HEADER LIGASE 25-SEP-24 9DRJ TITLE CRYO-EM STRUCTURE OF A SUMO E1-E2-SUMO1 COMPLEX. COMPND MOL_ID: 1; COMPND 2 MOLECULE: SUMO-ACTIVATING ENZYME SUBUNIT 1; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: UBIQUITIN-LIKE 1-ACTIVATING ENZYME E1A; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: SUMO-ACTIVATING ENZYME SUBUNIT 2; COMPND 8 CHAIN: B; COMPND 9 SYNONYM: ANTHRACYCLINE-ASSOCIATED RESISTANCE ARX,UBIQUITIN-LIKE 1- COMPND 10 ACTIVATING ENZYME E1B,UBIQUITIN-LIKE MODIFIER-ACTIVATING ENZYME 2; COMPND 11 EC: 2.3.2.-; COMPND 12 ENGINEERED: YES; COMPND 13 MOL_ID: 3; COMPND 14 MOLECULE: SUMO-CONJUGATING ENZYME UBC9; COMPND 15 CHAIN: C; COMPND 16 SYNONYM: RING-TYPE E3 SUMO TRANSFERASE UBC9,SUMO-PROTEIN LIGASE, COMPND 17 UBIQUITIN CARRIER PROTEIN 9,UBIQUITIN CARRIER PROTEIN I,UBIQUITIN- COMPND 18 CONJUGATING ENZYME E2 I,UBIQUITIN-PROTEIN LIGASE I,P18; COMPND 19 EC: 2.3.2.-; COMPND 20 ENGINEERED: YES; COMPND 21 MUTATION: YES; COMPND 22 MOL_ID: 4; COMPND 23 MOLECULE: SMALL UBIQUITIN-RELATED MODIFIER 1; COMPND 24 CHAIN: D; COMPND 25 SYNONYM: SUMO-1,GAP-MODIFYING PROTEIN 1,GMP1,SMT3 HOMOLOG 3,SENTRIN, COMPND 26 UBIQUITIN-HOMOLOGY DOMAIN PROTEIN PIC1,UBIQUITIN-LIKE PROTEIN SMT3C, COMPND 27 SMT3C,UBIQUITIN-LIKE PROTEIN UBL1; COMPND 28 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: SAE1, AOS1, SUA1, UBLE1A; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 10 ORGANISM_COMMON: HUMAN; SOURCE 11 ORGANISM_TAXID: 9606; SOURCE 12 GENE: UBA2, SAE2, UBLE1B, HRIHFB2115; SOURCE 13 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 14 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 15 MOL_ID: 3; SOURCE 16 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 17 ORGANISM_COMMON: HUMAN; SOURCE 18 ORGANISM_TAXID: 9606; SOURCE 19 GENE: UBE2I, UBC9, UBCE9; SOURCE 20 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 21 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 22 MOL_ID: 4; SOURCE 23 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 24 ORGANISM_COMMON: HUMAN; SOURCE 25 ORGANISM_TAXID: 9606; SOURCE 26 GENE: SUMO1, SMT3C, SMT3H3, UBL1, OK/SW-CL.43; SOURCE 27 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 28 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS SUMO1, SAE1, UBC9, UBA2, LIGASE EXPDTA ELECTRON MICROSCOPY AUTHOR L.JIA,D.NAYAK,E.A.RUBEN,A.NAYAK,E.V.WASMUTH,S.K.OLSEN REVDAT 3 24-DEC-25 9DRJ 1 JRNL REVDAT 2 12-NOV-25 9DRJ 1 JRNL REVDAT 1 01-OCT-25 9DRJ 0 JRNL AUTH A.NAYAK,D.NAYAK,L.JIA,E.A.RUBEN,S.VISWANADHAPALLI, JRNL AUTH 2 P.DOS SANTOS BURY,K.M.NASSAR,C.H.YU,A.A.TUMANOVA, JRNL AUTH 3 C.M.STRATTON,P.EBADI,D.N.IVANOV,P.SUNG,R.K.VADLAMUDI, JRNL AUTH 4 E.V.WASMUTH,S.K.OLSEN JRNL TITL CRYO-EM STRUCTURES REVEAL THE MOLECULAR MECHANISM OF SUMO JRNL TITL 2 E1-E2 THIOESTER TRANSFER. JRNL REF NAT.STRUCT.MOL.BIOL. V. 32 2441 2025 JRNL REFN ESSN 1545-9985 JRNL PMID 40999065 JRNL DOI 10.1038/S41594-025-01681-8 REMARK 2 REMARK 2 RESOLUTION. 2.