HEADER VIRAL PROTEIN 26-SEP-24 9DRQ TITLE MUMPS VIRUS FUSION GLYCOPROTEIN F STABILIZED IN PREFUSION CONFORMATION CAVEAT 9DRQ RESIDUES ALA A 71 AND ILE A 88 THAT ARE NEXT TO EACH OTHER CAVEAT 2 9DRQ IN THE SAMPLE SEQUENCE ARE NOT PROPERLY LINKED: DISTANCE CAVEAT 3 9DRQ BETWEEN C AND N IS 9.80 A. COMPND MOL_ID: 1; COMPND 2 MOLECULE: FUSION GLYCOPROTEIN F0; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUMPS ORTHORUBULAVIRUS; SOURCE 3 ORGANISM_TAXID: 2560602; SOURCE 4 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 9606 KEYWDS MUMPS VIRUS, FUSION PROTEIN, PREFUSION CONFORMATION, VACCINE, VIRAL KEYWDS 2 PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR Y.T.LAI,G.B.E.STEWART-JONES REVDAT 1 19-FEB-25 9DRQ 0 JRNL AUTH R.J.LOOMIS,Y.T.LAI,S.B.SOWERS,B.FISHER,A.DERRIEN-COLEMYN, JRNL AUTH 2 D.R.AMBROZAK,Y.TSYBOVSKY,S.N.CROOKE,D.R.LATNER,W.P.KONG, JRNL AUTH 3 T.J.RUCKWARDT,S.A.PLOTKIN,P.D.KWONG,J.R.MASCOLA,B.S.GRAHAM, JRNL AUTH 4 C.J.HICKMAN,G.B.E.STEWART-JONES JRNL TITL STRUCTURE-BASED DESIGN OF GLYCOPROTEIN SUBUNIT VACCINES FOR JRNL TITL 2 MUMPS. JRNL REF PROC.NATL.ACAD.SCI.USA V. 121 53121 2024 JRNL REFN ESSN 1091-6490 JRNL PMID 39527740 JRNL DOI 10.1073/PNAS.2404053121 REMARK 2 REMARK 2 RESOLUTION. 2.16 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.16_3549 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.16 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 37.41 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 3 NUMBER OF REFLECTIONS : 27163 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.209 REMARK 3 R VALUE (WORKING SET) : 0.207 REMARK 3 FREE R VALUE : 0.246 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1359 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 37.4100 - 4.6649 0.99 2744 145 0.1881 0.2074 REMARK 3 2 4.6649 - 3.7037 0.99 2619 138 0.1717 0.2018 REMARK 3 3 3.7037 - 3.2358 1.00 2592 136 0.2073 0.2382 REMARK 3 4 3.2358 - 2.9401 1.00 2592 137 0.2355 0.2779 REMARK 3 5 2.9401 - 2.7294 1.00 2562 135 0.2483 0.3519 REMARK 3 6 2.7294 - 2.5686 1.00 2542 133 0.2438 0.2878 REMARK 3 7 2.5686 - 2.4399 1.00 2573 135 0.2461 0.3333 REMARK 3 8 2.4399 - 2.3338 1.00 2530 134 0.2600 0.3390 REMARK 3 9 2.3338 - 2.2439 1.00 2551 135 0.2844 0.3148 REMARK 3 10 2.2439 - 2.1665 0.98 2499 131 0.3077 0.4027 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.360 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 28.750 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 3546 REMARK 3 ANGLE : 0.868 4829 REMARK 3 CHIRALITY : 0.058 628 REMARK 3 PLANARITY : 0.005 607 REMARK 3 DIHEDRAL : 16.412 2192 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ( CHAIN