data_9DME # _entry.id 9DME # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.406 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 9DME pdb_00009dme 10.2210/pdb9dme/pdb WWPDB D_1000288406 ? ? EMDB EMD-47002 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date _pdbx_audit_revision_history.part_number 1 'Structure model' 1 0 2025-04-23 ? 2 'EM metadata' 1 0 2025-04-23 ? 3 FSC 1 0 2025-04-23 ? 4 'Half map' 1 0 2025-04-23 1 5 'Half map' 1 0 2025-04-23 2 6 Image 1 0 2025-04-23 ? 7 'Primary map' 1 0 2025-04-23 ? 8 'Structure model' 1 1 2025-05-21 ? 9 'EM metadata' 1 1 2025-05-21 ? 10 'Structure model' 1 2 2025-11-05 ? # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 2 'EM metadata' repository 'Initial release' ? ? 3 3 FSC repository 'Initial release' ? ? 4 4 'Half map' repository 'Initial release' ? ? 5 5 'Half map' repository 'Initial release' ? ? 6 6 Image repository 'Initial release' ? ? 7 7 'Primary map' repository 'Initial release' ? ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 8 'Structure model' 'Data collection' 2 9 'EM metadata' 'Data processing' 3 9 'EM metadata' 'Experimental summary' 4 10 'Structure model' 'Data collection' 5 10 'Structure model' 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 8 'Structure model' em_admin 2 8 'Structure model' em_software 3 9 'EM metadata' em_admin 4 9 'EM metadata' em_software 5 10 'Structure model' citation 6 10 'Structure model' citation_author 7 10 'Structure model' em_admin # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 8 'Structure model' '_em_admin.last_update' 2 8 'Structure model' '_em_software.name' 3 9 'EM metadata' '_em_admin.last_update' 4 9 'EM metadata' '_em_software.name' 5 10 'Structure model' '_citation.country' 6 10 'Structure model' '_citation.journal_abbrev' 7 10 'Structure model' '_citation.journal_id_CSD' 8 10 'Structure model' '_citation.journal_id_ISSN' 9 10 'Structure model' '_citation.journal_volume' 10 10 'Structure model' '_citation.page_first' 11 10 'Structure model' '_citation.page_last' 12 10 'Structure model' '_citation.pdbx_database_id_DOI' 13 10 'Structure model' '_citation.pdbx_database_id_PubMed' 14 10 'Structure model' '_citation.title' 15 10 'Structure model' '_citation.year' 16 10 'Structure model' '_em_admin.last_update' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 9DME _pdbx_database_status.recvd_initial_deposition_date 2024-09-13 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # _pdbx_database_related.db_name EMDB _pdbx_database_related.details 'Type 3 KD-mxyl filament of miniature tau macrocycle derived from 4R tauopathic fold' _pdbx_database_related.db_id EMD-47002 _pdbx_database_related.content_type 'associated EM volume' # loop_ _pdbx_contact_author.id _pdbx_contact_author.email _pdbx_contact_author.name_first _pdbx_contact_author.name_last _pdbx_contact_author.name_mi _pdbx_contact_author.role _pdbx_contact_author.identifier_ORCID 2 jdelvalle@nd.edu Juan 'Del Valle' R 'principal investigator/group leader' 0000-0002-8315-5264 3 jiang12@purdue.edu Wen Jiang ? 'principal investigator/group leader' 0000-0002-1292-2411 # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Xu, X.' 1 0009-0004-4087-3962 'Angera, J.I.' 2 0009-0003-9391-5444 'Rajewski, H.B.' 3 0000-0002-4750-0331 'Jiang, W.' 4 0000-0002-1292-2411 'Del Valle, R.J.' 5 0000-0002-8315-5264 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev Nat.Chem. _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 1755-4349 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 17 _citation.language ? _citation.page_first 865 _citation.page_last 874 _citation.title 'Macrocyclic beta-arch peptides that mimic the structure and function of disease-associated tau folds.' _citation.year 2025 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1038/s41557-025-01805-z _citation.pdbx_database_id_PubMed 40307419 _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Angera, I.J.' 1 0009-0003-9391-5444 primary 'Xu, X.' 2 0009-0004-4087-3962 primary 'Rajewski, B.H.' 3 ? primary 'Hallinan, G.I.' 4 ? primary 'Zhang, X.' 5 ? primary 'Ghetti, B.' 6 ? primary 'Vidal, R.' 7 0000-0002-5803-3871 primary 'Jiang, W.' 8 0000-0002-1292-2411 primary 'Del Valle, J.R.' 9 0000-0002-8315-5264 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn 'Microtubule-associated protein tau' 2240.647 15 ? ? ? ? 2 non-polymer syn 1,3-dimethylbenzene 106.165 15 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Neurofibrillary tangle protein,Paired helical filament-tau,PHF-tau' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code '(ACE)CDNIKHVPGGGSVQIVYKPVC(NH2)' _entity_poly.pdbx_seq_one_letter_code_can XCDNIKHVPGGGSVQIVYKPVCX _entity_poly.pdbx_strand_id J,L,A,C,D,F,G,I,M,O,K,N,E,B,H _entity_poly.pdbx_target_identifier ? # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name 1,3-dimethylbenzene _pdbx_entity_nonpoly.comp_id 8VH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ACE n 1 2 CYS n 1 3 ASP n 1 4 ASN n 1 5 ILE n 1 6 LYS n 1 7 HIS n 1 8 VAL n 1 9 PRO n 1 10 GLY n 1 11 GLY n 1 12 GLY n 1 13 SER n 1 14 VAL n 1 15 GLN n 1 16 ILE n 1 17 VAL n 1 18 TYR n 1 19 LYS n 1 20 PRO n 1 21 VAL n 1 22 CYS n 1 23 NH2 n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 23 _pdbx_entity_src_syn.organism_scientific 'Homo sapiens' _pdbx_entity_src_syn.organism_common_name human _pdbx_entity_src_syn.ncbi_taxonomy_id 9606 _pdbx_entity_src_syn.details ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 8VH non-polymer . 1,3-dimethylbenzene ? 'C8 H10' 106.165 ACE non-polymer . 'ACETYL GROUP' ? 'C2 H4 O' 44.053 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 NH2 non-polymer . 'AMINO GROUP' ? 'H2 N' 16.023 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ACE 1 293 293 ACE ACE J . n A 1 2 CYS 2 294 294 CYS CYS J . n A 1 3 ASP 3 295 295 ASP ASP J . n A 1 4 ASN 4 296 296 ASN ASN J . n A 1 5 ILE 5 297 297 ILE ILE J . n A 1 6 LYS 6 298 298 LYS LYS J . n A 1 7 HIS 7 299 299 HIS HIS J . n A 1 8 VAL 8 300 300 VAL VAL J . n A 1 9 PRO 9 301 301 PRO PRO J . n A 1 10 GLY 10 302 302 GLY GLY J . n A 1 11 GLY 11 303 303 GLY GLY J . n A 1 12 GLY 12 304 304 GLY GLY J . n A 1 13 SER 13 305 305 SER SER J . n A 1 14 VAL 14 306 306 VAL VAL J . n A 1 15 GLN 15 307 307 GLN GLN J . n A 1 16 ILE 16 308 308 ILE ILE J . n A 1 17 VAL 17 309 309 VAL VAL J . n A 1 18 TYR 18 310 310 TYR TYR J . n A 1 19 LYS 19 311 311 LYS LYS J . n A 1 20 PRO 20 312 312 PRO PRO J . n A 1 21 VAL 21 313 313 VAL VAL J . n A 1 22 CYS 22 314 314 CYS CYS J . n A 1 23 NH2 23 315 315 NH2 NH2 J . n B 1 1 ACE 1 293 293 ACE ACE L . n B 1 2 CYS 2 294 294 CYS CYS L . n B 1 3 ASP 3 295 295 ASP ASP L . n B 1 4 ASN 4 296 296 ASN ASN L . n B 1 5 ILE 5 297 297 ILE ILE L . n B 1 6 LYS 6 298 298 LYS LYS L . n B 1 7 HIS 7 299 299 HIS HIS L . n B 1 8 VAL 8 300 300 VAL VAL L . n B 1 9 PRO 9 301 301 PRO PRO L . n B 1 10 GLY 10 302 302 GLY GLY L . n B 1 11 GLY 11 303 303 GLY GLY L . n B 1 12 GLY 12 304 304 GLY GLY L . n B 1 13 SER 13 305 305 SER SER L . n B 1 14 VAL 14 306 306 VAL VAL L . n B 1 15 GLN 15 307 307 GLN GLN L . n B 1 16 ILE 16 308 308 ILE ILE L . n B 1 17 VAL 17 309 309 VAL VAL L . n B 1 18 TYR 18 310 310 TYR TYR L . n B 1 19 LYS 19 311 311 LYS LYS L . n B 1 20 PRO 20 312 312 PRO PRO L . n B 1 21 VAL 21 313 313 VAL VAL L . n B 1 22 CYS 22 314 314 CYS CYS L . n B 1 23 NH2 23 315 315 NH2 NH2 L . n C 1 1 ACE 1 293 293 ACE ACE