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 SOFTWARE PACKAGES : NULL REMARK 3 RECONSTRUCTION SCHEMA : NULL REMARK 3 REMARK 3 EM MAP-MODEL FITTING AND REFINEMENT REMARK 3 PDB ENTRY : NULL REMARK 3 REFINEMENT SPACE : NULL REMARK 3 REFINEMENT PROTOCOL : NULL REMARK 3 REFINEMENT TARGET : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE : NULL REMARK 3 REMARK 3 FITTING PROCEDURE : NULL REMARK 3 REMARK 3 EM IMAGE RECONSTRUCTION STATISTICS REMARK 3 NOMINAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 ACTUAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 EFFECTIVE RESOLUTION (ANGSTROMS) : 2.700 REMARK 3 NUMBER OF PARTICLES : 201452 REMARK 3 CTF CORRECTION METHOD : PHASE FLIPPING AND AMPLITUDE REMARK 3 CORRECTION REMARK 3 REMARK 3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: NULL REMARK 3 REMARK 3 OTHER DETAILS: NULL REMARK 4 REMARK 4 9DRJ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 26-SEP-24. REMARK 100 THE DEPOSITION ID IS D_1000288670. REMARK 245 REMARK 245 EXPERIMENTAL DETAILS REMARK 245 RECONSTRUCTION METHOD : SINGLE PARTICLE REMARK 245 SPECIMEN TYPE : NULL REMARK 245 REMARK 245 ELECTRON MICROSCOPE SAMPLE REMARK 245 SAMPLE TYPE : PARTICLE REMARK 245 PARTICLE TYPE : POINT REMARK 245 NAME OF SAMPLE : SUMO E1-E2-SUMO1 COMPLEX REMARK 245 SAMPLE CONCENTRATION (MG ML-1) : NULL REMARK 245 SAMPLE SUPPORT DETAILS : NULL REMARK 245 SAMPLE VITRIFICATION DETAILS : NULL REMARK 245 SAMPLE BUFFER : NULL REMARK 245 PH : 7.50 REMARK 245 SAMPLE DETAILS : NULL REMARK 245 REMARK 245 DATA ACQUISITION REMARK 245 DATE OF EXPERIMENT : NULL REMARK 245 NUMBER OF MICROGRAPHS-IMAGES : NULL REMARK 245 TEMPERATURE (KELVIN) : NULL REMARK 245 MICROSCOPE MODEL : FEI TITAN KRIOS REMARK 245 DETECTOR TYPE : GATAN K3 (6K X 4K) REMARK 245 MINIMUM DEFOCUS (NM) : 1000.00 REMARK 245 MAXIMUM DEFOCUS (NM) : 2500.00 REMARK 245 MINIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 MAXIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 NOMINAL CS : NULL REMARK 245 IMAGING MODE : BRIGHT FIELD REMARK 245 ELECTRON DOSE (ELECTRONS NM**-2) : 5200.00 REMARK 245 ILLUMINATION MODE : FLOOD BEAM REMARK 245 NOMINAL MAGNIFICATION : NULL REMARK 245 CALIBRATED MAGNIFICATION : NULL REMARK 245 SOURCE : FIELD EMISSION GUN REMARK 245 ACCELERATION VOLTAGE (KV) : 300 REMARK 245 IMAGING DETAILS : NULL REMARK 247 REMARK 247 ELECTRON MICROSCOPY REMARK 247 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON REMARK 247 MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE REMARK 247 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES REMARK 247 ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION REMARK 247 OF THE STRUCTURE FACTORS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 VAL A 2 REMARK 465 GLU A 3 REMARK 465 LYS A 4 REMARK 465 GLU A 5 REMARK 465 GLU A 6 REMARK 465 ALA A 7 REMARK 465 GLY A 8 REMARK 465 VAL A 181 REMARK 465 ALA A 182 REMARK 465 LYS A 183 REMARK 465 VAL A 184 REMARK 465 SER A 185 REMARK 465 GLN A 186 REMARK 465 GLY A 187 REMARK 465 VAL A 188 REMARK 465 GLU A 189 REMARK 465 ASP A 190 REMARK 465 GLY A 191 