data_9DUR # _entry.id 9DUR # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.407 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 9DUR pdb_00009dur 10.2210/pdb9dur/pdb WWPDB D_1000288756 ? ? EMDB EMD-47174 ? ? # _pdbx_audit_revision_history.ordinal 1 _pdbx_audit_revision_history.data_content_type 'Structure model' _pdbx_audit_revision_history.major_revision 1 _pdbx_audit_revision_history.minor_revision 0 _pdbx_audit_revision_history.revision_date 2025-11-19 _pdbx_audit_revision_history.part_number ? # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 9DUR _pdbx_database_status.recvd_initial_deposition_date 2024-10-04 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible N # _pdbx_database_related.db_name EMDB _pdbx_database_related.details 'Cryo-EM Structure of CRBN:dHTC1:ENL YEATS' _pdbx_database_related.db_id EMD-47174 _pdbx_database_related.content_type 'associated EM volume' # _pdbx_contact_author.id 3 _pdbx_contact_author.email eric_fischer@dfci.harvard.edu _pdbx_contact_author.name_first Eric _pdbx_contact_author.name_last Fischer _pdbx_contact_author.name_mi S _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0001-7337-6306 # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Cheong, H.' 1 0009-0001-3330-3126 'Hunkeler, M.' 2 0000-0003-0246-1188 'Fischer, E.S.' 3 0000-0001-7337-6306 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev Biorxiv _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 2692-8205 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume ? _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title 'High-throughput diversification of protein-ligand surfaces to discover chemical inducers of proximity.' _citation.year 2025 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1101/2024.09.30.615685 _citation.pdbx_database_id_PubMed 40950085 _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Shaum, J.B.' 1 0000-0003-1664-1091 primary 'Munoz I Ordono, M.' 2 0009-0003-4391-6393 primary 'Steen, E.A.' 3 0000-0002-5887-219X primary 'Wenge, D.V.' 4 0000-0002-0064-9104 primary 'Cheong, H.' 5 0009-0001-3330-3126 primary 'Hunkeler, M.' 6 0000-0003-0246-1188 primary 'Bilotta, E.M.' 7 0000-0001-7609-3037 primary 'Rutter, Z.' 8 0000-0002-7500-2276 primary 'Barta, P.A.' 9 0000-0001-6848-0758 primary 'Thornhill, A.M.' 10 ? primary 'Milosevich, N.' 11 ? primary 'Hargis, L.M.' 12 0000-0003-3977-8269 primary 'Janowski, J.' 13 0000-0002-6990-5719 primary 'Bishop, T.R.' 14 0000-0002-0321-7809 primary 'Carter, T.R.' 15 0000-0001-5938-4043 primary 'da Camara, B.' 16 0009-0002-2327-7240 primary 'Hinterndorfer, M.' 17 0000-0003-2435-4690 primary 'Dada, L.' 18 0000-0001-5846-0219 primary 'He, W.J.' 19 0000-0002-5117-2019 primary 'Offensperger, F.' 20 0009-0008-4304-2346 primary 'Furihata, H.' 21 0000-0002-0171-6751 primary 'Schweber, S.R.' 22 ? primary 'Hatton, C.' 23 0000-0001-9903-4291 primary 'Wen, Y.' 24 0000-0003-3536-6056 primary 'Cravatt, B.F.' 25 0000-0001-5330-3492 primary 'Engle, K.M.' 26 0000-0003-2767-6556 primary 'Donovan, K.A.' 27 0000-0002-8539-5106 primary 'Melillo, B.' 28 0000-0002-9708-5287 primary 'Kitamura, S.' 29 0000-0003-2453-849X primary 'Ciulli, A.' 30 0000-0002-8654-1670 primary 'Armstrong, S.A.' 31 0000-0002-9099-4728 primary 'Fischer, E.S.' 32 0000-0001-7337-6306 primary 'Winter, G.E.' 33 0000-0001-6606-1437 primary 'Erb, M.A.' 34 0000-0001-9993-3481 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Protein cereblon' 55144.594 1 ? ? ? 'N terminal FLAG tagged CRBN' 2 polymer man 'Protein ENL' 18225.002 1 ? ? 'YEATS domain' 'C terminal His tag' 3 non-polymer syn 'ZINC ION' 65.409 1 ? ? ? ? 4 non-polymer syn ;2-[3-[2-[4-[[(5~{S})-1,3-bis(oxidanylidene)-2,7-diazaspiro[4.4]nonan-7-yl]sulfonylamino]piperidin-1-yl]ethylcarbamoyl]phenyl]-~{N}-cyclobutyl-imidazo[1,2-a]pyridine-6-carboxamide ; 676.786 1 ? ? ? ? # _entity_name_com.entity_id 2 _entity_name_com.name 'YEATS domain-containing protein 1' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;MDYKDDDDKSAVDENLYFQGGGRGGSAHIVMVDAYKPTKGGSGMAGEGDQQDAAHNMGNHLPLLPAESEEEDEMEVEDQD SKEAKKPNIINFDTSLPTSHTYLGADMEEFHGRTLHDDDSCQVIPVLPQVMMILIPGQTLPLQLFHPQEVSMVRNLIQKD RTFAVLAYSNVQEREAQFGTTAEIYAYREEQDFGIEIVKVKAIGRQRFKVLELRTQSDGIQQAKVQILPECVLPSTMSAV QLESLNKCQIFPSKPVSREDQCSYKWWQKYQKRKFHCANLTSWPRWLYSLYDAETLMDRIKKQLREWDENLKDDSLPSNP IDFSYRVAACLPIDDVLRIQLLKIGSAIQRLRCELDIMNKCTSLCCKQCQETEITTKNEIFSLSLCGPMAAYVNPHGYVH ETLTVYKACNLNLIGRPSTEHSWFPGYAWTVAQCKICASHIGWKFTATKKDMSPQKFWGLTRSALLPTIPDTEDEISPDK VILCL ; ;MDYKDDDDKSAVDENLYFQGGGRGGSAHIVMVDAYKPTKGGSGMAGEGDQQDAAHNMGNHLPLLPAESEEEDEMEVEDQD SKEAKKPNIINFDTSLPTSHTYLGADMEEFHGRTLHDDDSCQVIPVLPQVMMILIPGQTLPLQLFHPQEVSMVRNLIQKD RTFAVLAYSNVQEREAQFGTTAEIYAYREEQDFGIEIVKVKAIGRQRFKVLELRTQSDGIQQAKVQILPECVLPSTMSAV QLESLNKCQIFPSKPVSREDQCSYKWWQKYQKRKFHCANLTSWPRWLYSLYDAETLMDRIKKQLREWDENLKDDSLPSNP IDFSYRVAACLPIDDVLRIQLLKIGSAIQRLRCELDIMNKCTSLCCKQCQETEITTKNEIFSLSLCGPMAAYVNPHGYVH ETLTVYKACNLNLIGRPSTEHSWFPGYAWTVAQCKICASHIGWKFTATKKDMSPQKFWGLTRSALLPTIPDTEDEISPDK VILCL ; B ? 2 'polypeptide(L)' no no ;MDNQCTVQVRLELGHRAQLRKKPTTEGFTHDWMVFVRGPEQCDIQHFVEKVVFWLHDSFPKPRRVCKEPPYKVEESGYAG FIMPIEVHFKNKEEPRKVCFTYDLFLNLEGNPPVNHLRCEKLTFNNPTTEFRYKLLRAGGVMVMPEGAHHHHHH ; ;MDNQCTVQVRLELGHRAQLRKKPTTEGFTHDWMVFVRGPEQCDIQHFVEKVVFWLHDSFPKPRRVCKEPPYKVEESGYAG FIMPIEVHFKNKEEPRKVCFTYDLFLNLEGNPPVNHLRCEKLTFNNPTTEFRYKLLRAGGVMVMPEGAHHHHHH ; C ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 'ZINC ION' ZN 4 ;2-[3-[2-[4-[[(5~{S})-1,3-bis(oxidanylidene)-2,7-diazaspiro[4.4]nonan-7-yl]sulfonylamino]piperidin-1-yl]ethylcarbamoyl]phenyl]-~{N}-cyclobutyl-imidazo[1,2-a]pyridine-6-carboxamide ; A1IQT # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 ASP n 1 3 TYR n 1 4 LYS n 1 5 ASP n 1 6 ASP n 1 7 ASP n 1 8 ASP n 1 9 LYS n 1 10 SER n 1 11 ALA n 1 12 VAL n 1 13 ASP n 1 14 GLU n 1 15 ASN n 1 16 LEU n 1 17 TYR n 1 18 PHE n 1 19 GLN n 1 20 GLY n 1 21 GLY n 1 22 GLY n 1 23 ARG n 1 24 GLY n 1 25 GLY n 1 26 SER n 1 27 ALA n 1 28 HIS n 1 29 ILE n 1 30 VAL n 1 31 MET n 1 32 VAL n 1 33 ASP n 1 34 ALA n 1 35 TYR n 1 36 LYS n 1 37 PRO n 1 38 THR n 1 39 LYS n 1 40 GLY n 1 41 GLY n 1 42 SER n 1 43 GLY n 1 44 MET n 1 45 ALA n 1 46 GLY n 1 47 GLU n 1 48 GLY n 1 49 ASP n 1 50 GLN n 1 51 GLN n 1 52 ASP n 1 53 ALA n 1 54 ALA n 1 55 HIS n 1 56 ASN n 1 57 MET n 1 58 GLY n 1 59 ASN n 1 60 HIS n 1 61 LEU n 1 62 PRO n 1 63 LEU n 1 64 LEU n 1 65 PRO n 1 66 ALA n 1 67 GLU n 1 68 SER n 1 69 GLU n 1 70 GLU n 1 71 GLU n 1 72 ASP n 1 73 GLU n 1 74 MET n 1 75 GLU n 1 76 VAL n 1 77 GLU n 1 78 ASP n 1 79 GLN n 1 80 ASP n 1 81 SER n 1 82 LYS n 1 83 GLU n 1 84 ALA n 1 85 LYS n 1 86 LYS n 1 87 PRO n 1 88 ASN n 1 89 ILE n 1 90 ILE n 1 91 ASN n 1 92 PHE n 1 93 ASP n 1 94 THR n 1 95 SER n 1 96 LEU n 1 97 PRO n 1 98 THR n 1 99 SER n 1 100 HIS n 1 101 THR n 1 102 TYR n 1 103 LEU n 1 104 GLY n 1 105 ALA n 1 106 ASP n 1 107 MET n 1 108 GLU n 1 109 GLU n 1 110 PHE n 1 111 HIS n 1 112 GLY n 1 113 ARG n 1 114 THR n 1 115 LEU n 1 116 HIS n 1 117 ASP n 1 118 ASP n 1 119 ASP n 1 120 SER n 1 121 CYS n 1 122 GLN n 1 123 VAL n 1 124 ILE n 1 125 PRO n 1 126 VAL n 1 127 LEU n 1 128 PRO n 1 129 GLN n 1 130 VAL n 1 131 MET n 1 132 MET n 1 133 ILE n 1 134 LEU n 1 135 ILE n 1 136 PRO n 1 137 GLY n 1 138 GLN n 1 139 THR n 1 140 LEU n 1 141 PRO n 1 142 LEU n 1 143 GLN n 1 144 LEU n 1 145 PHE n 1 146 HIS n 1 147 PRO n 1 148 GLN n 1 149 GLU n 1 150 VAL n 1 151 SER n 1 152 MET n 1 153 VAL n 1 154 ARG n 1 155 ASN n 1 156 LEU n 1 157 ILE n 1 158 GLN n 1 159 LYS n 1 160 ASP n 1 161 ARG n 1 162 THR n 1 163 PHE n 1 164 ALA n 1 165 VAL n 1 166 LEU n 1 167 ALA n 1 168 TYR n 1 169 SER n 1 170 ASN n 1 171 VAL n 1 172 GLN n 1 173 GLU n 1 174 ARG n 1 175 GLU n 1 176 ALA n 1 177 GLN n 1 178 PHE n 1 179 GLY n 1 180 THR n 1 181 THR n 1 182 ALA n 1 183 GLU n 1 184 