data_9DNR # _entry.id 9DNR # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.404 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 9DNR pdb_00009dnr 10.2210/pdb9dnr/pdb WWPDB D_1000288526 ? ? # _pdbx_audit_revision_history.ordinal 1 _pdbx_audit_revision_history.data_content_type 'Structure model' _pdbx_audit_revision_history.major_revision 1 _pdbx_audit_revision_history.minor_revision 0 _pdbx_audit_revision_history.revision_date 2025-08-13 _pdbx_audit_revision_history.part_number ? # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 9DNR _pdbx_database_status.recvd_initial_deposition_date 2024-09-17 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _pdbx_database_related.db_name _pdbx_database_related.details _pdbx_database_related.db_id _pdbx_database_related.content_type PDB . 9DNO unspecified PDB . 9DNP unspecified PDB . 9DNQ unspecified # _pdbx_contact_author.id 3 _pdbx_contact_author.email yuc020@health.ucsd.edu _pdbx_contact_author.name_first Yuan _pdbx_contact_author.name_last Chen _pdbx_contact_author.name_mi ? _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0002-1510-182X # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Huang, S.' 1 0000-0003-3862-564X 'Wu, J.' 2 0000-0002-8031-9462 'Taylor, S.' 3 0000-0002-7702-6108 'Chen, Y.' 4 0000-0002-1510-182X # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country ? _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'To Be Published' _citation.journal_id_ASTM ? _citation.journal_id_CSD 0353 _citation.journal_id_ISSN ? _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume ? _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title 'Structural Flexibility and Selectivity of N-End Rule Ligases' _citation.year ? _citation.database_id_CSD ? _citation.pdbx_database_id_DOI ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Huang, S.' 1 0000-0003-3862-564X primary 'Wu, J.' 2 0000-0002-8031-9462 primary 'Taylor, S.' 3 0000-0002-7702-6108 primary 'Chen, Y.' 4 0000-0002-1510-182X # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'E3 ubiquitin-protein ligase UBR2' 7825.902 1 ? ? 'UBR-box domain (UNP residues 98-167)' ? 2 polymer syn ARG-TRP-PHE-NH2 506.600 1 ? ? ? ? 3 non-polymer syn 'ZINC ION' 65.409 3 ? ? ? ? 4 water nat water 18.015 95 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'N-recognin-2,Ubiquitin-protein ligase E3-alpha-2,Ubiquitin-protein ligase E3-alpha-II' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no LCGRVFKVGEPTYSCRDCAVDPTCVLCMECFLGSIHRDHRYRMTTSGGGGFCDCGDTEAWKEGPYCQKHE LCGRVFKVGEPTYSCRDCAVDPTCVLCMECFLGSIHRDHRYRMTTSGGGGFCDCGDTEAWKEGPYCQKHE A ? 2 'polypeptide(L)' no yes 'RWF(NH2)' RWFX C ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 'ZINC ION' ZN 4 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 LEU n 1 2 CYS n 1 3 GLY n 1 4 ARG n 1 5 VAL n 1 6 PHE n 1 7 LYS n 1 8 VAL n 1 9 GLY n 1 10 GLU n 1 11 PRO n 1 12 THR n 1 13 TYR n 1 14 SER n 1 15 CYS n 1 16 ARG n 1 17 ASP n 1 18 CYS n 1 19 ALA n 1 20 VAL n 1 21 ASP n 1 22 PRO n 1 23 THR n 1 24 CYS n 1 25 VAL n 1 26 LEU n 1 27 CYS n 1 28 MET n 1 29 GLU n 1 30 CYS n 1 31 PHE n 1 32 LEU n 1 33 GLY n 1 34 SER n 1 35 ILE n 1 36 HIS n 1 37 ARG n 1 38 ASP n 1 39 HIS n 1 40 ARG n 1 41 TYR n 1 42 ARG n 1 43 MET n 1 44 THR n 1 45 THR n 1 46 SER n 1 47 GLY n 1 48 GLY n 1 49 GLY n 1 50 GLY n 1 51 PHE n 1 52 CYS n 1 53 ASP n 1 54 CYS n 1 55 GLY n 1 56 ASP n 1 57 THR n 1 58 GLU n 1 59 ALA n 1 60 TRP n 1 61 LYS n 1 62 GLU n 1 63 GLY n 1 64 PRO n 1 65 TYR n 1 66 CYS n 1 67 GLN n 1 68 LYS n 1 69 HIS n 1 70 GLU n 2 1 ARG n 2 2 TRP n 2 3 PHE n 2 4 NH2 n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 70 _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'UBR2, C6orf133, KIAA0349' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details 'Amp resistance, N-terminal GST tag' _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pGEX-6p-1-hUBR2-UBRbox _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _pdbx_entity_src_syn.entity_id 2 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 4 _pdbx_entity_src_syn.organism_scientific 'synthetic construct' _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 32630 _pdbx_entity_src_syn.details ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NH2 non-polymer . 'AMINO GROUP' ? 'H2 N' 16.023 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 ZN non-polymer . 'ZINC ION' ? 'Zn 2' 65.409 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 LEU 1 98 98 LEU LEU A . n A 1 2 CYS 2 99 99 CYS CYS A . n A 1 3 GLY 3 100 100 GLY GLY A . n A 1 4 ARG 4 101 101 ARG ARG A . n A 1 5 VAL 5 102 102 VAL VAL A . n A 1 6 PHE 6 103 103 PHE PHE A . n A 1 7 LYS 7 104 104 LYS LYS A . n A 1 8 VAL 8 105 105 VAL VAL A . n A 1 9 GLY 9 106 106 GLY GLY A . n A 1 10 GLU 10 107 107 GLU GLU A . n A 1 11 PRO 11 108 108 PRO PRO A . n A 1 12 THR 12 109 109 THR THR A . n A 1 13 TYR 13 110 110 TYR TYR A . n A 1 14 SER 14 111 111 SER SER A . n A 1 15 CYS 15 112 112 CYS CYS A . n A 1 16 ARG 16 113 113 ARG ARG A . n A 1 17 ASP 17 114 114 ASP ASP A . n A 1 18 CYS 18 115 115 CYS CYS A . n A 1 19 ALA 19 116 116 ALA ALA A . n A 1 20 VAL 20 117 117 VAL VAL A . n A 1 21 ASP 21 118 118 ASP ASP A . n A 1 22 PRO 22 119 119 PRO PRO A . n A 1 23 THR 23 120 120 THR THR A . n A 1 24 CYS 24 121 121 CYS CYS A . n A 1 25 VAL 25 122 122 VAL VAL A . n A 1 26 LEU 26 123 123 LEU LEU A . n A 1 27 CYS 27 124 124 CYS CYS A . n A 1 28 MET 28 125 125 MET MET A . n A 1 29 GLU 29 126 126 GLU GLU