REMARK 465 PRO A 192 REMARK 465 ASP A 193 REMARK 465 THR A 194 REMARK 465 LYS A 195 REMARK 465 ARG A 196 REMARK 465 ALA A 197 REMARK 465 LYS A 198 REMARK 465 LEU A 199 REMARK 465 ASP A 200 REMARK 465 SER A 201 REMARK 465 SER A 202 REMARK 465 GLU A 203 REMARK 465 THR A 204 REMARK 465 LYS A 346 REMARK 465 MET B 1 REMARK 465 ALA B 2 REMARK 465 LEU B 3 REMARK 465 SER B 4 REMARK 465 GLU B 292 REMARK 465 GLU B 293 REMARK 465 THR B 294 REMARK 465 ASN B 295 REMARK 465 ALA B 296 REMARK 465 SER B 297 REMARK 465 ASP B 298 REMARK 465 GLN B 299 REMARK 465 GLN B 300 REMARK 465 ASN B 301 REMARK 465 GLU B 302 REMARK 465 PRO B 303 REMARK 465 GLN B 304 REMARK 465 MET C -19 REMARK 465 GLY C -18 REMARK 465 SER C -17 REMARK 465 SER C -16 REMARK 465 HIS C -15 REMARK 465 HIS C -14 REMARK 465 HIS C -13 REMARK 465 HIS C -12 REMARK 465 HIS C -11 REMARK 465 HIS C -10 REMARK 465 SER C -9 REMARK 465 SER C -8 REMARK 465 GLY C -7 REMARK 465 LEU C -6 REMARK 465 VAL C -5 REMARK 465 PRO C -4 REMARK 465 ARG C -3 REMARK 465 GLY C -2 REMARK 465 SER C 158 REMARK 465 MET D -19 REMARK 465 GLY D -18 REMARK 465 SER D -17 REMARK 465 SER D -16 REMARK 465 HIS D -15 REMARK 465 HIS D -14 REMARK 465 HIS D -13 REMARK 465 HIS D -12 REMARK 465 HIS D -11 REMARK 465 HIS D -10 REMARK 465 SER D -9 REMARK 465 SER D -8 REMARK 465 GLY D -7 REMARK 465 LEU D -6 REMARK 465 VAL D -5 REMARK 465 PRO D -4 REMARK 465 ARG D -3 REMARK 465 GLY D -2 REMARK 465 SER D -1 REMARK 465 HIS D 0 REMARK 465 MET D 1 REMARK 465 SER D 2 REMARK 465 ASP D 3 REMARK 465 GLN D 4 REMARK 465 GLU D 5 REMARK 465 ALA D 6 REMARK 465 LYS D 7 REMARK 465 PRO D 8 REMARK 465 SER D 9 REMARK 465 THR D 10 REMARK 465 GLU D 11 REMARK 465 ASP D 12 REMARK 465 LEU D 13 REMARK 465 GLY D 14 REMARK 465 ASP D 15 REMARK 465 LYS D 16 REMARK 465 LYS D 17 REMARK 465 GLU D 18 REMARK 465 GLY D 19 REMARK 465 GLU D 20 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 178 CG CD CE NZ REMARK 470 THR A 179 OG1 CG2 REMARK 470 LYS A 180 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 C GLY D 97 O3P AMP D 601 1.51 REMARK 500 O GLY D 97 O3P AMP D 601 1.78 REMARK 500 OH TYR B 265 O GLN C 130 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE A 80 -11.89 72.70 REMARK 500 SER A 86 32.71 -97.29 REMARK 500 SER A 297 172.90 69.53 REMARK 500 ASP A 322 144.62 73.29 REMARK 500 TYR B 84 86.56 -157.41 REMARK 500 ASP B 201 114.86 -160.32 REMARK 500 ARG B 210 -167.86 -167.04 REMARK 500 GLU B 218 57.89 36.16 REMARK 500 ASP B 338 25.12 48.39 REMARK 500 TYR B 442 -1.91 70.04 REMARK 500 LYS C 101 -65.14 -95.32 REMARK 500 ALA C 131 -4.40 69.09 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 601 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 158 SG REMARK 620 2 CYS B 161 SG 110.8 REMARK 620 3 CYS B 441 SG 105.3 110.4 REMARK 620 4 CYS B 444 SG 112.2 108.1 110.0 REMARK 620 N 1 2 3 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EMD-47127 RELATED DB: EMDB REMARK 900 CRYO-EM STRUCTURE OF A SUMO E1-E2-SUMO1 COMPLEX. DBREF 9DRJ A 1 346 UNP Q9UBE0 SAE1_HUMAN 1 