A . n C 1 2 CYS 2 294 294 CYS CYS A . n C 1 3 ASP 3 295 295 ASP ASP A . n C 1 4 ASN 4 296 296 ASN ASN A . n C 1 5 ILE 5 297 297 ILE ILE A . n C 1 6 LYS 6 298 298 LYS LYS A . n C 1 7 HIS 7 299 299 HIS HIS A . n C 1 8 VAL 8 300 300 VAL VAL A . n C 1 9 PRO 9 301 301 PRO PRO A . n C 1 10 GLY 10 302 302 GLY GLY A . n C 1 11 GLY 11 303 303 GLY GLY A . n C 1 12 GLY 12 304 304 GLY GLY A . n C 1 13 SER 13 305 305 SER SER A . n C 1 14 VAL 14 306 306 VAL VAL A . n C 1 15 GLN 15 307 307 GLN GLN A . n C 1 16 ILE 16 308 308 ILE ILE A . n C 1 17 VAL 17 309 309 VAL VAL A . n C 1 18 TYR 18 310 310 TYR TYR A . n C 1 19 LYS 19 311 311 LYS LYS A . n C 1 20 PRO 20 312 312 PRO PRO A . n C 1 21 VAL 21 313 313 VAL VAL A . n C 1 22 CYS 22 314 314 CYS CYS A . n C 1 23 NH2 23 315 315 NH2 NH2 A . n D 1 1 ACE 1 293 293 ACE ACE C . n D 1 2 CYS 2 294 294 CYS CYS C . n D 1 3 ASP 3 295 295 ASP ASP C . n D 1 4 ASN 4 296 296 ASN ASN C . n D 1 5 ILE 5 297 297 ILE ILE C . n D 1 6 LYS 6 298 298 LYS LYS C . n D 1 7 HIS 7 299 299 HIS HIS C . n D 1 8 VAL 8 300 300 VAL VAL C . n D 1 9 PRO 9 301 301 PRO PRO C . n D 1 10 GLY 10 302 302 GLY GLY C . n D 1 11 GLY 11 303 303 GLY GLY C . n D 1 12 GLY 12 304 304 GLY GLY C . n D 1 13 SER 13 305 305 SER SER C . n D 1 14 VAL 14 306 306 VAL VAL C . n D 1 15 GLN 15 307 307 GLN GLN C . n D 1 16 ILE 16 308 308 ILE ILE C . n D 1 17 VAL 17 309 309 VAL VAL C . n D 1 18 TYR 18 310 310 TYR TYR C . n D 1 19 LYS 19 311 311 LYS LYS C . n D 1 20 PRO 20 312 312 PRO PRO C . n D 1 21 VAL 21 313 313 VAL VAL C . n D 1 22 CYS 22 314 314 CYS CYS C . n D 1 23 NH2 23 315 315 NH2 NH2 C . n E 1 1 ACE 1 293 293 ACE ACE D . n E 1 2 CYS 2 294 294 CYS CYS D . n E 1 3 ASP 3 295 295 ASP ASP D . n E 1 4 ASN 4 296 296 ASN ASN D . n E 1 5 ILE 5 297 297 ILE ILE D . n E 1 6 LYS 6 298 298 LYS LYS D . n E 1 7 HIS 7 299 299 HIS HIS D . n E 1 8 VAL 8 300 300 VAL VAL D . n E 1 9 PRO 9 301 301 PRO PRO D . n E 1 10 GLY 10 302 302 GLY GLY D . n E 1 11 GLY 11 303 303 GLY GLY D . n E 1 12 GLY 12 304 304 GLY GLY D . n E 1 13 SER 13 305 305 SER SER D . n E 1 14 VAL 14 306 306 VAL VAL D . n E 1 15 GLN 15 307 307 GLN GLN D . n E 1 16 ILE 16 308 308 ILE ILE D . n E 1 17 VAL 17 309 309 VAL VAL D . n E 1 18 TYR 18 310 310 TYR TYR D . n E 1 19 LYS 19 311 311 LYS LYS D . n E 1 20 PRO 20 312 312 PRO PRO D . n E 1 21 VAL 21 313 313 VAL VAL D . n E 1 22 CYS 22 314 314 CYS CYS D . n E 1 23 NH2 23 315 315 NH2 NH2 D . n F 1 1 ACE 1 293 293 ACE ACE F . n F 1 2 CYS 2 294 294 CYS CYS F . n F 1 3 ASP 3 295 295 ASP ASP F . n F 1 4 ASN 4 296 296 ASN ASN F . n F 1 5 ILE 5 297 297 ILE ILE F . n F 1 6 LYS 6 298 298 LYS LYS F . n F 1 7 HIS 7 299 299 HIS HIS F . n F 1 8 VAL 8 300 300 VAL VAL F . n F 1 9 PRO 9 301 301 PRO PRO F . n F 1 10 GLY 10 302 302 GLY GLY F . n F 1 11 GLY 11 303 303 GLY GLY F . n F 1 12 GLY 12 304 304 GLY GLY F . n F 1 13 SER 13 305 305 SER SER F . n F 1 14 VAL 14 306 306 VAL VAL F . n F 1 15 GLN 15 307 307 GLN GLN F . n F 1 16 ILE 16 308 308 ILE ILE F . n F 1 17 VAL 17 309 309 VAL VAL F . n F 1 18 TYR 18 310 310 TYR TYR F . n F 1 19 LYS 19 311 311 LYS LYS F . n F 1 20 PRO 20 312 312 PRO PRO F . n F 1 21 VAL 21 313 313 VAL VAL F . n F 1 22 CYS 22 314 314 CYS CYS F . n F 1 23 NH2 23 315 315 NH2 NH2 F . n G 1 1 ACE 1 293 293 ACE ACE G . n G 1 2 CYS 2 294 294 CYS CYS G . n G 1 3 ASP 3 295 295 ASP ASP G . n G 1 4 ASN 4 296 296 ASN ASN G . n G 1 5 ILE 5 297 297 ILE ILE G . n G 1 6 LYS 6 298 298 LYS LYS G . n G 1 7 HIS 7 299 299 HIS HIS G . n G 1 8 VAL 8 300 300 VAL VAL G . n G 1 9 PRO 9 301 301 PRO PRO G . n G 1 10 GLY 10 302 302 GLY GLY G . n G 1 11 GLY 11 303 303 GLY GLY G . n G 1 12 GLY 12 304 304 GLY GLY G . n G 1 13 SER 13 305 305 SER SER G . n G 1 14 VAL 14 306 306 VAL VAL G . n G 1 15 GLN 15 307 307 GLN GLN G . n G 1 16 ILE 16 308 308 ILE ILE G . n G 1 17 VAL 17 309 309 VAL VAL G . n G 1 18 TYR 18 310 310 TYR TYR G . n G 1 19 LYS 19 311 311 LYS LYS G . n G 1 20 PRO 20 312 312 PRO PRO G . n G 1 21 VAL 21 313 313 VAL VAL G . n G 1 22 CYS 22 314 314 CYS CYS G . n G 1 23 NH2 23 315 315 NH2 NH2 G . n H 1 1 ACE 1 293 293 ACE ACE I . n H 1 2 CYS 2 294 294 CYS CYS I . n H 1 3 ASP 3 295 295 ASP ASP I . n H 1 4 ASN 4 296 296 ASN ASN I . n H 1 5 ILE 5 297 297 ILE ILE I . n H 1 6 LYS 6 298 298 LYS LYS I . n H 1 7 HIS 7 299 299 HIS HIS I . n H 1 8 VAL 8 300 300 VAL VAL I . n H 1 9 PRO 9 301 301 PRO PRO I . n H 1 10 GLY 10 302 302 GLY GLY I . n H 1 11 GLY 11 303 303 GLY GLY I . n H 1 12 GLY 12 304 304 GLY GLY I . n H 1 13 SER 13 305 305 SER SER I . n H 1 14 VAL 14 306 306 VAL VAL I . n H 1 15 GLN 15 307 307 GLN GLN I . n H 1 16 ILE 16 308 308 ILE ILE I . n H 1 17 VAL 17 309 309 VAL VAL I . n H 1 18 TYR 18 310 310 TYR TYR I . n H 1 19 LYS 19 311 311 LYS LYS I . n H 1 20 PRO 20 312 312 PRO PRO I . n H 1 21 VAL 21 313 313 VAL VAL I . n H 1 22 CYS 22 314 314 CYS CYS I . n H 1 23 NH2 23 315 315 NH2 NH2 I . n I 1 1 ACE 1 293 293 ACE ACE M . n I 1 2 CYS 2 294 294 CYS CYS M . n I 1 3 ASP 3 295 295 ASP ASP M . n I 1 4 ASN 4 296 296 ASN ASN M . n I 1 5 ILE 5 297 297 ILE ILE M . n I 1 6 LYS 6 298 298 LYS LYS M . n I 1 7 HIS 7 299 299 HIS HIS M . n I 1 8 VAL 8 300 300 VAL VAL M . n I 1 9 PRO 9 301 301 PRO PRO M . n I 1 10 GLY 10 302 302 GLY GLY M . n I 1 11 GLY 11 303 303 GLY GLY M . n I 1 12 GLY 12 304 304 GLY GLY M . n I 1 13 SER 13 305 305 SER SER M . n I 1 14 VAL 14 306 306 VAL VAL M . n I 1 15 GLN 15 307 307 GLN GLN M . n I 1 16 ILE 16 308 308 ILE ILE M . n I 1 17 VAL 17 309 309 VAL VAL M . n I 1 18 TYR 18 310 310 TYR TYR M . n I 1 19 LYS 19 311 311 LYS LYS M . n I 1 20 PRO 20 312 312 PRO PRO M . n I 1 21 VAL 21 313 313 VAL VAL M . n I 1 22 CYS 22 314 314 CYS CYS M . n I 1 23 NH2 23 315 315 NH2 NH2 M . n J 1 1 ACE 1 293 293 ACE ACE O . n J 1 2 CYS 2 294 294 CYS CYS O . n J 1 3 ASP 3 295 295 ASP ASP O . n J 1 4 ASN 4 296 296 ASN ASN O . n J 1 5 ILE 5 297 297 ILE ILE O . n J 1 6 LYS 6 298 298 LYS LYS O . n J 1 7 HIS 7 299 299 HIS HIS O . n J 1 8 VAL 8 300 300 VAL VAL O . n J 1 9 PRO 9 301 301 PRO PRO O . n J 1 10 GLY 10 302 302 GLY GLY O . n J 1 11 GLY 11 303 303 GLY GLY O . n J 1 12 GLY 12 304 304 GLY GLY O . n J 1 13 SER 13 305 305 SER SER O . n J 1 14 VAL 14 306 306 VAL VAL O . n J 1 15 GLN 15 307 307 GLN GLN O . n J 1 16 ILE 16 308 308 ILE ILE O . n J 1 17 VAL 17 309 309 VAL VAL O . n J 1 18 TYR 18 310 310 TYR TYR O . n J 1 19 LYS 19 311 311 LYS LYS O . n J 1 20 PRO 20 312 312 PRO PRO O . n J 1 21 VAL 21 313 313 VAL VAL O . n J 1 22 CYS 22 314 314 CYS CYS O . n J 1 23 NH2 23 315 315 NH2 NH2 O . n K 1 1 ACE 1 293 293 ACE ACE K . n K 1 2 CYS 2 294 294 CYS CYS K . n K 1 3 ASP 3 295 295 ASP ASP K . n K 1 4 ASN 4 296 296 ASN ASN K . n K 1 5 ILE 5 297 297 ILE ILE K . n K 1 6 LYS 6 298 298 LYS LYS K . n K 1 7 HIS 7 299 299 HIS HIS K . n K 1 8 VAL 8 300 300 VAL VAL K . n K 1 9 PRO 9 301 301 PRO PRO K . n K 1 10 GLY 10 302 302 GLY GLY K . n K 1 11 GLY 11 303 303 GLY GLY K . n K 1 12 GLY 12 304 304 GLY GLY K . n K 1 13 SER 13 305 305 SER SER K . n K 1 14 VAL 14 306 306 VAL VAL K . n K 1 15 GLN 15 307 307 GLN GLN K . n K 1 16 ILE 16 308 308 ILE ILE K . n K 1 17 VAL 17 309 309 VAL VAL K . n K 1 18 TYR 18 310 310 TYR TYR K . n K 1 19 LYS 19 311 311 LYS LYS K . n K 1 20 PRO 20 312 312 PRO PRO K . n K 1 21 VAL 21 313 313 VAL VAL K . n K 1 22 CYS 22 314 314 CYS CYS K . n K 1 23 NH2 23 315 315 NH2 NH2 K . n L 1 1 ACE 1 293 293 ACE ACE N . n L 1 2 CYS 2 294 294 CYS CYS N . n L 1 3 ASP 3 295 295 ASP ASP N . n