645 SG 113.9 93.2 REMARK 620 4 CYS A 646 SG 109.5 115.3 117.3 REMARK 620 N 1 2 3 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EMD-46936 RELATED DB: EMDB REMARK 900 RNA-NSP9 BOUND TO THE NIRAN DOMAIN OF THE E-RTC WITH AN EMPTY G- REMARK 900 POCKET DBREF 9DJ8 A 1 932 UNP P0DTD1 R1AB_SARS2 4393 5324 DBREF 9DJ8 G 1 113 UNP P0DTD1 R1AB_SARS2 4141 4253 SEQRES 1 A 932 SER ALA ASP ALA GLN SER PHE LEU ASN ARG VAL CYS GLY SEQRES 2 A 932 VAL SER ALA ALA ARG LEU THR PRO CYS GLY THR GLY THR SEQRES 3 A 932 SER THR ASP VAL VAL TYR ARG ALA PHE ASP ILE TYR ASN SEQRES 4 A 932 ASP LYS VAL ALA GLY PHE ALA LYS PHE LEU LYS THR ASN SEQRES 5 A 932 CYS CYS ARG PHE GLN GLU LYS ASP GLU ASP ASP ASN LEU SEQRES 6 A 932 ILE ASP SER TYR PHE VAL VAL LYS ARG HIS THR PHE SER SEQRES 7 A 932 ASN TYR GLN HIS GLU GLU THR ILE TYR ASN LEU LEU LYS SEQRES 8 A 932 ASP CYS PRO ALA VAL ALA LYS HIS ASP PHE PHE LYS PHE SEQRES 9 A 932 ARG ILE ASP GLY ASP MET VAL PRO HIS ILE SER ARG GLN SEQRES 10 A 932 ARG LEU THR LYS TYR THR MET ALA ASP LEU VAL TYR ALA SEQRES 11 A 932 LEU ARG HIS PHE ASP GLU GLY ASN CYS ASP THR LEU LYS SEQRES 12 A 932 GLU ILE LEU VAL THR TYR ASN CYS CYS ASP ASP ASP TYR SEQRES 13 A 932 PHE ASN LYS LYS ASP TRP TYR ASP PHE VAL GLU ASN PRO SEQRES 14 A 932 ASP ILE LEU ARG VAL TYR ALA ASN LEU GLY GLU ARG VAL SEQRES 15 A 932 ARG GLN ALA LEU LEU LYS THR VAL GLN PHE CYS ASP ALA SEQRES 16 A 932 MET ARG ASN ALA GLY ILE VAL GLY VAL LEU THR LEU ASP SEQRES 17 A 932 ASN GLN ASP LEU ASN GLY ASN TRP TYR ASP PHE GLY ASP SEQRES 18 A 932 PHE ILE GLN THR THR PRO GLY SER GLY VAL PRO VAL VAL SEQRES 19 A 932 ASP SER TYR TYR SER LEU LEU MET PRO ILE LEU THR LEU SEQRES 20 A 932 THR ARG ALA LEU THR ALA GLU SER HIS VAL ASP THR ASP SEQRES 21 A 932 LEU THR LYS PRO TYR ILE LYS TRP ASP LEU LEU LYS TYR SEQRES 22 A 932 ASP PHE THR GLU GLU ARG LEU LYS LEU PHE ASP ARG TYR SEQRES 23 A 932 PHE LYS TYR TRP ASP GLN THR TYR HIS PRO ASN CYS VAL SEQRES 24 A 932 ASN CYS LEU ASP ASP ARG CYS ILE LEU HIS CYS ALA ASN SEQRES 25 A 932 PHE ASN VAL LEU PHE SER THR VAL PHE PRO PRO THR SER SEQRES 26 A 932 PHE GLY PRO LEU VAL ARG LYS ILE PHE VAL ASP GLY VAL SEQRES 27 A 932 PRO PHE VAL VAL SER THR GLY TYR HIS PHE ARG GLU LEU SEQRES 28 A 932 GLY VAL VAL HIS ASN GLN ASP VAL ASN LEU HIS SER SER SEQRES 29 A 932 ARG LEU SER PHE LYS GLU LEU LEU VAL TYR ALA ALA ASP SEQRES 30 A 932 PRO ALA MET HIS ALA ALA SER GLY ASN LEU LEU LEU ASP SEQRES 31 A 932 LYS ARG THR THR CYS PHE SER VAL ALA ALA LEU THR ASN SEQRES 32 A 932 ASN VAL ALA PHE GLN THR VAL LYS PRO GLY ASN PHE ASN SEQRES 33 A 932 LYS ASP PHE TYR ASP PHE ALA VAL SER LYS