A . n A 1 30 CYS 30 127 127 CYS CYS A . n A 1 31 PHE 31 128 128 PHE PHE A . n A 1 32 LEU 32 129 129 LEU LEU A . n A 1 33 GLY 33 130 130 GLY GLY A . n A 1 34 SER 34 131 131 SER SER A . n A 1 35 ILE 35 132 132 ILE ILE A . n A 1 36 HIS 36 133 133 HIS HIS A . n A 1 37 ARG 37 134 134 ARG ARG A . n A 1 38 ASP 38 135 135 ASP ASP A . n A 1 39 HIS 39 136 136 HIS HIS A . n A 1 40 ARG 40 137 137 ARG ARG A . n A 1 41 TYR 41 138 138 TYR TYR A . n A 1 42 ARG 42 139 139 ARG ARG A . n A 1 43 MET 43 140 140 MET MET A . n A 1 44 THR 44 141 141 THR THR A . n A 1 45 THR 45 142 142 THR THR A . n A 1 46 SER 46 143 143 SER SER A . n A 1 47 GLY 47 144 144 GLY GLY A . n A 1 48 GLY 48 145 145 GLY GLY A . n A 1 49 GLY 49 146 146 GLY GLY A . n A 1 50 GLY 50 147 147 GLY GLY A . n A 1 51 PHE 51 148 148 PHE PHE A . n A 1 52 CYS 52 149 149 CYS CYS A . n A 1 53 ASP 53 150 150 ASP ASP A . n A 1 54 CYS 54 151 151 CYS CYS A . n A 1 55 GLY 55 152 152 GLY GLY A . n A 1 56 ASP 56 153 153 ASP ASP A . n A 1 57 THR 57 154 154 THR THR A . n A 1 58 GLU 58 155 155 GLU GLU A . n A 1 59 ALA 59 156 156 ALA ALA A . n A 1 60 TRP 60 157 157 TRP TRP A . n A 1 61 LYS 61 158 158 LYS LYS A . n A 1 62 GLU 62 159 159 GLU GLU A . n A 1 63 GLY 63 160 160 GLY GLY A . n A 1 64 PRO 64 161 161 PRO PRO A . n A 1 65 TYR 65 162 162 TYR TYR A . n A 1 66 CYS 66 163 163 CYS CYS A . n A 1 67 GLN 67 164 164 GLN GLN A . n A 1 68 LYS 68 165 165 LYS LYS A . n A 1 69 HIS 69 166 166 HIS HIS A . n A 1 70 GLU 70 167 167 GLU GLU A . n B 2 1 ARG 1 1 1 ARG ARG C . n B 2 2 TRP 2 2 2 TRP TRP C . n B 2 3 PHE 3 3 3 PHE PHE C . n B 2 4 NH2 4 4 4 NH2 PHE C . n # _pdbx_entity_instance_feature.ordinal 1 _pdbx_entity_instance_feature.comp_id ZN _pdbx_entity_instance_feature.asym_id ? _pdbx_entity_instance_feature.seq_num ? _pdbx_entity_instance_feature.auth_comp_id ZN _pdbx_entity_instance_feature.auth_asym_id ? _pdbx_entity_instance_feature.auth_seq_num ? _pdbx_entity_instance_feature.feature_type 'SUBJECT OF INVESTIGATION' _pdbx_entity_instance_feature.details ? # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 ZN 1 201 1 ZN ZN A . D 3 ZN 1 202 2 ZN ZN A . E 3 ZN 1 203 3 ZN ZN A . F 4 HOH 1 301 36 HOH HOH A . F 4 HOH 2 302 59 HOH HOH A . F 4 HOH 3 303 56 HOH HOH A . F 4 HOH 4 304 9 HOH HOH A . F 4 HOH 5 305 57 HOH HOH A . F 4 HOH 6 306 20 HOH HOH A . F 4 HOH 7 307 73 HOH HOH A . F 4 HOH 8 308 4 HOH HOH A . F 4 HOH 9 309 33 HOH HOH A . F 4 HOH 10 310 21 HOH HOH A . F 4 HOH 11 311 38 HOH HOH A . F 4 HOH 12 312 16 HOH HOH A . F 4 HOH 13 313 51 HOH HOH A . F 4 HOH 14 314 18 HOH HOH A . F 4 HOH 15 315 55 HOH HOH A . F 4 HOH 16 316 27 HOH HOH A . F 4 HOH 17 317 69 HOH HOH A . F 4 HOH 18 318 44 HOH HOH A . F 4 HOH 19 319 5 HOH HOH A . F 4 HOH 20 320 6 HOH HOH A . F 4 HOH 21 321 42 HOH HOH A . F 4 HOH 22 322 3 HOH HOH A . F 4 HOH 23 323 7 HOH HOH A . F 4 HOH 24 324 1 HOH HOH A . F 4 HOH 25 325 19 HOH HOH A . F 4 HOH 26 326 32 HOH HOH A . F 4 HOH 27 327 89 HOH HOH A . F 4 HOH 28 328 39 HOH HOH A . F 4 HOH 29 329 24 HOH HOH A . F 4 HOH 30 330 17 HOH HOH A . F 4 HOH 31 331 23 HOH HOH A . F 4 HOH 32 332 53 HOH HOH A . F 4 HOH 33 333 35 HOH HOH A . F 4 HOH 34 334 13 HOH HOH A . F 4 HOH 35 335 71 HOH HOH A . F 4 HOH 36 336 46 HOH HOH A . F 4 HOH 37 337 2 HOH HOH A . F 4 HOH 38 338 8 HOH HOH A . F 4 HOH 39 339 22 HOH HOH A . F 4 HOH 40 340 26 HOH HOH A . F 4 HOH 41 341 15 HOH HOH A . F 4 HOH 42 342 34 HOH HOH A . F 4 HOH 43 343 63 HOH HOH A . F 4 HOH 44 344 93 HOH HOH A . F 4 HOH 45 345 52 HOH HOH A . F 4 HOH 46 346 77 HOH HOH A . F 4 HOH 47 347 14 HOH HOH A . F 4 HOH 48 348 28 HOH HOH A . F 4 HOH 49 349 92 HOH HOH A . F 4 HOH 50 350 83 HOH HOH A . F 4 HOH 51 351 40 HOH HOH A . F 4 HOH 52 352 11 HOH HOH A . F 4 HOH 53 353 94 HOH HOH A . F 4 HOH 54 354 30 HOH HOH A . F 4 HOH 55 355 87 HOH HOH A . F 4 HOH 56 356 65 HOH HOH A . F 4 HOH 57 357 91 HOH HOH A . F 4 HOH 58 358 66 HOH HOH A . F 4 HOH 59 359 29 HOH HOH A . F 4 HOH 60 360 79 HOH HOH A . F 4 HOH 61 361 95 HOH HOH A . F 4 HOH 62 362 58 HOH HOH A . F 4 HOH 63 363 81 HOH HOH A . F 4 HOH 64 364 41 HOH HOH A . F 4 HOH 65 365 25 HOH HOH A . F 4 HOH 66 366 31 HOH HOH A . F 4 HOH 67 367 10 HOH HOH A . F 4 HOH 68 368 48 HOH HOH A . F 4 HOH 69 369 85 HOH HOH A . F 4 HOH 70 370 88 HOH HOH A . F 4 HOH 71 371 78 HOH HOH A . F 4 HOH 72 372 60 HOH HOH A . F 4 HOH 73 373 86 HOH HOH A . F 4 HOH 74 374 61 HOH HOH A . F 4 HOH 75 375 90 HOH HOH A . F 4 HOH 76 376 47 HOH HOH A . F 4 HOH 77 377 70 HOH HOH A . F 4 HOH 78 378 72 HOH HOH A . F 4 HOH 79 379 50 HOH HOH A . F 4 HOH 80 380 49 HOH HOH A . F 4 HOH 81 381 74 HOH HOH A . F 4 HOH 82 382 84 HOH HOH A . F 4 HOH 83 383 12 HOH HOH A . F 4 HOH 84 384 45 HOH HOH A . F 4 HOH 85 385 62 HOH HOH A . F 4 HOH 86 386 43 HOH HOH A . F 4 HOH 87 387 54 HOH HOH A . F 4 HOH 88 388 67 HOH HOH A . F 4 HOH 89 389 37 HOH HOH A . F 4 HOH 90 390 76 HOH HOH A . F 4 HOH 91 391 68 HOH HOH A . F 4 HOH 92 392 75 HOH HOH A . F 4 HOH 93 393 64 HOH HOH A . F 4 HOH 94 394 80 HOH HOH A . F 4 HOH 95 395 82 HOH HOH A . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 C TRP 2 ? CG ? B TRP 2 CG 2 1 Y 1 C TRP 2 ? CD1 ? B TRP 2 CD1 3 1 Y 1 C TRP 2 ? CD2 ? B TRP 2 CD2 4 1 Y 1 C TRP 2 ? NE1 ? B TRP 2 NE1 5 1 Y 1 C TRP 2 ? CE2 ? B TRP 2 CE2 6 1 Y 1 C TRP 2 ? CE3 ? B TRP 2 CE3 7 1 Y 1 C TRP 2 ? CZ2 ? B TRP 2 CZ2 8 1 Y 1 C TRP 2 ? CZ3 ? B TRP 2 CZ3 9 1 Y 1 C TRP 2 ? CH2 ? B TRP 2 CH2 10 1 Y 1 C PHE 3 ? CG ? B PHE 3 CG 11 1 Y 1 C PHE 3 ? CD1 ? B PHE 3 CD1 12 1 Y 1 C PHE 3 ? CD2 ? B PHE 3 CD2 13 1 Y 1 C PHE 3 ? CE1 ? B PHE 3 CE1 14 1 Y 1 C PHE 3 ? CE2 ? B PHE 3 CE2 15 1 Y 1 C PHE 3 ? CZ ? B PHE 3 CZ # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? '(1.20.1_4487: ???)' 