L 1 4 ASN 4 296 296 ASN ASN N . n L 1 5 ILE 5 297 297 ILE ILE N . n L 1 6 LYS 6 298 298 LYS LYS N . n L 1 7 HIS 7 299 299 HIS HIS N . n L 1 8 VAL 8 300 300 VAL VAL N . n L 1 9 PRO 9 301 301 PRO PRO N . n L 1 10 GLY 10 302 302 GLY GLY N . n L 1 11 GLY 11 303 303 GLY GLY N . n L 1 12 GLY 12 304 304 GLY GLY N . n L 1 13 SER 13 305 305 SER SER N . n L 1 14 VAL 14 306 306 VAL VAL N . n L 1 15 GLN 15 307 307 GLN GLN N . n L 1 16 ILE 16 308 308 ILE ILE N . n L 1 17 VAL 17 309 309 VAL VAL N . n L 1 18 TYR 18 310 310 TYR TYR N . n L 1 19 LYS 19 311 311 LYS LYS N . n L 1 20 PRO 20 312 312 PRO PRO N . n L 1 21 VAL 21 313 313 VAL VAL N . n L 1 22 CYS 22 314 314 CYS CYS N . n L 1 23 NH2 23 315 315 NH2 NH2 N . n M 1 1 ACE 1 293 293 ACE ACE E . n M 1 2 CYS 2 294 294 CYS CYS E . n M 1 3 ASP 3 295 295 ASP ASP E . n M 1 4 ASN 4 296 296 ASN ASN E . n M 1 5 ILE 5 297 297 ILE ILE E . n M 1 6 LYS 6 298 298 LYS LYS E . n M 1 7 HIS 7 299 299 HIS HIS E . n M 1 8 VAL 8 300 300 VAL VAL E . n M 1 9 PRO 9 301 301 PRO PRO E . n M 1 10 GLY 10 302 302 GLY GLY E . n M 1 11 GLY 11 303 303 GLY GLY E . n M 1 12 GLY 12 304 304 GLY GLY E . n M 1 13 SER 13 305 305 SER SER E . n M 1 14 VAL 14 306 306 VAL VAL E . n M 1 15 GLN 15 307 307 GLN GLN E . n M 1 16 ILE 16 308 308 ILE ILE E . n M 1 17 VAL 17 309 309 VAL VAL E . n M 1 18 TYR 18 310 310 TYR TYR E . n M 1 19 LYS 19 311 311 LYS LYS E . n M 1 20 PRO 20 312 312 PRO PRO E . n M 1 21 VAL 21 313 313 VAL VAL E . n M 1 22 CYS 22 314 314 CYS CYS E . n M 1 23 NH2 23 315 315 NH2 NH2 E . n N 1 1 ACE 1 293 293 ACE ACE B . n N 1 2 CYS 2 294 294 CYS CYS B . n N 1 3 ASP 3 295 295 ASP ASP B . n N 1 4 ASN 4 296 296 ASN ASN B . n N 1 5 ILE 5 297 297 ILE ILE B . n N 1 6 LYS 6 298 298 LYS LYS B . n N 1 7 HIS 7 299 299 HIS HIS B . n N 1 8 VAL 8 300 300 VAL VAL B . n N 1 9 PRO 9 301 301 PRO PRO B . n N 1 10 GLY 10 302 302 GLY GLY B . n N 1 11 GLY 11 303 303 GLY GLY B . n N 1 12 GLY 12 304 304 GLY GLY B . n N 1 13 SER 13 305 305 SER SER B . n N 1 14 VAL 14 306 306 VAL VAL B . n N 1 15 GLN 15 307 307 GLN GLN B . n N 1 16 ILE 16 308 308 ILE ILE B . n N 1 17 VAL 17 309 309 VAL VAL B . n N 1 18 TYR 18 310 310 TYR TYR B . n N 1 19 LYS 19 311 311 LYS LYS B . n N 1 20 PRO 20 312 312 PRO PRO B . n N 1 21 VAL 21 313 313 VAL VAL B . n N 1 22 CYS 22 314 314 CYS CYS B . n N 1 23 NH2 23 315 315 NH2 NH2 B . n O 1 1 ACE 1 293 293 ACE ACE H . n O 1 2 CYS 2 294 294 CYS CYS H . n O 1 3 ASP 3 295 295 ASP ASP H . n O 1 4 ASN 4 296 296 ASN ASN H . n O 1 5 ILE 5 297 297 ILE ILE H . n O 1 6 LYS 6 298 298 LYS LYS H . n O 1 7 HIS 7 299 299 HIS HIS H . n O 1 8 VAL 8 300 300 VAL VAL H . n O 1 9 PRO 9 301 301 PRO PRO H . n O 1 10 GLY 10 302 302 GLY GLY H . n O 1 11 GLY 11 303 303 GLY GLY H . n O 1 12 GLY 12 304 304 GLY GLY H . n O 1 13 SER 13 305 305 SER SER H . n O 1 14 VAL 14 306 306 VAL VAL H . n O 1 15 GLN 15 307 307 GLN GLN H . n O 1 16 ILE 16 308 308 ILE ILE H . n O 1 17 VAL 17 309 309 VAL VAL H . n O 1 18 TYR 18 310 310 TYR TYR H . n O 1 19 LYS 19 311 311 LYS LYS H . n O 1 20 PRO 20 312 312 PRO PRO H . n O 1 21 VAL 21 313 313 VAL VAL H . n O 1 22 CYS 22 314 314 CYS CYS H . n O 1 23 NH2 23 315 315 NH2 NH2 H . n # loop_ _pdbx_entity_instance_feature.ordinal _pdbx_entity_instance_feature.comp_id _pdbx_entity_instance_feature.asym_id _pdbx_entity_instance_feature.seq_num _pdbx_entity_instance_feature.auth_comp_id _pdbx_entity_instance_feature.auth_asym_id _pdbx_entity_instance_feature.auth_seq_num _pdbx_entity_instance_feature.feature_type _pdbx_entity_instance_feature.details 1 8VH ? ? 8VH ? ? 'SUBJECT OF INVESTIGATION' ? 2 ACE ? ? ACE ? ? 'SUBJECT OF INVESTIGATION' ? 3 NH2 ? ? NH2 ? ? 'SUBJECT OF INVESTIGATION' ? # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code P 2 8VH 1 401 316 8VH 8VH J . Q 2 8VH 1 401 316 8VH 8VH L . R 2 8VH 1 401 316 8VH 8VH A . S 2 8VH 1 401 316 8VH 8VH C . T 2 8VH 1 401 316 8VH 8VH D . U 2 8VH 1 401 316 8VH 8VH F . V 2 8VH 1 401 316 8VH 8VH G . W 2 8VH 1 401 316 8VH 8VH I . X 2 8VH 1 401 316 8VH 8VH M . Y 2 8VH 1 401 316 8VH 8VH O . Z 2 8VH 1 401 316 8VH 8VH K . AA 2 8VH 1 401 316 8VH 8VH N . BA 2 8VH 1 401 316 8VH 8VH E . CA 2 8VH 1 401 316 8VH 8VH B . DA 2 8VH 1 401 316 8VH 8VH H . # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 9DME _cell.details ? _cell.formula_units_Z ? _cell.length_a 1.00 _cell.length_a_esd ? _cell.length_b 1.00 _cell.length_b_esd ? _cell.length_c 1.00 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB ? _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 9DME _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 9DME _exptl.crystals_number ? _exptl.details ? _exptl.method 'ELECTRON MICROSCOPY' _exptl.method_details ? # _refine.pdbx_refine_id 'ELECTRON MICROSCOPY' _refine.entry_id 9DME _refine.pdbx_diffrn_id ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs ? _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low ? _refine.ls_d_res_high . _refine.ls_percent_reflns_obs ? _refine.ls_R_factor_obs ? _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work ? _refine.ls_R_factor_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_reflns_R_free ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'ELECTRON MICROSCOPY' ? 0.004 ? 2505 ? f_bond_d ? ? 'ELECTRON MICROSCOPY' ? 0.745 ? 3375 ? f_angle_d ? ? 'ELECTRON MICROSCOPY' ? 8.296 ? 885 ? f_dihedral_angle_d ? ? 'ELECTRON MICROSCOPY' ? 0.067 ? 360 ? f_chiral_restr ? ? 'ELECTRON MICROSCOPY' ? 0.007 ? 435 ? f_plane_restr ? ? # _struct.entry_id 9DME _struct.title 'Type 3 KD-mxyl filament of miniature tau macrocycle derived from 4R tauopathic fold' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 9DME _struct_keywords.text 'tauopathies, neurodegenerative disorders, seed-competent miniature tau macrocycle, PROTEIN FIBRIL' _struct_keywords.pdbx_keywords 'PROTEIN FIBRIL' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 1 ? D N N 1 ? E N N 1 ? F N N 1 ? G N N 1 ? H N N 1 ? I N N 1 ? J N N 1 ? K N N 1 ? L N N 1 ? M N N 1 ? N N N 1 ? O N N 1 ? P N N 2 ? Q N N 2 ? R N N 2 ? S N N 2 ? T N N 2 ? U N N 2 ? V N N 2 ? W N N 2 ? X N N 2 ? Y N N 2 ? Z N N 2 ? AA N N 2 ? BA N N 2 ? CA N N 2 ? DA N N 2 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code TAU_HUMAN _struct_ref.pdbx_db_accession P10636 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code DNIKHVPGGGSVQIVYKPV _struct_ref.pdbx_align_begin 612 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 9DME J 3 ? 21 ? P10636 612 ? 630 ? 295 313 2 1 9DME L 3 ? 21 ? P10636 612 ? 630 ? 295 313 3 1 9DME A 3 ? 21 ? P10636 612 ? 630 ? 295 313 4 1 9DME C 3 ? 21 ? P10636 612 ? 630 ? 295 313 5 1 9DME D 3 ? 21 ? P10636 612 ? 630 ? 295 313 6 1 9DME F 3 ? 21 ? P10636 612 ? 630 ? 295 313 7 1 9DME G 3 ? 21 ? P10636 612 ? 630 ? 295 313 8 1 9DME I 3 ? 21 ? P10636 612 ? 630 ? 295 313 9 1 9DME M 3 ? 21 ? P10636 612 ? 630 ? 295 313 10 1 9DME O 3 ? 21 ? P10636 612 ? 630 ? 295 313 11 1 9DME K 3 ? 21 ? P10636 612 ? 630 ? 295 313 12 1 9DME N 3 ? 21 ? P10636 612 ? 630 ? 295 313 13 1 9DME E 3 ? 21 ? P10636 612 ? 630 ? 295 313 14 1 9DME B 3 ? 21 ? P10636 612 ? 630 ? 295 313 15 1 9DME H 3 ? 21 ? P10636 612 ? 630 ? 295 313 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 9DME ACE J 1 ? UNP P10636 ? ? 'expression tag' 293 1 1 9DME CYS J 2 ? UNP P10636 ? ? 'expression tag' 294 2 1 9DME CYS J 22 ? UNP P10636 ? ? 'expression tag' 314 3 2 9DME ACE L 1 ? UNP P10636 ? ? 'expression tag' 293 4 2 9DME CYS L 2 ? UNP P10636 ? ? 