A AND RESID 0:148 ) REMARK 3 ORIGIN FOR THE GROUP (A): -21.125 9.670 51.970 REMARK 3 T TENSOR REMARK 3 T11: 0.3230 T22: 0.4571 REMARK 3 T33: 0.3801 T12: 0.0605 REMARK 3 T13: -0.0124 T23: -0.0047 REMARK 3 L TENSOR REMARK 3 L11: -0.0011 L22: 1.8541 REMARK 3 L33: 1.8561 L12: 0.1523 REMARK 3 L13: -0.0881 L23: -1.0319 REMARK 3 S TENSOR REMARK 3 S11: -0.0176 S12: -0.0045 S13: 0.0302 REMARK 3 S21: 0.1737 S22: -0.0867 S23: -0.1057 REMARK 3 S31: 0.0991 S32: 0.3181 S33: 0.1245 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: ( CHAIN A AND RESID 149:271 ) REMARK 3 ORIGIN FOR THE GROUP (A): -25.932 15.072 55.175 REMARK 3 T TENSOR REMARK 3 T11: 0.4192 T22: 0.4156 REMARK 3 T33: 0.4448 T12: 0.0477 REMARK 3 T13: -0.0066 T23: 0.0100 REMARK 3 L TENSOR REMARK 3 L11: 0.3177 L22: 0.4721 REMARK 3 L33: 2.8310 L12: 0.2753 REMARK 3 L13: -0.3023 L23: -0.5529 REMARK 3 S TENSOR REMARK 3 S11: -0.0180 S12: 0.0063 S13: -0.0523 REMARK 3 S21: 0.1302 S22: -0.0875 S23: -0.0461 REMARK 3 S31: 0.0061 S32: 0.0869 S33: 0.1075 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: ( CHAIN A AND RESID 272:456 ) REMARK 3 ORIGIN FOR THE GROUP (A): -28.614 35.931 18.433 REMARK 3 T TENSOR REMARK 3 T11: 0.3568 T22: 0.3956 REMARK 3 T33: 0.3932 T12: 0.0005 REMARK 3 T13: -0.0015 T23: 0.0481 REMARK 3 L TENSOR REMARK 3 L11: 1.2579 L22: 1.0495 REMARK 3 L33: 1.8981 L12: 0.1220 REMARK 3 L13: 0.5808 L23: -0.2264 REMARK 3 S TENSOR REMARK 3 S11: -0.1051 S12: 0.0643 S13: 0.2702 REMARK 3 S21: -0.0034 S22: -0.0399 S23: -0.0006 REMARK 3 S31: -0.3212 S32: 0.0910 S33: 0.1527 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 9DRQ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 18-NOV-24. REMARK 100 THE DEPOSITION ID IS D_1000288581. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 14-DEC-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 22-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 27169 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.160 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 16.60 REMARK 200 R MERGE (I) : 0.13400 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 18.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.16 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.24 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 52.29 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.58 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M IMIDAZOLE PH 8.0, 35% PEG1000, REMARK 280 0.2 M CALCIUM ACETATE, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: H 3 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z REMARK 290 6555 -X,-X+Y,-Z REMARK 290 7555 X+2/3,Y+1/3,Z+1/3 