346 DBREF 9DRJ B 1 548 UNP Q9UBT2 SAE2_HUMAN 1 548 DBREF 9DRJ C 1 158 UNP P63279 UBC9_HUMAN 1 158 DBREF 9DRJ D 1 97 UNP P63165 SUMO1_HUMAN 1 97 SEQADV 9DRJ MET C -19 UNP P63279 INITIATING METHIONINE SEQADV 9DRJ GLY C -18 UNP P63279 EXPRESSION TAG SEQADV 9DRJ SER C -17 UNP P63279 EXPRESSION TAG SEQADV 9DRJ SER C -16 UNP P63279 EXPRESSION TAG SEQADV 9DRJ HIS C -15 UNP P63279 EXPRESSION TAG SEQADV 9DRJ HIS C -14 UNP P63279 EXPRESSION TAG SEQADV 9DRJ HIS C -13 UNP P63279 EXPRESSION TAG SEQADV 9DRJ HIS C -12 UNP P63279 EXPRESSION TAG SEQADV 9DRJ HIS C -11 UNP P63279 EXPRESSION TAG SEQADV 9DRJ HIS C -10 UNP P63279 EXPRESSION TAG SEQADV 9DRJ SER C -9 UNP P63279 EXPRESSION TAG SEQADV 9DRJ SER C -8 UNP P63279 EXPRESSION TAG SEQADV 9DRJ GLY C -7 UNP P63279 EXPRESSION TAG SEQADV 9DRJ LEU C -6 UNP P63279 EXPRESSION TAG SEQADV 9DRJ VAL C -5 UNP P63279 EXPRESSION TAG SEQADV 9DRJ PRO C -4 UNP P63279 EXPRESSION TAG SEQADV 9DRJ ARG C -3 UNP P63279 EXPRESSION TAG SEQADV 9DRJ GLY C -2 UNP P63279 EXPRESSION TAG SEQADV 9DRJ SER C -1 UNP P63279 EXPRESSION TAG SEQADV 9DRJ HIS C 0 UNP P63279 EXPRESSION TAG SEQADV 9DRJ SER C 138 UNP P63279 CYS 138 ENGINEERED MUTATION SEQADV 9DRJ MET D -19 UNP P63165 INITIATING METHIONINE SEQADV 9DRJ GLY D -18 UNP P63165 EXPRESSION TAG SEQADV 9DRJ SER D -17 UNP P63165 EXPRESSION TAG SEQADV 9DRJ SER D -16 UNP P63165 EXPRESSION TAG SEQADV 9DRJ HIS D -15 UNP P63165 EXPRESSION TAG SEQADV 9DRJ HIS D -14 UNP P63165 EXPRESSION TAG SEQADV 9DRJ HIS D -13 UNP P63165 EXPRESSION TAG SEQADV 9DRJ HIS D -12 UNP P63165 EXPRESSION TAG SEQADV 9DRJ HIS D -11 UNP P63165 EXPRESSION TAG SEQADV 9DRJ HIS D -10 UNP P63165 EXPRESSION TAG SEQADV 9DRJ SER D -9 UNP P63165 EXPRESSION TAG SEQADV 9DRJ SER D -8 UNP P63165 EXPRESSION TAG SEQADV 9DRJ GLY D -7 UNP P63165 EXPRESSION TAG SEQADV 9DRJ LEU D -6 UNP P63165 EXPRESSION TAG SEQADV 9DRJ VAL D -5 UNP P63165 EXPRESSION TAG SEQADV 9DRJ PRO D -4 UNP P63165 EXPRESSION TAG SEQADV 9DRJ ARG D -3 UNP P63165 EXPRESSION TAG SEQADV 9DRJ GLY D -2 UNP P63165 EXPRESSION TAG SEQADV 9DRJ SER D -1 UNP P63165 EXPRESSION TAG SEQADV 9DRJ HIS D 0 UNP P63165 EXPRESSION TAG SEQRES 1 A 346 MET VAL GLU LYS GLU GLU ALA GLY GLY GLY ILE SER GLU SEQRES 2 A 346 GLU GLU ALA ALA GLN TYR ASP ARG GLN ILE ARG LEU TRP SEQRES 3 A 346 GLY LEU GLU ALA GLN LYS ARG LEU ARG ALA SER ARG VAL SEQRES 4 A 346 LEU LEU VAL GLY LEU LYS GLY LEU GLY ALA GLU ILE ALA SEQRES 5 A 346 LYS ASN LEU ILE LEU ALA GLY VAL LYS GLY LEU THR MET SEQRES 6 A 346 LEU ASP HIS GLU GLN VAL THR PRO GLU ASP PRO GLY ALA SEQRES 7 A 346 GLN PHE LEU ILE ARG THR GLY SER VAL GLY ARG ASN ARG SEQRES 8 A 346 ALA GLU ALA SER LEU GLU ARG ALA GLN ASN LEU ASN PRO SEQRES 9 A 346 MET VAL ASP VAL LYS VAL ASP THR GLU ASP ILE GLU LYS SEQRES 10 A 346 LYS PRO GLU SER PHE PHE THR GLN PHE ASP ALA VAL CYS SEQRES 11 A 346 LEU THR CYS CYS SER ARG ASP VAL ILE VAL LYS VAL ASP SEQRES 12 A 346 GLN ILE CYS HIS LYS ASN SER ILE LYS PHE PHE THR GLY SEQRES 13 A 346 ASP VAL PHE GLY TYR HIS GLY TYR THR PHE ALA ASN LEU SEQRES 