'expression tag' 294 5 2 9DME CYS L 22 ? UNP P10636 ? ? 'expression tag' 314 6 3 9DME ACE A 1 ? UNP P10636 ? ? 'expression tag' 293 7 3 9DME CYS A 2 ? UNP P10636 ? ? 'expression tag' 294 8 3 9DME CYS A 22 ? UNP P10636 ? ? 'expression tag' 314 9 4 9DME ACE C 1 ? UNP P10636 ? ? 'expression tag' 293 10 4 9DME CYS C 2 ? UNP P10636 ? ? 'expression tag' 294 11 4 9DME CYS C 22 ? UNP P10636 ? ? 'expression tag' 314 12 5 9DME ACE D 1 ? UNP P10636 ? ? 'expression tag' 293 13 5 9DME CYS D 2 ? UNP P10636 ? ? 'expression tag' 294 14 5 9DME CYS D 22 ? UNP P10636 ? ? 'expression tag' 314 15 6 9DME ACE F 1 ? UNP P10636 ? ? 'expression tag' 293 16 6 9DME CYS F 2 ? UNP P10636 ? ? 'expression tag' 294 17 6 9DME CYS F 22 ? UNP P10636 ? ? 'expression tag' 314 18 7 9DME ACE G 1 ? UNP P10636 ? ? 'expression tag' 293 19 7 9DME CYS G 2 ? UNP P10636 ? ? 'expression tag' 294 20 7 9DME CYS G 22 ? UNP P10636 ? ? 'expression tag' 314 21 8 9DME ACE I 1 ? UNP P10636 ? ? 'expression tag' 293 22 8 9DME CYS I 2 ? UNP P10636 ? ? 'expression tag' 294 23 8 9DME CYS I 22 ? UNP P10636 ? ? 'expression tag' 314 24 9 9DME ACE M 1 ? UNP P10636 ? ? 'expression tag' 293 25 9 9DME CYS M 2 ? UNP P10636 ? ? 'expression tag' 294 26 9 9DME CYS M 22 ? UNP P10636 ? ? 'expression tag' 314 27 10 9DME ACE O 1 ? UNP P10636 ? ? 'expression tag' 293 28 10 9DME CYS O 2 ? UNP P10636 ? ? 'expression tag' 294 29 10 9DME CYS O 22 ? UNP P10636 ? ? 'expression tag' 314 30 11 9DME ACE K 1 ? UNP P10636 ? ? 'expression tag' 293 31 11 9DME CYS K 2 ? UNP P10636 ? ? 'expression tag' 294 32 11 9DME CYS K 22 ? UNP P10636 ? ? 'expression tag' 314 33 12 9DME ACE N 1 ? UNP P10636 ? ? 'expression tag' 293 34 12 9DME CYS N 2 ? UNP P10636 ? ? 'expression tag' 294 35 12 9DME CYS N 22 ? UNP P10636 ? ? 'expression tag' 314 36 13 9DME ACE E 1 ? UNP P10636 ? ? 'expression tag' 293 37 13 9DME CYS E 2 ? UNP P10636 ? ? 'expression tag' 294 38 13 9DME CYS E 22 ? UNP P10636 ? ? 'expression tag' 314 39 14 9DME ACE B 1 ? UNP P10636 ? ? 'expression tag' 293 40 14 9DME CYS B 2 ? UNP P10636 ? ? 'expression tag' 294 41 14 9DME CYS B 22 ? UNP P10636 ? ? 'expression tag' 314 42 15 9DME ACE H 1 ? UNP P10636 ? ? 'expression tag' 293 43 15 9DME CYS H 2 ? UNP P10636 ? ? 'expression tag' 294 44 15 9DME CYS H 22 ? UNP P10636 ? ? 'expression tag' 314 45 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details pentadecameric _pdbx_struct_assembly.oligomeric_count 15 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'electron microscopy' _pdbx_struct_assembly_auth_evidence.details 'not applicable' # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A ACE 1 C ? ? ? 1_555 A CYS 2 N ? ? J ACE 293 J CYS 294 1_555 ? ? ? ? ? ? ? 1.333 ? ? covale2 covale none ? A CYS 2 SG ? ? ? 1_555 P 8VH . C08 ? ? J CYS 294 J 8VH 401 1_555 ? ? ? ? ? ? ? 1.766 ? ? covale3 covale both ? A CYS 22 C ? ? ? 1_555 A NH2 23 N ? ? J CYS 314 J NH2 315 1_555 ? ? ? ? ? ? ? 1.357 ? ? covale4 covale none ? A CYS 22 SG ? ? ? 1_555 P 8VH . C07 ? ? J CYS 314 J 8VH 401 1_555 ? ? ? ? ? ? ? 1.766 ? ? covale5 covale both ? B ACE 1 C ? ? ? 1_555 B CYS 2 N ? ? L ACE 293 L CYS 294 1_555 ? ? ? ? ? ? ? 1.332 ? ? covale6 covale none ? B CYS 2 SG ? ? ? 1_555 Q 8VH . C08 ? ? L CYS 294 L 8VH 401 1_555 ? ? ? ? ? ? ? 1.766 ? ? covale7 covale both ? B CYS 22 C ? ? ? 1_555 B NH2 23 N ? ? L CYS 314 L NH2 315 1_555 ? ? ? ? ? ? ? 1.334 ? ? covale8 covale none ? B CYS 22 SG ? ? ? 1_555 Q 8VH . C07 ? ? L CYS 314 L 8VH 401 1_555 ? ? ? ? ? ? ? 1.765 ? ? covale9 covale both ? C ACE 1 C ? ? ? 1_555 C CYS 2 N ? ? A ACE 293 A CYS 294 1_555 ? ? ? ? ? ? ? 1.333 ? ? covale10 covale none ? C CYS 2 SG ? ? ? 1_555 R 8VH . C08 ? ? A CYS 294 A 8VH 401 1_555 ? ? ? ? ? ? ? 1.766 ? ? covale11 covale both ? C CYS 22 C ? ? ? 1_555 C NH2 23 N ? ? A CYS 314 A NH2 315 1_555 ? ? ? ? ? ? ? 1.367 ? ? covale12 covale none ? C CYS 22 SG ? ? ? 1_555 R 8VH . C07 ? ? A CYS 314 A 8VH 401 1_555 ? ? ? ? ? ? ? 1.766 ? ? covale13 covale both ? D ACE 1 C ? ? ? 1_555 D CYS 2 N ? ? C ACE 293 C CYS 294 1_555 ? ? ? ? ? ? ? 1.333 ? ? covale14 covale none ? D CYS 2 SG ? ? ? 1_555 S 8VH . C08 ? ? C CYS 294 C 8VH 401 1_555 ? ? ? ? ? ? ? 1.766 ? ? covale15 covale both ? D CYS 22 C ? ? ? 1_555 D NH2 23 N ? ? C CYS 314 C NH2 315 1_555 ? ? ? ? ? ? ? 1.334 ? ? covale16 covale none ? D CYS 22 SG ? ? ? 1_555 S 8VH . C07 ? ? C CYS 314 C 8VH 401 1_555 ? ? ? ? ? ? ? 1.766 ? ? covale17 covale both ? E ACE 1 C ? ? ? 1_555 E CYS 2 N ? ? D ACE 293 D CYS 294 1_555 ? ? ? ? ? ? ? 1.332 ? ? covale18 covale none ? E CYS 2 SG ? ? ? 1_555 T 8VH . C08 ? ? D CYS 294 D 8VH 401 1_555 ? ? ? ? ? ? ? 1.766 ? ? covale19 covale both ? E CYS 22 C ? ? ? 1_555 E NH2 23 N ? ? D CYS 314 D NH2 315 1_555 ? ? ? ? ? ? ? 1.350 ? ? covale20 covale none ? E CYS 22 SG ? ? ? 1_555 T 8VH . C07 ? ? D CYS 314 D 8VH 401 1_555 ? ? ? ? ? ? ? 1.765 ? ? covale21 covale both ? F ACE 1 C ? ? ? 1_555 F CYS 2 N ? ? F ACE 293 F CYS 294 1_555 ? ? ? ? ? ? ? 1.333 ? ? covale22 covale none ? F CYS 2 SG ? ? ? 1_555 U 8VH . C08 ? ? F CYS 294 F 8VH 401 1_555 ? ? ? ? ? ? ? 1.766 ? ? covale23 covale both ? F CYS 22 C ? ? ? 1_555 F NH2 23 N ? ? F CYS 314 F NH2 315 1_555 ? ? ? ? ? ? ? 1.333 ? ? covale24 covale none ? F CYS 22 SG ? ? ? 1_555 U 8VH . C07 ? ? F CYS 314 F 8VH 401 1_555 ? ? ? ? ? ? ? 1.766 ? ? covale25 covale both ? G ACE 1 C ? ? ? 1_555 G CYS 2 N ? ? G ACE 293 G CYS 294 1_555 ? ? ? ? ? ? ? 1.333 ? ? covale26 covale none ? G CYS 2 SG ? ? ? 1_555 V 8VH . C08 ? ? G CYS 294 G 8VH 401 1_555 ? ? ? ? ? ? ? 1.766 ? ? covale27 covale both ? G CYS 22 C ? ? ? 1_555 G NH2 23 N ? ? G CYS 314 G NH2 315 1_555 ? ? ? ? ? ? ? 1.354 ? ? covale28 covale none ? G CYS 22 SG ? ? ? 1_555 V 8VH . C07 ? ? G CYS 314 G 8VH 401 1_555 ? ? ? ? ? ? ? 1.765 ? ? covale29 covale both ? H ACE 1 C ? ? ? 1_555 H CYS 2 N ? ? I ACE 293 I CYS 294 1_555 ? ? ? ? ? ? ? 1.332 ? ? covale30 covale none ? H CYS 2 SG ? ? ? 1_555 W 8VH . C08 ? ? I CYS 294 I 8VH 401 1_555 ? ? ? ? ? ? ? 1.766 ? ? covale31 covale both ? H CYS 22 C ? ? ? 1_555 H NH2 23 N ? ? I CYS 314 I NH2 315 1_555 ? ? ? ? ? ? ? 1.333 ? ? covale32 covale none ? H CYS 22 SG ? ? ? 1_555 W 8VH . C07 ? ? I CYS 314 I 8VH 401 1_555 ? ? ? ? ? ? ? 1.765 ? ? covale33 covale both ? I ACE 1 C ? ? ? 1_555 I CYS 2 N ? ? M ACE 293 M CYS 294 1_555 ? ? ? ? ? ? ? 1.332 ? ? covale34 covale none ? I CYS 2 SG ? ? ? 1_555 X 8VH . C08 ? ? M CYS 294 M 8VH 401 1_555 ? ? ? ? ? ? ? 1.766 ? ? covale35 covale both ? I CYS 22 C ? ? ? 1_555 I NH2 23 N ? ? M CYS 314 M NH2 315 1_555 ? ? ? ? ? ? ? 1.349 ? ? covale36 covale none ? I CYS 22 SG ? ? ? 1_555 X 8VH . C07 ? ? M CYS 314 M 8VH 401 1_555 ? ? ? ? ? ? ? 1.766 ? ? covale37 covale both ? J ACE 1 C ? ? ? 1_555 J CYS 2 N ? ? O ACE 293 O CYS 294 1_555 ? ? ? ? ? ? ? 1.332 ? ? covale38 covale none ? J CYS 2 SG ? ? ? 1_555 Y 8VH . C08 ? ? O CYS 294 O 8VH 401 1_555 ? ? ? ? ? ? ? 1.767 ? ? covale39 covale both ? J CYS 22 C ? ? ? 1_555 J NH2 23 N ? ? O CYS 314 O NH2 315 1_555 ? ? ? ? ? ? ? 1.334 ? ? covale40 covale none ? J CYS 22 SG ? ? ? 1_555 Y 8VH . C07 ? ? O CYS 314 O 8VH 401 1_555 ? ? ? ? ? ? ? 1.766 ? ? covale41 covale both ? K ACE 1 C ? ? ? 1_555 K CYS 2 N ? ? K ACE 293 K CYS 294 1_555 ? ? ? ? ? ? ? 1.328 ? ? covale42 covale none ? K CYS 2 SG ? ? ? 1_555 Z 8VH . C08 ? ? K CYS 294 K 8VH 401 1_555 ? ? ? ? ? ? ? 1.766 ? ? covale43 covale both ? K CYS 22 C ? ? ? 1_555 K NH2 23 N ? ? K CYS 314 K NH2 315 1_555 ? ? ? ? ? ? ? 