REMARK 290 8555 -Y+2/3,X-Y+1/3,Z+1/3 REMARK 290 9555 -X+Y+2/3,-X+1/3,Z+1/3 REMARK 290 10555 Y+2/3,X+1/3,-Z+1/3 REMARK 290 11555 X-Y+2/3,-Y+1/3,-Z+1/3 REMARK 290 12555 -X+2/3,-X+Y+1/3,-Z+1/3 REMARK 290 13555 X+1/3,Y+2/3,Z+2/3 REMARK 290 14555 -Y+1/3,X-Y+2/3,Z+2/3 REMARK 290 15555 -X+Y+1/3,-X+2/3,Z+2/3 REMARK 290 16555 Y+1/3,X+2/3,-Z+2/3 REMARK 290 17555 X-Y+1/3,-Y+2/3,-Z+2/3 REMARK 290 18555 -X+1/3,-X+Y+2/3,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 7 1.000000 0.000000 0.000000 37.41150 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 21.59954 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 153.61800 REMARK 290 SMTRY1 8 -0.500000 -0.866025 0.000000 37.41150 REMARK 290 SMTRY2 8 0.866025 -0.500000 0.000000 21.59954 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 153.61800 REMARK 290 SMTRY1 9 -0.500000 0.866025 0.000000 37.41150 REMARK 290 SMTRY2 9 -0.866025 -0.500000 0.000000 21.59954 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 153.61800 REMARK 290 SMTRY1 10 -0.500000 0.866025 0.000000 37.41150 REMARK 290 SMTRY2 10 0.866025 0.500000 0.000000 21.59954 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 153.61800 REMARK 290 SMTRY1 11 1.000000 0.000000 0.000000 37.41150 REMARK 290 SMTRY2 11 0.000000 -1.000000 0.000000 21.59954 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 153.61800 REMARK 290 SMTRY1 12 -0.500000 -0.866025 0.000000 37.41150 REMARK 290 SMTRY2 12 -0.866025 0.500000 0.000000 21.59954 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 153.61800 REMARK 290 SMTRY1 13 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 43.19908 REMARK 290 SMTRY3 13 0.000000 0.000000 1.000000 307.23600 REMARK 290 SMTRY1 14 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 14 0.866025 -0.500000 0.000000 43.19908 REMARK 290 SMTRY3 14 0.000000 0.000000 1.000000 307.23600 REMARK 290 SMTRY1 15 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 15 -0.866025 -0.500000 0.000000 43.19908 REMARK 290 SMTRY3 15 0.000000 0.000000 1.000000 307.23600 REMARK 290 SMTRY1 16 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 16 0.866025 0.500000 0.000000 43.19908 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 307.23600 REMARK 290 SMTRY1 17 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 17 0.000000 -1.000000 0.000000 43.19908 REMARK 290 SMTRY3 17 0.000000 0.000000 -1.000000 307.23600 REMARK 290 SMTRY1 18 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 18 -0.866025 0.500000 0.000000 43.19908 REMARK 290 SMTRY3 18 0.000000 0.000000 -1.000000 307.23600 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 24160 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 57150 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -30.