1 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? . 2 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? DIALS ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 4 # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 109.56 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 9DNR _cell.details ? _cell.formula_units_Z ? _cell.length_a 29.235 _cell.length_a_esd ? _cell.length_b 36.957 _cell.length_b_esd ? _cell.length_c 29.615 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 2 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 9DNR _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 9DNR _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 1.81 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 32.01 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? _exptl_crystal.pdbx_mosaic_method ? _exptl_crystal.pdbx_mosaic_block_size ? _exptl_crystal.pdbx_mosaic_block_size_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 6.3 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details ;For UBR2UBR-RWF co-crystal, the ligand to protein molar ratio is 1:5 and the reservoir contains 0.1 M Bis-Tris pH6.3 with 29% PEG 3350. The stock concentration of UBR2UBR for co-crystallization is 6.2 mg/ml. ; _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.temp 293.15 # _diffrn.ambient_environment ? _diffrn.ambient_temp 77 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS PILATUS3 6M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2022-11-08 _diffrn_detector.pdbx_frequency ? _diffrn_detector.id ? _diffrn_detector.number_of_axes ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97648 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'ALS BEAMLINE 8.2.1' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.97648 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline 8.2.1 _diffrn_source.pdbx_synchrotron_site ALS # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 9DNR _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.22 _reflns.d_resolution_low 50.00 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 17252 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 96.4 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 4.1 _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 23.2 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared 1.701 _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all 0.079 _reflns.pdbx_Rpim_I_all 0.037 _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all 71322 _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.994 _reflns.pdbx_CC_star 0.998 _reflns.pdbx_R_split ? _reflns.pdbx_Rmerge_I_obs 0.070 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_CC_split_method ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_1 ? _reflns.pdbx_aniso_diffraction_limit_2 ? _reflns.pdbx_aniso_diffraction_limit_3 ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvalue_1 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_2 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_3 ? _reflns.pdbx_orthogonalization_convention ? _reflns.pdbx_percent_possible_ellipsoidal ? _reflns.pdbx_percent_possible_spherical ? _reflns.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns.pdbx_percent_possible_spherical_anomalous ? _reflns.pdbx_redundancy_anomalous ? _reflns.pdbx_CC_half_anomalous ? _reflns.pdbx_absDiff_over_sigma_anomalous ? _reflns.pdbx_percent_possible_anomalous ? _reflns.pdbx_observed_signal_threshold ? _reflns.pdbx_signal_type ? _reflns.pdbx_signal_details ? _reflns.pdbx_signal_software_id ? # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.meanI_over_sigI_all _reflns_shell.meanI_over_sigI_obs _reflns_shell.number_measured_all _reflns_shell.number_measured_obs _reflns_shell.number_possible _reflns_shell.number_unique_all _reflns_shell.number_unique_obs _reflns_shell.percent_possible_obs _reflns_shell.Rmerge_F_all _reflns_shell.Rmerge_F_obs _reflns_shell.meanI_over_sigI_gt _reflns_shell.meanI_over_uI_all _reflns_shell.meanI_over_uI_gt _reflns_shell.number_measured_gt _reflns_shell.number_unique_gt _reflns_shell.percent_possible_gt _reflns_shell.Rmerge_F_gt _reflns_shell.Rmerge_I_gt _reflns_shell.pdbx_redundancy _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_netI_over_sigmaI_all _reflns_shell.pdbx_netI_over_sigmaI_obs _reflns_shell.pdbx_Rrim_I_all _reflns_shell.pdbx_Rpim_I_all _reflns_shell.pdbx_rejects _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id _reflns_shell.pdbx_CC_half _reflns_shell.pdbx_CC_star _reflns_shell.pdbx_R_split _reflns_shell.percent_possible_all _reflns_shell.Rmerge_I_all _reflns_shell.Rmerge_I_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_percent_possible_ellipsoidal _reflns_shell.pdbx_percent_possible_spherical _reflns_shell.pdbx_percent_possible_ellipsoidal_anomalous _reflns_shell.pdbx_percent_possible_spherical_anomalous _reflns_shell.pdbx_redundancy_anomalous _reflns_shell.pdbx_CC_half_anomalous _reflns_shell.pdbx_absDiff_over_sigma_anomalous _reflns_shell.pdbx_percent_possible_anomalous 1.22 1.24 ? ? ? ? ? ? 718 ? ? ? ? ? ? ? ? ? ? ? 3.8 1.847 ? ? 0.197 0.093 ? 1 1 0.951 0.987 ? 81.2 ? 0.173 ? ? ? ? ? ? ? ? ? 1.24 1.26 ? ? ? ? ? ? 813 ? ? ? ? ? ? ? ? ? ? ? 4.1 1.745 ? ? 0.198 0.090 ? 2 1 0.975 0.994 ? 92.8 ? 