1.351 ? ? covale44 covale none ? K CYS 22 SG ? ? ? 1_555 Z 8VH . C07 ? ? K CYS 314 K 8VH 401 1_555 ? ? ? ? ? ? ? 1.766 ? ? covale45 covale both ? L ACE 1 C ? ? ? 1_555 L CYS 2 N ? ? N ACE 293 N CYS 294 1_555 ? ? ? ? ? ? ? 1.364 ? ? covale46 covale none ? L CYS 2 SG ? ? ? 1_555 AA 8VH . C08 ? ? N CYS 294 N 8VH 401 1_555 ? ? ? ? ? ? ? 1.765 ? ? covale47 covale both ? L CYS 22 C ? ? ? 1_555 L NH2 23 N ? ? N CYS 314 N NH2 315 1_555 ? ? ? ? ? ? ? 1.355 ? ? covale48 covale none ? L CYS 22 SG ? ? ? 1_555 AA 8VH . C07 ? ? N CYS 314 N 8VH 401 1_555 ? ? ? ? ? ? ? 1.767 ? ? covale49 covale both ? M ACE 1 C ? ? ? 1_555 M CYS 2 N ? ? E ACE 293 E CYS 294 1_555 ? ? ? ? ? ? ? 1.328 ? ? covale50 covale none ? M CYS 2 SG ? ? ? 1_555 BA 8VH . C08 ? ? E CYS 294 E 8VH 401 1_555 ? ? ? ? ? ? ? 1.766 ? ? covale51 covale both ? M CYS 22 C ? ? ? 1_555 M NH2 23 N ? ? E CYS 314 E NH2 315 1_555 ? ? ? ? ? ? ? 1.362 ? ? covale52 covale none ? M CYS 22 SG ? ? ? 1_555 BA 8VH . C07 ? ? E CYS 314 E 8VH 401 1_555 ? ? ? ? ? ? ? 1.767 ? ? covale53 covale both ? N ACE 1 C ? ? ? 1_555 N CYS 2 N ? ? B ACE 293 B CYS 294 1_555 ? ? ? ? ? ? ? 1.327 ? ? covale54 covale none ? N CYS 2 SG ? ? ? 1_555 CA 8VH . C08 ? ? B CYS 294 B 8VH 401 1_555 ? ? ? ? ? ? ? 1.767 ? ? covale55 covale both ? N CYS 22 C ? ? ? 1_555 N NH2 23 N ? ? B CYS 314 B NH2 315 1_555 ? ? ? ? ? ? ? 1.362 ? ? covale56 covale none ? N CYS 22 SG ? ? ? 1_555 CA 8VH . C07 ? ? B CYS 314 B 8VH 401 1_555 ? ? ? ? ? ? ? 1.767 ? ? covale57 covale both ? O ACE 1 C ? ? ? 1_555 O CYS 2 N ? ? H ACE 293 H CYS 294 1_555 ? ? ? ? ? ? ? 1.328 ? ? covale58 covale none ? O CYS 2 SG ? ? ? 1_555 DA 8VH . C08 ? ? H CYS 294 H 8VH 401 1_555 ? ? ? ? ? ? ? 1.767 ? ? covale59 covale both ? O CYS 22 C ? ? ? 1_555 O NH2 23 N ? ? H CYS 314 H NH2 315 1_555 ? ? ? ? ? ? ? 1.361 ? ? covale60 covale none ? O CYS 22 SG ? ? ? 1_555 DA 8VH . C07 ? ? H CYS 314 H 8VH 401 1_555 ? ? ? ? ? ? ? 1.766 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _pdbx_modification_feature.ordinal _pdbx_modification_feature.label_comp_id _pdbx_modification_feature.label_asym_id _pdbx_modification_feature.label_seq_id _pdbx_modification_feature.label_alt_id _pdbx_modification_feature.modified_residue_label_comp_id _pdbx_modification_feature.modified_residue_label_asym_id _pdbx_modification_feature.modified_residue_label_seq_id _pdbx_modification_feature.modified_residue_label_alt_id _pdbx_modification_feature.auth_comp_id _pdbx_modification_feature.auth_asym_id _pdbx_modification_feature.auth_seq_id _pdbx_modification_feature.PDB_ins_code _pdbx_modification_feature.symmetry _pdbx_modification_feature.modified_residue_auth_comp_id _pdbx_modification_feature.modified_residue_auth_asym_id _pdbx_modification_feature.modified_residue_auth_seq_id _pdbx_modification_feature.modified_residue_PDB_ins_code _pdbx_modification_feature.modified_residue_symmetry _pdbx_modification_feature.comp_id_linking_atom _pdbx_modification_feature.modified_residue_id_linking_atom _pdbx_modification_feature.modified_residue_id _pdbx_modification_feature.ref_pcm_id _pdbx_modification_feature.ref_comp_id _pdbx_modification_feature.type _pdbx_modification_feature.category 1 ACE A 1 ? CYS A 2 ? ACE J 293 ? 1_555 CYS J 294 ? 1_555 . . CYS 11 ACE None 'Terminal acetylation' 2 ACE B 1 ? CYS B 2 ? ACE L 293 ? 1_555 CYS L 294 ? 1_555 . . CYS 11 ACE None 'Terminal acetylation' 3 ACE C 1 ? CYS C 2 ? ACE A 293 ? 1_555 CYS A 294 ? 1_555 . . CYS 11 ACE None 'Terminal acetylation' 4 ACE D 1 ? CYS D 2 ? ACE C 293 ? 1_555 CYS C 294 ? 1_555 . . CYS 11 ACE None 'Terminal acetylation' 5 ACE E 1 ? CYS E 2 ? ACE D 293 ? 1_555 CYS D 294 ? 1_555 . . CYS 11 ACE None 'Terminal acetylation' 6 ACE F 1 ? CYS F 2 ? ACE F 293 ? 1_555 CYS F 294 ? 1_555 . . CYS 11 ACE None 'Terminal acetylation' 7 ACE G 1 ? CYS G 2 ? ACE G 293 ? 1_555 CYS G 294 ? 1_555 . . CYS 11 ACE None 'Terminal acetylation' 8 ACE H 1 ? CYS H 2 ? ACE I 293 ? 1_555 CYS I 294 ? 1_555 . . CYS 11 ACE None 'Terminal acetylation' 9 ACE I 1 ? CYS I 2 ? ACE M 293 ? 1_555 CYS M 294 ? 1_555 . . CYS 11 ACE None 'Terminal acetylation' 10 ACE J 1 ? CYS J 2 ? ACE O 293 ? 1_555 CYS O 294 ? 1_555 . . CYS 11 ACE None 'Terminal acetylation' 11 ACE K 1 ? CYS K 2 ? ACE K 293 ? 1_555 CYS K 294 ? 1_555 . . CYS 11 ACE None 'Terminal acetylation' 12 ACE L 1 ? CYS L 2 ? ACE N 293 ? 1_555 CYS N 294 ? 1_555 . . CYS 11 ACE None 'Terminal acetylation' 13 ACE M 1 ? CYS M 2 ? ACE E 293 ? 1_555 CYS E 294 ? 1_555 . . CYS 11 ACE None 'Terminal acetylation' 14 ACE N 1 ? CYS N 2 ? ACE B 293 ? 1_555 CYS B 294 ? 1_555 . . CYS 11 ACE None 'Terminal acetylation' 15 ACE O 1 ? CYS O 2 ? ACE H 293 ? 1_555 CYS H 294 ? 1_555 . . CYS 11 ACE None 'Terminal acetylation' 16 NH2 A 23 ? CYS A 22 ? NH2 J 315 ? 1_555 CYS J 314 ? 1_555 . . CYS 11 NH2 None 'Terminal amidation' 17 NH2 B 23 ? CYS B 22 ? NH2 L 315 ? 1_555 CYS L 314 ? 1_555 . . CYS 11 NH2 None 'Terminal amidation' 18 NH2 C 23 ? CYS C 22 ? NH2 A 315 ? 1_555 CYS A 314 ? 1_555 . . CYS 11 NH2 None 'Terminal amidation' 19 NH2 D 23 ? CYS D 22 ? NH2 C 315 ? 1_555 CYS C 314 ? 1_555 . . CYS 11 NH2 None 'Terminal amidation' 20 NH2 E 23 ? CYS E 22 ? NH2 D 315 ? 1_555 CYS D 314 ? 1_555 . . CYS 11 NH2 None 'Terminal amidation' 21 NH2 F 23 ? CYS F 22 ? NH2 F 315 ? 1_555 CYS F 314 ? 1_555 . . CYS 11 NH2 None 'Terminal amidation' 22 NH2 G 23 ? CYS G 22 ? NH2 G 315 ? 1_555 CYS G 314 ? 1_555 . . CYS 11 NH2 None 'Terminal amidation' 23 NH2 H 23 ? CYS H 22 ? NH2 I 315 ? 1_555 CYS I 314 ? 1_555 . . CYS 11 NH2 None 'Terminal amidation' 24 NH2 I 23 ? CYS I 22 ? NH2 M 315 ? 1_555 CYS M 314 ? 1_555 . . CYS 11 NH2 None 'Terminal amidation' 25 NH2 J 23 ? CYS J 22 ? NH2 O 315 ? 1_555 CYS O 314 ? 1_555 . . CYS 11 NH2 None 'Terminal amidation' 26 NH2 K 23 ? CYS K 22 ? NH2 K 315 ? 1_555 CYS K 314 ? 1_555 . . CYS 11 NH2 None 'Terminal amidation' 27 NH2 L 23 ? CYS L 22 ? NH2 N 315 ? 1_555 CYS N 314 ? 1_555 . . CYS 11 NH2 None 'Terminal amidation' 28 NH2 M 23 ? CYS M 22 ? NH2 E 315 ? 1_555 CYS E 314 ? 1_555 . . CYS 11 NH2 None 'Terminal amidation' 29 NH2 N 23 ? CYS N 22 ? NH2 B 315 ? 1_555 CYS B 314 ? 1_555 . . CYS 11 NH2 None 'Terminal amidation' 30 NH2 O 23 ? CYS O 22 ? NH2 H 315 ? 1_555 CYS H 314 ? 1_555 . . CYS 11 NH2 None 'Terminal amidation' 31 8VH AA . ? CYS L 22 ? 8VH N 401 ? 1_555 CYS N 314 ? 1_555 C07 SG CYS 1 8VH None Crosslinker 32 8VH AA . ? CYS L 2 ? 8VH N 401 ? 1_555 CYS N 294 ? 1_555 C08 SG CYS 2 8VH None Crosslinker 33 8VH BA . ? CYS M 22 ? 8VH E 401 ? 1_555 CYS E 314 ? 1_555 C07 SG CYS 1 8VH None Crosslinker 34 8VH BA . ? CYS M 2 ? 8VH E 401 ? 1_555 CYS E 294 ? 1_555 C08 SG CYS 2 8VH None Crosslinker 35 8VH CA . ? CYS N 22 ? 8VH B 401 ? 1_555 CYS B 314 ? 1_555 C07 SG CYS 1 8VH None Crosslinker 36 8VH CA . ? CYS N 2 ? 8VH B 401 ? 1_555 CYS B 294 ? 1_555 C08 SG CYS 2 8VH None Crosslinker 37 8VH DA . ? CYS O 22 ? 8VH H 401 ? 1_555 CYS H 314 ? 1_555 C07 SG CYS 1 8VH None Crosslinker 38 8VH DA . ? CYS O 2 ? 8VH H 401 ? 1_555 CYS H 294 ? 1_555 C08 SG CYS 2 8VH None Crosslinker 39 8VH P . ? CYS A 22 ? 8VH J 401 ? 1_555 CYS J 314 ? 1_555 C07 SG CYS 1 8VH None Crosslinker 40 8VH P . ? CYS A 2 ? 8VH J 401 ? 1_555 CYS J 294 ? 1_555 C08 SG CYS 2 8VH None Crosslinker 41 8VH Q . ? CYS B 22 ? 8VH L 401 ? 1_555 CYS L 314 ? 1_555 C07 SG CYS 1 8VH None Crosslinker 42 8VH Q . ? CYS B 2 ? 8VH L 401 ? 1_555 CYS L 294 ? 1_555 C08 SG CYS 2 8VH None Crosslinker 43 8VH R . ? CYS C 22 ? 