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 -37.41150 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 64.79862 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -0.500000 0.866025 0.000000 -74.82300 REMARK 350 BIOMT2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O4 NAG C 1 O5 NAG C 2 2.15 REMARK 500 ND2 ASN A 162 O5 NAG A 501 2.18 REMARK 500 ND2 ASN A 162 C2 NAG A 501 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 40 93.42 -63.75 REMARK 500 ASN A 193 66.23 -118.17 REMARK 500 SER A 221 111.32 -166.65 REMARK 500 ASP A 386 -162.60 -121.46 REMARK 500 ASP A 396 -105.98 57.46 REMARK 500 GLN A 453 15.65 -67.28 REMARK 500 REMARK 500 REMARK: NULL DBREF 9DRQ A 0 456 UNP O91241 O91241_9MONO 20 476 SEQADV 9DRQ A UNP O91241 SER 92 DELETION SEQADV 9DRQ A UNP O91241 PRO 93 DELETION SEQADV 9DRQ A UNP O91241 SER 94 DELETION SEQADV 9DRQ A UNP O91241 PRO 95 DELETION SEQADV 9DRQ A UNP O91241 GLY 96 DELETION SEQADV 9DRQ A UNP O91241 SER 97 DELETION SEQADV 9DRQ A UNP O91241 ARG 98 DELETION SEQADV 9DRQ A UNP O91241 ARG 99 DELETION SEQADV 9DRQ A UNP O91241 HIS 100 DELETION SEQADV 9DRQ A UNP O91241 LYS 101 DELETION SEQADV 9DRQ A UNP O91241 ARG 102 DELETION SEQADV 9DRQ A UNP O91241 PHE 103 DELETION SEQADV 9DRQ A UNP O91241 ALA 104 DELETION SEQADV 9DRQ A UNP O91241 GLY 105 DELETION SEQADV 9DRQ A UNP O91241 ILE 106 DELETION SEQADV 9DRQ A UNP O91241 ALA 107 DELETION SEQADV 9DRQ CYS A 186 UNP O91241 VAL 206 CONFLICT SEQADV 9DRQ CYS A 203 UNP O91241 ALA 223 CONFLICT SEQRES 1 A 441 VAL ASN ILE ASN ILE LEU GLN GLN ILE GLY TYR ILE LYS SEQRES 2 A 441 GLN GLN VAL ARG GLN LEU SER TYR TYR SER GLN SER SER SEQRES 3 A 441 SER SER TYR ILE VAL VAL LYS LEU LEU PRO ASN ILE GLN SEQRES 4 A 441 PRO THR ASP ASP SER CYS GLU PHE LYS SER VAL THR GLN SEQRES 5 A 441 TYR ASN LYS THR LEU SER ASN LEU LEU LEU PRO ILE ALA SEQRES 6 A 441 GLU ASN ILE ASN ASN ILE ALA ILE GLY ILE ALA ALA LEU SEQRES 7 A 441 GLY VAL ALA THR ALA ALA GLN VAL THR ALA ALA VAL SER SEQRES 8 A 441 LEU VAL GLN ALA GLN THR ASN ALA ARG ALA ILE ALA ALA SEQRES 9 A 441 MET LYS ASN SER ILE GLN ALA THR ASN ARG ALA VAL PHE SEQRES 10 A 441 GLU VAL LYS GLU GLY THR GLN GLN LEU ALA ILE ALA VAL SEQRES 11 A 441 GLN ALA ILE GLN ASP HIS ILE ASN THR ILE MET ASN THR SEQRES 12 A 441 GLN LEU ASN ASN MET SER CYS GLN ILE LEU ASP ASN GLN SEQRES 13 A 441 LEU ALA THR SER LEU GLY LEU TYR LEU THR GLU LEU THR SEQRES 14 A 441 THR CYS PHE GLN PRO GLN LEU THR ASN PRO ALA LEU SER SEQRES 15 A 441 PRO ILE SER ILE GLN CYS LEU ARG SER LEU LEU GLY SER SEQRES 16 A 441 MET THR