ILE n 1 185 TYR n 1 186 ALA n 1 187 TYR n 1 188 ARG n 1 189 GLU n 1 190 GLU n 1 191 GLN n 1 192 ASP n 1 193 PHE n 1 194 GLY n 1 195 ILE n 1 196 GLU n 1 197 ILE n 1 198 VAL n 1 199 LYS n 1 200 VAL n 1 201 LYS n 1 202 ALA n 1 203 ILE n 1 204 GLY n 1 205 ARG n 1 206 GLN n 1 207 ARG n 1 208 PHE n 1 209 LYS n 1 210 VAL n 1 211 LEU n 1 212 GLU n 1 213 LEU n 1 214 ARG n 1 215 THR n 1 216 GLN n 1 217 SER n 1 218 ASP n 1 219 GLY n 1 220 ILE n 1 221 GLN n 1 222 GLN n 1 223 ALA n 1 224 LYS n 1 225 VAL n 1 226 GLN n 1 227 ILE n 1 228 LEU n 1 229 PRO n 1 230 GLU n 1 231 CYS n 1 232 VAL n 1 233 LEU n 1 234 PRO n 1 235 SER n 1 236 THR n 1 237 MET n 1 238 SER n 1 239 ALA n 1 240 VAL n 1 241 GLN n 1 242 LEU n 1 243 GLU n 1 244 SER n 1 245 LEU n 1 246 ASN n 1 247 LYS n 1 248 CYS n 1 249 GLN n 1 250 ILE n 1 251 PHE n 1 252 PRO n 1 253 SER n 1 254 LYS n 1 255 PRO n 1 256 VAL n 1 257 SER n 1 258 ARG n 1 259 GLU n 1 260 ASP n 1 261 GLN n 1 262 CYS n 1 263 SER n 1 264 TYR n 1 265 LYS n 1 266 TRP n 1 267 TRP n 1 268 GLN n 1 269 LYS n 1 270 TYR n 1 271 GLN n 1 272 LYS n 1 273 ARG n 1 274 LYS n 1 275 PHE n 1 276 HIS n 1 277 CYS n 1 278 ALA n 1 279 ASN n 1 280 LEU n 1 281 THR n 1 282 SER n 1 283 TRP n 1 284 PRO n 1 285 ARG n 1 286 TRP n 1 287 LEU n 1 288 TYR n 1 289 SER n 1 290 LEU n 1 291 TYR n 1 292 ASP n 1 293 ALA n 1 294 GLU n 1 295 THR n 1 296 LEU n 1 297 MET n 1 298 ASP n 1 299 ARG n 1 300 ILE n 1 301 LYS n 1 302 LYS n 1 303 GLN n 1 304 LEU n 1 305 ARG n 1 306 GLU n 1 307 TRP n 1 308 ASP n 1 309 GLU n 1 310 ASN n 1 311 LEU n 1 312 LYS n 1 313 ASP n 1 314 ASP n 1 315 SER n 1 316 LEU n 1 317 PRO n 1 318 SER n 1 319 ASN n 1 320 PRO n 1 321 ILE n 1 322 ASP n 1 323 PHE n 1 324 SER n 1 325 TYR n 1 326 ARG n 1 327 VAL n 1 328 ALA n 1 329 ALA n 1 330 CYS n 1 331 LEU n 1 332 PRO n 1 333 ILE n 1 334 ASP n 1 335 ASP n 1 336 VAL n 1 337 LEU n 1 338 ARG n 1 339 ILE n 1 340 GLN n 1 341 LEU n 1 342 LEU n 1 343 LYS n 1 344 ILE n 1 345 GLY n 1 346 SER n 1 347 ALA n 1 348 ILE n 1 349 GLN n 1 350 ARG n 1 351 LEU n 1 352 ARG n 1 353 CYS n 1 354 GLU n 1 355 LEU n 1 356 ASP n 1 357 ILE n 1 358 MET n 1 359 ASN n 1 360 LYS n 1 361 CYS n 1 362 THR n 1 363 SER n 1 364 LEU n 1 365 CYS n 1 366 CYS n 1 367 LYS n 1 368 GLN n 1 369 CYS n 1 370 GLN n 1 371 GLU n 1 372 THR n 1 373 GLU n 1 374 ILE n 1 375 THR n 1 376 THR n 1 377 LYS n 1 378 ASN n 1 379 GLU n 1 380 ILE n 1 381 PHE n 1 382 SER n 1 383 LEU n 1 384 SER n 1 385 LEU n 1 386 CYS n 1 387 GLY n 1 388 PRO n 1 389 MET n 1 390 ALA n 1 391 ALA n 1 392 TYR n 1 393 VAL n 1 394 ASN n 1 395 PRO n 1 396 HIS n 1 397 GLY n 1 398 TYR n 1 399 VAL n 1 400 HIS n 1 401 GLU n 1 402 THR n 1 403 LEU n 1 404 THR n 1 405 VAL n 1 406 TYR n 1 407 LYS n 1 408 ALA n 1 409 CYS n 1 410 ASN n 1 411 LEU n 1 412 ASN n 1 413 LEU n 1 414 ILE n 1 415 GLY n 1 416 ARG n 1 417 PRO n 1 418 SER n 1 419 THR n 1 420 GLU n 1 421 HIS n 1 422 SER n 1 423 TRP n 1 424 PHE n 1 425 PRO n 1 426 GLY n 1 427 TYR n 1 428 ALA n 1 429 TRP n 1 430 THR n 1 431 VAL n 1 432 ALA n 1 433 GLN n 1 434 CYS n 1 435 LYS n 1 436 ILE n 1 437 CYS n 1 438 ALA n 1 439 SER n 1 440 HIS n 1 441 ILE n 1 442 GLY n 1 443 TRP n 1 444 LYS n 1 445 PHE n 1 446 THR n 1 447 ALA n 1 448 THR n 1 449 LYS n 1 450 LYS n 1 451 ASP n 1 452 MET n 1 453 SER n 1 454 PRO n 1 455 GLN n 1 456 LYS n 1 457 PHE n 1 458 TRP n 1 459 GLY n 1 460 LEU n 1 461 THR n 1 462 ARG n 1 463 SER n 1 464 ALA n 1 465 LEU n 1 466 LEU n 1 467 PRO n 1 468 THR n 1 469 ILE n 1 470 PRO n 1 471 ASP n 1 472 THR n 1 473 GLU n 1 474 ASP n 1 475 GLU n 1 476 ILE n 1 477 SER n 1 478 PRO n 1 479 ASP n 1 480 LYS n 1 481 VAL n 1 482 ILE n 1 483 LEU n 1 484 CYS n 1 485 LEU n 2 1 MET n 2 2 ASP n 2 3 ASN n 2 4 GLN n 2 5 CYS n 2 6 THR n 2 7 VAL n 2 8 GLN n 2 9 VAL n 2 10 ARG n 2 11 LEU n 2 12 GLU n 2 13 LEU n 2 14 GLY n 2 15 HIS n 2 16 ARG n 2 17 ALA n 2 18 GLN n 2 19 LEU n 2 20 ARG n 2 21 LYS n 2 22 LYS n 2 23 PRO n 2 24 THR n 2 25 THR n 2 26 GLU n 2 27 GLY n 2 28 PHE n 2 29 THR n 2 30 HIS n 2 31 ASP n 2 32 TRP n 2 33 MET n 2 34 VAL n 2 35 PHE n 2 36 VAL n 2 37 ARG n 2 38 GLY n 2 39 PRO n 2 40 GLU n 2 41 GLN n 2 42 CYS n 2 43 ASP n 2 44 ILE n 2 45 GLN n 2 46 HIS n 2 47 PHE n 2 48 VAL n 2 49 GLU n 2 50 LYS n 2 51 VAL n 2 52 VAL n 2 53 PHE n 2 54 TRP n 2 55 LEU n 2 56 HIS n 2 57 ASP n 2 58 SER n 2 59 PHE n 2 60 PRO n 2 61 LYS n 2 62 PRO n 2 63 ARG n 2 64 ARG n 2 65 VAL n 2 66 CYS n 2 67 LYS n 2 68 GLU n 2 69 PRO n 2 70 PRO n 2 71 TYR n 2 72 LYS n 2 73 VAL n 2 74 GLU n 2 75 GLU n 2 76 SER n 2 77 GLY n 2 78 TYR n 2 79 ALA n 2 80 GLY n 2 81 PHE n 2 82 ILE n 2 83 MET n 2 84 PRO n 2 85 ILE n 2 86 GLU n 2 87 VAL n 2 88 HIS n 2 89 PHE n 2 90 LYS n 2 91 ASN n 2 92 LYS n 2 93 GLU n 2 94 GLU n 2 95 PRO n 2 96 ARG n 2 97 LYS n 2 98 VAL n 2 99 CYS n 2 100 PHE n 2 101 THR n 2 102 TYR n 2 103 ASP n 2 104 LEU n 2 105 PHE n 2 106 LEU n 2 107 ASN n 2 108 LEU n 2 109 GLU n 2 110 GLY n 2 111 ASN n 2 112 PRO n 2 113 PRO n 2 114 VAL n 2 115 ASN n 2 116 HIS n 2 117 LEU n 2 118 ARG n 2 119 CYS n 2 120 GLU n 2 121 LYS n 2 122 LEU n 2 123 THR n 2 124 PHE n 2 125 ASN n 2 126 ASN n 2 127 PRO n 2 128 THR n 2 129 THR n 2 130 GLU n 2 131 PHE n 2 132 ARG n 2 133 TYR n 2 134 LYS n 2 135 LEU n 2 136 LEU n 2 137 ARG n 2 138 ALA n 2 139 GLY n 2 140 GLY n 2 141 VAL n 2 142 MET n 2 143 VAL n 2 144 MET n 2 145 PRO n 2 146 GLU n 2 147 GLY n 2 148 ALA n 2 149 HIS n 2 150 HIS n 2 151 HIS n 2 152 HIS n 2 153 HIS n 2 154 HIS n # loop_ _entity_src_gen.entity_id _entity_src_gen.pdbx_src_id _entity_src_gen.pdbx_alt_source_flag _entity_src_gen.pdbx_seq_type _entity_src_gen.pdbx_beg_seq_num _entity_src_gen.pdbx_end_seq_num _entity_src_gen.gene_src_common_name _entity_src_gen.gene_src_genus _entity_src_gen.pdbx_gene_src_gene _entity_src_gen.gene_src_species _entity_src_gen.gene_src_strain _entity_src_gen.gene_src_tissue _entity_src_gen.gene_src_tissue_fraction _entity_src_gen.gene_src_details _entity_src_gen.pdbx_gene_src_fragment _entity_src_gen.pdbx_gene_src_scientific_name _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id _entity_src_gen.pdbx_gene_src_variant _entity_src_gen.pdbx_gene_src_cell_line _entity_src_gen.pdbx_gene_src_atcc _entity_src_gen.pdbx_gene_src_organ _entity_src_gen.pdbx_gene_src_organelle _entity_src_gen.pdbx_gene_src_cell _entity_src_gen.pdbx_gene_src_cellular_location _entity_src_gen.host_org_common_name _entity_src_gen.pdbx_host_org_scientific_name _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id _entity_src_gen.host_org_genus _entity_src_gen.pdbx_host_org_gene _entity_src_gen.pdbx_host_org_organ _entity_src_gen.host_org_species _entity_src_gen.pdbx_host_org_tissue _entity_src_gen.pdbx_host_org_tissue_fraction _entity_src_gen.pdbx_host_org_strain _entity_src_gen.pdbx_host_org_variant _entity_src_gen.pdbx_host_org_cell_line _entity_src_gen.pdbx_host_org_atcc _entity_src_gen.pdbx_host_org_culture_collection _entity_src_gen.pdbx_host_org_cell _entity_src_gen.pdbx_host_org_organelle _entity_src_gen.pdbx_host_org_cellular_location _entity_src_gen.pdbx_host_org_vector_type _entity_src_gen.pdbx_host_org_vector _entity_src_gen.host_org_details _entity_src_gen.expression_system_id _entity_src_gen.plasmid_name _entity_src_gen.plasmid_details _entity_src_gen.pdbx_description 1 1 sample 'Biological sequence' 1 485 human ? CRBN ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? 'Trichoplusia ni' 7111 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 2 1 sample 'Biological sequence' 1 154 human ? 'MLLT1, ENL, LTG19, YEATS1' ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? 'Escherichia coli B' 37762 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight A1IQT non-polymer . ;2-[3-[2-[4-[[(5~{S})-1,3-bis(oxidanylidene)-2,7-diazaspiro[4.4]nonan-7-yl]sulfonylamino]piperidin-1-yl]ethylcarbamoyl]phenyl]-~{N}-cyclobutyl-imidazo[1,2-a]pyridine-6-carboxamide ; ? 