8VH A 401 ? 1_555 CYS A 314 ? 1_555 C07 SG CYS 1 8VH None Crosslinker 44 8VH R . ? CYS C 2 ? 8VH A 401 ? 1_555 CYS A 294 ? 1_555 C08 SG CYS 2 8VH None Crosslinker 45 8VH S . ? CYS D 22 ? 8VH C 401 ? 1_555 CYS C 314 ? 1_555 C07 SG CYS 1 8VH None Crosslinker 46 8VH S . ? CYS D 2 ? 8VH C 401 ? 1_555 CYS C 294 ? 1_555 C08 SG CYS 2 8VH None Crosslinker 47 8VH T . ? CYS E 22 ? 8VH D 401 ? 1_555 CYS D 314 ? 1_555 C07 SG CYS 1 8VH None Crosslinker 48 8VH T . ? CYS E 2 ? 8VH D 401 ? 1_555 CYS D 294 ? 1_555 C08 SG CYS 2 8VH None Crosslinker 49 8VH U . ? CYS F 22 ? 8VH F 401 ? 1_555 CYS F 314 ? 1_555 C07 SG CYS 1 8VH None Crosslinker 50 8VH U . ? CYS F 2 ? 8VH F 401 ? 1_555 CYS F 294 ? 1_555 C08 SG CYS 2 8VH None Crosslinker 51 8VH V . ? CYS G 22 ? 8VH G 401 ? 1_555 CYS G 314 ? 1_555 C07 SG CYS 1 8VH None Crosslinker 52 8VH V . ? CYS G 2 ? 8VH G 401 ? 1_555 CYS G 294 ? 1_555 C08 SG CYS 2 8VH None Crosslinker 53 8VH W . ? CYS H 22 ? 8VH I 401 ? 1_555 CYS I 314 ? 1_555 C07 SG CYS 1 8VH None Crosslinker 54 8VH W . ? CYS H 2 ? 8VH I 401 ? 1_555 CYS I 294 ? 1_555 C08 SG CYS 2 8VH None Crosslinker 55 8VH X . ? CYS I 22 ? 8VH M 401 ? 1_555 CYS M 314 ? 1_555 C07 SG CYS 1 8VH None Crosslinker 56 8VH X . ? CYS I 2 ? 8VH M 401 ? 1_555 CYS M 294 ? 1_555 C08 SG CYS 2 8VH None Crosslinker 57 8VH Y . ? CYS J 22 ? 8VH O 401 ? 1_555 CYS O 314 ? 1_555 C07 SG CYS 1 8VH None Crosslinker 58 8VH Y . ? CYS J 2 ? 8VH O 401 ? 1_555 CYS O 294 ? 1_555 C08 SG CYS 2 8VH None Crosslinker 59 8VH Z . ? CYS K 22 ? 8VH K 401 ? 1_555 CYS K 314 ? 1_555 C07 SG CYS 1 8VH None Crosslinker 60 8VH Z . ? CYS K 2 ? 8VH K 401 ? 1_555 CYS K 294 ? 1_555 C08 SG CYS 2 8VH None Crosslinker # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 5 ? AA2 ? 5 ? AA3 ? 5 ? AA4 ? 5 ? AA5 ? 5 ? AA6 ? 5 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? parallel AA1 2 3 ? parallel AA1 3 4 ? parallel AA1 4 5 ? parallel AA2 1 2 ? parallel AA2 2 3 ? parallel AA2 3 4 ? parallel AA2 4 5 ? parallel AA3 1 2 ? parallel AA3 2 3 ? parallel AA3 3 4 ? parallel AA3 4 5 ? parallel AA4 1 2 ? parallel AA4 2 3 ? parallel AA4 3 4 ? parallel AA4 4 5 ? parallel AA5 1 2 ? parallel AA5 2 3 ? parallel AA5 3 4 ? parallel AA5 4 5 ? parallel AA6 1 2 ? parallel AA6 2 3 ? parallel AA6 3 4 ? parallel AA6 4 5 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 LYS C 6 ? HIS C 7 ? LYS A 298 HIS A 299 AA1 2 LYS E 6 ? HIS E 7 ? LYS D 298 HIS D 299 AA1 3 LYS G 6 ? HIS G 7 ? LYS G 298 HIS G 299 AA1 4 LYS A 6 ? HIS A 7 ? LYS J 298 HIS J 299 AA1 5 LYS I 6 ? HIS I 7 ? LYS M 298 HIS M 299 AA2 1 SER C 13 ? ILE C 16 ? SER A 305 ILE A 308 AA2 2 SER E 13 ? ILE E 16 ? SER D 305 ILE D 308 AA2 3 SER G 13 ? ILE G 16 ? SER G 305 ILE G 308 AA2 4 SER A 13 ? ILE A 16 ? SER J 305 ILE J 308 AA2 5 SER I 13 ? ILE I 16 ? SER M 305 ILE M 308 AA3 1 LYS D 6 ? HIS D 7 ? LYS C 298 HIS C 299 AA3 2 LYS F 6 ? HIS F 7 ? LYS F 298 HIS F 299 AA3 3 LYS H 6 ? HIS H 7 ? LYS I 298 HIS I 299 AA3 4 LYS B 6 ? HIS B 7 ? LYS L 298 HIS L 299 AA3 5 LYS J 6 ? HIS J 7 ? LYS O 298 HIS O 299 AA4 1 SER D 13 ? ILE D 16 ? SER C 305 ILE C 308 AA4 2 SER F 13 ? ILE F 16 ? SER F 305 ILE F 308 AA4 3 SER H 13 ? ILE H 16 ? SER I 305 ILE I 308 AA4 4 SER B 13 ? ILE B 16 ? SER L 305 ILE L 308 AA4 5 SER J 13 ? ILE J 16 ? SER O 305 ILE O 308 AA5 1 LYS L 6 ? HIS L 7 ? LYS N 298 HIS N 299 AA5 2 LYS K 6 ? HIS K 7 ? LYS K 298 HIS K 299 AA5 3 LYS O 6 ? HIS O 7 ? LYS H 298 HIS H 299 AA5 4 LYS M 6 ? HIS M 7 ? LYS E 298 HIS E 299 AA5 5 LYS N 6 ? HIS N 7 ? LYS B 298 HIS B 299 AA6 1 SER L 13 ? ILE L 16 ? SER N 305 ILE N 308 AA6 2 SER K 13 ? ILE K 16 ? SER K 305 ILE K 308 AA6 3 SER O 13 ? ILE O 16 ? SER H 305 ILE H 308 AA6 4 SER M 13 ? ILE M 16 ? SER E 305 ILE E 308 AA6 5 SER N 13 ? ILE N 16 ? SER B 305 ILE B 308 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 O LYS C 6 ? O LYS A 298 N HIS E 7 ? N HIS D 299 AA1 2 3 O LYS E 6 ? O LYS D 298 N HIS G 7 ? N HIS G 299 AA1 3 4 O LYS G 6 ? O LYS G 298 N HIS A 7 ? N HIS J 299 AA1 4 5 O LYS A 6 ? O LYS J 298 N HIS I 7 ? N HIS M 299 AA2 1 2 N ILE C 16 ? N ILE A 308 O GLN E 15 ? O GLN D 307 AA2 2 3 N ILE E 16 ? N ILE D 308 O GLN G 15 ? O GLN G 307 AA2 3 4 O ILE G 16 ? O ILE G 308 N GLN A 15 ? N GLN J 307 AA2 4 5 N ILE A 16 ? N ILE J 308 O GLN I 15 ? O GLN M 307 AA3 1 2 O LYS D 6 ? O LYS C 298 N HIS F 7 ? N HIS F 299 AA3 2 3 O LYS F 6 ? O LYS F 298 N HIS H 7 ? N HIS I 299 AA3 3 4 O LYS H 6 ? O LYS I 298 N HIS B 7 ? N HIS L 299 AA3 4 5 O LYS B 6 ? O LYS L 298 N HIS J 7 ? N HIS O 299 AA4 1 2 N ILE D 16 ? N ILE C 308 O GLN F 15 ? O GLN F 307 AA4 2 3 N ILE F 16 ? N ILE F 308 O GLN H 15 ? O GLN I 307 AA4 3 4 O ILE H 16 ? O ILE I 308 N GLN B 15 ? N GLN L 307 AA4 4 5 N ILE B 16 ? N ILE L 308 O GLN J 15 ? O GLN O 307 AA5 1 2 O LYS L 6 ? O LYS N 298 N HIS K 7 ? N HIS K 299 AA5 2 3 O LYS K 6 ? O LYS K 298 N HIS O 7 ? N HIS H 299 AA5 3 4 O LYS O 6 ? O LYS H 298 N HIS M 7 ? N HIS E 299 AA5 4 5 O LYS M 6 ? O LYS E 298 N HIS N 7 ? N HIS B 299 AA6 1 2 O ILE L 16 ? O ILE N 308 N GLN K 15 ? N GLN K 307 AA6 2 3 N ILE K 16 ? N ILE K 308 O GLN O 15 ? O GLN H 307 AA6 3 4 O ILE O 16 ? O ILE H 308 N GLN M 15 ? N GLN E 307 AA6 4 5 N ILE M 16 ? N ILE E 308 O GLN N 15 ? O GLN B 307 # _pdbx_entry_details.entry_id 9DME _pdbx_entry_details.has_ligand_of_interest Y _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_protein_modification Y # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O C ACE 293 ? ? CE H LYS 311 ? ? 1.96 2 1 O F ACE 293 ? ? CE E LYS 311 ? ? 1.97 3 1 O I ACE 293 ? ? CE B LYS 311 ? ? 1.98 4 1 CE L LYS 311 ? ? O G ACE 293 ? ? 2.04 5 1 O D ACE 293 ? ? CE I LYS 311 ? ? 2.05 6 1 O A ACE 293 ? ? CE F LYS 311 ? ? 2.08 7 1 O J ACE 293 ? ? CE O LYS 311 ? ? 2.10 8 1 O F ACE 293 ? ? NZ E LYS 311 ? ? 2.10 9 1 O I ACE 293 ? ? NZ B LYS 311 ? ? 2.11 10 1 O C ACE 293 ? ? NZ H LYS 311 ? ? 2.11 11 1 NZ L LYS 311 ? ? O G ACE 293 ? ? 2.17 12 1 O D ACE 293 ? ? NZ I LYS 311 ? ? 2.18 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 LYS J 311 ? ? 35.66 54.25 2 1 LYS L 311 ? ? 35.64 54.32 3 1 LYS A 311 ? ? 35.71 54.27 4 1 LYS C 311 ? ? 35.73 54.28 5 1 LYS D 311 ? ? 35.73 54.28 6 1 LYS F 311 ? ? 35.66 54.31 7 1 LYS G 311 ? ? 35.62 54.33 8 1 LYS I 311 ? ? 35.70 54.31 9 1 LYS M 311 ? ? 35.70 54.27 10 1 LYS O 311 ? ? 35.69 54.27 11 1 LYS K 311 ? ? 35.68 54.32 12 1 LYS N 311 ? ? 35.68 54.32 13 1 LYS E 311 ? ? 35.72 54.34 14 1 LYS B 311 ? ? 35.75 54.35 15 1 LYS H 311 ? ? 