0.175 ? ? ? ? ? ? ? ? ? 1.26 1.29 ? ? ? ? ? ? 860 ? ? ? ? ? ? ? ? ? ? ? 4.1 1.671 ? ? 0.186 0.085 ? 3 1 0.980 0.995 ? 95.8 ? 0.165 ? ? ? ? ? ? ? ? ? 1.29 1.31 ? ? ? ? ? ? 868 ? ? ? ? ? ? ? ? ? ? ? 4.1 1.653 ? ? 0.182 0.083 ? 4 1 0.977 0.994 ? 96.9 ? 0.161 ? ? ? ? ? ? ? ? ? 1.31 1.34 ? ? ? ? ? ? 855 ? ? ? ? ? ? ? ? ? ? ? 4.2 1.635 ? ? 0.193 0.087 ? 5 1 0.970 0.992 ? 97.9 ? 0.172 ? ? ? ? ? ? ? ? ? 1.34 1.37 ? ? ? ? ? ? 877 ? ? ? ? ? ? ? ? ? ? ? 4.2 1.734 ? ? 0.183 0.083 ? 6 1 0.979 0.995 ? 98.4 ? 0.163 ? ? ? ? ? ? ? ? ? 1.37 1.41 ? ? ? ? ? ? 874 ? ? ? ? ? ? ? ? ? ? ? 4.1 1.700 ? ? 0.177 0.080 ? 7 1 0.979 0.995 ? 97.7 ? 0.157 ? ? ? ? ? ? ? ? ? 1.41 1.45 ? ? ? ? ? ? 857 ? ? ? ? ? ? ? ? ? ? ? 3.8 1.744 ? ? 0.172 0.079 ? 8 1 0.974 0.993 ? 97.2 ? 0.152 ? ? ? ? ? ? ? ? ? 1.45 1.49 ? ? ? ? ? ? 843 ? ? ? ? ? ? ? ? ? ? ? 3.8 1.749 ? ? 0.151 0.070 ? 9 1 0.980 0.995 ? 94.3 ? 0.133 ? ? ? ? ? ? ? ? ? 1.49 1.54 ? ? ? ? ? ? 886 ? ? ? ? ? ? ? ? ? ? ? 4.4 1.676 ? ? 0.148 0.067 ? 10 1 0.985 0.996 ? 98.6 ? 0.132 ? ? ? ? ? ? ? ? ? 1.54 1.59 ? ? ? ? ? ? 862 ? ? ? ? ? ? ? ? ? ? ? 4.4 1.729 ? ? 0.140 0.063 ? 11 1 0.981 0.995 ? 98.3 ? 0.125 ? ? ? ? ? ? ? ? ? 1.59 1.66 ? ? ? ? ? ? 887 ? ? ? ? ? ? ? ? ? ? ? 4.4 1.650 ? ? 0.131 0.059 ? 12 1 0.985 0.996 ? 98.7 ? 0.117 ? ? ? ? ? ? ? ? ? 1.66 1.73 ? ? ? ? ? ? 902 ? ? ? ? ? ? ? ? ? ? ? 4.2 1.715 ? ? 0.121 0.055 ? 13 1 0.987 0.997 ? 98.6 ? 0.107 ? ? ? ? ? ? ? ? ? 1.73 1.82 ? ? ? ? ? ? 867 ? ? ? ? ? ? ? ? ? ? ? 4.2 1.636 ? ? 0.108 0.049 ? 14 1 0.988 0.997 ? 98.9 ? 0.096 ? ? ? ? ? ? ? ? ? 1.82 1.94 ? ? ? ? ? ? 863 ? ? ? ? ? ? ? ? ? ? ? 3.9 1.640 ? ? 0.099 0.046 ? 15 1 0.992 0.998 ? 96.2 ? 0.087 ? ? ? ? ? ? ? ? ? 1.94 2.09 ? ? ? ? ? ? 864 ? ? ? ? ? ? ? ? ? ? ? 3.9 1.718 ? ? 0.085 0.040 ? 16 1 0.993 0.998 ? 96.1 ? 0.074 ? ? ? ? ? ? ? ? ? 2.09 2.30 ? ? ? ? ? ? 887 ? ? ? ? ? ? ? ? ? ? ? 4.4 1.625 ? ? 0.077 0.035 ? 17 1 0.995 0.999 ? 99.1 ? 0.069 ? ? ? ? ? ? ? ? ? 2.30 2.63 ? ? ? ? ? ? 892 ? ? ? ? ? ? ? ? ? ? ? 4.4 1.646 ? ? 0.068 0.031 ? 18 1 0.994 0.998 ? 98.7 ? 0.061 ? ? ? ? ? ? ? ? ? 2.63 3.31 ? ? ? ? ? ? 898 ? ? ? ? ? ? ? ? ? ? ? 4.1 1.624 ? ? 0.055 0.026 ? 19 1 0.996 0.999 ? 98.4 ? 0.048 ? ? ? ? ? ? ? ? ? 3.31 50.00 ? ? ? ? ? ? 879 ? ? ? ? ? ? ? ? ? ? ? 4.1 1.949 ? ? 0.042 0.020 ? 20 1 0.997 0.999 ? 94.6 ? 0.037 ? ? ? ? ? ? ? ? ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean ? _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 9DNR _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 1.22 _refine.ls_d_res_low 27.91 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 17238 _refine.ls_number_reflns_R_free 866 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 96.91 _refine.ls_percent_reflns_R_free 5.02 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1682 _refine.ls_R_factor_R_free 0.1799 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.1676 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.44 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.10 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 17.43 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.11 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 562 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 3 _refine_hist.number_atoms_solvent 95 _refine_hist.number_atoms_total 660 _refine_hist.d_res_high 1.22 _refine_hist.d_res_low 27.91 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.007 ? 574 ? f_bond_d ? ? 'X-RAY DIFFRACTION' ? 0.955 ? 771 ? f_angle_d ? ? 'X-RAY DIFFRACTION' ? 6.361 ? 81 ? f_dihedral_angle_d ? ? 'X-RAY DIFFRACTION' ? 0.085 ? 77 ? f_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.008 ? 103 ? f_plane_restr ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_R_complete _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free _refine_ls_shell.R_factor_R_free 'X-RAY DIFFRACTION' 1.22 1.30 . . 141 2607 94.00 . . . . 0.1906 . . . . . . . . . . . 0.1989 'X-RAY DIFFRACTION' 1.30 1.40 . . 146 2751 98.00 . . . . 0.1821 . . . . . . . . . . . 0.1888 'X-RAY DIFFRACTION' 1.40 1.54 . . 132 2723 97.00 . . . . 0.1752 . . . . . . . . . . . 0.1966 'X-RAY DIFFRACTION' 1.54 1.76 . . 160 2743 99.00 . . . . 0.1533 . . . . . . . . . . . 0.1611 'X-RAY DIFFRACTION' 1.76 2.22 . . 140 2736 97.00 . . . . 0.1701 . . . . . . . . . . . 0.1806 'X-RAY DIFFRACTION' 2.22 27.91 . . 147 2812 97.00 . . . . 0.1619 . . . . . . . . . . . 0.1775 # _struct.entry_id 9DNR _struct.title 'Structure of UBR2-RWF complex' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 9DNR _struct_keywords.text 'UBR, E3 ligase, natural ligands, PROTEIN BINDING' _struct_keywords.pdbx_keywords 'PROTEIN BINDING' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? E N N 3 ? F N N 4 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 UNP UBR2_HUMAN Q8IWV8 ? 1 LCGRVFKVGEPTYSCRDCAVDPTCVLCMECFLGSIHRDHRYRMTTSGGGGFCDCGDTEAWKEGPYCQKHE 98 2 PDB 9DNR 9DNR ? 2 ? 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 9DNR A 1 ? 70 ? Q8IWV8 98 ? 167 ? 98 167 2 2 9DNR C 1 ? 4 ? 9DNR 1 ? 4 ? 1 4 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 740 ? 1 MORE -1 ? 1 'SSA (A^2)' 4150 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'gel filtration' _pdbx_struct_assembly_auth_evidence.details 'Single peak observed during size exclusion chromatography purification' # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 CYS A 27 ? GLY A 33 ? CYS A 124 GLY A 130 1 ? 7 HELX_P HELX_P2 AA2 SER A 34 ? HIS A 39 ? SER A 131 HIS A 136 5 ? 6 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? B PHE 3 C ? ? ? 