14 A 346 GLY GLU HIS GLU PHE VAL GLU GLU LYS THR LYS VAL ALA SEQRES 15 A 346 LYS VAL SER GLN GLY VAL GLU ASP GLY PRO ASP THR LYS SEQRES 16 A 346 ARG ALA LYS LEU ASP SER SER GLU THR THR MET VAL LYS SEQRES 17 A 346 LYS LYS VAL VAL PHE CYS PRO VAL LYS GLU ALA LEU GLU SEQRES 18 A 346 VAL ASP TRP SER SER GLU LYS ALA LYS ALA ALA LEU LYS SEQRES 19 A 346 ARG THR THR SER ASP TYR PHE LEU LEU GLN VAL LEU LEU SEQRES 20 A 346 LYS PHE ARG THR ASP LYS GLY ARG ASP PRO SER SER ASP SEQRES 21 A 346 THR TYR GLU GLU ASP SER GLU LEU LEU LEU GLN ILE ARG SEQRES 22 A 346 ASN ASP VAL LEU ASP SER LEU GLY ILE SER PRO ASP LEU SEQRES 23 A 346 LEU PRO GLU ASP PHE VAL ARG TYR CYS PHE SER GLU MET SEQRES 24 A 346 ALA PRO VAL CYS ALA VAL VAL GLY GLY ILE LEU ALA GLN SEQRES 25 A 346 GLU ILE VAL LYS ALA LEU SER GLN ARG ASP PRO PRO HIS SEQRES 26 A 346 ASN ASN PHE PHE PHE PHE ASP GLY MET LYS GLY ASN GLY SEQRES 27 A 346 ILE VAL GLU CYS LEU GLY PRO LYS SEQRES 1 B 548 MET ALA LEU SER ARG GLY LEU PRO ARG GLU LEU ALA GLU SEQRES 2 B 548 ALA VAL ALA GLY GLY ARG VAL LEU VAL VAL GLY ALA GLY SEQRES 3 B 548 GLY ILE GLY CYS GLU LEU LEU LYS ASN LEU VAL LEU THR SEQRES 4 B 548 GLY PHE SER HIS ILE ASP LEU ILE ASP LEU ASP THR ILE SEQRES 5 B 548 ASP VAL SER ASN LEU ASN ARG GLN PHE LEU PHE GLN LYS SEQRES 6 B 548 LYS HIS VAL GLY ARG SER LYS ALA GLN VAL ALA LYS GLU SEQRES 7 B 548 SER VAL LEU GLN PHE TYR PRO LYS ALA ASN ILE VAL ALA SEQRES 8 B 548 TYR HIS ASP SER ILE MET ASN PRO ASP TYR ASN VAL GLU SEQRES 9 B 548 PHE PHE ARG GLN PHE ILE LEU VAL MET ASN ALA LEU ASP SEQRES 10 B 548 ASN ARG ALA ALA ARG ASN HIS VAL ASN ARG MET CYS LEU SEQRES 11 B 548 ALA ALA ASP VAL PRO LEU ILE GLU SER GLY THR ALA GLY SEQRES 12 B 548 TYR LEU GLY GLN VAL THR THR ILE LYS LYS GLY VAL THR SEQRES 13 B 548 GLU CYS TYR GLU CYS HIS PRO LYS PRO THR GLN ARG THR SEQRES 14 B 548 PHE PRO GLY CYS THR ILE ARG ASN THR PRO SER GLU PRO SEQRES 15 B 548 ILE HIS CYS ILE VAL TRP ALA LYS TYR LEU PHE ASN GLN SEQRES 16 B 548 LEU PHE GLY GLU GLU ASP ALA ASP GLN GLU VAL SER PRO SEQRES 17 B 548 ASP ARG ALA ASP PRO GLU ALA ALA TRP GLU PRO THR GLU SEQRES 18 B 548 ALA GLU ALA ARG ALA ARG ALA SER ASN GLU ASP GLY ASP SEQRES 19 B 548 ILE LYS ARG ILE SER THR LYS GLU TRP ALA LYS SER THR SEQRES 20 B 548 GLY TYR ASP PRO VAL LYS LEU PHE THR LYS LEU PHE LYS SEQRES 21 B 548 ASP ASP ILE ARG TYR LEU LEU THR MET ASP LYS LEU TRP SEQRES 22 B 548 ARG LYS ARG LYS PRO PRO VAL PRO LEU ASP TRP ALA GLU SEQRES 23 B 548 VAL GLN SER GLN GLY GLU GLU THR ASN ALA SER ASP GLN SEQRES 24 B 548 GLN ASN GLU PRO GLN LEU GLY LEU LYS ASP GLN GLN VAL SEQRES 25 B 548 LEU ASP VAL LYS SER TYR ALA ARG LEU PHE SER LYS SER SEQRES 26 B 548 ILE GLU THR LEU ARG VAL HIS LEU ALA GLU LYS GLY ASP SEQRES 27 B 548 GLY ALA GLU LEU ILE TRP ASP LYS ASP ASP PRO SER ALA SEQRES 28 B 548 MET ASP PHE VAL THR SER ALA ALA ASN LEU ARG MET HIS SEQRES 29 B 548 ILE PHE SER MET ASN MET LYS SER ARG PHE ASP ILE LYS SEQRES 30 B 548 SER MET ALA GLY ASN ILE ILE PRO ALA ILE ALA THR THR SEQRES 31 B 548 ASN ALA VAL ILE ALA GLY