PRO ALA VAL VAL GLN ALA THR LEU SER THR SER SEQRES 17 A 441 ILE SER ALA ALA GLU ILE LEU SER ALA GLY LEU MET GLU SEQRES 18 A 441 GLY GLN ILE ILE SER VAL LEU LEU ASP GLU MET GLN MET SEQRES 19 A 441 ILE VAL LYS ILE ASN ILE PRO THR ILE VAL THR GLN SER SEQRES 20 A 441 ASN ALA LEU VAL ILE ASP PHE TYR SER ILE SER SER PHE SEQRES 21 A 441 ILE ASN ASN GLN GLU SER ILE ILE GLN LEU PRO ASP ARG SEQRES 22 A 441 ILE LEU GLU ILE GLY ASN GLU GLN TRP SER TYR PRO ALA SEQRES 23 A 441 LYS ASN CYS LYS LEU THR ARG HIS HIS ILE PHE CYS GLN SEQRES 24 A 441 TYR ASN GLU ALA GLU ARG LEU SER LEU GLU SER LYS LEU SEQRES 25 A 441 CYS LEU ALA GLY ASN ILE SER ALA CYS VAL PHE SER PRO SEQRES 26 A 441 ILE ALA GLY SER TYR MET ARG ARG PHE VAL ALA LEU ASP SEQRES 27 A 441 GLY THR ILE VAL ALA ASN CYS ARG SER LEU THR CYS LEU SEQRES 28 A 441 CYS LYS SER PRO SER TYR PRO ILE TYR GLN PRO ASP HIS SEQRES 29 A 441 HIS ALA VAL THR THR ILE ASP LEU THR ALA CYS GLN THR SEQRES 30 A 441 LEU SER LEU ASP GLY LEU ASP PHE SER ILE VAL SER LEU SEQRES 31 A 441 SER ASN ILE THR TYR ALA GLU ASN LEU THR ILE SER LEU SEQRES 32 A 441 SER GLN THR ILE ASN THR GLN PRO ILE ASP ILE SER THR SEQRES 33 A 441 GLU LEU SER LYS VAL ASN ALA SER LEU GLN ASN ALA VAL SEQRES 34 A 441 LYS TYR ILE LYS GLU SER ASN HIS GLN LEU GLN SER HET NAG B 1 14 HET NAG B 2 14 HET NAG C 1 14 HET NAG C 2 14 HET BMA C 3 11 HET MAN C 4 11 HET NAG A 501 14 HET NAG A 502 14 HET NAG A 503 14 HET NAG A 504 14 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM BMA BETA-D-MANNOPYRANOSE HETNAM MAN ALPHA-D-MANNOPYRANOSE HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE HETSYN BMA BETA-D-MANNOSE; D-MANNOSE; MANNOSE HETSYN MAN ALPHA-D-MANNOSE; D-MANNOSE; MANNOSE FORMUL 2 NAG 8(C8 H15 N O6) FORMUL 3 BMA C6 H12 O6 FORMUL 3 MAN C6 H12 O6 FORMUL 8 HOH *40(H2 O) HELIX 1 AA1 ASN A 1 GLN A 7 1 7 HELIX 2 AA2 PHE A 46 ALA A 71 1 26 HELIX 3 AA3 ILE A 90 GLY A 94 5 5 HELIX 4 AA4 THR A 97 ALA A 110 1 14 HELIX 5 AA5 ALA A 110 ALA A 119 1 10 HELIX 6 AA6 MET A 120 THR A 127 1 8 HELIX 7 AA7 ILE A 148 THR A 158 1 11 HELIX 8 AA8 SER A 164 THR A 184 1 21 HELIX 9 AA9 THR A 185 PHE A 187 5 3 HELIX 10 AB1 ASN A 193 SER A 197 5 5 HELIX 11 AB2 SER A 200 GLY A 209 1 10 HELIX 12 AB3 MET A 211 THR A 219 1 9 HELIX 13 AB4 SER A 225 GLY A 233 1 9 HELIX 14 AB5 SER A 322 ALA A 330 1 9 HELIX 15 AB6 ASN A 332 CYS A 336 5 5 HELIX 16 AB7 SER A 344 ARG A 347 5 4 HELIX 17 AB8 SER A 417 THR A 421 5 5 HELIX 18 AB9 GLN A 425 GLN A 453 1 29 SHEET 1 AA1 6 GLU A 295 SER A 298 0 SHEET 2 AA1 6 ARG A 288 ILE A 292 -1 N ILE A 292 O GLU A 295 SHEET 3 AA1 6 LEU A 265 SER A 271 -1 N ILE A 267 O ILE A 289 SHEET 4 AA1 6 TYR A 10 TYR A 20 -1 