'C33 H40 N8 O6 S' 676.786 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 ZN non-polymer . 'ZINC ION' ? 'Zn 2' 65.409 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 -42 ? ? ? B . n A 1 2 ASP 2 -41 ? ? ? B . n A 1 3 TYR 3 -40 ? ? ? B . n A 1 4 LYS 4 -39 ? ? ? B . n A 1 5 ASP 5 -38 ? ? ? B . n A 1 6 ASP 6 -37 ? ? ? B . n A 1 7 ASP 7 -36 ? ? ? B . n A 1 8 ASP 8 -35 ? ? ? B . n A 1 9 LYS 9 -34 ? ? ? B . n A 1 10 SER 10 -33 ? ? ? B . n A 1 11 ALA 11 -32 ? ? ? B . n A 1 12 VAL 12 -31 ? ? ? B . n A 1 13 ASP 13 -30 ? ? ? B . n A 1 14 GLU 14 -29 ? ? ? B . n A 1 15 ASN 15 -28 ? ? ? B . n A 1 16 LEU 16 -27 ? ? ? B . n A 1 17 TYR 17 -26 ? ? ? B . n A 1 18 PHE 18 -25 ? ? ? B . n A 1 19 GLN 19 -24 ? ? ? B . n A 1 20 GLY 20 -23 ? ? ? B . n A 1 21 GLY 21 -22 ? ? ? B . n A 1 22 GLY 22 -21 ? ? ? B . n A 1 23 ARG 23 -20 ? ? ? B . n A 1 24 GLY 24 -19 ? ? ? B . n A 1 25 GLY 25 -18 ? ? ? B . n A 1 26 SER 26 -17 ? ? ? B . n A 1 27 ALA 27 -16 ? ? ? B . n A 1 28 HIS 28 -15 ? ? ? B . n A 1 29 ILE 29 -14 ? ? ? B . n A 1 30 VAL 30 -13 ? ? ? B . n A 1 31 MET 31 -12 ? ? ? B . n A 1 32 VAL 32 -11 ? ? ? B . n A 1 33 ASP 33 -10 ? ? ? B . n A 1 34 ALA 34 -9 ? ? ? B . n A 1 35 TYR 35 -8 ? ? ? B . n A 1 36 LYS 36 -7 ? ? ? B . n A 1 37 PRO 37 -6 ? ? ? B . n A 1 38 THR 38 -5 ? ? ? B . n A 1 39 LYS 39 -4 ? ? ? B . n A 1 40 GLY 40 -3 ? ? ? B . n A 1 41 GLY 41 -2 ? ? ? B . n A 1 42 SER 42 -1 ? ? ? B . n A 1 43 GLY 43 0 ? ? ? B . n A 1 44 MET 44 1 ? ? ? B . n A 1 45 ALA 45 2 ? ? ? B . n A 1 46 GLY 46 3 ? ? ? B . n A 1 47 GLU 47 4 ? ? ? B . n A 1 48 GLY 48 5 ? ? ? B . n A 1 49 ASP 49 6 ? ? ? B . n A 1 50 GLN 50 7 ? ? ? B . n A 1 51 GLN 51 8 ? ? ? B . n A 1 52 ASP 52 9 ? ? ? B . n A 1 53 ALA 53 10 ? ? ? B . n A 1 54 ALA 54 11 ? ? ? B . n A 1 55 HIS 55 12 ? ? ? B . n A 1 56 ASN 56 13 ? ? ? B . n A 1 57 MET 57 14 ? ? ? B . n A 1 58 GLY 58 15 ? ? ? B . n A 1 59 ASN 59 16 ? ? ? B . n A 1 60 HIS 60 17 ? ? ? B . n A 1 61 LEU 61 18 ? ? ? B . n A 1 62 PRO 62 19 ? ? ? B . n A 1 63 LEU 63 20 ? ? ? B . n A 1 64 LEU 64 21 ? ? ? B . n A 1 65 PRO 65 22 ? ? ? B . n A 1 66 ALA 66 23 ? ? ? B . n A 1 67 GLU 67 24 ? ? ? B . n A 1 68 SER 68 25 ? ? ? B . n A 1 69 GLU 69 26 ? ? ? B . n A 1 70 GLU 70 27 ? ? ? B . n A 1 71 GLU 71 28 ? ? ? B . n A 1 72 ASP 72 29 ? ? ? B . n A 1 73 GLU 73 30 ? ? ? B . n A 1 74 MET 74 31 ? ? ? B . n A 1 75 GLU 75 32 ? ? ? B . n A 1 76 VAL 76 33 ? ? ? B . n A 1 77 GLU 77 34 ? ? ? B . n A 1 78 ASP 78 35 ? ? ? B . n A 1 79 GLN 79 36 ? ? ? B . n A 1 80 ASP 80 37 ? ? ? B . n A 1 81 SER 81 38 ? ? ? B . n A 1 82 LYS 82 39 ? ? ? B . n A 1 83 GLU 83 40 ? ? ? B . n A 1 84 ALA 84 41 ? ? ? B . n A 1 85 LYS 85 42 ? ? ? B . n A 1 86 LYS 86 43 ? ? ? B . n A 1 87 PRO 87 44 ? ? ? B . n A 1 88 ASN 88 45 ? ? ? B . n A 1 89 ILE 89 46 ? ? ? B . n A 1 90 ILE 90 47 ? ? ? B . n A 1 91 ASN 91 48 ? ? ? B . n A 1 92 PHE 92 49 ? ? ? B . n A 1 93 ASP 93 50 50 ASP ASP B . n A 1 94 THR 94 51 51 THR THR B . n A 1 95 SER 95 52 52 SER SER B . n A 1 96 LEU 96 53 53 LEU LEU B . n A 1 97 PRO 97 54 54 PRO PRO B . n A 1 98 THR 98 55 55 THR THR B . n A 1 99 SER 99 56 56 SER SER B . n A 1 100 HIS 100 57 57 HIS HIS B . n A 1 101 THR 101 58 58 THR THR B . n A 1 102 TYR 102 59 59 TYR TYR B . n A 1 103 LEU 103 60 60 LEU LEU B . n A 1 104 GLY 104 61 61 GLY GLY B . n A 1 105 ALA 105 62 62 ALA ALA B . n A 1 106 ASP 106 63 63 ASP ASP B . n A 1 107 MET 107 64 64 MET MET B . n A 1 108 GLU 108 65 65 GLU GLU B . n A 1 109 GLU 109 66 66 GLU GLU B . n A 1 110 PHE 110 67 67 PHE PHE B . n A 1 111 HIS 111 68 68 HIS HIS B . n A 1 112 GLY 112 69 69 GLY GLY B . n A 1 113 ARG 113 70 70 ARG ARG B . n A 1 114 THR 114 71 71 THR THR B . n A 1 115 LEU 115 72 72 LEU LEU B . n A 1 116 HIS 116 73 73 HIS HIS B . n A 1 117 ASP 117 74 74 ASP ASP B . n A 1 118 ASP 118 75 75 ASP ASP B . n A 1 119 ASP 119 76 76 ASP ASP B . n A 1 120 SER 120 77 77 SER SER B . n A 1 121 CYS 121 78 78 CYS CYS B . n A 1 122 GLN 122 79 79 GLN GLN B . n A 1 123 VAL 123 80 80 VAL VAL B . n A 1 124 ILE 124 81 81 ILE ILE B . n A 1 125 PRO 125 82 82 PRO PRO B . n A 1 126 VAL 126 83 83 VAL VAL B . n A 1 127 LEU 127 84 84 LEU LEU B . n A 1 128 PRO 128 85 85 PRO PRO B . n A 1 129 GLN 129 86 86 GLN GLN B . n A 1 130 VAL 130 87 87 VAL VAL B . n A 1 131 MET 131 88 88 MET MET B . n A 1 132 MET 132 89 89 MET MET B . n A 1 133 ILE 133 90 90 ILE ILE B . n A 1 134 LEU 134 91 91 LEU LEU B . n A 1 135 ILE 135 92 92 ILE ILE B . n A 1 136 PRO 136 93 93 PRO PRO B . n A 1 137 GLY 137 94 94 GLY GLY B . n A 1 138 GLN 138 95 95 GLN GLN B . n A 1 139 THR 139 96 96 THR THR B . n A 1 140 LEU 140 97 97 LEU LEU B . n A 1 141 PRO 141 98 98 PRO PRO B . n A 1 142 LEU 142 99 99 LEU LEU B . n A 1 143 GLN 143 100 100 GLN GLN B . n A 1 144 LEU 144 101 101 LEU LEU B . n A 1 145 PHE 145 102 102 PHE PHE B . n A 1 146 HIS 146 103 103 HIS HIS B . n A 1 147 PRO 147 104 104 PRO PRO B . n A 1 148 GLN 148 105 105 GLN GLN B . n A 1 149 GLU 149 106 106 GLU GLU B . n A 1 150 VAL 150 107 107 VAL VAL B . n A 1 151 SER 151 108 108 SER SER B . n A 1 152 MET 152 109 109 MET MET B . n A 1 153 VAL 153 110 110 VAL VAL B . n A 1 154 ARG 154 111 111 ARG ARG B . n A 1 155 ASN 155 112 112 ASN ASN B . n A 1 156 LEU 156 113 113 LEU LEU B . n A 1 157 ILE 157 114 114 ILE ILE B . n A 1 158 GLN 158 115 115 GLN GLN B . n A 1 159 LYS 159 116 116 LYS LYS B . n A 1 160 ASP 160 117 117 ASP ASP B . n A 1 161 ARG 161 118 118 ARG ARG B . n A 1 162 THR 162 119 119 THR THR B . n A 1 163 PHE 163 120 120 PHE PHE B . n A 1 164 ALA 164 121 121 ALA ALA B . n A 1 165 VAL 165 122 122 VAL VAL B . n A 1 166 LEU 166 123 123 LEU LEU B . n A 1 167 ALA 167 124 124 ALA ALA B . n A 1 168 TYR 168 125 125 TYR TYR B . n A 1 169 SER 169 126 ? ? ? B . n A 1 170 ASN 170 127 ? ? ? B . n A 1 171 VAL 171 128 ? ? ? B . n A 1 172 GLN 172 129 ? ? ? B . n A 1 173 GLU 173 130 ? ? ? B . n A 1 174 ARG 174 131 ? ? ? B . n A 1 175 GLU 175 132 ? ? ? B . n A 1 176 ALA 176 133 133 ALA ALA B . n A 1 177 GLN 177 134 134 GLN GLN B . n A 1 178 PHE 178 135 135 PHE PHE B . n A 1 179 GLY 179 136 136 GLY GLY B . n A 1 180 THR 180 137 137 THR THR B . n A 1 181 THR 181 138 138 THR THR B . n A 1 182 ALA 182 139 139 ALA ALA B . n A 1 183 GLU 183 140 140 GLU GLU B . n A 1 184 ILE 184 141 141 ILE ILE B . n A 1 185 TYR 185 142 142 TYR TYR B . n A 1 186 ALA 186 143 143 ALA ALA B . n A 1 187 TYR 187 144 144 TYR TYR B . n A 1 188 ARG 188 145 145 ARG ARG B . n A 1 189 GLU 189 146 146 GLU GLU B . n A 1 190 GLU 190 147 147 GLU GLU B . n A 1 191 GLN 191 148 148 GLN GLN B . n A 1 192 ASP 192 149 149 ASP ASP B . n A 1 193 PHE 193 150 150 PHE PHE B . n A 1 194 GLY 194 151 151 GLY GLY B . n A 1 195 ILE 195 152 152 ILE ILE B . n A 1 196 GLU 196 153 153 GLU GLU B . n A 1 197 ILE 197 154 154 ILE ILE B . n A 1 198 VAL 198 155 155 VAL VAL B . n A 1 199 LYS 199 156 156 LYS LYS B . n A 1 200 VAL 200 157 157 VAL VAL B . n A 1 201 LYS 201 158 158 LYS LYS B . n A 1 202 ALA 202 159 159 ALA ALA B . n A 1 203 ILE 203 160 160 ILE ILE B . n A 1 204 GLY 204 161 161 GLY GLY B . n A 1 205 ARG 205 162 162 ARG ARG B . n A 1 206 GLN 206 163 163 GLN GLN B . n A 1 207 ARG 207 164 164 ARG ARG B . n A 1 208 PHE 208 165 165 PHE PHE B . n A 1 209 LYS 209 166 166 LYS LYS B . n A 1 210 VAL 210 167 167 VAL VAL B . n A 1 211 LEU 211 168 168 LEU LEU B . n A 1 212 GLU 212 169 169 GLU GLU B . n A 1 213 LEU 213 170 170 LEU LEU B . n A 1 214 ARG 214 171 171 ARG ARG B . n A 1 215 THR 215 172 172 THR THR B . n A 1 216 GLN 216 173 173 GLN GLN B . n A 1 217 SER 217 174 174 SER SER B . n A 1 218 ASP 218 175 175 ASP ASP B . n A 1 219 GLY 219 176 176 GLY GLY B . n A 1 220 ILE 220 177 177 ILE ILE B . n A 1 221 GLN 221 178 178 GLN GLN B . n A 1 222 GLN 222 179 179 GLN GLN B . n A 1 223 ALA 223 180 