35.73 54.38 # _em_3d_fitting.id 1 _em_3d_fitting.entry_id 9DME _em_3d_fitting.method ? _em_3d_fitting.target_criteria ? _em_3d_fitting.details ? _em_3d_fitting.overall_b_value ? _em_3d_fitting.ref_space ? _em_3d_fitting.ref_protocol 'BACKBONE TRACE' # _em_3d_reconstruction.entry_id 9DME _em_3d_reconstruction.id 1 _em_3d_reconstruction.method ? _em_3d_reconstruction.algorithm ? _em_3d_reconstruction.citation_id ? _em_3d_reconstruction.details ? _em_3d_reconstruction.resolution 3.2 _em_3d_reconstruction.resolution_method 'FSC 0.143 CUT-OFF' _em_3d_reconstruction.magnification_calibration ? _em_3d_reconstruction.nominal_pixel_size ? _em_3d_reconstruction.actual_pixel_size ? _em_3d_reconstruction.num_particles 64477 _em_3d_reconstruction.euler_angles_details ? _em_3d_reconstruction.num_class_averages ? _em_3d_reconstruction.refinement_type ? _em_3d_reconstruction.image_processing_id 1 _em_3d_reconstruction.symmetry_type HELICAL # _em_buffer.id 1 _em_buffer.specimen_id 1 _em_buffer.name ? _em_buffer.details ? _em_buffer.pH 7.6 # _em_entity_assembly.id 1 _em_entity_assembly.parent_id 0 _em_entity_assembly.source NATURAL _em_entity_assembly.type COMPLEX _em_entity_assembly.name 'Type 3 KD-mxyl filament of miniature tau macrocycle derived from 4R tauopathic fold' _em_entity_assembly.details ? _em_entity_assembly.synonym ? _em_entity_assembly.oligomeric_details ? _em_entity_assembly.entity_id_list 1 # _em_imaging.entry_id 9DME _em_imaging.id 1 _em_imaging.astigmatism ? _em_imaging.electron_beam_tilt_params ? _em_imaging.residual_tilt ? _em_imaging.microscope_model 'FEI TITAN KRIOS' _em_imaging.specimen_holder_type ? _em_imaging.specimen_holder_model ? _em_imaging.details ? _em_imaging.date ? _em_imaging.accelerating_voltage 300 _em_imaging.illumination_mode 'FLOOD BEAM' _em_imaging.mode 'BRIGHT FIELD' _em_imaging.nominal_cs ? _em_imaging.nominal_defocus_min 600 _em_imaging.nominal_defocus_max 2000 _em_imaging.calibrated_defocus_min ? _em_imaging.calibrated_defocus_max ? _em_imaging.tilt_angle_min ? _em_imaging.tilt_angle_max ? _em_imaging.nominal_magnification ? _em_imaging.calibrated_magnification ? _em_imaging.electron_source 'FIELD EMISSION GUN' _em_imaging.citation_id ? _em_imaging.temperature ? _em_imaging.detector_distance ? _em_imaging.recording_temperature_minimum ? _em_imaging.recording_temperature_maximum ? _em_imaging.alignment_procedure ? _em_imaging.c2_aperture_diameter 50 _em_imaging.specimen_id 1 _em_imaging.cryogen ? # _em_vitrification.entry_id 9DME _em_vitrification.id 1 _em_vitrification.specimen_id 1 _em_vitrification.cryogen_name ETHANE _em_vitrification.humidity ? _em_vitrification.temp ? _em_vitrification.chamber_temperature ? _em_vitrification.instrument ? _em_vitrification.method ? _em_vitrification.time_resolved_state ? _em_vitrification.citation_id ? _em_vitrification.details ? # _em_experiment.entry_id 9DME _em_experiment.id 1 _em_experiment.reconstruction_method HELICAL _em_experiment.aggregation_state FILAMENT _em_experiment.entity_assembly_id 1 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal 8VH C01 C Y N 1 8VH C02 C Y N 2 8VH C03 C Y N 3 8VH C04 C Y N 4 8VH C05 C Y N 5 8VH C06 C Y N 6 8VH C07 C N N 7 8VH C08 C N N 8 8VH H1 H N N 9 8VH H2 H N N 10 8VH H3 H N N 11 8VH H4 H N N 12 8VH H5 H N N 13 8VH H6 H N N 14 8VH H7 H N N 15 8VH H8 H N N 16 8VH H9 H N N 17 8VH H10 H N N 18 ACE C C N N 19 ACE O O N N 20 ACE CH3 C N N 21 ACE H H N N 22 ACE H1 H N N 23 ACE H2 H N N 24 ACE H3 H N N 25 ASN N N N N 26 ASN CA C N S 27 ASN C C N N 28 ASN O O N N 29 ASN CB C N N 30 ASN CG C N N 31 ASN OD1 O N N 32 ASN ND2 N N N 33 ASN OXT O N N 34 ASN H H N N 35 ASN H2 H N N 36 ASN HA H N N 37 ASN HB2 H N N 38 ASN HB3 H N N 39 ASN HD21 H N N 40 ASN HD22 H N N 41 ASN HXT H N N 42 ASP N N N N 43 ASP CA C N S 44 ASP C C N N 45 ASP O O N N 46 ASP CB C N N 47 ASP CG C N N 48 ASP OD1 O N N 49 ASP OD2 O N N 50 ASP OXT O N N 51 ASP H H N N 52 ASP H2 H N N 53 ASP HA H N N 54 ASP HB2 H N N 55 ASP HB3 H N N 56 ASP HD2 H N N 57 ASP HXT H N N 58 CYS N N N N 59 CYS CA C N R 60 CYS C C N N 61 CYS O O N N 62 CYS CB C N N 63 CYS SG S N N 64 CYS OXT O N N 65 CYS H H N N 66 CYS H2 H N N 67 CYS HA H N N 68 CYS HB2 H N N 69 CYS HB3 H N N 70 CYS HG H N N 71 CYS HXT H N N 72 GLN N N N N 73 GLN CA C N S 74 GLN C C N N 75 GLN O O N N 76 GLN CB C N N 77 GLN CG C N N 78 GLN CD C N N 79 GLN OE1 O N N 80 GLN NE2 N N N 81 GLN OXT O N N 82 GLN H H N N 83 GLN H2 H N N 84 GLN HA H N N 85 GLN HB2 H N N 86 GLN HB3 H N N 87 GLN HG2 H N N 88 GLN HG3 H N N 89 GLN HE21 H N N 90 GLN HE22 H N N 91 GLN HXT H N N 92 GLY N N N N 93 GLY CA C N N 94 GLY C C N N 95 GLY O O N N 96 GLY OXT O N N 97 GLY H H N N 98 GLY H2 H N N 99 GLY HA2 H N N 100 GLY HA3 H N N 101 GLY HXT H N N 102 HIS N N N N 103 HIS CA C N S 104 HIS C C N N 105 HIS O O N N 106 HIS CB C N N 107 HIS CG C Y N 108 HIS ND1 N Y N 109 HIS CD2 C Y N 110 HIS CE1 C Y N 111 HIS NE2 N Y N 112 HIS OXT O N N 113 HIS H H N N 114 HIS H2 H N N 115 HIS HA H N N 116 HIS HB2 H N N 117 HIS HB3 H N N 118 HIS HD1 H N N 119 HIS HD2 H N N 120 HIS HE1 H N N 121 HIS HE2 H N N 122 HIS HXT H N N 123 ILE N N N N 124 ILE CA C N S 125 ILE C C N N 126 ILE O O N N 127 ILE CB C N S 128 ILE CG1 C N N 129 ILE CG2 C N N 130 ILE CD1 C N N 131 ILE OXT O N N 132 ILE H H N N 133 ILE H2 H N N 134 ILE HA H N N 135 ILE HB H N N 136 ILE HG12 H N N 137 ILE HG13 H N N 138 ILE HG21 H N N 139 ILE HG22 H N N 140 ILE HG23 H N N 141 ILE HD11 H N N 142 ILE HD12 H N N 143 ILE HD13 H N N 144 ILE HXT H N N 145 LYS N N N N 146 LYS CA C N S 147 LYS C C N N 148 LYS O O N N 149 LYS CB C N N 150 LYS CG C N N 151 LYS CD C N N 152 LYS CE C N N 153 LYS NZ N N N 154 LYS OXT O N N 155 LYS H H N N 156 LYS H2 H N N 157 LYS HA H N N 158 LYS HB2 H N N 159 LYS HB3 H N N 160 LYS HG2 H N N 161 LYS HG3 H N N 162 LYS HD2 H N N 163 LYS HD3 H N N 164 LYS HE2 H N N 165 LYS HE3 H N N 166 LYS HZ1 H N N 167 LYS HZ2 H N N 168 LYS HZ3 H N N 169 LYS HXT H N N 170 NH2 N N N N 171 NH2 HN1 H N N 172 NH2 HN2 H N N 173 PRO N N N N 174 PRO CA C N S 175 PRO C C N N 176 PRO O O N N 177 PRO CB C N N 178 PRO CG C N N 179 PRO CD C N N 180 PRO OXT O N N 181 PRO H H N N 182 PRO HA H N N 183 PRO HB2 H N N 184 PRO HB3 H N N 185 PRO HG2 H N N 186 PRO HG3 H N N 187 PRO HD2 H N N 188 PRO HD3 H N N 189 PRO HXT H N N 190 SER N N N N 191 SER CA C N S 192 SER C C N N 193 SER O O N N 194 SER CB C N N 195 SER OG O N N 196 SER OXT O N N 197 SER H H N N 198 SER H2 H N N 199 SER HA H N N 200 SER HB2 H N N 201 SER HB3 H N N 202 SER HG H N N 203 SER HXT H N N 204 TYR N N N N 205 TYR CA C N S 206 TYR C C N N 207 TYR O O N N 208 TYR CB C N N 209 TYR CG C Y N 210 TYR CD1 C Y N 211 TYR CD2 C Y N 212 TYR CE1 C Y N 213 TYR CE2 C Y N 214 TYR CZ C Y N 215 TYR OH O N N 216 TYR OXT O N N 217 TYR H H N N 218 TYR H2 H N N 219 TYR HA H N N 220 TYR HB2 H N N 221 TYR HB3 H N N 222 TYR HD1 H N N 223 TYR HD2 H N N 224 TYR HE1 H N N 225 TYR HE2 H N N 226 TYR HH H N N 227 TYR HXT H N N 228 VAL N N N N 229 VAL CA C N S 230 VAL C C N N 231 VAL O O N N 232 VAL CB C N N 233 VAL CG1 C N N 234 VAL CG2 C N N 235 VAL OXT O N N 236 VAL H H N N 237 VAL H2 H N N 238 VAL HA H N N 239 VAL HB H N N 240 VAL HG11 H N N 241 VAL HG12 H N N 242 VAL HG13 H N N 243 VAL HG21 H N N 244 VAL HG22 H N N 245 VAL HG23 H N N 246 VAL HXT H N N 247 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 8VH C08 C01 sing N N 1 8VH C06 C01 doub Y N 2 8VH C06 C05 sing Y N 3 8VH C01 C02 sing Y N 4 8VH C05 C04 doub Y N 5 8VH C02 C03 doub Y N 6 8VH C04 C03 sing Y N 7 8VH C03 C07 sing N N 8 8VH C02 H1 sing N N 9 8VH C04 H2 sing N N 10 8VH C05 H3 sing N N 11 8VH C06 H4 sing N N 12 8VH C07 H5 sing N N 13 8VH C07 H6 sing N N 14 8VH C07 H7 sing N N 15 8VH C08 H8 sing N N 16 8VH C08 H9 sing N N 17 8VH C08 H10 sing N N 18 ACE C O doub N N 19 ACE C CH3 sing N N 20 ACE C H sing N N 21 ACE CH3 H1 sing N N 22 ACE CH3 H2 sing N N 23 ACE CH3 H3 sing N N 24 ASN N CA sing N N 25 ASN N H sing N N 26 ASN N H2 sing N N 27 ASN CA C sing N N 28 ASN CA CB sing N N 29 ASN CA HA sing N N 30 ASN C O doub N N 31 ASN C OXT sing N N 32 ASN CB CG sing N N 33 ASN CB HB2 sing N N 34 ASN CB HB3 sing N N 35 ASN CG OD1 doub N N 36 ASN CG ND2 sing N N 37 ASN ND2 HD21 sing N N 38 ASN ND2 HD22 sing N N 39 ASN OXT HXT sing N N 40 ASP N CA sing N N 41 ASP N H sing N N 42 ASP N H2 sing N N 43 ASP CA C sing N N 44 ASP CA CB sing N N 45 ASP CA HA sing N N 46 ASP C O doub N N 47 ASP C OXT sing N N 48 ASP CB CG sing