N ARG A 16 O VAL A 266 SHEET 5 AA1 6 HIS A 310 CYS A 313 1 O ILE A 311 N GLN A 17 SHEET 6 AA1 6 LYS A 305 LEU A 306 -1 N LYS A 305 O PHE A 312 SHEET 1 AA2 5 VAL A 131 GLU A 136 0 SHEET 2 AA2 5 GLN A 139 VAL A 145 -1 O LEU A 141 N VAL A 134 SHEET 3 AA2 5 SER A 24 LYS A 32 1 N LYS A 32 O VAL A 145 SHEET 4 AA2 5 GLN A 248 PRO A 256 -1 O ILE A 253 N SER A 27 SHEET 5 AA2 5 GLU A 236 LEU A 243 -1 N LEU A 243 O GLN A 248 SHEET 1 AA3 3 SER A 274 ILE A 276 0 SHEET 2 AA3 3 GLN A 279 ILE A 283 -1 O SER A 281 N SER A 274 SHEET 3 AA3 3 PHE A 338 PRO A 340 -1 O SER A 339 N ILE A 282 SHEET 1 AA4 3 PHE A 349 LEU A 352 0 SHEET 2 AA4 3 THR A 355 ALA A 358 -1 O THR A 355 N LEU A 352 SHEET 3 AA4 3 THR A 383 ILE A 385 -1 O ILE A 385 N ILE A 356 SHEET 1 AA5 4 PRO A 373 ILE A 374 0 SHEET 2 AA5 4 CYS A 365 CYS A 367 -1 N CYS A 365 O ILE A 374 SHEET 3 AA5 4 THR A 392 LEU A 395 -1 O SER A 394 N LEU A 366 SHEET 4 AA5 4 LEU A 398 SER A 401 -1 O PHE A 400 N LEU A 393 SSBOND 1 CYS A 44 CYS A 165 1555 1555 2.05 SSBOND 2 CYS A 186 CYS A 203 1555 1555 2.05 SSBOND 3 CYS A 304 CYS A 313 1555 1555 2.06 SSBOND 4 CYS A 328 CYS A 336 1555 1555 2.08 SSBOND 5 CYS A 360 CYS A 365 1555 1555 2.04 SSBOND 6 CYS A 367 CYS A 390 1555 1555 2.03 LINK ND2 ASN A 53 C1 NAG B 1 1555 1555 1.45 LINK ND2 ASN A 162 C1 NAG A 501 1555 1555 1.40 LINK ND2 ASN A 332 C1 NAG A 502 1555 1555 1.44 LINK ND2 ASN A 407 C1 NAG A 503 1555 1555 1.44 LINK ND2 ASN A 413 C1 NAG A 504 1555 1555 1.44 LINK ND2 ASN A 437 C1 NAG C 1 1555 1555 1.40 LINK O4 NAG B 1 C1 NAG B 2 1555 1555 1.38 LINK O4 NAG C 1 C1 NAG C 2 1555 1555 1.38 LINK O4 NAG C 2 C1 BMA C 3 1555 1555 1.37 LINK O3 BMA C 3 C1 MAN C 4 1555 1555 1.38 CRYST1 74.823 74.823 460.854 90.00 90.00 120.00 H 3 2 18 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013365 0.007716 0.000000 0.00000 SCALE2 0.000000 0.015432 0.000000 0.00000 SCALE3 0.000000 0.000000 0.002170 0.00000 CONECT 361 1138 CONECT 439 3370 CONECT 1118 3448 CONECT 1138 361 CONECT 1298 1427 CONECT 1427 1298 CONECT 2196 2276 CONECT 2276 2196 CONECT 2399 2449 CONECT 2424 3462 CONECT 2449 2399 CONECT 2629 2667 CONECT 2667 2629 CONECT 2681 2860 CONECT 2860 2681 CONECT 2986 3476 CONECT 3035 3490 CONECT 3217 3398 CONECT 3370 439 3371 3381 CONECT 3371 3370 3372 3378 CONECT 3372 3371 3373 3379 CONECT 3373 3372 3374 3380 CONECT 3374 3373 3375 3381 CONECT 3375 3374 3382 CONECT 3376 3377 3378 3383 CONECT 3377 3376 CONECT 3378 3371 3376 CONECT 3379 3372 CONECT 3380 3373 3384 CONECT 3381 3370 3374 CONECT 3382 3375 CONECT 3383 3376 CONECT 3384 3380 3385 3395 CONECT 3385 3384 3386 3392 CONECT 3386 3385 3387 3393 CONECT 3387 3386 3388 3394 CONECT 3388 