180 ALA ALA B . n A 1 224 LYS 224 181 181 LYS LYS B . n A 1 225 VAL 225 182 182 VAL VAL B . n A 1 226 GLN 226 183 183 GLN GLN B . n A 1 227 ILE 227 184 184 ILE ILE B . n A 1 228 LEU 228 185 185 LEU LEU B . n A 1 229 PRO 229 186 186 PRO PRO B . n A 1 230 GLU 230 187 187 GLU GLU B . n A 1 231 CYS 231 188 188 CYS CYS B . n A 1 232 VAL 232 189 189 VAL VAL B . n A 1 233 LEU 233 190 190 LEU LEU B . n A 1 234 PRO 234 191 191 PRO PRO B . n A 1 235 SER 235 192 192 SER SER B . n A 1 236 THR 236 193 193 THR THR B . n A 1 237 MET 237 194 194 MET MET B . n A 1 238 SER 238 195 195 SER SER B . n A 1 239 ALA 239 196 196 ALA ALA B . n A 1 240 VAL 240 197 197 VAL VAL B . n A 1 241 GLN 241 198 198 GLN GLN B . n A 1 242 LEU 242 199 199 LEU LEU B . n A 1 243 GLU 243 200 200 GLU GLU B . n A 1 244 SER 244 201 201 SER SER B . n A 1 245 LEU 245 202 202 LEU LEU B . n A 1 246 ASN 246 203 203 ASN ASN B . n A 1 247 LYS 247 204 204 LYS LYS B . n A 1 248 CYS 248 205 205 CYS CYS B . n A 1 249 GLN 249 206 206 GLN GLN B . n A 1 250 ILE 250 207 207 ILE ILE B . n A 1 251 PHE 251 208 208 PHE PHE B . n A 1 252 PRO 252 209 209 PRO PRO B . n A 1 253 SER 253 210 210 SER SER B . n A 1 254 LYS 254 211 211 LYS LYS B . n A 1 255 PRO 255 212 212 PRO PRO B . n A 1 256 VAL 256 213 ? ? ? B . n A 1 257 SER 257 214 ? ? ? B . n A 1 258 ARG 258 215 ? ? ? B . n A 1 259 GLU 259 216 ? ? ? B . n A 1 260 ASP 260 217 217 ASP ASP B . n A 1 261 GLN 261 218 218 GLN GLN B . n A 1 262 CYS 262 219 219 CYS CYS B . n A 1 263 SER 263 220 220 SER SER B . n A 1 264 TYR 264 221 221 TYR TYR B . n A 1 265 LYS 265 222 222 LYS LYS B . n A 1 266 TRP 266 223 223 TRP TRP B . n A 1 267 TRP 267 224 224 TRP TRP B . n A 1 268 GLN 268 225 225 GLN GLN B . n A 1 269 LYS 269 226 226 LYS LYS B . n A 1 270 TYR 270 227 227 TYR TYR B . n A 1 271 GLN 271 228 228 GLN GLN B . n A 1 272 LYS 272 229 229 LYS LYS B . n A 1 273 ARG 273 230 230 ARG ARG B . n A 1 274 LYS 274 231 231 LYS LYS B . n A 1 275 PHE 275 232 232 PHE PHE B . n A 1 276 HIS 276 233 233 HIS HIS B . n A 1 277 CYS 277 234 234 CYS CYS B . n A 1 278 ALA 278 235 235 ALA ALA B . n A 1 279 ASN 279 236 236 ASN ASN B . n A 1 280 LEU 280 237 237 LEU LEU B . n A 1 281 THR 281 238 238 THR THR B . n A 1 282 SER 282 239 239 SER SER B . n A 1 283 TRP 283 240 240 TRP TRP B . n A 1 284 PRO 284 241 241 PRO PRO B . n A 1 285 ARG 285 242 242 ARG ARG B . n A 1 286 TRP 286 243 243 TRP TRP B . n A 1 287 LEU 287 244 244 LEU LEU B . n A 1 288 TYR 288 245 245 TYR TYR B . n A 1 289 SER 289 246 246 SER SER B . n A 1 290 LEU 290 247 247 LEU LEU B . n A 1 291 TYR 291 248 248 TYR TYR B . n A 1 292 ASP 292 249 249 ASP ASP B . n A 1 293 ALA 293 250 250 ALA ALA B . n A 1 294 GLU 294 251 251 GLU GLU B . n A 1 295 THR 295 252 252 THR THR B . n A 1 296 LEU 296 253 253 LEU LEU B . n A 1 297 MET 297 254 254 MET MET B . n A 1 298 ASP 298 255 255 ASP ASP B . n A 1 299 ARG 299 256 256 ARG ARG B . n A 1 300 ILE 300 257 257 ILE ILE B . n A 1 301 LYS 301 258 258 LYS LYS B . n A 1 302 LYS 302 259 259 LYS LYS B . n A 1 303 GLN 303 260 260 GLN GLN B . n A 1 304 LEU 304 261 261 LEU LEU B . n A 1 305 ARG 305 262 262 ARG ARG B . n A 1 306 GLU 306 263 263 GLU GLU B . n A 1 307 TRP 307 264 264 TRP TRP B . n A 1 308 ASP 308 265 265 ASP ASP B . n A 1 309 GLU 309 266 266 GLU GLU B . n A 1 310 ASN 310 267 267 ASN ASN B . n A 1 311 LEU 311 268 268 LEU LEU B . n A 1 312 LYS 312 269 269 LYS LYS B . n A 1 313 ASP 313 270 270 ASP ASP B . n A 1 314 ASP 314 271 271 ASP ASP B . n A 1 315 SER 315 272 272 SER SER B . n A 1 316 LEU 316 273 273 LEU LEU B . n A 1 317 PRO 317 274 274 PRO PRO B . n A 1 318 SER 318 275 275 SER SER B . n A 1 319 ASN 319 276 276 ASN ASN B . n A 1 320 PRO 320 277 277 PRO PRO B . n A 1 321 ILE 321 278 278 ILE ILE B . n A 1 322 ASP 322 279 279 ASP ASP B . n A 1 323 PHE 323 280 280 PHE PHE B . n A 1 324 SER 324 281 281 SER SER B . n A 1 325 TYR 325 282 282 TYR TYR B . n A 1 326 ARG 326 283 283 ARG ARG B . n A 1 327 VAL 327 284 284 VAL VAL B . n A 1 328 ALA 328 285 285 ALA ALA B . n A 1 329 ALA 329 286 286 ALA ALA B . n A 1 330 CYS 330 287 287 CYS CYS B . n A 1 331 LEU 331 288 288 LEU LEU B . n A 1 332 PRO 332 289 289 PRO PRO B . n A 1 333 ILE 333 290 290 ILE ILE B . n A 1 334 ASP 334 291 291 ASP ASP B . n A 1 335 ASP 335 292 292 ASP ASP B . n A 1 336 VAL 336 293 293 VAL VAL B . n A 1 337 LEU 337 294 294 LEU LEU B . n A 1 338 ARG 338 295 295 ARG ARG B . n A 1 339 ILE 339 296 296 ILE ILE B . n A 1 340 GLN 340 297 297 GLN GLN B . n A 1 341 LEU 341 298 298 LEU LEU B . n A 1 342 LEU 342 299 299 LEU LEU B . n A 1 343 LYS 343 300 300 LYS LYS B . n A 1 344 ILE 344 301 301 ILE ILE B . n A 1 345 GLY 345 302 302 GLY GLY B . n A 1 346 SER 346 303 303 SER SER B . n A 1 347 ALA 347 304 304 ALA ALA B . n A 1 348 ILE 348 305 305 ILE ILE B . n A 1 349 GLN 349 306 306 GLN GLN B . n A 1 350 ARG 350 307 307 ARG ARG B . n A 1 351 LEU 351 308 308 LEU LEU B . n A 1 352 ARG 352 309 309 ARG ARG B . n A 1 353 CYS 353 310 310 CYS CYS B . n A 1 354 GLU 354 311 311 GLU GLU B . n A 1 355 LEU 355 312 312 LEU LEU B . n A 1 356 ASP 356 313 313 ASP ASP B . n A 1 357 ILE 357 314 314 ILE ILE B . n A 1 358 MET 358 315 315 MET MET B . n A 1 359 ASN 359 316 316 ASN ASN B . n A 1 360 LYS 360 317 317 LYS LYS B . n A 1 361 CYS 361 318 318 CYS CYS B . n A 1 362 THR 362 319 319 THR THR B . n A 1 363 SER 363 320 320 SER SER B . n A 1 364 LEU 364 321 321 LEU LEU B . n A 1 365 CYS 365 322 322 CYS CYS B . n A 1 366 CYS 366 323 323 CYS CYS B . n A 1 367 LYS 367 324 324 LYS LYS B . n A 1 368 GLN 368 325 325 GLN GLN B . n A 1 369 CYS 369 326 326 CYS CYS B . n A 1 370 GLN 370 327 327 GLN GLN B . n A 1 371 GLU 371 328 328 GLU GLU B . n A 1 372 THR 372 329 329 THR THR B . n A 1 373 GLU 373 330 330 GLU GLU B . n A 1 374 ILE 374 331 331 ILE ILE B . n A 1 375 THR 375 332 332 THR THR B . n A 1 376 THR 376 333 333 THR THR B . n A 1 377 LYS 377 334 334 LYS LYS B . n A 1 378 ASN 378 335 335 ASN ASN B . n A 1 379 GLU 379 336 336 GLU GLU B . n A 1 380 ILE 380 337 337 ILE ILE B . n A 1 381 PHE 381 338 338 PHE PHE B . n A 1 382 SER 382 339 339 SER SER B . n A 1 383 LEU 383 340 340 LEU LEU B . n A 1 384 SER 384 341 341 SER SER B . n A 1 385 LEU 385 342 342 LEU LEU B . n A 1 386 CYS 386 343 343 CYS CYS B . n A 1 387 GLY 387 344 344 GLY GLY B . n A 1 388 PRO 388 345 345 PRO PRO B . n A 1 389 MET 389 346 346 MET MET B . n A 1 390 ALA 390 347 347 ALA ALA B . n A 1 391 ALA 391 348 348 ALA ALA B . n A 1 392 TYR 392 349 349 TYR TYR B . n A 1 393 VAL 393 350 350 VAL VAL B . n A 1 394 ASN 394 351 351 ASN ASN B . n A 1 395 PRO 395 352 352 PRO PRO B . n A 1 396 HIS 396 353 353 HIS HIS B . n A 1 397 GLY 397 354 354 GLY GLY B . n A 1 398 TYR 398 355 355 TYR TYR B . n A 1 399 VAL 399 356 356 VAL VAL B . n A 1 400 HIS 400 357 357 HIS HIS B . n A 1 401 GLU 401 358 358 GLU GLU B . n A 1 402 THR 402 359 359 THR THR B . n A 1 403 LEU 403 360 360 LEU LEU B . n A 1 404 THR 404 361 361 THR THR B . n A 1 405 VAL 405 362 362 VAL VAL B . n A 1 406 TYR 406 363 363 TYR TYR B . n A 1 407 LYS 407 364 364 LYS LYS B . n A 1 408 ALA 408 365 365 ALA ALA B . n A 1 409 CYS 409 366 366 CYS CYS B . n A 1 410 ASN 410 367 367 ASN ASN B . n A 1 411 LEU 411 368 368 LEU LEU B . n A 1 412 ASN 412 369 369 ASN ASN B . n A 1 413 LEU 413 370 370 LEU LEU B . n A 1 414 ILE 414 371 371 ILE ILE B . n A 1 415 GLY 415 372 372 GLY GLY B . n A 1 416 ARG 416 373 373 ARG ARG B . n A 1 417 PRO 417 374 374 PRO PRO B . n A 1 418 SER 418 375 375 SER SER B . n A 1 419 THR 419 376 376 THR THR B . n A 1 420 GLU 420 377 377 GLU GLU B . n A 1 421 HIS 421 378 378 HIS HIS B . n A 1 422 SER 422 379 379 SER SER B . n A 1 423 TRP 423 380 380 TRP TRP B . n A 1 424 PHE 424 381 381 PHE PHE B . n A 1 425 PRO 425 382 382 PRO PRO B . n A 1 426 GLY 426 383 383 GLY GLY B . n A 1 427 TYR 427 384 384 TYR TYR B . n A 1 428 ALA 428 385 385 ALA ALA B . n A 1 429 TRP 429 386 386 TRP TRP B . n A 1 430 THR 430 387 387 THR THR B . n A 1 431 VAL 431 388 388 VAL VAL B . n A 1 432 ALA 432 389 389 ALA ALA B . n A 1 433 GLN 433 390 390 GLN GLN B . n A 1 434 CYS 434 391 391 CYS CYS B . n A 1 435 LYS 435 392 392 LYS LYS B . n A 1 436 ILE 436 393 393 ILE ILE B . n A 1 437 CYS 437 394 394 CYS CYS B . n A 1 438 ALA 438 395 395 ALA ALA B . n A 1 439 SER 439 396 396 SER SER B . n A 1 440 HIS 440 397 397 HIS HIS B . n A 1 441 ILE 441 398 398 ILE ILE B . n A 1 442 GLY 442 399 399 GLY GLY B . n A 1 443 TRP 443 400 400 TRP TRP B . n A 1 444 LYS 444 401 401 LYS LYS B . n A 1 445 PHE 445 402 402 PHE PHE B . n A 1 446 THR 446 403 403 THR THR B . n A 1 447 ALA 447 404 404 ALA ALA B . n A 1 448 THR 448 405 405 THR THR B . n A 1 449 LYS 449 406 406 LYS LYS B . n A 1 450 LYS 450 407 407 LYS LYS B . n A 1 451 ASP 451 408 408 ASP ASP B . n A 1 452 MET 452 409 409 MET MET B . n A 1 453 SER 453 410 410 SER SER B . n A 1 454 PRO 454 411 411 PRO PRO B . n A 1 455 GLN 455 412 412 GLN GLN B . n A 1 456 LYS 456 413 413 LYS LYS B . n A 1 457 PHE 457 414 414 PHE PHE B . n A 1 458 TRP 458 415 415 TRP TRP B . n A 1 459 GLY 459 416 416 GLY GLY B . n A 1 460 LEU 460 417 417 LEU LEU B . n A 1 461 THR 461 418 418 THR THR B . n A 1 462 ARG 462 419 419 ARG ARG B . n A 1 463 SER 463 420 420 SER SER B . n A 1 464 ALA 464 421 421 ALA ALA B . n A 1 465 LEU 465 422 422 LEU LEU B . n A 1 466 LEU 466 423 423 LEU LEU B . n A 1 467 PRO 467 424 424 PRO PRO B . n A 1 468 THR 468 425 425 THR THR B . n A 1 469 ILE 469 426 426 ILE ILE B . n A 1 470 PRO 470 427 ? ? ? B . n A 1 471 ASP 471 428 ? ? ? B . n A 1 472 THR 472 429 ? ? ? B . n A 1 473 GLU 473 430 ? ? ? B . n A 1 474 ASP 474 431 ? ? ? B . n A 1 475 GLU 475 432 ? ? ? B . n A 1 476 ILE 476 433 ? ? ? B . n A 1 477 SER 477 434 ? ? ? B . n A 1 478 PRO 478 435 ? ? ? B . n A 1 479 ASP 479 436 ? ? ? B . n A 1 480 LYS 480 437 ? ? ? B . n A 1 481 VAL 481 438 ? ? ? B . n A 1 482 ILE 482 439 ? ? ? B . n A 1 483 LEU 483 440 ? ? ? B . n A 1 484 CYS 484 441 ? ? ? B . n A 1 485 LEU 485 442 ? ? ? B . n B 2 1 MET 1 1 ? ? ? C . n B 2 2 ASP 2 2 ? ? ? C . n B 2 3 ASN 3 3 ? ? ? C . n B 2 4 GLN 4 4 ? ? ? C . n B 2 5 CYS 5 5 ? ? ? C . n B 2 6 THR 6 6 6 THR THR C . n B 2 7 VAL 7 7 7 VAL VAL C . n B 2 8 GLN 8 8 8 GLN GLN C . n B 2 9 VAL 9 9 9 VAL VAL C . n B 2 10 ARG 10 10 10 ARG ARG C . n B 2 11 LEU 11 11 11 LEU LEU C . n B 2 12 GLU 12 12 12 GLU GLU C . n B 2 13 LEU 13 13 13 LEU LEU C . n B 2 14 GLY 14 14 14 GLY GLY C . n B 2 15 HIS 15 15 15 HIS HIS C . n B 2 16 ARG 16 16 16 ARG ARG C . n B 2 17 ALA 17 17 17 ALA ALA C . n B 2 18 GLN 18 18 18 GLN GLN C . n B 2 19 LEU 19 19 19 LEU LEU C . n B 2 20 ARG 20 20 20 ARG ARG C . n B 2 21 LYS 21 21 21 LYS LYS C . n B 2 22 LYS 22 22 22 LYS LYS C . n B 2 23 PRO 23 23 23 PRO PRO C . n B 2 24 THR 24 24 24 THR THR C . n B 2 25 THR 25 25 25 THR THR C . n B 2 26 GLU 26 26 26 GLU GLU C . n B 2 27 GLY 27 27 27 GLY GLY C . n B 2 28 PHE 28 28 28 PHE PHE C . n B 2 29 THR 29 29 29 THR THR C . n B 2 30 HIS 30 30 30 HIS HIS C . n B 2 31 ASP 31 31 31 ASP ASP C . n B 2 32 TRP 32 32 32 TRP TRP C . n B 2 33 MET 33 33 33 MET MET C . n B 2 34 VAL 34 34 34 VAL VAL C . n B 2 35 PHE 35 35 35 PHE PHE C . n B 2 36 VAL 36 36 36 VAL VAL C . n B 2 37 ARG 37 37 37 ARG ARG C . n B 2 38 GLY 38 38 38 GLY GLY C . n B 2 39 PRO 39 39 39 PRO PRO C . n B 2 40 GLU 40 40 40 GLU GLU C . n B 2 41 GLN 41 41 41 GLN GLN C . n B 2 42 CYS 42 42 42 CYS CYS C . n B 2 43 ASP 43 43 43 ASP ASP C . n B 2 44 ILE 44 44 44 ILE ILE C . n B 2 45 GLN 45 45 45 GLN GLN C . n B 2 46 HIS 46 46 46 HIS HIS C . n B 2 47 PHE 47 47 47 PHE PHE C . n B 2 48 VAL 48 48 48 VAL VAL C . n B 2 49 GLU 49 49 49 GLU GLU C . n B 2 50 LYS 50 50 50 LYS LYS C . n B 2 51 VAL 51 51 51 VAL VAL C . n B 2 52 VAL 52 52 52 VAL VAL C . n B 2 53 PHE 53 53 53 PHE PHE C . n B 2 54 TRP 54 54 54 TRP TRP C . n B 2 55 LEU 55 55 55 LEU LEU C . n B 2 56 HIS 56 56 56 HIS HIS C . n B 2 57 ASP 57 57 57 ASP ASP C . n B 2 58 SER 58 58 58 SER SER C . n B 2 59 PHE 59 59 59 PHE PHE C . n B 2 60 PRO 60 60 60 PRO PRO C . n B 2 61 LYS 61 61 61 LYS LYS C . n B 2 62 PRO 62 62 62 PRO PRO C . n B 2 63 ARG 63 63 63 ARG ARG C . n B 2 64 ARG 64 64 64 ARG ARG C . n B 2 65 VAL 65 65 65 VAL VAL C . n B 2 66 CYS 66 66 66 CYS CYS C . n B 2 67 LYS 67 67 67 LYS LYS C . n B 2 68 GLU 68 68 68 GLU GLU C . n B 2 69 PRO 69 69 69 PRO PRO C . n B 2 70 PRO 70 70 70 PRO PRO C . n B 2 71 TYR 71 71 71 TYR TYR C . n B 2 72 LYS 72 72 72 LYS LYS C . n B 2 73 VAL 73 73 73 VAL VAL C . n B 2 74 GLU 74 74 74 GLU GLU C . n B 2 75 GLU 75 75 75 GLU GLU C . n B 2 76 SER 76 76 76 SER SER C . n B 2 77 GLY 77 77 77 GLY GLY C . n B 2 78 TYR 78 78 78 TYR TYR C . n B 2 79 ALA 79 79 79 ALA ALA C . n B 2 80 GLY 80 80 80 GLY GLY C . n B 2 81 PHE 81 81 81 PHE PHE C . n B 2 82 ILE 82 82 82 ILE ILE C . n B 2 83 MET 83 83 83 MET MET C . n B 2 84 PRO 84 84 84 PRO PRO C . n B 2 85 ILE 85 85 85 ILE ILE C . n B 2 86 GLU 86 86 86 GLU GLU C . n B 2 87 VAL 87 87 87 VAL VAL C . n B 2 88 HIS 88 88 88 HIS HIS C . n B 2 89 PHE 89 89 89 PHE PHE C . n B 2 90 LYS 90 90 90 LYS LYS C . n B 2 91 ASN 91 91 91 ASN ASN C . n B 2 92 LYS 92 92 92 LYS LYS C . n B 2 93 GLU 93 93 93 GLU GLU C . n B 2 94 GLU 94 94 94 GLU GLU C . n B 2 95 PRO 95 95 95 PRO PRO C . n B 2 96 ARG 96 96 96 ARG ARG C . n B 2 97 LYS 97 97 97 LYS LYS C . n B 2 98 VAL 98 98 98 VAL VAL C . n B 2 99 CYS 99 99 99 CYS CYS C . n B 2 100 PHE 100 100 100 PHE PHE C . n B 2 101 THR 101 101 101 THR THR C . n B 2 102 TYR 102 102 102 TYR TYR C . n B 2 103 ASP 103 103 103 ASP ASP C . n B 2 104 LEU 104 104 104 LEU LEU C . n B 2 105 PHE 105 105 105 PHE PHE C . n B 2 106 LEU 106 106 106 LEU LEU C . n B 2 107 ASN 107 107 107 ASN ASN C . n B 2 108 LEU 108 108 108 LEU LEU C . n B 2 109 GLU 109 109 109 GLU GLU C . n B 2 110 GLY 110 110 110 GLY GLY C . n B 2 111 ASN 111 111 111 ASN ASN C . n B 2 112 PRO 112 112 112 PRO PRO C . n B 2 113 PRO 113 113 113 PRO PRO C . n B 2 114 VAL 114 114 114 VAL VAL C . n B 2 115 ASN 115 115 115 ASN ASN C . n B 2 116 HIS 116 116 116 HIS HIS C . n B 2 117 LEU 117 117 117 LEU LEU C . n B 2 118 ARG 118 118 118 ARG ARG C . n B 2 119 CYS 119 119 119 CYS CYS C . n B 2 120 GLU 120 120 120 GLU GLU C . n B 2 121 LYS 121 121 121 LYS LYS C . n B 2 122 LEU 122 122 122 LEU LEU C . n B 2 123 THR 123 123 123 THR THR C . n B 2 124 PHE 124 124 124 PHE PHE C . n B 2 125 ASN 125 125 125 ASN ASN C . n B 2 126 ASN 126 126 126 ASN ASN C . n B 2 127 PRO 127 127 127 PRO PRO C . n B 2 128 THR 128 128 128 THR THR C . n B 2 129 THR 129 129 129 THR THR C . n B 2 130 GLU 130 130 130 GLU GLU C . n B 2 131 PHE 131 131 131 PHE PHE C . n B 2 132 ARG 132 132 132 ARG ARG C . n B 2 133 TYR 133 133 133 TYR TYR C . n B 2 134 LYS 134 134 134 LYS LYS C . n B 2 135 LEU 135 135 135 LEU LEU C . n B 2 136 LEU 136 136 136 LEU LEU C . n B 2 137 ARG 137 137 137 ARG ARG C . n B 2 138 ALA 138 138 138 ALA ALA C . n B 2 139 GLY 139 139 139 GLY GLY C . n B 2 140 GLY 140 140 140 GLY GLY C . n B 2 141 VAL 141 141 141 VAL VAL C . n B 2 142 MET 142 142 142 MET MET C . n B 2 143 VAL 143 143 143 VAL VAL C . n B 2 144 MET 144 144 ? ? ? C . n B 2 145 PRO 145 145 ? ? ? C . n B 2 146 GLU 146 146 ? ? ? C . n B 2 147 GLY 147 147 ? ? ? C . n B 2 148 ALA 148 148 ? ? ? C . n B 2 149 HIS 149 149 ? ? ? C . n B 2 150 HIS 150 150 ? ? ? C . n B 2 151 HIS 151 151 ? ? ? C . n B 2 152 HIS 152 152 ? ? ? C . n B 2 153 HIS 153 153 ? ? ? C . n B 2 154 HIS 154 154 ? ? ? C . n # _pdbx_entity_instance_feature.ordinal 1 _pdbx_entity_instance_feature.comp_id A1IQT _pdbx_entity_instance_feature.asym_id ? _pdbx_entity_instance_feature.seq_num ? _pdbx_entity_instance_feature.auth_comp_id A1IQT _pdbx_entity_instance_feature.auth_asym_id ? _pdbx_entity_instance_feature.auth_seq_num ? _pdbx_entity_instance_feature.feature_type 'SUBJECT OF INVESTIGATION' _pdbx_entity_instance_feature.details ? # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 ZN 1 501 501 ZN ZN B . D 4 A1IQT 1 201 201 A1IQT ME1 C . # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 9DUR _cell.details ? _cell.formula_units_Z ? _cell.length_a 1.00 _cell.length_a_esd ? _cell.length_b 1.00 _cell.length_b_esd ? _cell.length_c 1.00 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB ? _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 9DUR _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 9DUR _exptl.crystals_number ? _exptl.details ? _exptl.method 'ELECTRON MICROSCOPY' _exptl.method_details ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean 155.43 _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 9DUR _refine.pdbx_refine_id 'ELECTRON MICROSCOPY' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high . _refine.ls_d_res_low ? _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs ? _refine.ls_number_reflns_R_free ? _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs ? _refine.ls_percent_reflns_R_free ? _refine.ls_R_factor_all ? _refine.ls_R_factor_obs ? _refine.ls_R_factor_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work ? _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method NONE _refine.pdbx_method_to_determine_struct ? _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values 'GeoStd + Monomer Library + CDL v1.2' _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id ? _refine.overall_SU_B ? _refine.overall_SU_ML ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'ELECTRON MICROSCOPY' ? 0.0032 ? 4257 ? f_bond_d ? ? 'ELECTRON MICROSCOPY' ? 0.7123 ? 5775 ? f_angle_d ? ? 'ELECTRON MICROSCOPY' ? 0.0463 ? 623 ? f_chiral_restr ? ? 'ELECTRON MICROSCOPY' ? 0.0054 ? 743 ? f_plane_restr ? ? 'ELECTRON MICROSCOPY' ? 4.9003 ? 597 ? f_dihedral_angle_d ? ? # _struct.entry_id 9DUR _struct.title 'Cryo-EM Structure of CRBN:dHTC1:ENL YEATS' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 9DUR _struct_keywords.text 'Mammalian, ENL YEATS, CRBN, dHTC1, CIP, targeted protein degradation, LIGASE' _struct_keywords.pdbx_keywords LIGASE # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 UNP CRBN_HUMAN Q96SW2 ? 1 ;MAGEGDQQDAAHNMGNHLPLLPAESEEEDEMEVEDQDSKEAKKPNIINFDTSLPTSHTYLGADMEEFHGRTLHDDDSCQV IPVLPQVMMILIPGQTLPLQLFHPQEVSMVRNLIQKDRTFAVLAYSNVQEREAQFGTTAEIYAYREEQDFGIEIVKVKAI GRQRFKVLELRTQSDGIQQAKVQILPECVLPSTMSAVQLESLNKCQIFPSKPVSREDQCSYKWWQKYQKRKFHCANLTSW PRWLYSLYDAETLMDRIKKQLREWDENLKDDSLPSNPIDFSYRVAACLPIDDVLRIQLLKIGSAIQRLRCELDIMNKCTS LCCKQCQETEITTKNEIFSLSLCGPMAAYVNPHGYVHETLTVYKACNLNLIGRPSTEHSWFPGYAWTVAQCKICASHIGW KFTATKKDMSPQKFWGLTRSALLPTIPDTEDEISPDKVILCL ; 1 2 UNP ENL_HUMAN Q03111 ? 2 ;MDNQCTVQVRLELGHRAQLRKKPTTEGFTHDWMVFVRGPEQCDIQHFVEKVVFWLHDSFPKPRRVCKEPPYKVEESGYAG FIMPIEVHFKNKEEPRKVCFTYDLFLNLEGNPPVNHLRCEKLTFNNPTTEFRYKLLRAGGVMVMPEGA ; 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 9DUR B 44 ? 485 ? Q96SW2 1 ? 442 ? 1 442 2 2 9DUR C 1 ? 148 ? Q03111 1 ? 148 ? 1 148 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 9DUR MET B 1 ? UNP Q96SW2 ? ? 'initiating methionine' -42 1 1 9DUR ASP B 2 ? UNP Q96SW2 ? ? 'expression tag' -41 2 1 9DUR TYR B 3 ? UNP Q96SW2 ? ? 'expression tag' -40 3 1 9DUR LYS B 4 ? UNP Q96SW2 ? ? 'expression tag' -39 4 1 9DUR ASP B 5 ? UNP Q96SW2 ? ? 'expression tag' -38 5 1 9DUR ASP B 6 ? UNP Q96SW2 ? ? 'expression tag' -37 6 1 9DUR ASP B 7 ? UNP Q96SW2 ? ? 'expression tag' -36 7 1 9DUR ASP B 8 ? UNP Q96SW2 ? ? 'expression tag' -35 8 1 9DUR LYS B 9 ? UNP Q96SW2 ? ? 'expression tag' -34 9 1 9DUR SER B 10 ? UNP Q96SW2 ? ? 'expression tag' -33 10 1 9DUR ALA B 11 ? UNP Q96SW2 ? ? 'expression tag' -32 11 1 9DUR VAL B 12 ? UNP Q96SW2 ? ? 'expression tag' -31 12 1 9DUR ASP B 13 ? UNP Q96SW2 ? ? 'expression tag' -30 13 1 9DUR GLU B 14 ? UNP Q96SW2 ? ? 'expression tag' -29 14 1 9DUR ASN B 15 ? UNP Q96SW2 ? ? 'expression tag' -28 15 1 9DUR LEU B 16 ? UNP Q96SW2 ? ? 'expression tag' -27 16 1 9DUR TYR B 17 ? UNP Q96SW2 ? ? 'expression tag' -26 17 1 9DUR PHE B 18 ? UNP Q96SW2 ? ? 'expression tag' -25 18 1 9DUR GLN B 19 ? UNP Q96SW2 ? ? 'expression tag' -24 19 1 9DUR GLY B 20 ? UNP Q96SW2 ? ? 'expression tag' -23 20 1 9DUR GLY B 21 ? UNP Q96SW2 ? ? 'expression tag' -22 21 1 9DUR GLY B 22 ? UNP Q96SW2 ? ? 'expression tag' -21 22 1 9DUR ARG B 23 ? UNP Q96SW2 ? ? 'expression tag' -20 23 1 9DUR GLY B 24 ? UNP Q96SW2 ? ? 'expression tag' -19 24 1 9DUR GLY B 25 ? UNP Q96SW2 ? ? 'expression tag' -18 25 1 9DUR SER B 26 ? UNP Q96SW2 ? ? 'expression tag' -17 26 1 9DUR ALA B 27 ? UNP Q96SW2 ? ? 'expression tag' -16 27 1 9DUR HIS B 28 ? UNP Q96SW2 ? ? 'expression tag' -15 28 1 9DUR ILE B 29 ? UNP Q96SW2 ? ? 'expression tag' -14 29 1 9DUR VAL B 30 ? UNP Q96SW2 ? ? 'expression tag' -13 30 1 9DUR MET B 31 ? UNP Q96SW2 ? ? 'expression tag' -12 31 1 9DUR VAL B 32 ? UNP Q96SW2 ? ? 'expression tag' -11 32 1 9DUR ASP B 33 ? UNP Q96SW2 ? ? 'expression tag' -10 33 1 9DUR ALA B 34 ? UNP Q96SW2 ? ? 'expression tag' -9 34 1 9DUR TYR B 35 ? UNP Q96SW2 ? ? 'expression tag' -8 35 1 9DUR LYS B 36 ? UNP Q96SW2 ? ? 'expression tag' -7 36 1 9DUR PRO B 37 ? UNP Q96SW2 ? ? 'expression tag' -6 37 1 9DUR THR B 38 ? UNP Q96SW2 ? ? 'expression tag' -5 38 1 9DUR LYS B 39 ? UNP Q96SW2 ? ? 'expression tag' -4 39 1 9DUR GLY B 40 ? UNP Q96SW2 ? ? 'expression tag' -3 40 1 9DUR GLY B 41 ? UNP Q96SW2 ? ? 'expression tag' -2 41 1 9DUR SER B 42 ? UNP Q96SW2 ? ? 'expression tag' -1 42 1 9DUR GLY B 43 ? UNP Q96SW2 ? ? 'expression tag' 0 43 2 9DUR HIS C 149 ? UNP Q03111 ? ? 'expression tag' 149 44 2 9DUR HIS C 150 ? UNP Q03111 ? ? 'expression tag' 150 45 2 9DUR HIS C 151 ? UNP Q03111 ? ? 'expression tag' 151 46 2 9DUR HIS C 152 ? UNP Q03111 ? ? 'expression tag' 152 47 2 9DUR HIS C 153 ? UNP Q03111 ? ? 'expression tag' 153 48 2 9DUR HIS C 154 ? UNP Q03111 ? ? 'expression tag' 154 49 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'electron microscopy' _pdbx_struct_assembly_auth_evidence.details 'not applicable' # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 SER A 95 ? HIS A 100 ? SER B 52 HIS B 57 1 ? 6 HELX_P HELX_P2 AA2 HIS A 146 ? LYS A 159 ? HIS B 103 LYS B 116 1 ? 14 HELX_P HELX_P3 AA3 LEU A 242 ? ILE A 250 ? LEU B 199 ILE B 207 5 ? 9 HELX_P HELX_P4 AA4 SER A 263 ? PHE A 275 ? SER B 220 PHE B 232 1 ? 13 HELX_P HELX_P5 AA5 HIS A 276 ? THR A 281 ? HIS B 233 THR B 238 5 ? 6 HELX_P HELX_P6 AA6 PRO A 284 ? SER A 289 ? PRO B 241 SER B 246 1 ? 6 HELX_P HELX_P7 AA7 ASP A 292 ? ASP A 308 ? ASP B 249 ASP B 265 1 ? 17 HELX_P HELX_P8 AA8 LYS A 312 ? LEU A 316 ? LYS B 269 LEU B 273 5 ? 5 HELX_P HELX_P9 AA9 ASN A 319 ? LEU A 331 ? ASN B 276 LEU B 288 1 ? 13 HELX_P HELX_P10 AB1 ASP A 334 ? ILE A 344 ? ASP B 291 ILE B 301 1 ? 11 HELX_P HELX_P11 AB2 SER A 346 ? CYS A 361 ? SER B 303 CYS B 318 1 ? 16 HELX_P HELX_P12 AB3 ASN A 378 ? ILE A 380 ? ASN B 335 ILE B 337 5 ? 3 HELX_P HELX_P13 AB4 ASP B 43 ? HIS B 46 ? ASP C 43 HIS C 46 5 ? 4 HELX_P HELX_P14 AB5 THR B 128 ? GLY B 139 ? THR C 128 GLY C 139 1 ? 12 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A CYS 366 SG ? ? ? 1_555 C ZN . ZN ? ? B CYS 323 B ZN 501 1_555 ? ? ? ? ? ? ? 2.337 ? ? metalc2 metalc ? ? A CYS 369 SG ? ? ? 1_555 C ZN . ZN ? ? B CYS 326 B ZN 501 1_555 ? ? ? ? ? ? ? 2.326 ? ? metalc3 metalc ? ? A CYS 434 SG ? ? ? 1_555 C ZN . ZN ? ? B CYS 391 B ZN 501 1_555 ? ? ? ? ? ? ? 2.333 ? ? metalc4 metalc ? ? A CYS 437 SG ? ? ? 1_555 C ZN . ZN ? ? B CYS 394 B ZN 501 1_555 ? ? ? ? ? ? ? 2.331 ? ? # _struct_conn_type.id metalc _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 SG ? A CYS 366 ? B CYS 323 ? 1_555 ZN ? C ZN . ? B ZN 501 ? 