N N 49 ASP CB HB2 sing N N 50 ASP CB HB3 sing N N 51 ASP CG OD1 doub N N 52 ASP CG OD2 sing N N 53 ASP OD2 HD2 sing N N 54 ASP OXT HXT sing N N 55 CYS N CA sing N N 56 CYS N H sing N N 57 CYS N H2 sing N N 58 CYS CA C sing N N 59 CYS CA CB sing N N 60 CYS CA HA sing N N 61 CYS C O doub N N 62 CYS C OXT sing N N 63 CYS CB SG sing N N 64 CYS CB HB2 sing N N 65 CYS CB HB3 sing N N 66 CYS SG HG sing N N 67 CYS OXT HXT sing N N 68 GLN N CA sing N N 69 GLN N H sing N N 70 GLN N H2 sing N N 71 GLN CA C sing N N 72 GLN CA CB sing N N 73 GLN CA HA sing N N 74 GLN C O doub N N 75 GLN C OXT sing N N 76 GLN CB CG sing N N 77 GLN CB HB2 sing N N 78 GLN CB HB3 sing N N 79 GLN CG CD sing N N 80 GLN CG HG2 sing N N 81 GLN CG HG3 sing N N 82 GLN CD OE1 doub N N 83 GLN CD NE2 sing N N 84 GLN NE2 HE21 sing N N 85 GLN NE2 HE22 sing N N 86 GLN OXT HXT sing N N 87 GLY N CA sing N N 88 GLY N H sing N N 89 GLY N H2 sing N N 90 GLY CA C sing N N 91 GLY CA HA2 sing N N 92 GLY CA HA3 sing N N 93 GLY C O doub N N 94 GLY C OXT sing N N 95 GLY OXT HXT sing N N 96 HIS N CA sing N N 97 HIS N H sing N N 98 HIS N H2 sing N N 99 HIS CA C sing N N 100 HIS CA CB sing N N 101 HIS CA HA sing N N 102 HIS C O doub N N 103 HIS C OXT sing N N 104 HIS CB CG sing N N 105 HIS CB HB2 sing N N 106 HIS CB HB3 sing N N 107 HIS CG ND1 sing Y N 108 HIS CG CD2 doub Y N 109 HIS ND1 CE1 doub Y N 110 HIS ND1 HD1 sing N N 111 HIS CD2 NE2 sing Y N 112 HIS CD2 HD2 sing N N 113 HIS CE1 NE2 sing Y N 114 HIS CE1 HE1 sing N N 115 HIS NE2 HE2 sing N N 116 HIS OXT HXT sing N N 117 ILE N CA sing N N 118 ILE N H sing N N 119 ILE N H2 sing N N 120 ILE CA C sing N N 121 ILE CA CB sing N N 122 ILE CA HA sing N N 123 ILE C O doub N N 124 ILE C OXT sing N N 125 ILE CB CG1 sing N N 126 ILE CB CG2 sing N N 127 ILE CB HB sing N N 128 ILE CG1 CD1 sing N N 129 ILE CG1 HG12 sing N N 130 ILE CG1 HG13 sing N N 131 ILE CG2 HG21 sing N N 132 ILE CG2 HG22 sing N N 133 ILE CG2 HG23 sing N N 134 ILE CD1 HD11 sing N N 135 ILE CD1 HD12 sing N N 136 ILE CD1 HD13 sing N N 137 ILE OXT HXT sing N N 138 LYS N CA sing N N 139 LYS N H sing N N 140 LYS N H2 sing N N 141 LYS CA C sing N N 142 LYS CA CB sing N N 143 LYS CA HA sing N N 144 LYS C O doub N N 145 LYS C OXT sing N N 146 LYS CB CG sing N N 147 LYS CB HB2 sing N N 148 LYS CB HB3 sing N N 149 LYS CG CD sing N N 150 LYS CG HG2 sing N N 151 LYS CG HG3 sing N N 152 LYS CD CE sing N N 153 LYS CD HD2 sing N N 154 LYS CD HD3 sing N N 155 LYS CE NZ sing N N 156 LYS CE HE2 sing N N 157 LYS CE HE3 sing N N 158 LYS NZ HZ1 sing N N 159 LYS NZ HZ2 sing N N 160 LYS NZ HZ3 sing N N 161 LYS OXT HXT sing N N 162 NH2 N HN1 sing N N 163 NH2 N HN2 sing N N 164 PRO N CA sing N N 165 PRO N CD sing N N 166 PRO N H sing N N 167 PRO CA C sing N N 168 PRO CA CB sing N N 169 PRO CA HA sing N N 170 PRO C O doub N N 171 PRO C OXT sing N N 172 PRO CB CG sing N N 173 PRO CB HB2 sing N N 174 PRO CB HB3 sing N N 175 PRO CG CD sing N N 176 PRO CG HG2 sing N N 177 PRO CG HG3 sing N N 178 PRO CD HD2 sing N N 179 PRO CD HD3 sing N N 180 PRO OXT HXT sing N N 181 SER N CA sing N N 182 SER N H sing N N 183 SER N H2 sing N N 184 SER CA C sing N N 185 SER CA CB sing N N 186 SER CA HA sing N N 187 SER C O doub N N 188 SER C OXT sing N N 189 SER CB OG sing N N 190 SER CB HB2 sing N N 191 SER CB HB3 sing N N 192 SER OG HG sing N N 193 SER OXT HXT sing N N 194 TYR N CA sing N N 195 TYR N H sing N N 196 TYR N H2 sing N N 197 TYR CA C sing N N 198 TYR CA CB sing N N 199 TYR CA HA sing N N 200 TYR C O doub N N 201 TYR C OXT sing N N 202 TYR CB CG sing N N 203 TYR CB HB2 sing N N 204 TYR CB HB3 sing N N 205 TYR CG CD1 doub Y N 206 TYR CG CD2 sing Y N 207 TYR CD1 CE1 sing Y N 208 TYR CD1 HD1 sing N N 209 TYR CD2 CE2 doub Y N 210 TYR CD2 HD2 sing N N 211 TYR CE1 CZ doub Y N 212 TYR CE1 HE1 sing N N 213 TYR CE2 CZ sing Y N 214 TYR CE2 HE2 sing N N 215 TYR CZ OH sing N N 216 TYR OH HH sing N N 217 TYR OXT HXT sing N N 218 VAL N CA sing N N 219 VAL N H sing N N 220 VAL N H2 sing N N 221 VAL CA C sing N N 222 VAL CA CB sing N N 223 VAL CA HA sing N N 224 VAL C O doub N N 225 VAL C OXT sing N N 226 VAL CB CG1 sing N N 227 VAL CB CG2 sing N N 228 VAL CB HB sing N N 229 VAL CG1 HG11 sing N N 230 VAL CG1 HG12 sing N N 231 VAL CG1 HG13 sing N N 232 VAL CG2 HG21 sing N N 233 VAL CG2 HG22 sing N N 234 VAL CG2 HG23 sing N N 235 VAL OXT HXT sing N N 236 # _em_admin.current_status REL _em_admin.deposition_date 2024-09-13 _em_admin.deposition_site RCSB _em_admin.entry_id 9DME _em_admin.last_update 2025-11-05 _em_admin.map_release_date 2025-04-23 _em_admin.title 'Type 3 KD-mxyl filament of miniature tau macrocycle derived from 4R tauopathic fold' # _em_ctf_correction.details ? _em_ctf_correction.em_image_processing_id 1 _em_ctf_correction.id 1 _em_ctf_correction.type NONE # _em_entity_assembly_naturalsource.cell ? _em_entity_assembly_naturalsource.cellular_location ? _em_entity_assembly_naturalsource.entity_assembly_id 1 _em_entity_assembly_naturalsource.id 2 _em_entity_assembly_naturalsource.ncbi_tax_id 9606 _em_entity_assembly_naturalsource.organism 'Homo sapiens' _em_entity_assembly_naturalsource.organelle ? _em_entity_assembly_naturalsource.organ ? _em_entity_assembly_naturalsource.strain ? _em_entity_assembly_naturalsource.tissue ? _em_entity_assembly_naturalsource.details ? # _em_helical_entity.id 1 _em_helical_entity.image_processing_id 1 _em_helical_entity.details ? _em_helical_entity.axial_symmetry C1 _em_helical_entity.angular_rotation_per_subunit -0.7 _em_helical_entity.axial_rise_per_subunit 4.83 # _em_image_processing.details ? _em_image_processing.id 1 _em_image_processing.image_recording_id 1 # _em_image_recording.average_exposure_time ? _em_image_recording.avg_electron_dose_per_subtomogram ? _em_image_recording.avg_electron_dose_per_image 59.495 _em_image_recording.details ? _em_image_recording.detector_mode ? _em_image_recording.film_or_detector_model 'GATAN K3 BIOQUANTUM (6k x 4k)' _em_image_recording.id 1 _em_image_recording.imaging_id 1 _em_image_recording.num_diffraction_images ? _em_image_recording.num_grids_imaged ? _em_image_recording.num_real_images ? # loop_ _em_software.category _em_software.details _em_software.id _em_software.image_processing_id _em_software.fitting_id _em_software.imaging_id _em_software.name _em_software.version 'PARTICLE SELECTION' ? 1 1 ? ? RELION 4.0 'IMAGE ACQUISITION' ? 2 ? ? 1 ? ? MASKING ? 3 ? ? ? ? ? 'CTF CORRECTION' ? 4 1 ? ? ? ? 'LAYERLINE INDEXING' ? 5 ? ? ? ? ? 'DIFFRACTION INDEXING' ? 6 ? ? ? ? ? 'MODEL FITTING' ? 7 ? 1 ? ? ? OTHER ? 8 ? ? ? ? ? 'MODEL REFINEMENT' ? 9 ? 1 ? PHENIX ? 'INITIAL EULER ASSIGNMENT' ? 10 1 ? ? ? ? 'FINAL EULER ASSIGNMENT' ? 11 1 ? ? ? ? CLASSIFICATION ? 12 1 ? ? ? ? RECONSTRUCTION ? 13 1 ? ? ? ? # _em_specimen.concentration 4.5 _em_specimen.details ? _em_specimen.embedding_applied NO _em_specimen.experiment_id 1 _em_specimen.id 1 _em_specimen.shadowing_applied NO _em_specimen.staining_applied NO _em_specimen.vitrification_applied YES # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'National Institutes of Health/National Institute on Aging (NIH/NIA)' 'United States' 'R01 AG074570' 1 'National Science Foundation (NSF, United States)' 'United States' CHE2109008 2 # _atom_sites.entry_id 9DME _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.Cartn_transform_axes ? _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C N O S # loop_ #