1_555 B NH2 4 N ? ? C PHE 3 C NH2 4 1_555 ? ? ? ? ? ? ? 1.329 ? ? metalc1 metalc ? ? A CYS 2 SG ? ? ? 1_555 C ZN . ZN ? ? A CYS 99 A ZN 201 1_555 ? ? ? ? ? ? ? 2.307 ? ? metalc2 metalc ? ? A CYS 15 SG ? ? ? 1_555 E ZN . ZN ? ? A CYS 112 A ZN 203 1_555 ? ? ? ? ? ? ? 2.327 ? ? metalc3 metalc ? ? A CYS 18 SG ? ? ? 1_555 E ZN . ZN ? ? A CYS 115 A ZN 203 1_555 ? ? ? ? ? ? ? 2.296 ? ? metalc4 metalc ? ? A CYS 27 SG ? ? ? 1_555 C ZN . ZN ? ? A CYS 124 A ZN 201 1_555 ? ? ? ? ? ? ? 2.326 ? ? metalc5 metalc ? ? A CYS 30 SG ? ? ? 1_555 C ZN . ZN ? ? A CYS 127 A ZN 201 1_555 ? ? ? ? ? ? ? 2.385 ? ? metalc6 metalc ? ? A CYS 30 SG ? ? ? 1_555 D ZN . ZN ? ? A CYS 127 A ZN 202 1_555 ? ? ? ? ? ? ? 2.349 ? ? metalc7 metalc ? ? A HIS 36 ND1 ? ? ? 1_555 E ZN . ZN ? ? A HIS 133 A ZN 203 1_555 ? ? ? ? ? ? ? 2.050 ? ? metalc8 metalc ? ? A HIS 39 ND1 ? ? ? 1_555 E ZN . ZN ? ? A HIS 136 A ZN 203 1_555 ? ? ? ? ? ? ? 2.068 ? ? metalc9 metalc ? ? A CYS 52 SG ? ? ? 1_555 C ZN . ZN ? ? A CYS 149 A ZN 201 1_555 ? ? ? ? ? ? ? 2.341 ? ? metalc10 metalc ? ? A CYS 54 SG ? ? ? 1_555 D ZN . ZN ? ? A CYS 151 A ZN 202 1_555 ? ? ? ? ? ? ? 2.316 ? ? metalc11 metalc ? ? A CYS 66 SG ? ? ? 1_555 D ZN . ZN ? ? A CYS 163 A ZN 202 1_555 ? ? ? ? ? ? ? 2.334 ? ? metalc12 metalc ? ? A HIS 69 ND1 ? ? ? 1_555 D ZN . ZN ? ? A HIS 166 A ZN 202 1_555 ? ? ? ? ? ? ? 2.064 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 SG ? A CYS 2 ? A CYS 99 ? 1_555 ZN ? C ZN . ? A ZN 201 ? 1_555 SG ? A CYS 27 ? A CYS 124 ? 1_555 113.0 ? 2 SG ? A CYS 2 ? A CYS 99 ? 1_555 ZN ? C ZN . ? A ZN 201 ? 1_555 SG ? A CYS 30 ? A CYS 127 ? 1_555 105.6 ? 3 SG ? A CYS 27 ? A CYS 124 ? 1_555 ZN ? C ZN . ? A ZN 201 ? 1_555 SG ? A CYS 30 ? A CYS 127 ? 1_555 97.7 ? 4 SG ? A CYS 2 ? A CYS 99 ? 1_555 ZN ? C ZN . ? A ZN 201 ? 1_555 SG ? A CYS 52 ? A CYS 149 ? 1_555 113.2 ? 5 SG ? A CYS 27 ? A CYS 124 ? 1_555 ZN ? C ZN . ? A ZN 201 ? 1_555 SG ? A CYS 52 ? A CYS 149 ? 1_555 114.8 ? 6 SG ? A CYS 30 ? A CYS 127 ? 1_555 ZN ? C ZN . ? A ZN 201 ? 1_555 SG ? A CYS 52 ? A CYS 149 ? 1_555 111.0 ? 7 SG ? A CYS 15 ? A CYS 112 ? 1_555 ZN ? E ZN . ? A ZN 203 ? 1_555 SG ? A CYS 18 ? A CYS 115 ? 1_555 116.7 ? 8 SG ? A CYS 15 ? A CYS 112 ? 1_555 ZN ? E ZN . ? A ZN 203 ? 1_555 ND1 ? A HIS 36 ? A HIS 133 ? 1_555 110.7 ? 9 SG ? A CYS 18 ? A CYS 115 ? 1_555 ZN ? E ZN . ? A ZN 203 ? 1_555 ND1 ? A HIS 36 ? A HIS 133 ? 1_555 102.5 ? 10 SG ? A CYS 15 ? A CYS 112 ? 1_555 ZN ? E ZN . ? A ZN 203 ? 1_555 ND1 ? A HIS 39 ? A HIS 136 ? 1_555 111.6 ? 11 SG ? A CYS 18 ? A CYS 115 ? 1_555 ZN ? E ZN . ? A ZN 203 ? 1_555 ND1 ? A HIS 39 ? A HIS 136 ? 1_555 103.9 ? 12 ND1 ? A HIS 36 ? A HIS 133 ? 1_555 ZN ? E ZN . ? A ZN 203 ? 1_555 ND1 ? A HIS 39 ? A HIS 136 ? 1_555 110.9 ? 13 SG ? A CYS 30 ? A CYS 127 ? 1_555 ZN ? D ZN . ? A ZN 202 ? 1_555 SG ? A CYS 54 ? A CYS 151 ? 1_555 112.9 ? 14 SG ? A CYS 30 ? A CYS 127 ? 1_555 ZN ? D ZN . ? A ZN 202 ? 1_555 SG ? A CYS 66 ? A CYS 163 ? 1_555 111.1 ? 15 SG ? A CYS 54 ? A CYS 151 ? 1_555 ZN ? D ZN . ? A ZN 202 ? 1_555 SG ? A CYS 66 ? A CYS 163 ? 1_555 114.8 ? 16 SG ? A CYS 30 ? A CYS 127 ? 1_555 ZN ? D ZN . ? A ZN 202 ? 1_555 ND1 ? A HIS 69 ? A HIS 166 ? 1_555 103.3 ? 17 SG ? A CYS 54 ? A CYS 151 ? 1_555 ZN ? D ZN . ? A ZN 202 ? 1_555 ND1 ? A HIS 69 ? A HIS 166 ? 1_555 113.3 ? 18 SG ? A CYS 66 ? A CYS 163 ? 1_555 ZN ? D ZN . ? A ZN 202 ? 1_555 ND1 ? A HIS 69 ? A HIS 166 ? 1_555 100.2 ? # _pdbx_modification_feature.ordinal 1 _pdbx_modification_feature.label_comp_id NH2 _pdbx_modification_feature.label_asym_id B _pdbx_modification_feature.label_seq_id 4 _pdbx_modification_feature.label_alt_id ? _pdbx_modification_feature.modified_residue_label_comp_id PHE _pdbx_modification_feature.modified_residue_label_asym_id B _pdbx_modification_feature.modified_residue_label_seq_id 3 _pdbx_modification_feature.modified_residue_label_alt_id ? _pdbx_modification_feature.auth_comp_id NH2 _pdbx_modification_feature.auth_asym_id C _pdbx_modification_feature.auth_seq_id 4 _pdbx_modification_feature.PDB_ins_code ? _pdbx_modification_feature.symmetry 1_555 _pdbx_modification_feature.modified_residue_auth_comp_id PHE _pdbx_modification_feature.modified_residue_auth_asym_id C _pdbx_modification_feature.modified_residue_auth_seq_id 3 _pdbx_modification_feature.modified_residue_PDB_ins_code ? _pdbx_modification_feature.modified_residue_symmetry 1_555 _pdbx_modification_feature.comp_id_linking_atom . _pdbx_modification_feature.modified_residue_id_linking_atom . _pdbx_modification_feature.modified_residue_id PHE _pdbx_modification_feature.ref_pcm_id 15 _pdbx_modification_feature.ref_comp_id NH2 _pdbx_modification_feature.type None _pdbx_modification_feature.category 'Terminal amidation' # _struct_sheet.id AA1 _struct_sheet.type ? _struct_sheet.number_strands 2 _struct_sheet.details ? # _struct_sheet_order.sheet_id AA1 _struct_sheet_order.range_id_1 1 _struct_sheet_order.range_id_2 2 _struct_sheet_order.offset ? _struct_sheet_order.sense anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 PRO A 11 ? CYS A 15 ? PRO A 108 CYS A 112 AA1 2 TYR A 41 ? THR A 45 ? TYR A 138 THR A 142 # _pdbx_struct_sheet_hbond.sheet_id AA1 _pdbx_struct_sheet_hbond.range_id_1 1 _pdbx_struct_sheet_hbond.range_id_2 2 _pdbx_struct_sheet_hbond.range_1_label_atom_id N _pdbx_struct_sheet_hbond.range_1_label_comp_id SER _pdbx_struct_sheet_hbond.range_1_label_asym_id A _pdbx_struct_sheet_hbond.range_1_label_seq_id 14 _pdbx_struct_sheet_hbond.range_1_PDB_ins_code ? _pdbx_struct_sheet_hbond.range_1_auth_atom_id N _pdbx_struct_sheet_hbond.range_1_auth_comp_id SER _pdbx_struct_sheet_hbond.range_1_auth_asym_id A _pdbx_struct_sheet_hbond.range_1_auth_seq_id 111 _pdbx_struct_sheet_hbond.range_2_label_atom_id O _pdbx_struct_sheet_hbond.range_2_label_comp_id ARG _pdbx_struct_sheet_hbond.range_2_label_asym_id A _pdbx_struct_sheet_hbond.range_2_label_seq_id 42 _pdbx_struct_sheet_hbond.range_2_PDB_ins_code ? _pdbx_struct_sheet_hbond.range_2_auth_atom_id O _pdbx_struct_sheet_hbond.range_2_auth_comp_id ARG _pdbx_struct_sheet_hbond.range_2_auth_asym_id A _pdbx_struct_sheet_hbond.range_2_auth_seq_id 139 # _pdbx_entry_details.entry_id 9DNR _pdbx_entry_details.has_ligand_of_interest Y _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_protein_modification Y # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O A HOH 387 ? ? O A HOH 395 ? ? 2.16 2 1 O A HOH 358 ? ? O A HOH 382 ? ? 2.16 3 1 OE1 A GLN 164 ? ? O A HOH 301 ? ? 2.19 # _pdbx_validate_symm_contact.id 1 _pdbx_validate_symm_contact.PDB_model_num 1 _pdbx_validate_symm_contact.auth_atom_id_1 O _pdbx_validate_symm_contact.auth_asym_id_1 A _pdbx_validate_symm_contact.auth_comp_id_1 HOH _pdbx_validate_symm_contact.auth_seq_id_1 373 _pdbx_validate_symm_contact.PDB_ins_code_1 ? _pdbx_validate_symm_contact.label_alt_id_1 ? _pdbx_validate_symm_contact.site_symmetry_1 1_555 _pdbx_validate_symm_contact.auth_atom_id_2 O _pdbx_validate_symm_contact.auth_asym_id_2 A _pdbx_validate_symm_contact.auth_comp_id_2 HOH _pdbx_validate_symm_contact.auth_seq_id_2 382 _pdbx_validate_symm_contact.PDB_ins_code_2 ? _pdbx_validate_symm_contact.label_alt_id_2 ? _pdbx_validate_symm_contact.site_symmetry_2 2_555 _pdbx_validate_symm_contact.dist 2.11 # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id TRP _pdbx_validate_torsion.auth_asym_id C _pdbx_validate_torsion.auth_seq_id 2 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi 137.80 _pdbx_validate_torsion.psi -112.12 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASP N N N N 41 ASP CA C N S 42 ASP C C N N 43 ASP O O N N 44 ASP CB C N N 45 ASP CG C N N 46 ASP OD1 O N N 47 ASP OD2 O N N 48 ASP OXT O N N 49 ASP H H N N 50 ASP H2 H N N 51 ASP HA H N N 52 ASP HB2 H N N 53 ASP HB3 H N N 54 ASP HD2 H N N 55 ASP HXT H N N 56 CYS N N N N 57 CYS CA C N R 58 CYS C C N N 59 CYS O O N N 60 CYS CB C N N 61 CYS SG S N N 62 CYS OXT O N N 63 CYS H H N N 64 CYS H2 H N N 65 CYS HA H N N 66 CYS HB2 H N N 67 CYS HB3 H N N 68 CYS HG H N N 69 CYS HXT H N N 70 GLN N N N N 71 GLN CA C N S 72 GLN C C N N 73 GLN O O N N 74 GLN CB C N N 75 GLN CG C N N 76 GLN CD C N N 77 GLN OE1 O N N 78 GLN NE2 N N N 79 GLN OXT O N N 80 GLN H H N N 81 GLN H2 H N N 82 GLN HA H N N 83 GLN HB2 H N N 84 GLN HB3 H N N 85 GLN HG2 H N N 86 GLN HG3 H N N 87 GLN HE21 H N N 88 GLN HE22 H N N 89 GLN HXT H N N 90 GLU N N N N 91 GLU CA C N S 92 GLU C C N N 93 GLU O O N N 94 GLU CB C N N 95 GLU CG C N N 96 GLU CD C N N 97 GLU OE1 O N N 98 GLU OE2 O N N 99 GLU OXT O N N 100 GLU H H N N 101 GLU H2 H N N 102 GLU HA H N N 103 GLU HB2 H N N 104 GLU HB3 H N N 105 GLU HG2 H N N 106 GLU HG3 H N N 107 GLU HE2 H N N 108 GLU HXT H N N 109 GLY N N N N 110 GLY CA C N N 111 GLY C C N N 112 GLY O O N N 113 GLY OXT O N N 114 GLY H H N N 115 GLY H2 H N N 116 GLY HA2 H N N 117 GLY HA3 H N N 118 GLY HXT H N N 119 HIS N N N N 120 HIS CA C N S 121 HIS C C N N 122 HIS O O N N 123 HIS CB C N N 124 HIS CG C Y N 125 HIS ND1 N Y N 126 HIS CD2 C Y N 127 HIS CE1 C Y N 128 HIS NE2 N Y N 129 HIS OXT O N N 130 HIS H H N N 131 HIS H2 H N N 132 HIS HA H N N 133 HIS HB2 H N N 134 HIS HB3 H N N 135 HIS HD1 H N N 136 HIS HD2 H N N 137 HIS HE1 H N N 138 HIS HE2 H N N 139 HIS HXT H N N 140 HOH O O N N 141 HOH H1 H N N 142 HOH H2 H N N 143 ILE N N N N 144 ILE CA C N S 145 ILE C C N N 146 ILE O O N N 147 ILE CB C N S 148 ILE CG1 C N N 149 ILE CG2 C N N 150 ILE CD1 C N N 151 ILE OXT O N N 152 ILE H H N N 153 ILE H2 H N N 154 ILE HA H N N 155 ILE HB H N N 156 ILE HG12 H N N 157 ILE HG13 H N N 158 ILE HG21 H N N 159 ILE HG22 H N N 160 ILE HG23 H N N 161 ILE HD11 H N N 162 ILE HD12 H N N 163 ILE HD13 H N N 164 ILE HXT H N N 165 LEU N N N N 166 LEU CA C N S 167 LEU C C N N 168 LEU O O N N 169 LEU CB C N N 170 LEU CG C N N 171 LEU CD1 C N N 172 LEU CD2 C N N 173 LEU OXT O N N 174 LEU H H N N 175 LEU H2 H N N 176 LEU HA H N N 177 LEU HB2 H N N 178 LEU HB3 H N N 179 LEU HG H N N 180 LEU HD11 H N N 181 LEU HD12 H N N 182 LEU HD13 H N N 183 LEU HD21 H N N 184 LEU HD22 H N N 185 LEU HD23 H N N 186 LEU HXT H N N 187 LYS N N N N 188 LYS CA C N S 189 LYS C C N N 190 LYS O O N N 191 LYS CB C N N 192 LYS CG C N N 193 LYS CD C N N 194 LYS CE C N N 195 LYS NZ N N N 196 LYS OXT O N N 197 LYS H H N N 198 LYS H2 H N N 199 LYS HA H N N 200 LYS HB2 H N N 201 LYS HB3 H N N 202 LYS HG2 H N N 203 LYS HG3 H N N 204 LYS HD2 H N N 205 LYS HD3 H N N 206 LYS HE2 H N N 207 LYS HE3 H N N 208 LYS HZ1 H N N 209 LYS HZ2 H N N 210 LYS HZ3 H N N 211 LYS HXT H N N 212 MET N N N N 213 MET CA C N S 214 MET C C N N 215 MET O O N N 216 MET CB C N N 217 MET CG C N N 218 MET SD S N N 219 MET CE C N N 220 MET OXT O N N 221 MET H H N N 222 MET H2 H N N 223 MET HA H N N 224 MET HB2 H N N 225 MET HB3 H N N 226 MET HG2 H N N 227 MET HG3 H N N 228 MET HE1 H N N 229 MET HE2 H N N 230 MET HE3 H N N 231 MET HXT H N N 232 NH2 N N N N 233 NH2 HN1 H N N 234 NH2 HN2 H N N 235 PHE N N N N 236 PHE CA C N S 237 PHE C C N N 238 PHE O O N N 239 PHE