1_555 SG ? A CYS 369 ? B CYS 326 ? 1_555 108.9 ? 2 SG ? A CYS 366 ? B CYS 323 ? 1_555 ZN ? C ZN . ? B ZN 501 ? 1_555 SG ? A CYS 434 ? B CYS 391 ? 1_555 112.4 ? 3 SG ? A CYS 369 ? B CYS 326 ? 1_555 ZN ? C ZN . ? B ZN 501 ? 1_555 SG ? A CYS 434 ? B CYS 391 ? 1_555 108.2 ? 4 SG ? A CYS 366 ? B CYS 323 ? 1_555 ZN ? C ZN . ? B ZN 501 ? 1_555 SG ? A CYS 437 ? B CYS 394 ? 1_555 112.2 ? 5 SG ? A CYS 369 ? B CYS 326 ? 1_555 ZN ? C ZN . ? B ZN 501 ? 1_555 SG ? A CYS 437 ? B CYS 394 ? 1_555 105.0 ? 6 SG ? A CYS 434 ? B CYS 391 ? 1_555 ZN ? C ZN . ? B ZN 501 ? 1_555 SG ? A CYS 437 ? B CYS 394 ? 1_555 109.8 ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 SER 453 A . ? SER 410 B PRO 454 A ? PRO 411 B 1 -4.17 2 PRO 69 B . ? PRO 69 C PRO 70 B ? PRO 70 C 1 -1.19 3 GLU 94 B . ? GLU 94 C PRO 95 B ? PRO 95 C 1 0.38 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 4 ? AA2 ? 5 ? AA3 ? 3 ? AA4 ? 6 ? AA5 ? 4 ? AA6 ? 4 ? AA7 ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel AA2 1 2 ? anti-parallel AA2 2 3 ? anti-parallel AA2 3 4 ? anti-parallel AA2 4 5 ? anti-parallel AA3 1 2 ? anti-parallel AA3 2 3 ? anti-parallel AA4 1 2 ? anti-parallel AA4 2 3 ? anti-parallel AA4 3 4 ? anti-parallel AA4 4 5 ? anti-parallel AA4 5 6 ? anti-parallel AA5 1 2 ? anti-parallel AA5 2 3 ? anti-parallel AA5 3 4 ? anti-parallel AA6 1 2 ? anti-parallel AA6 2 3 ? anti-parallel AA6 3 4 ? anti-parallel AA7 1 2 ? anti-parallel AA7 2 3 ? anti-parallel AA7 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 GLU A 108 ? GLU A 109 ? GLU B 65 GLU B 66 AA1 2 PHE A 178 ? ASP A 192 ? PHE B 135 ASP B 149 AA1 3 ILE A 195 ? ARG A 214 ? ILE B 152 ARG B 171 AA1 4 THR A 139 ? LEU A 144 ? THR B 96 LEU B 101 AA2 1 CYS A 121 ? PRO A 125 ? CYS B 78 PRO B 82 AA2 2 GLN A 222 ? ILE A 227 ? GLN B 179 ILE B 184 AA2 3 ILE A 195 ? ARG A 214 ? ILE B 152 ARG B 171 AA2 4 PHE A 178 ? ASP A 192 ? PHE B 135 ASP B 149 AA2 5 THR A 162 ? LEU A 166 ? THR B 119 LEU B 123 AA3 1 GLU A 373 ? THR A 376 ? GLU B 330 THR B 333 AA3 2 SER A 363 ? CYS A 366 ? SER B 320 CYS B 323 AA3 3 LEU A 465 ? THR A 468 ? LEU B 422 THR B 425 AA4 1 MET A 389 ? VAL A 393 ? MET B 346 VAL B 350 AA4 2 VAL A 399 ? VAL A 405 ? VAL B 356 VAL B 362 AA4 3 LYS A 456 ? THR A 461 ? LYS B 413 THR B 418 AA4 4 HIS A 440 ? ALA A 447 ? HIS B 397 ALA B 404 AA4 5 TYR A 427 ? CYS A 434 ? TYR B 384 CYS B 391 AA4 6 LEU A 411 ? SER A 418 ? LEU B 368 SER B 375 AA5 1 TYR B 71 ? GLY B 77 ? TYR C 71 GLY C 77 AA5 2 HIS B 30 ? VAL B 36 ? HIS C 30 VAL C 36 AA5 3 VAL B 7 ? LEU B 19 ? VAL C 7 LEU C 19 AA5 4 VAL B 114 ? PHE B 124 ? VAL C 114 PHE C 124 AA6 1 TYR B 71 ? GLY B 77 ? TYR C 71 GLY C 77 AA6 2 HIS B 30 ? VAL B 36 ? HIS C 30 VAL C 36 AA6 3 VAL B 7 ? LEU B 19 ? VAL C 7 LEU C 19 AA6 4 VAL B 141 ? MET B 142 ? VAL C 141 MET C 142 AA7 1 ARG B 63 ? CYS B 66 ? ARG C 63 CYS C 66 AA7 2 VAL B 48 ? TRP B 54 ? VAL C 48 TRP C 54 AA7 3 PHE B 81 ? PHE B 89 ? PHE C 81 PHE C 89 AA7 4 LYS B 97 ? LEU B 104 ? LYS C 97 LEU C 104 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N GLU A 108 ? N GLU B 65 O TYR A 187 ? O TYR B 144 AA1 2 3 N TYR A 185 ? N TYR B 142 O LYS A 201 ? O LYS B 158 AA1 3 4 O VAL A 200 ? O VAL B 157 N LEU A 142 ? N LEU B 99 AA2 1 2 N ILE A 124 ? N ILE B 81 O ALA A 223 ? O ALA B 180 AA2 2 3 O LYS A 224 ? O LYS B 181 N GLU A 212 ? N GLU B 169 AA2 3 4 O LYS A 201 ? O LYS B 158 N TYR A 185 ? N TYR B 142 AA2 4 5 O THR A 180 ? O THR B 137 N VAL A 165 ? N VAL B 122 AA3 1 2 O ILE A 374 ? O ILE B 331 N LEU A 364 ? N LEU B 321 AA3 2 3 N CYS A 365 ? N CYS B 322 O LEU A 466 ? O LEU B 423 AA4 1 2 N TYR A 392 ? N TYR B 349 O HIS A 400 ? O HIS B 357 AA4 2 3 N VAL A 405 ? N VAL B 362 O TRP A 458 ? O TRP B 415 AA4 3 4 O GLY A 459 ? O GLY B 416 N TRP A 443 ? N TRP B 400 AA4 4 5 O GLY A 442 ? O GLY B 399 N ALA A 432 ? N ALA B 389 AA4 5 6 O GLN A 433 ? O GLN B 390 N ASN A 412 ? N ASN B 369 AA5 1 2 O GLY B 77 ? O GLY C 77 N HIS B 30 ? N HIS C 30 AA5 2 3 O PHE B 35 ? O PHE C 35 N GLY B 14 ? N GLY C 14 AA5 3 4 N VAL B 9 ? N VAL C 9 O LEU B 122 ? O LEU C 122 AA6 1 2 O GLY B 77 ? O GLY C 77 N HIS B 30 ? N HIS C 30 AA6 2 3 O PHE B 35 ? O PHE C 35 N GLY B 14 ? N GLY C 14 AA6 3 4 N GLN B 8 ? N GLN C 8 O VAL B 141 ? O VAL C 141 AA7 1 2 O ARG B 64 ? O ARG C 64 N PHE B 53 ? N PHE C 53 AA7 2 3 N VAL B 52 ? N VAL C 52 O GLU B 86 ? O GLU C 86 AA7 3 4 N MET B 83 ? N MET C 83 O TYR B 102 ? O TYR C 102 # _pdbx_entry_details.entry_id 9DUR _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.has_ligand_of_interest Y _pdbx_entry_details.has_protein_modification N # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O B ARG 111 ? ? HE21 B GLN 115 ? ? 1.53 2 1 O B GLY 383 ? ? HG1 B THR 405 ? ? 1.60 3 1 O B CYS 391 ? ? H B ALA 395 ? ? 1.60 4 1 ND2 C ASN 107 ? ? O C PRO 112 ? ? 2.04 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASP B 76 ? ? 32.22 49.48 2 1 ASP B 117 ? ? 75.45 -10.16 3 1 PHE B 150 ? ? 58.57 15.27 4 1 GLN B 327 ? ? 77.78 -5.21 5 1 ASP B 408 ? ? -93.69 50.64 6 1 PRO C 39 ? ? -68.55 -176.95 7 1 LYS C 61 ? ? 52.98 71.70 8 1 PHE C 81 ? ? -167.77 -169.88 9 1 LEU C 108 ? ? -112.83 -157.34 10 1 GLU C 109 ? ? 56.79 18.46 # _space_group_symop.id 1 _space_group_symop.operation_xyz x,y,z # _em_3d_fitting.id 1 _em_3d_fitting.entry_id 9DUR _em_3d_fitting.method ? _em_3d_fitting.target_criteria ? _em_3d_fitting.details ? _em_3d_fitting.overall_b_value 119.8 _em_3d_fitting.ref_space ? _em_3d_fitting.ref_protocol ? # loop_ _em_3d_fitting_list.id _em_3d_fitting_list.3d_fitting_id _em_3d_fitting_list.pdb_entry_id _em_3d_fitting_list.pdb_chain_id _em_3d_fitting_list.pdb_chain_residue_range _em_3d_fitting_list.details _em_3d_fitting_list.chain_id _em_3d_fitting_list.chain_residue_range _em_3d_fitting_list.source_name _em_3d_fitting_list.type _em_3d_fitting_list.accession_code _em_3d_fitting_list.initial_refinement_model_id 1 1 8tnq B ? ? B ? PDB 'experimental model' 8tnq 1 2 1 6phy A ? ? A ? PDB 'experimental model' 6phy 2 # _em_3d_reconstruction.entry_id 9DUR _em_3d_reconstruction.id 1 _em_3d_reconstruction.method ? _em_3d_reconstruction.algorithm ? _em_3d_reconstruction.citation_id ? _em_3d_reconstruction.details ? _em_3d_reconstruction.resolution 2.9 _em_3d_reconstruction.resolution_method 'FSC 0.143 CUT-OFF' _em_3d_reconstruction.magnification_calibration ? _em_3d_reconstruction.nominal_pixel_size ? _em_3d_reconstruction.actual_pixel_size ? _em_3d_reconstruction.num_particles 185312 _em_3d_reconstruction.euler_angles_details ? _em_3d_reconstruction.num_class_averages ? _em_3d_reconstruction.refinement_type ? _em_3d_reconstruction.image_processing_id 1 _em_3d_reconstruction.symmetry_type POINT # _em_buffer.id 1 _em_buffer.specimen_id 1 _em_buffer.name ? _em_buffer.details '30 mM HEPES/NaOH pH7.4, 150 mM NaCl. DMSO concentrations were kept below 2% (v/v)' _em_buffer.pH 7.4 # loop_ _em_entity_assembly.id _em_entity_assembly.parent_id _em_entity_assembly.source _em_entity_assembly.type _em_entity_assembly.name _em_entity_assembly.details _em_entity_assembly.synonym _em_entity_assembly.oligomeric_details _em_entity_assembly.entity_id_list 1 0 'MULTIPLE SOURCES' COMPLEX 'Ternary complex of dHTC1 induced DDB1dB/CRBN, ENL YEATS complex' 'ENL YEATS domain bound to full length CRBN bound via degrader dHTC1' ? ? '1, 2' 2 1 RECOMBINANT COMPLEX 'ENL YEATS domain' ? ? ? 2 3 1 RECOMBINANT COMPLEX DDB1dB/CRBN ? ? ? 