LEU ILE VAL LEU GLU GLY LEU SEQRES 32 B 548 LYS ILE LEU SER GLY LYS ILE ASP GLN CYS ARG THR ILE SEQRES 33 B 548 PHE LEU ASN LYS GLN PRO ASN PRO ARG LYS LYS LEU LEU SEQRES 34 B 548 VAL PRO CYS ALA LEU ASP PRO PRO ASN PRO ASN CYS TYR SEQRES 35 B 548 VAL CYS ALA SER LYS PRO GLU VAL THR VAL ARG LEU ASN SEQRES 36 B 548 VAL HIS LYS VAL THR VAL LEU THR LEU GLN ASP LYS ILE SEQRES 37 B 548 VAL LYS GLU LYS PHE ALA MET VAL ALA PRO ASP VAL GLN SEQRES 38 B 548 ILE GLU ASP GLY LYS GLY THR ILE LEU ILE SER SER GLU SEQRES 39 B 548 GLU GLY GLU THR GLU ALA ASN ASN HIS LYS LYS LEU SER SEQRES 40 B 548 GLU PHE GLY ILE ARG ASN GLY SER ARG LEU GLN ALA ASP SEQRES 41 B 548 ASP PHE LEU GLN ASP TYR THR LEU LEU ILE ASN ILE LEU SEQRES 42 B 548 HIS SER GLU ASP LEU GLY LYS ASP VAL GLU PHE GLU VAL SEQRES 43 B 548 VAL GLY SEQRES 1 C 178 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 C 178 LEU VAL PRO ARG GLY SER HIS MET SER GLY ILE ALA LEU SEQRES 3 C 178 SER ARG LEU ALA GLN GLU ARG LYS ALA TRP ARG LYS ASP SEQRES 4 C 178 HIS PRO PHE GLY PHE VAL ALA VAL PRO THR LYS ASN PRO SEQRES 5 C 178 ASP GLY THR MET ASN LEU MET ASN TRP GLU CYS ALA ILE SEQRES 6 C 178 PRO GLY LYS LYS GLY THR PRO TRP GLU GLY GLY LEU PHE SEQRES 7 C 178 LYS LEU ARG MET LEU PHE LYS ASP ASP TYR PRO SER SER SEQRES 8 C 178 PRO PRO LYS CYS LYS PHE GLU PRO PRO LEU PHE HIS PRO SEQRES 9 C 178 ASN VAL TYR PRO SER GLY THR VAL CYS LEU SER ILE LEU SEQRES 10 C 178 GLU GLU ASP LYS ASP TRP ARG PRO ALA ILE THR ILE LYS SEQRES 11 C 178 GLN ILE LEU LEU GLY ILE GLN GLU LEU LEU ASN GLU PRO SEQRES 12 C 178 ASN ILE GLN ASP PRO ALA GLN ALA GLU ALA TYR THR ILE SEQRES 13 C 178 TYR SER GLN ASN ARG VAL GLU TYR GLU LYS ARG VAL ARG SEQRES 14 C 178 ALA GLN ALA LYS LYS PHE ALA PRO SER SEQRES 1 D 117 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 D 117 LEU VAL PRO ARG GLY SER HIS MET SER ASP GLN GLU ALA SEQRES 3 D 117 LYS PRO SER THR GLU ASP LEU GLY ASP LYS LYS GLU GLY SEQRES 4 D 117 GLU TYR ILE LYS LEU LYS VAL ILE GLY GLN ASP SER SER SEQRES 5 D 117 GLU ILE HIS PHE LYS VAL LYS MET THR THR HIS LEU LYS SEQRES 6 D 117 LYS LEU LYS GLU SER TYR CYS GLN ARG GLN GLY VAL PRO SEQRES 7 D 117 MET ASN SER LEU ARG PHE LEU PHE GLU GLY GLN ARG ILE SEQRES 8 D 117 ALA ASP ASN HIS THR PRO LYS GLU LEU GLY MET GLU GLU SEQRES 9 D 117 GLU ASP VAL ILE GLU VAL TYR GLN GLU GLN THR GLY GLY HET ZN B 601 1 HET AMP D 601 23 HETNAM ZN ZINC ION HETNAM AMP ADENOSINE MONOPHOSPHATE FORMUL 5 ZN ZN 2+ FORMUL 6 AMP C10 H14 N5 O7 P HELIX 1 AA1 SER A 12 GLY A 27 1 16 HELIX 2 AA2 GLY A 27 ALA A 36 1 10 HELIX 3 AA3 LYS A 45 GLY A 59 1 15 HELIX 4 AA4 ASN A 90 ASN A 103 1 14 HELIX 5 AA5 PRO A 119 THR A 124 1 6 HELIX 6 AA6 SER A 135 ASN A 149 1 15 HELIX 7 AA7 PRO A 215 LEU A 220 1 6 HELIX 8 AA8 SER A 226 THR A 236 1 11 HELIX 9 AA9 SER A 238 GLY A 254 1 17 HELIX 10 AB1 SER A 258 ASP A 260 5 3 HELIX 11 AB2 THR A 261 LEU A 280 1 20 HELIX 12 AB3 SER A 283 LEU A 287 5 5 HELIX 13 AB4 PRO A 288 TYR A 294 5 7 HELIX 14 AB5 MET A 299 GLN A 320 1 22 HELIX 15 AB6 PRO B 8 GLY B 18 1 11 HELIX 