GLY PHE PHE SEQRES 34 A 932 LYS GLU GLY SER SER VAL GLU LEU LYS HIS PHE PHE PHE SEQRES 35 A 932 ALA GLN ASP GLY ASN ALA ALA ILE SER ASP TYR ASP TYR SEQRES 36 A 932 TYR ARG TYR ASN LEU PRO THR MET CYS ASP ILE ARG GLN SEQRES 37 A 932 LEU LEU PHE VAL VAL GLU VAL VAL ASP LYS TYR PHE ASP SEQRES 38 A 932 CYS TYR ASP GLY GLY CYS ILE ASN ALA ASN GLN VAL ILE SEQRES 39 A 932 VAL ASN ASN LEU ASP LYS SER ALA GLY PHE PRO PHE ASN SEQRES 40 A 932 LYS TRP GLY LYS ALA ARG LEU TYR TYR ASP SER MET SER SEQRES 41 A 932 TYR GLU ASP GLN ASP ALA LEU PHE ALA TYR THR LYS ARG SEQRES 42 A 932 ASN VAL ILE PRO THR ILE THR GLN MET ASN LEU LYS TYR SEQRES 43 A 932 ALA ILE SER ALA LYS ASN ARG ALA ARG THR VAL ALA GLY SEQRES 44 A 932 VAL SER ILE CYS SER THR MET THR ASN ARG GLN PHE HIS SEQRES 45 A 932 GLN LYS LEU LEU LYS SER ILE ALA ALA THR ARG GLY ALA SEQRES 46 A 932 THR VAL VAL ILE GLY THR SER LYS PHE TYR GLY GLY TRP SEQRES 47 A 932 HIS ASN MET LEU LYS THR VAL TYR SER ASP VAL GLU ASN SEQRES 48 A 932 PRO HIS LEU MET GLY TRP ASP TYR PRO LYS CYS ASP ARG SEQRES 49 A 932 ALA MET PRO ASN MET LEU ARG ILE MET ALA SER LEU VAL SEQRES 50 A 932 LEU ALA ARG LYS HIS THR THR CYS CYS SER LEU SER HIS SEQRES 51 A 932 ARG PHE TYR ARG LEU ALA ASN GLU CYS ALA GLN VAL LEU SEQRES 52 A 932 SER GLU MET VAL MET CYS GLY GLY SER LEU TYR VAL LYS SEQRES 53 A 932 PRO GLY GLY THR SER SER GLY ASP ALA THR THR ALA TYR SEQRES 54 A 932 ALA ASN SER VAL PHE ASN ILE CYS GLN ALA VAL THR ALA SEQRES 55 A 932 ASN VAL ASN ALA LEU LEU SER THR ASP GLY ASN LYS ILE SEQRES 56 A 932 ALA ASP LYS TYR VAL ARG ASN LEU GLN HIS ARG LEU TYR SEQRES 57 A 932 GLU CYS LEU TYR ARG ASN ARG ASP VAL ASP THR ASP PHE SEQRES 58 A 932 VAL ASN GLU PHE TYR ALA TYR LEU ARG LYS HIS PHE SER SEQRES 59 A 932 MET MET ILE LEU SER ASP ASP ALA VAL VAL CYS PHE ASN SEQRES 60 A 932 SER THR TYR ALA SER GLN GLY LEU VAL ALA SER ILE LYS SEQRES 61 A 932 ASN PHE LYS SER VAL LEU TYR TYR GLN ASN ASN VAL PHE SEQRES 62 A 932 MET SER GLU ALA LYS CYS TRP THR GLU THR ASP LEU THR SEQRES 63 A 932 LYS GLY PRO HIS GLU PHE CYS SER GLN HIS THR MET LEU SEQRES 64 A 932 VAL LYS GLN GLY ASP ASP TYR VAL TYR LEU PRO TYR PRO SEQRES 65 A 932 ASP PRO SER ARG ILE LEU GLY ALA GLY CYS PHE VAL ASP SEQRES 66 A 932 ASP ILE VAL LYS THR ASP GLY THR LEU MET ILE GLU ARG SEQRES 67 A 932 PHE VAL SER LEU ALA ILE ASP ALA TYR PRO LEU THR LYS SEQRES 68 A 932 HIS PRO ASN GLN GLU TYR ALA ASP VAL PHE HIS LEU TYR SEQRES 69 A 932 LEU GLN TYR ILE ARG LYS LEU HIS ASP GLU LEU THR GLY SEQRES 70 A 932 HIS MET LEU ASP MET TYR SER VAL MET LEU THR ASN ASP SEQRES 71 A 932 ASN THR SER ARG TYR TRP GLU PRO GLU