3387 3389 3395 CONECT 3389 3388 3396 CONECT 3390 3391 3392 3397 CONECT 3391 3390 CONECT 3392 3385 3390 CONECT 3393 3386 CONECT 3394 3387 CONECT 3395 3384 3388 CONECT 3396 3389 CONECT 3397 3390 CONECT 3398 3217 3399 3409 CONECT 3399 3398 3400 3406 CONECT 3400 3399 3401 3407 CONECT 3401 3400 3402 3408 CONECT 3402 3401 3403 3409 CONECT 3403 3402 3410 CONECT 3404 3405 3406 3411 CONECT 3405 3404 CONECT 3406 3399 3404 CONECT 3407 3400 CONECT 3408 3401 3412 CONECT 3409 3398 3402 CONECT 3410 3403 CONECT 3411 3404 CONECT 3412 3408 3413 3423 CONECT 3413 3412 3414 3420 CONECT 3414 3413 3415 3421 CONECT 3415 3414 3416 3422 CONECT 3416 3415 3417 3423 CONECT 3417 3416 3424 CONECT 3418 3419 3420 3425 CONECT 3419 3418 CONECT 3420 3413 3418 CONECT 3421 3414 CONECT 3422 3415 3426 CONECT 3423 3412 3416 CONECT 3424 3417 CONECT 3425 3418 CONECT 3426 3422 3427 3435 CONECT 3427 3426 3428 3432 CONECT 3428 3427 3429 3433 CONECT 3429 3428 3430 3434 CONECT 3430 3429 3431 3435 CONECT 3431 3430 3436 CONECT 3432 3427 CONECT 3433 3428 3437 CONECT 3434 3429 CONECT 3435 3426 3430 CONECT 3436 3431 CONECT 3437 3433 3438 3446 CONECT 3438 3437 3439 3443 CONECT 3439 3438 3440 3444 CONECT 3440 3439 3441 3445 CONECT 3441 3440 3442 3446 CONECT 3442 3441 3447 CONECT 3443 3438 CONECT 3444 3439 CONECT 3445 3440 CONECT 3446 3437 3441 CONECT 3447 3442 CONECT 3448 1118 3449 3459 CONECT 3449 3448 3450 3456 CONECT 3450 3449 3451 3457 CONECT 3451 3450 3452 3458 CONECT 3452 3451 3453 3459 CONECT 3453 3452 3460 CONECT 3454 3455 3456 3461 CONECT 3455 3454 CONECT 3456 3449 3454 CONECT 3457 3450 CONECT 3458 3451 CONECT 3459 3448 3452 CONECT 3460 3453 CONECT 3461 3454 CONECT 3462 2424 3463 3473 CONECT 3463 3462 3464 3470 CONECT 3464 3463 3465 3471 CONECT 3465 3464 3466 3472 CONECT 3466 3465 3467 3473 CONECT 3467 3466 3474 CONECT 3468 3469 3470 3475 CONECT 3469 3468 CONECT 3470 3463 3468 CONECT 3471 3464 CONECT 3472 3465 CONECT 3473 3462 3466 CONECT 3474 3467 CONECT 3475 3468 CONECT 3476 2986 3477 3487 CONECT 3477 3476 3478 3484 CONECT 3478 3477 3479 3485 CONECT 3479 3478 3480 3486 CONECT 3480 3479 3481 3487 CONECT 3481 3480 3488 CONECT 3482 3483 3484 3489 CONECT 3483 3482 CONECT 3484 3477 3482 CONECT 3485 3478 CONECT 3486 3479 CONECT 3487 3476 3480 CONECT 3488 3481 CONECT 3489 3482 CONECT 3490 3035 3491 3501 CONECT 3491 3490 3492 3498 CONECT 3492 3491 3493 3499 CONECT 3493 3492 3494 3500 CONECT 3494 3493 3495 3501 CONECT 3495 3494 3502 CONECT 3496 3497 3498 3503 CONECT 3497 3496 CONECT 3498 3491 3496 CONECT 3499 3492 CONECT 3500 3493 CONECT 3501 3490 3494 CONECT 3502 3495 CONECT 3503 3496 MASTER 344 0 10 18 21 0 0 6 3542 1 152 34 END