16 AB7 GLY B 26 GLY B 40 1 15 HELIX 17 AB8 ASP B 53 ARG B 59 5 7 HELIX 18 AB9 GLN B 64 VAL B 68 5 5 HELIX 19 AC1 SER B 71 TYR B 84 1 14 HELIX 20 AC2 ASN B 102 ARG B 107 1 6 HELIX 21 AC3 ASN B 118 ASP B 133 1 16 HELIX 22 AC4 PRO B 171 ASN B 177 1 7 HELIX 23 AC5 GLU B 181 GLY B 198 1 18 HELIX 24 AC6 ALA B 222 ASN B 230 1 9 HELIX 25 AC7 SER B 239 GLY B 248 1 10 HELIX 26 AC8 ASP B 250 LYS B 260 1 11 HELIX 27 AC9 LYS B 260 MET B 269 1 10 HELIX 28 AD1 ASP B 270 ARG B 274 5 5 HELIX 29 AD2 ASP B 283 GLN B 290 1 8 HELIX 30 AD3 LEU B 307 GLN B 311 5 5 HELIX 31 AD4 ASP B 314 LYS B 336 1 23 HELIX 32 AD5 GLY B 337 ALA B 340 5 4 HELIX 33 AD6 ASP B 348 PHE B 366 1 19 HELIX 34 AD7 SER B 372 GLY B 381 1 10 HELIX 35 AD8 ILE B 387 SER B 407 1 21 HELIX 36 AD9 LYS B 409 GLN B 412 5 4 HELIX 37 AE1 VAL B 456 VAL B 459 5 4 HELIX 38 AE2 THR B 460 LYS B 467 1 8 HELIX 39 AE3 LYS B 505 GLY B 510 5 6 HELIX 40 AE4 SER C 2 ASP C 19 1 18 HELIX 41 AE5 LEU C 94 GLU C 98 5 5 HELIX 42 AE6 THR C 108 GLU C 122 1 15 HELIX 43 AE7 GLU C 132 GLN C 139 1 8 HELIX 44 AE8 ASN C 140 PHE C 155 1 16 HELIX 45 AE9 LEU D 44 GLY D 56 1 13 HELIX 46 AF1 THR D 76 GLY D 81 1 6 SHEET 1 AA116 ASP A 107 ASP A 111 0 SHEET 2 AA116 GLY A 62 LEU A 66 1 N LEU A 63 O LYS A 109 SHEET 3 AA116 ARG A 38 VAL A 42 1 N LEU A 41 O LEU A 66 SHEET 4 AA116 ALA A 128 THR A 132 1 O CYS A 130 N LEU A 40 SHEET 5 AA116 LYS A 152 PHE A 159 1 O PHE A 154 N VAL A 129 SHEET 6 AA116 HIS A 162 ASN A 168 -1 O HIS A 162 N PHE A 159 SHEET 7 AA116 PHE A 328 ASP A 332 -1 O PHE A 331 N GLY A 163 SHEET 8 AA116 ASN A 337 GLU A 341 -1 O ILE A 339 N PHE A 330 SHEET 9 AA116 LYS B 427 ALA B 433 -1 O LEU B 428 N GLY A 338 SHEET 10 AA116 ARG B 414 LEU B 418 -1 N THR B 415 O CYS B 432 SHEET 11 AA116 LEU B 145 ILE B 151 -1 N GLY B 146 O LEU B 418 SHEET 12 AA116 LEU B 136 ALA B 142 -1 N LEU B 136 O ILE B 151 SHEET 13 AA116 LEU B 111 ASN B 114 1 N ASN B 114 O ILE B 137 SHEET 14 AA116 ARG B 19 VAL B 23 1 N LEU B 21 O MET B 113 SHEET 15 AA116 HIS B 43 ASP B 48 1 O ASP B 45 N VAL B 22 SHEET 16 AA116 ASN B 88 HIS B 93 1 O VAL B 90 N LEU B 46 SHEET 1 AA2 2 GLU A 171 GLU A 177 0 SHEET 2 AA2 2 MET A 206 VAL A 212 -1 O VAL A 211 N HIS A 172 SHEET 1 AA3 8 PHE B 544 VAL B 547 0 SHEET 2 AA3 8 THR B 451 LEU B 454 -1 N ARG B 453 O GLU B 545 SHEET 3 AA3 8 THR B 527 HIS B 534 1 O ASN B 531 N VAL B 452 SHEET 4 AA3 8 ARG B 516 ASP B 521 -1 N ALA B 519 O LEU B 528 SHEET 5 AA3 8 PRO B 478 ILE B 482 -1 N GLN B 481 O GLN B 518 SHEET 6 AA3 8 THR B 488 ILE B 491 -1 O ILE B 491 N VAL B 480 SHEET 7 AA3 8 MET C 36 PRO C 46 -1 O MET C 36 N ILE B 489 SHEET 8 AA3 8 VAL C 25 LYS C 30 -1 N THR C 29 O ASN C 40 SHEET 1 AA4 9 PHE B 544 VAL B 547 0 SHEET 2 AA4 9 THR B 451 LEU B 454 -1 N ARG B 453 O GLU B 545 SHEET 3 AA4 9 THR B 527 HIS B 534 1 O ASN B 531 N VAL B 452 SHEET 4 AA4 9 ARG B 516 ASP B 521 -1 N ALA B 519 O LEU B 528 SHEET 5 AA4 9 PRO B 478 ILE B 482 -1 N GLN B 481 O GLN B 518 SHEET 6 AA4 9 THR B 488 ILE B 491 -1 O ILE B 491 N VAL B 480 SHEET 7 AA4 9 MET C 36 PRO C 46 -1 