PHE TYR GLU ALA SEQRES 72 A 932 MET TYR THR PRO HIS THR VAL LEU GLN SEQRES 1 G 113 ASN ASN GLU LEU SER PRO VAL ALA LEU ARG GLN MET SER SEQRES 2 G 113 CYS ALA ALA GLY THR THR GLN THR ALA CYS THR ASP ASP SEQRES 3 G 113 ASN ALA LEU ALA TYR TYR ASN THR THR LYS GLY GLY ARG SEQRES 4 G 113 PHE VAL LEU ALA LEU LEU SER ASP LEU GLN ASP LEU LYS SEQRES 5 G 113 TRP ALA ARG PHE PRO LYS SER ASP GLY THR GLY THR ILE SEQRES 6 G 113 TYR THR GLU LEU GLU PRO PRO CYS ARG PHE VAL THR ASP SEQRES 7 G 113 THR PRO LYS GLY PRO LYS VAL LYS TYR LEU TYR PHE ILE SEQRES 8 G 113 LYS GLY LEU ASN ASN LEU ASN ARG GLY MET VAL LEU GLY SEQRES 9 G 113 SER LEU ALA ALA THR VAL ARG LEU GLN HET ZN A1001 1 HET ZN A1002 1 HET AMP G 201 33 HETNAM ZN ZINC ION HETNAM AMP ADENOSINE MONOPHOSPHATE FORMUL 3 ZN 2(ZN 2+) FORMUL 5 AMP C10 H14 N5 O7 P HELIX 1 AA1 SER A 1 CYS A 12 1 12 HELIX 2 AA2 THR A 76 LYS A 91 1 16 HELIX 3 AA3 THR A 123 HIS A 133 1 11 HELIX 4 AA4 CYS A 139 TYR A 149 1 11 HELIX 5 AA5 ASP A 153 LYS A 159 5 7 HELIX 6 AA6 ASP A 170 ALA A 176 1 7 HELIX 7 AA7 LEU A 178 GLY A 200 1 23 HELIX 8 AA8 THR A 206 GLN A 210 5 5 HELIX 9 AA9 VAL A 234 THR A 248 1 15 HELIX 10 AB1 LEU A 251 HIS A 256 5 6 HELIX 11 AB2 PHE A 275 PHE A 287 1 13 HELIX 12 AB3 ASN A 297 CYS A 301 5 5 HELIX 13 AB4 ASP A 303 SER A 318 1 16 HELIX 14 AB5 THR A 319 PHE A 321 5 3 HELIX 15 AB6 PRO A 322 PHE A 326 5 5 HELIX 16 AB7 SER A 367 ASP A 377 1 11 HELIX 17 AB8 ASP A 377 SER A 384 1 8 HELIX 18 AB9 ASN A 416 SER A 425 1 10 HELIX 19 AC1 ASP A 445 ASN A 447 5 3 HELIX 20 AC2 ALA A 448 ASP A 454 1 7 HELIX 21 AC3 TYR A 455 ASN A 459 5 5 HELIX 22 AC4 ASP A 465 PHE A 480 1 16 HELIX 23 AC5 ASN A 489 VAL A 493 5 5 HELIX 24 AC6 PRO A 505 TRP A 509 5 5 HELIX 25 AC7 LYS A 511 MET A 519 1 9 HELIX 26 AC8 SER A 520 THR A 531 1 12 HELIX 27 AC9 SER A 561 ALA A 581 1 21 HELIX 28 AD1 GLY A 596 SER A 607 1 12 HELIX 29 AD2 PRO A 627 ALA A 639 1 13 HELIX 30 AD3 ARG A 640 HIS A 642 5 3 HELIX 31 AD4 SER A 647 LEU A 663 1 17 HELIX 32 AD5 THR A 686 SER A 709 1 24 HELIX 33 AD6 ASP A 711 ILE A 715 5 5 HELIX 34 AD7 ASP A 717 ARG A 733 1 17 HELIX 35 AD8 ASP A 738 HIS A 752 1 15 HELIX 36 AD9 SER A 768 GLN A 773 1 6 HELIX 37 AE1 SER A 778 ASN A 791 1 14 HELIX 38 AE2 ASP A 833 CYS A 842 1 10 HELIX 39 AE3 ASP A 851 MET A 855 5 5 HELIX 40 AE4 ILE A 856 TYR A 867 1 12 HELIX 41 AE5 PRO A 868 HIS A 872 5 5 HELIX 42 AE6 ASN A 874 MET A 902 1 29 HELIX 43 AE7 THR A 912 GLU A 917 5 6 HELIX 44 AE8 PRO A 918 ALA A 923 1 6 HELIX 45 AE9 MET A 924 THR A 926 5 3 SHEET 1 AA1 5 LEU A 19 PRO A 21 0 SHEET 2 AA1 5 CYS A 54 LYS A 59 -1 O GLN A 57 N THR A 20 SHEET 3 