CB C N N 240 PHE CG C Y N 241 PHE CD1 C Y N 242 PHE CD2 C Y N 243 PHE CE1 C Y N 244 PHE CE2 C Y N 245 PHE CZ C Y N 246 PHE OXT O N N 247 PHE H H N N 248 PHE H2 H N N 249 PHE HA H N N 250 PHE HB2 H N N 251 PHE HB3 H N N 252 PHE HD1 H N N 253 PHE HD2 H N N 254 PHE HE1 H N N 255 PHE HE2 H N N 256 PHE HZ H N N 257 PHE HXT H N N 258 PRO N N N N 259 PRO CA C N S 260 PRO C C N N 261 PRO O O N N 262 PRO CB C N N 263 PRO CG C N N 264 PRO CD C N N 265 PRO OXT O N N 266 PRO H H N N 267 PRO HA H N N 268 PRO HB2 H N N 269 PRO HB3 H N N 270 PRO HG2 H N N 271 PRO HG3 H N N 272 PRO HD2 H N N 273 PRO HD3 H N N 274 PRO HXT H N N 275 SER N N N N 276 SER CA C N S 277 SER C C N N 278 SER O O N N 279 SER CB C N N 280 SER OG O N N 281 SER OXT O N N 282 SER H H N N 283 SER H2 H N N 284 SER HA H N N 285 SER HB2 H N N 286 SER HB3 H N N 287 SER HG H N N 288 SER HXT H N N 289 THR N N N N 290 THR CA C N S 291 THR C C N N 292 THR O O N N 293 THR CB C N R 294 THR OG1 O N N 295 THR CG2 C N N 296 THR OXT O N N 297 THR H H N N 298 THR H2 H N N 299 THR HA H N N 300 THR HB H N N 301 THR HG1 H N N 302 THR HG21 H N N 303 THR HG22 H N N 304 THR HG23 H N N 305 THR HXT H N N 306 TRP N N N N 307 TRP CA C N S 308 TRP C C N N 309 TRP O O N N 310 TRP CB C N N 311 TRP CG C Y N 312 TRP CD1 C Y N 313 TRP CD2 C Y N 314 TRP NE1 N Y N 315 TRP CE2 C Y N 316 TRP CE3 C Y N 317 TRP CZ2 C Y N 318 TRP CZ3 C Y N 319 TRP CH2 C Y N 320 TRP OXT O N N 321 TRP H H N N 322 TRP H2 H N N 323 TRP HA H N N 324 TRP HB2 H N N 325 TRP HB3 H N N 326 TRP HD1 H N N 327 TRP HE1 H N N 328 TRP HE3 H N N 329 TRP HZ2 H N N 330 TRP HZ3 H N N 331 TRP HH2 H N N 332 TRP HXT H N N 333 TYR N N N N 334 TYR CA C N S 335 TYR C C N N 336 TYR O O N N 337 TYR CB C N N 338 TYR CG C Y N 339 TYR CD1 C Y N 340 TYR CD2 C Y N 341 TYR CE1 C Y N 342 TYR CE2 C Y N 343 TYR CZ C Y N 344 TYR OH O N N 345 TYR OXT O N N 346 TYR H H N N 347 TYR H2 H N N 348 TYR HA H N N 349 TYR HB2 H N N 350 TYR HB3 H N N 351 TYR HD1 H N N 352 TYR HD2 H N N 353 TYR HE1 H N N 354 TYR HE2 H N N 355 TYR HH H N N 356 TYR HXT H N N 357 VAL N N N N 358 VAL CA C N S 359 VAL C C N N 360 VAL O O N N 361 VAL CB C N N 362 VAL CG1 C N N 363 VAL CG2 C N N 364 VAL OXT O N N 365 VAL H H N N 366 VAL H2 H N N 367 VAL HA H N N 368 VAL HB H N N 369 VAL HG11 H N N 370 VAL HG12 H N N 371 VAL HG13 H N N 372 VAL HG21 H N N 373 VAL HG22 H N N 374 VAL HG23 H N N 375 VAL HXT H N N 376 ZN ZN ZN N N 377 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASP N CA sing N N 39 ASP N H sing N N 40 ASP N H2 sing N N 41 ASP CA C sing N N 42 ASP CA CB sing N N 43 ASP CA HA sing N N 44 ASP C O doub N N 45 ASP C OXT sing N N 46 ASP CB CG sing N N 47 ASP CB HB2 sing N N 48 ASP CB HB3 sing N N 49 ASP CG OD1 doub N N 50 ASP CG OD2 sing N N 51 ASP OD2 HD2 sing N N 52 ASP OXT HXT sing N N 53 CYS N CA sing N N 54 CYS N H sing N N 55 CYS N H2 sing N N 56 CYS CA C sing N N 57 CYS CA CB sing N N 58 CYS CA HA sing N N 59 CYS C O doub N N 60 CYS C OXT sing N N 61 CYS CB SG sing N N 62 CYS CB HB2 sing N N 63 CYS CB HB3 sing N N 64 CYS SG HG sing N N 65 CYS OXT HXT sing N N 66 GLN N CA sing N N 67 GLN N H sing N N 68 GLN N H2 sing N N 69 GLN CA C sing N N 70 GLN CA CB sing N N 71 GLN CA HA sing N N 72 GLN C O doub N N 73 GLN C OXT sing N N 74 GLN CB CG sing N N 75 GLN CB HB2 sing N N 76 GLN CB HB3 sing N N 77 GLN CG CD sing N N 78 GLN CG HG2 sing N N 79 GLN CG HG3 sing N N 80 GLN CD OE1 doub N N 81 GLN CD NE2 sing N N 82 GLN NE2 HE21 sing N N 83 GLN NE2 HE22 sing N N 84 GLN OXT HXT sing N N 85 GLU N CA sing N N 86 GLU N H sing N N 87 GLU N H2 sing N N 88 GLU CA C sing N N 89 GLU CA CB sing N N 90 GLU CA HA sing N N 91 GLU C O doub N N 92 GLU C OXT sing N N 93 GLU CB CG sing N N 94 GLU CB HB2 sing N N 95 GLU CB HB3 sing N N 96 GLU CG CD sing N N 97 GLU CG HG2 sing N N 98 GLU CG HG3 sing N N 99 GLU CD OE1 doub N N 100 GLU CD OE2 sing N N 101 GLU OE2 HE2 sing N N 102 GLU OXT HXT sing N N 103 GLY N CA sing N N 104 GLY N H sing N N 105 GLY N H2 sing N N 106 GLY CA C sing N N 107 GLY CA HA2 sing N N 108 GLY CA HA3 sing N N 109 GLY C O doub N N 110 GLY C OXT sing N N 111 GLY OXT HXT sing N N 112 HIS N CA sing N N 113 HIS N H sing N N 114 HIS N H2 sing N N 115 HIS CA C sing N N 116 HIS CA CB sing N N 117 HIS CA HA sing N N 118 HIS C O doub N N 119 HIS C OXT sing N N 120 HIS CB CG sing N N 121 HIS CB HB2 sing N N 122 HIS CB HB3 sing N N 123 HIS CG ND1 sing Y N 124 HIS CG CD2 doub Y N 125 HIS ND1 CE1 doub Y N 126 HIS ND1 HD1 sing N N 127 HIS CD2 NE2 sing Y N 128 HIS CD2 HD2 sing N N 129 HIS CE1 NE2 sing Y N 130 HIS CE1 HE1 sing N N 131 HIS NE2 HE2 sing N N 132 HIS OXT HXT sing N N 133 HOH O H1 sing N N 134 HOH O H2 sing N N 135 ILE N CA sing N N 136 ILE N H sing N N 137 ILE N H2 sing N N 138 ILE CA C sing N N 139 ILE CA CB sing N N 140 ILE CA HA sing N N 141 ILE C O doub N N 142 ILE C OXT sing N N 143 ILE CB CG1 sing N N 144 ILE CB CG2 sing N N 145 ILE CB HB sing N N 146 ILE CG1 CD1 sing N N 147 ILE CG1 HG12 sing N N 148 ILE CG1 HG13 sing N N 149 ILE CG2 HG21 sing N N 150 ILE CG2 HG22 sing N N 151 ILE CG2 HG23 sing N N 152 ILE CD1 HD11 sing N N 153 ILE CD1 HD12 sing N N 154 ILE CD1 HD13 sing N N 155 ILE OXT HXT sing N N 156 LEU N CA sing N N 157 LEU N H sing N N 158 LEU N H2 sing N N 159 LEU CA C sing N N 160 LEU CA CB sing N N 161 LEU CA HA sing N N 162 LEU C O doub N N 163 LEU C OXT sing N N 164 LEU CB CG sing N N 165 LEU CB HB2 sing N N 166 LEU CB HB3 sing N N 167 LEU CG CD1 sing N N 168 LEU CG CD2 sing N N 169 