O MET C 36 N ILE B 489 SHEET 8 AA4 9 LEU C 57 LEU C 63 -1 O LEU C 60 N CYS C 43 SHEET 9 AA4 9 LYS C 74 PHE C 77 -1 O LYS C 76 N ARG C 61 SHEET 1 AA5 5 GLU D 33 VAL D 38 0 SHEET 2 AA5 5 ILE D 22 ILE D 27 -1 N LEU D 24 O PHE D 36 SHEET 3 AA5 5 ASP D 86 GLN D 92 1 O ASP D 86 N LYS D 25 SHEET 4 AA5 5 LEU D 62 PHE D 66 -1 N LEU D 65 O GLU D 89 SHEET 5 AA5 5 GLN D 69 ARG D 70 -1 O GLN D 69 N PHE D 66 SSBOND 1 CYS B 173 CYS C 93 1555 1555 2.03 LINK SG CYS B 158 ZN ZN B 601 1555 1555 2.33 LINK SG CYS B 161 ZN ZN B 601 1555 1555 2.33 LINK SG CYS B 441 ZN ZN B 601 1555 1555 2.32 LINK SG CYS B 444 ZN ZN B 601 1555 1555 2.33 CISPEP 1 TYR C 68 PRO C 69 0 2.17 CISPEP 2 GLU C 78 PRO C 79 0 -0.92 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 TER 2446 PRO A 345 TER 6614 GLY B 548 TER 7892 PRO C 157 TER 8520 GLY D 97 HETATM 8521 ZN ZN B 601 116.624 89.842 109.751 1.00 69.07 ZN HETATM 8522 P AMP D 601 103.820 106.883 97.318 1.00 14.76 P HETATM 8523 O1P AMP D 601 102.648 106.997 96.379 1.00 13.82 O HETATM 8524 O2P AMP D 601 104.339 108.217 97.794 1.00 21.70 O HETATM 8525 O3P AMP D 601 104.895 105.916 96.884 1.00 18.85 O HETATM 8526 O5' AMP D 601 103.196 106.230 98.630 1.00 13.76 O HETATM 8527 C5' AMP D 601 102.909 104.836 98.701 1.00 14.79 C HETATM 8528 C4' AMP D 601 101.475 104.547 98.334 1.00 15.89 C HETATM 8529 O4' AMP D 601 101.055 103.300 98.958 1.00 15.78 O HETATM 8530 C3' AMP D 601 100.472 105.612 98.786 1.00 14.91 C HETATM 8531 O3' AMP D 601 99.503 105.813 97.758 1.00 12.58 O HETATM 8532 C2' AMP D 601 99.801 104.964 99.995 1.00 12.15 C HETATM 8533 O2' AMP D 601 98.496 105.427 100.263 1.00 13.29 O HETATM 8534 C1' AMP D 601 99.809 103.499 99.587 1.00 17.12 C HETATM 8535 N9 AMP D 601 99.652 102.539 100.688 1.00 19.96 N HETATM 8536 C8 AMP D 601 99.076 101.330 100.540 1.00 18.30 C HETATM 8537 N7 AMP D 601 99.026 100.645 101.707 1.00 12.73 N HETATM 8538 C5 AMP D 601 99.571 101.432 102.647 1.00 19.62 C HETATM 8539 C6 AMP D 601 99.834 101.311 104.098 1.00 18.17 C HETATM 8540 N6 AMP D 601 99.490 100.194 104.780 1.00 13.46 N HETATM 8541 N1 AMP D 601 100.425 102.354 104.718 1.00 14.54 N HETATM 8542 C2 AMP D 601 100.769 103.468 104.049 1.00 18.08 C HETATM 8543 N3 AMP D 601 100.564 103.642 102.733 1.00 16.78 N HETATM 8544 C4 AMP D 601 99.974 102.683 101.980 1.00 12.55 C CONECT 3633 8521 CONECT 3660 8521 CONECT 3755 7365 CONECT 5775 8521 CONECT 5800 8521 CONECT 7365 3755 CONECT 8521 3633 3660 5775 5800 CONECT 8522 8523 8524 8525 8526 CONECT 8523 8522 CONECT 8524 8522 CONECT 8525 8522 CONECT 8526 8522 8527 CONECT 8527 8526 8528 CONECT 8528 8527 8529 8530 CONECT 8529 8528 8534 CONECT 8530 8528 8531 8532 CONECT 8531 8530 CONECT 8532 8530 8533 8534 CONECT 8533 8532 CONECT 8534 8529 8532 8535 CONECT 8535 8534 8536 8544 CONECT 8536 8535 8537 CONECT 8537 8536 8538 CONECT 8538 8537 8539 8544 CONECT 8539 8538 8540 8541 CONECT 8540 8539 CONECT 8541 8539 8542 CONECT 8542 8541 8543 CONECT 8543 8542 8544 CONECT 8544 8535 8538 8543 MASTER 276 0 2 46 40 0 0 6 8540 4 30 93 END