AA1 5 LEU A 65 VAL A 72 -1 O VAL A 72 N CYS A 54 SHEET 4 AA1 5 MET A 110 LEU A 119 -1 O LEU A 119 N TYR A 69 SHEET 5 AA1 5 LYS A 98 ARG A 105 -1 N PHE A 102 O HIS A 113 SHEET 1 AA2 2 VAL A 31 TYR A 38 0 SHEET 2 AA2 2 ALA A 43 LYS A 50 -1 O ALA A 46 N PHE A 35 SHEET 1 AA3 3 ILE A 223 GLN A 224 0 SHEET 2 AA3 3 ILE A 201 VAL A 204 -1 N VAL A 202 O ILE A 223 SHEET 3 AA3 3 PRO A 232 VAL A 233 1 O VAL A 233 N GLY A 203 SHEET 1 AA4 3 GLY A 327 ARG A 331 0 SHEET 2 AA4 3 VAL A 342 PHE A 348 -1 O THR A 344 N LEU A 329 SHEET 3 AA4 3 GLY A 352 HIS A 355 -1 O GLY A 352 N PHE A 348 SHEET 1 AA5 3 VAL A 338 PRO A 339 0 SHEET 2 AA5 3 PHE A 334 VAL A 335 -1 N VAL A 335 O VAL A 338 SHEET 3 AA5 3 HIS A 362 SER A 363 1 O SER A 363 N PHE A 334 SHEET 1 AA6 6 ASN A 386 LEU A 387 0 SHEET 2 AA6 6 SER A 397 ALA A 400 -1 O ALA A 400 N ASN A 386 SHEET 3 AA6 6 SER A 672 VAL A 675 -1 O LEU A 673 N ALA A 399 SHEET 4 AA6 6 MET A 666 CYS A 669 -1 N VAL A 667 O TYR A 674 SHEET 5 AA6 6 ILE A 539 LEU A 544 1 N THR A 540 O MET A 668 SHEET 6 AA6 6 THR A 556 GLY A 559 -1 O GLY A 559 N GLN A 541 SHEET 1 AA7 2 ASN A 414 PHE A 415 0 SHEET 2 AA7 2 PHE A 843 VAL A 844 -1 O VAL A 844 N ASN A 414 SHEET 1 AA8 4 PHE A 753 ILE A 757 0 SHEET 2 AA8 4 ALA A 762 ASN A 767 -1 O CYS A 765 N SER A 754 SHEET 3 AA8 4 PRO A 612 GLY A 616 -1 N HIS A 613 O PHE A 766 SHEET 4 AA8 4 TRP A 800 GLU A 802 -1 O GLU A 802 N LEU A 614 SHEET 1 AA9 2 HIS A 816 GLN A 822 0 SHEET 2 AA9 2 ASP A 825 TYR A 831 -1 O VAL A 827 N VAL A 820 LINK ND1 HIS A 295 ZN ZN A1001 1555 1555 2.33 LINK SG CYS A 301 ZN ZN A1001 1555 1555 2.35 LINK SG CYS A 306 ZN ZN A1001 1555 1555 2.41 LINK SG CYS A 310 ZN ZN A1001 1555 1555 2.37 LINK SG CYS A 487 ZN ZN A1002 1555 1555 2.37 LINK ND1 HIS A 642 ZN ZN A1002 1555 1555 2.12 LINK SG CYS A 645 ZN ZN A1002 1555 1555 2.23 LINK SG CYS A 646 ZN ZN A1002 1555 1555 2.36 CISPEP 1 PHE A 504 PRO A 505 0 -2.80 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 TER 14721 LEU A 931 TER 14824 VAL G 7 HETATM14825 ZN ZN A1001 197.687 211.667 253.778 1.00 25.75 ZN HETATM14826 ZN ZN A1002 194.866 223.912 236.164 1.00 23.40 ZN HETATM14827 P AMP G 201 215.320 219.756 281.395 1.00 26.30 P HETATM14828 O1P AMP G 201 215.258 218.325 281.039 1.00 30.57 O HETATM14829 O2P AMP G 201 214.810 220.134 282.720 1.00 31.41 O1- HETATM14830 O5' AMP G 201 216.865 220.114 281.459 1.00 36.69 O HETATM14831 C5' AMP G 201 217.374 220.947 282.489 1.00 40.75 C HETATM14832 C4' AMP G 201 218.704 221.547 282.120 1.00 39.11 C HETATM14833 O4' AMP G 201 218.567 222.346 280.918 1.00 36.22 O HETATM14834 C3' AMP G 201 219.287 222.517 