LEU CG HG sing N N 170 LEU CD1 HD11 sing N N 171 LEU CD1 HD12 sing N N 172 LEU CD1 HD13 sing N N 173 LEU CD2 HD21 sing N N 174 LEU CD2 HD22 sing N N 175 LEU CD2 HD23 sing N N 176 LEU OXT HXT sing N N 177 LYS N CA sing N N 178 LYS N H sing N N 179 LYS N H2 sing N N 180 LYS CA C sing N N 181 LYS CA CB sing N N 182 LYS CA HA sing N N 183 LYS C O doub N N 184 LYS C OXT sing N N 185 LYS CB CG sing N N 186 LYS CB HB2 sing N N 187 LYS CB HB3 sing N N 188 LYS CG CD sing N N 189 LYS CG HG2 sing N N 190 LYS CG HG3 sing N N 191 LYS CD CE sing N N 192 LYS CD HD2 sing N N 193 LYS CD HD3 sing N N 194 LYS CE NZ sing N N 195 LYS CE HE2 sing N N 196 LYS CE HE3 sing N N 197 LYS NZ HZ1 sing N N 198 LYS NZ HZ2 sing N N 199 LYS NZ HZ3 sing N N 200 LYS OXT HXT sing N N 201 MET N CA sing N N 202 MET N H sing N N 203 MET N H2 sing N N 204 MET CA C sing N N 205 MET CA CB sing N N 206 MET CA HA sing N N 207 MET C O doub N N 208 MET C OXT sing N N 209 MET CB CG sing N N 210 MET CB HB2 sing N N 211 MET CB HB3 sing N N 212 MET CG SD sing N N 213 MET CG HG2 sing N N 214 MET CG HG3 sing N N 215 MET SD CE sing N N 216 MET CE HE1 sing N N 217 MET CE HE2 sing N N 218 MET CE HE3 sing N N 219 MET OXT HXT sing N N 220 NH2 N HN1 sing N N 221 NH2 N HN2 sing N N 222 PHE N CA sing N N 223 PHE N H sing N N 224 PHE N H2 sing N N 225 PHE CA C sing N N 226 PHE CA CB sing N N 227 PHE CA HA sing N N 228 PHE C O doub N N 229 PHE C OXT sing N N 230 PHE CB CG sing N N 231 PHE CB HB2 sing N N 232 PHE CB HB3 sing N N 233 PHE CG CD1 doub Y N 234 PHE CG CD2 sing Y N 235 PHE CD1 CE1 sing Y N 236 PHE CD1 HD1 sing N N 237 PHE CD2 CE2 doub Y N 238 PHE CD2 HD2 sing N N 239 PHE CE1 CZ doub Y N 240 PHE CE1 HE1 sing N N 241 PHE CE2 CZ sing Y N 242 PHE CE2 HE2 sing N N 243 PHE CZ HZ sing N N 244 PHE OXT HXT sing N N 245 PRO N CA sing N N 246 PRO N CD sing N N 247 PRO N H sing N N 248 PRO CA C sing N N 249 PRO CA CB sing N N 250 PRO CA HA sing N N 251 PRO C O doub N N 252 PRO C OXT sing N N 253 PRO CB CG sing N N 254 PRO CB HB2 sing N N 255 PRO CB HB3 sing N N 256 PRO CG CD sing N N 257 PRO CG HG2 sing N N 258 PRO CG HG3 sing N N 259 PRO CD HD2 sing N N 260 PRO CD HD3 sing N N 261 PRO OXT HXT sing N N 262 SER N CA sing N N 263 SER N H sing N N 264 SER N H2 sing N N 265 SER CA C sing N N 266 SER CA CB sing N N 267 SER CA HA sing N N 268 SER C O doub N N 269 SER C OXT sing N N 270 SER CB OG sing N N 271 SER CB HB2 sing N N 272 SER CB HB3 sing N N 273 SER OG HG sing N N 274 SER OXT HXT sing N N 275 THR N CA sing N N 276 THR N H sing N N 277 THR N H2 sing N N 278 THR CA C sing N N 279 THR CA CB sing N N 280 THR CA HA sing N N 281 THR C O doub N N 282 THR C OXT sing N N 283 THR CB OG1 sing N N 284 THR CB CG2 sing N N 285 THR CB HB sing N N 286 THR OG1 HG1 sing N N 287 THR CG2 HG21 sing N N 288 THR CG2 HG22 sing N N 289 THR CG2 HG23 sing N N 290 THR OXT HXT sing N N 291 TRP N CA sing N N 292 TRP N H sing N N 293 TRP N H2 sing N N 294 TRP CA C sing N N 295 TRP CA CB sing N N 296 TRP CA HA sing N N 297 TRP C O doub N N 298 TRP C OXT sing N N 299 TRP CB CG sing N N 300 TRP CB HB2 sing N N 301 TRP CB HB3 sing N N 302 TRP CG CD1 doub Y N 303 TRP CG CD2 sing Y N 304 TRP CD1 NE1 sing Y N 305 TRP CD1 HD1 sing N N 306 TRP CD2 CE2 doub Y N 307 TRP CD2 CE3 sing Y N 308 TRP NE1 CE2 sing Y N 309 TRP NE1 HE1 sing N N 310 TRP CE2 CZ2 sing Y N 311 TRP CE3 CZ3 doub Y N 312 TRP CE3 HE3 sing N N 313 TRP CZ2 CH2 doub Y N 314 TRP CZ2 HZ2 sing N N 315 TRP CZ3 CH2 sing Y N 316 TRP CZ3 HZ3 sing N N 317 TRP CH2 HH2 sing N N 318 TRP OXT HXT sing N N 319 TYR N CA sing N N 320 TYR N H sing N N 321 TYR N H2 sing N N 322 TYR CA C sing N N 323 TYR CA CB sing N N 324 TYR CA HA sing N N 325 TYR C O doub N N 326 TYR C OXT sing N N 327 TYR CB CG sing N N 328 TYR CB HB2 sing N N 329 TYR CB HB3 sing N N 330 TYR CG CD1 doub Y N 331 TYR CG CD2 sing Y N 332 TYR CD1 CE1 sing Y N 333 TYR CD1 HD1 sing N N 334 TYR CD2 CE2 doub Y N 335 TYR CD2 HD2 sing N N 336 TYR CE1 CZ doub Y N 337 TYR CE1 HE1 sing N N 338 TYR CE2 CZ sing Y N 339 TYR CE2 HE2 sing N N 340 TYR CZ OH sing N N 341 TYR OH HH sing N N 342 TYR OXT HXT sing N N 343 VAL N CA sing N N 344 VAL N H sing N N 345 VAL N H2 sing N N 346 VAL CA C sing N N 347 VAL CA CB sing N N 348 VAL CA HA sing N N 349 VAL C O doub N N 350 VAL C OXT sing N N 351 VAL CB CG1 sing N N 352 VAL CB CG2 sing N N 353 VAL CB HB sing N N 354 VAL CG1 HG11 sing N N 355 VAL CG1 HG12 sing N N 356 VAL CG1 HG13 sing N N 357 VAL CG2 HG21 sing N N 358 VAL CG2 HG22 sing N N 359 VAL CG2 HG23 sing N N 360 VAL OXT HXT sing N N 361 # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'Department of Defense (DOD, United States)' 'United States' HT9425-23-1-0560 1 'Department of Defense (DOD, United States)' 'United States' PA220024P1 2 'National Institutes of Health/National Cancer Institute (NIH/NCI)' 'United States' 'R01 CA212119' 3 'National Institutes of Health/National Cancer Institute (NIH/NCI)' 'United States' 'R01 CA265410' 4 # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 3ny2 _pdbx_initial_refinement_model.details ? # _atom_sites.entry_id 9DNR _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.Cartn_transform_axes ? _atom_sites.fract_transf_matrix[1][1] 0.034206 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.012153 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.027058 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.035835 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C N O S ZN # loop_ #