283.130 1.00 49.66 C HETATM14835 O3' AMP G 201 219.918 221.883 284.225 1.00 53.34 O HETATM14836 C2' AMP G 201 220.232 223.355 282.282 1.00 47.61 C HETATM14837 O2' AMP G 201 221.463 222.684 282.070 1.00 46.31 O HETATM14838 C1' AMP G 201 219.474 223.429 280.959 1.00 40.51 C HETATM14839 N9 AMP G 201 218.748 224.706 280.792 1.00 44.38 N HETATM14840 C8 AMP G 201 219.064 225.675 279.882 1.00 40.59 C HETATM14841 N7 AMP G 201 218.292 226.727 279.912 1.00 37.10 N HETATM14842 C5 AMP G 201 217.397 226.441 280.922 1.00 41.57 C HETATM14843 C6 AMP G 201 216.320 227.172 281.446 1.00 38.14 C HETATM14844 N6 AMP G 201 215.960 228.373 281.001 1.00 37.77 N HETATM14845 N1 AMP G 201 215.617 226.618 282.452 1.00 41.52 N HETATM14846 C2 AMP G 201 215.985 225.414 282.892 1.00 43.45 C HETATM14847 N3 AMP G 201 216.976 224.629 282.482 1.00 45.65 N HETATM14848 C4 AMP G 201 217.663 225.203 281.482 1.00 46.87 C HETATM14849 H5'1 AMP G 201 217.490 220.424 283.297 1.00 40.46 H HETATM14850 H5'2 AMP G 201 216.748 221.665 282.668 1.00 37.45 H HETATM14851 H4' AMP G 201 219.338 220.831 281.964 1.00 36.70 H HETATM14852 H3' AMP G 201 218.570 223.071 283.467 1.00 45.62 H HETATM14853 H2' AMP G 201 220.368 224.236 282.663 1.00 44.91 H HETATM14854 HO2' AMP G 201 221.906 222.690 282.784 1.00 42.90 H HETATM14855 H1' AMP G 201 220.107 223.334 280.231 1.00 34.20 H HETATM14856 H8 AMP G 201 219.770 225.588 279.287 1.00 33.46 H HETATM14857 HN61 AMP G 201 215.173 228.673 281.171 1.00 33.64 H HETATM14858 HN62 AMP G 201 216.511 228.845 280.539 1.00 34.96 H HETATM14859 H2 AMP G 201 215.470 225.073 283.585 1.00 40.37 H CONECT 473614825 CONECT 482114825 CONECT 489814825 CONECT 496314825 CONECT 772014826 CONECT1019314826 CONECT1023714826 CONECT1024714826 CONECT14825 4736 4821 4898 4963 CONECT14826 7720101931023710247 CONECT14827148281482914830 CONECT1482814827 CONECT1482914827 CONECT148301482714831 CONECT1483114830148321484914850 CONECT1483214831148331483414851 CONECT148331483214838 CONECT1483414832148351483614852 CONECT1483514834 CONECT1483614834148371483814853 CONECT148371483614854 CONECT1483814833148361483914855 CONECT14839148381484014848 CONECT14840148391484114856 CONECT148411484014842 CONECT14842148411484314848 CONECT14843148421484414845 CONECT14844148431485714858 CONECT148451484314846 CONECT14846148451484714859 CONECT148471484614848 CONECT14848148391484214847 CONECT1484914831 CONECT1485014831 CONECT1485114832 CONECT1485214834 CONECT1485314836 CONECT1485414837 CONECT1485514838 CONECT1485614840 CONECT1485714844 CONECT1485814844 CONECT1485914846 MASTER 346 0 3 45 30 0 0 6 7569 2 43 81 END