1 # _em_imaging.entry_id 9DUR _em_imaging.id 1 _em_imaging.astigmatism ? _em_imaging.electron_beam_tilt_params ? _em_imaging.residual_tilt ? _em_imaging.microscope_model 'TFS KRIOS' _em_imaging.specimen_holder_type ? _em_imaging.specimen_holder_model 'FEI TITAN KRIOS AUTOGRID HOLDER' _em_imaging.details ? _em_imaging.date ? _em_imaging.accelerating_voltage 300 _em_imaging.illumination_mode 'FLOOD BEAM' _em_imaging.mode 'BRIGHT FIELD' _em_imaging.nominal_cs 2.7 _em_imaging.nominal_defocus_min 800 _em_imaging.nominal_defocus_max 2000 _em_imaging.calibrated_defocus_min ? _em_imaging.calibrated_defocus_max ? _em_imaging.tilt_angle_min ? _em_imaging.tilt_angle_max ? _em_imaging.nominal_magnification 165000 _em_imaging.calibrated_magnification ? _em_imaging.electron_source 'FIELD EMISSION GUN' _em_imaging.citation_id ? _em_imaging.temperature ? _em_imaging.detector_distance ? _em_imaging.recording_temperature_minimum ? _em_imaging.recording_temperature_maximum ? _em_imaging.alignment_procedure 'COMA FREE' _em_imaging.c2_aperture_diameter 50.0 _em_imaging.specimen_id 1 _em_imaging.cryogen NITROGEN # _em_sample_support.id 1 _em_sample_support.film_material ? _em_sample_support.method ? _em_sample_support.grid_material GOLD _em_sample_support.grid_mesh_size 300 _em_sample_support.grid_type 'Quantifoil R0.6/1' _em_sample_support.details ? _em_sample_support.specimen_id 1 _em_sample_support.citation_id ? # _em_vitrification.entry_id 9DUR _em_vitrification.id 1 _em_vitrification.specimen_id 1 _em_vitrification.cryogen_name ETHANE _em_vitrification.humidity 90 _em_vitrification.temp ? _em_vitrification.chamber_temperature 283 _em_vitrification.instrument 'LEICA EM GP' _em_vitrification.method ? _em_vitrification.time_resolved_state ? _em_vitrification.citation_id ? _em_vitrification.details ;Grids were vitrified using a Leica EM GP plunge freezer operated at 90% humidity and 10 C. Grids were first pre-incubated with 4 uL of 10 uM CRBN-agnostic IKZF1_140-196_Q146A,G151N for 1 minute and then blotted from behind for 4 s. Immediately, 4 uL of mixturewas applied to the grids before blotting for 4 s and plunging into liquid ethane at -181 C ; # _em_experiment.entry_id 9DUR _em_experiment.id 1 _em_experiment.reconstruction_method 'SINGLE PARTICLE' _em_experiment.aggregation_state PARTICLE _em_experiment.entity_assembly_id 1 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 B MET -42 ? A MET 1 2 1 Y 1 B ASP -41 ? A ASP 2 3 1 Y 1 B TYR -40 ? A TYR 3 4 1 Y 1 B LYS -39 ? A LYS 4 5 1 Y 1 B ASP -38 ? A ASP 5 6 1 Y 1 B ASP -37 ? A ASP 6 7 1 Y 1 B ASP -36 ? A ASP 7 8 1 Y 1 B ASP -35 ? A ASP 8 9 1 Y 1 B LYS -34 ? A LYS 9 10 1 Y 1 B SER -33 ? A SER 10 11 1 Y 1 B ALA -32 ? A ALA 11 12 1 Y 1 B VAL -31 ? A VAL 12 13 1 Y 1 B ASP -30 ? A ASP 13 14 1 Y 1 B GLU -29 ? A GLU 14 15 1 Y 1 B ASN -28 ? A ASN 15 16 1 Y 1 B LEU -27 ? A LEU 16 17 1 Y 1 B TYR -26 ? A TYR 17 18 1 Y 1 B PHE -25 ? A PHE 18 19 1 Y 1 B GLN -24 ? A GLN 19 20 1 Y 1 B GLY -23 ? A GLY 20 21 1 Y 1 B GLY -22 ? A GLY 21 22 1 Y 1 B GLY -21 ? A GLY 22 23 1 Y 1 B ARG -20 ? A ARG 23 24 1 Y 1 B GLY -19 ? A GLY 24 25 1 Y 1 B GLY -18 ? A GLY 25 26 1 Y 1 B SER -17 ? A SER 26 27 1 Y 1 B ALA -16 ? A ALA 27 28 1 Y 1 B HIS -15 ? A HIS 28 29 1 Y 1 B ILE -14 ? A ILE 29 30 1 Y 1 B VAL -13 ? A VAL 30 31 1 Y 1 B MET -12 ? A MET 31 32 1 Y 1 B VAL -11 ? A VAL 32 33 1 Y 1 B ASP -10 ? A ASP 33 34 1 Y 1 B ALA -9 ? A ALA 34 35 1 Y 1 B TYR -8 ? A TYR 35 36 1 Y 1 B LYS -7 ? A LYS 36 37 1 Y 1 B PRO -6 ? A PRO 37 38 1 Y 1 B THR -5 ? A THR 38 39 1 Y 1 B LYS -4 ? A LYS 39 40 1 Y 1 B GLY -3 ? A GLY 40 41 1 Y 1 B GLY -2 ? A GLY 41 42 1 Y 1 B SER -1 ? A SER 42 43 1 Y 1 B GLY 0 ? A GLY 43 44 1 Y 1 B MET 1 ? A MET 44 45 1 Y 1 B ALA 2 ? A ALA 45 46 1 Y 1 B GLY 3 ? A GLY 46 47 1 Y 1 B GLU 4 ? A GLU 47 48 1 Y 1 B GLY 5 ? A GLY 48 49 1 Y 1 B ASP 6 ? A ASP 49 50 1 Y 1 B GLN 7 ? A GLN 50 51 1 Y 1 B GLN 8 ? A GLN 51 52 1 Y 1 B ASP 9 ? A ASP 52 53 1 Y 1 B ALA 10 ? A ALA 53 54 1 Y 1 B ALA 11 ? A ALA 54 55 1 Y 1 B HIS 12 ? A HIS 55 56 1 Y 1 B ASN 13 ? A ASN 56 57 1 Y 1 B MET 14 ? A MET 57 58 1 Y 1 B GLY 15 ? A GLY 58 59 1 Y 1 B ASN 16 ? A ASN 59 60 1 Y 1 B HIS 17 ? A HIS 60 61 1 Y 1 B LEU 18 ? A LEU 61 62 1 Y 1 B PRO 19 ? A PRO 62 63 1 Y 1 B LEU 20 ? A LEU 63 64 1 Y 1 B LEU 21 ? A LEU 64 65 1 Y 1 B PRO 22 ? A PRO 65 66 1 Y 1 B ALA 23 ? A ALA 66 67 1 Y 1 B GLU 24 ? A GLU 67 68 1 Y 1 B SER 25 ? A SER 68 69 1 Y 1 B GLU 26 ? A GLU 69 70 1 Y 1 B GLU 27 ? A GLU 70 71 1 Y 1 B GLU 28 ? A GLU 71 72 1 Y 1 B ASP 29 ? A ASP 72 73 1 Y 1 B GLU 30 ? A GLU 73 74 1 Y 1 B MET 31 ? A MET 74 75 1 Y 1 B GLU 32 ? A GLU 75 76 1 Y 1 B VAL 33 ? A VAL 76 77 1 Y 1 B GLU 34 ? A GLU 77 78 1 Y 1 B ASP 35 ? A ASP 78 79 1 Y 1 B GLN 36 ? A GLN 79 80 1 Y 1 B ASP 37 ? A ASP 80 81 1 Y 1 B SER 38 ? A SER 81 82 1 Y 1 B LYS 39 ? A LYS 82 83 1 Y 1 B GLU 40 ? A GLU 83 84 1 Y 1 B ALA 41 ? A ALA 84 85 1 Y 1 B LYS 42 ? A LYS 85 86 1 Y 1 B LYS 43 ? A LYS 86 87 1 Y 1 B PRO 44 ? A PRO 87 88 1 Y 1 B ASN 45 ? A ASN 88 89 1 Y 1 B ILE 46 ? A ILE 89 90 1 Y 1 B ILE 47 ? A ILE 90 91 1 Y 1 B ASN 48 ? A ASN 91 92 1 Y 1 B PHE 49 ? A PHE 92 93 1 Y 1 B SER 126 ? A SER 169 94 1 Y 1 B ASN 127 ? A ASN 170 95 1 Y 1 B VAL 128 ? A VAL 171 96 1 Y 1 B GLN 129 ? A GLN 172 97 1 Y 1 B GLU 130 ? A GLU 173 98 1 Y 1 B ARG 131 ? A ARG 174 99 1 Y 1 B GLU 132 ? A GLU 175 100 1 Y 1 B VAL 213 ? A VAL 256 101 1 Y 1 B SER 214 ? A SER 257 102 1 Y 1 B ARG 215 ? A ARG 258 103 1 Y 1 B GLU 216 ? A GLU 259 104 1 Y 1 B PRO 427 ? A PRO 470 105 1 Y 1 B ASP 428 ? A ASP 471 106 1 Y 1 B THR 429 ? A THR 472 107 1 Y 1 B GLU 430 ? A GLU 473 108 1 Y 1 B ASP 431 ? A ASP 474 109 1 Y 1 B GLU 432 ? A GLU 475 110 1 Y 1 B ILE 433 ? A ILE 476 111 1 Y 1 B SER 434 ? A SER 477 112 1 Y 1 B PRO 435 ? A PRO 478 113 1 Y 1 B ASP 436 ? A ASP 479 114 1 Y 1 B LYS 437 ? A LYS 480 115 1 Y 1 B VAL 438 ? A VAL 481 116 1 Y 1 B ILE 439 ? A ILE 482 117 1 Y 1 B LEU 440 ? A LEU 483 118 1 Y 1 B CYS 441 ? A CYS 484 119 1 Y 1 B LEU 442 ? A LEU 485 120 1 Y 1 C MET 1 ? B MET 1 121 1 Y 1 C ASP 2 ? B ASP 2 122 1 Y 1 C ASN 3 ? B ASN 3 123 1 Y 1 C GLN 4 ? B GLN 4 124 1 Y 1 C CYS 5 ? B CYS 5 125 1 Y 1 C MET 144 ? B MET 144 126 1 Y 1 C PRO 145 ? B PRO 145 127 1 Y 1 C GLU 146 ? B GLU 146 128 1 Y 1 C GLY 147 ? B GLY 147 129 1 Y 1 C ALA 148 ? B ALA 148 130 1 Y 1 C HIS 149 ? B HIS 149 131 1 Y 1 C HIS 150 ? B HIS 150 132 1 Y 1 C HIS 151 ? B HIS 151 133 1 Y 1 C HIS 152 ? B HIS 152 134 1 Y 1 C HIS 153 ? B HIS 153 135 1 Y 1 C HIS 154 ? B HIS 154 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal A1IQT N1 N N N 1 A1IQT N3 N N N 2 A1IQT C4 C N N 3 A1IQT C5 C N N 4 A1IQT C6 C N N 5 A1IQT C7 C N N 6 A1IQT C8 C N N 7 A1IQT C10 C N N 8 A1IQT C13 C Y N 9 A1IQT C15 C Y N 10 A1IQT C17 C Y N 11 A1IQT C20 C Y N 12 A1IQT C21 C N N 13 A1IQT C22 C N N 14 A1IQT C24 C N N 15 A1IQT C26 C Y N 16 A1IQT C28 C Y N 17 A1IQT C1 C N N 18 A1IQT C11 C N N 19 A1IQT C12 C Y N 20 A1IQT C14 C Y N 21 A1IQT C16 C Y N 22 A1IQT C18 C Y N 23 A1IQT C19 C Y N 24 A1IQT C2 C N N 25 A1IQT C23 C N N 26 A1IQT C25 C N N 27 A1IQT C27 C Y N 28 A1IQT C29 C Y N 29 A1IQT C3 C N S 30 A1IQT C30 C N N 31 A1IQT C31 C N N 32 A1IQT C32 C N N 33 A1IQT C33 C N N 34 A1IQT C9 C N N 35 A1IQT N2 N N N 36 A1IQT N4 N N N 37 A1IQT N5 N Y N 38 A1IQT N6 N N N 39 A1IQT N7 N Y N 40 A1IQT N8 N N N 41 A1IQT O1 O N N 42 A1IQT O2 O N N 43 A1IQT O3 O N N 44 A1IQT O4 O N N 45 A1IQT O5 O N N 46 A1IQT O6 O N N 47 A1IQT S1 S N N 48 A1IQT H3 H N N 49 A1IQT H4 H N N 50 A1IQT H5 H N N 51 A1IQT H6 H N N 52 A1IQT H8 H N N 53 A1IQT H10 H N N 54 A1IQT H9 H N N 55 A1IQT H11 H N N 56 A1IQT H12 H N N 57 A1IQT H16 H N N 58 A1IQT H15 H N N 59 A1IQT H18 H N N 60 A1IQT H20 H N N 61 A1IQT H24 H N N 62 A1IQT H27 H N N 63 A1IQT H28 H N N 64 A1IQT H31 H N N 65 A1IQT H19 H N N 66 A1IQT H21 H N N 67 A1IQT H22 H N N 68 A1IQT H2 H N N 69 A1IQT H1 H N N 70 A1IQT H25 H N N 71 A1IQT H26 H N N 72 A1IQT H29 H N N 73 A1IQT H30 H N N 74 A1IQT H32 H N N 75 A1IQT H33 H N N 76 A1IQT H35 H N N 77 A1IQT H34 H N N 78 A1IQT H37 H N N 79 A1IQT H36 H N N 80 A1IQT H38 H N N 81 A1IQT H39 H N N 82 A1IQT H13 H N N 83 A1IQT H14 H N N 84 A1IQT H7 H N N 85 A1IQT H17 H N N 86 A1IQT H23 H N N 87 A1IQT H40 H N N 88 ALA N N N N 89 ALA CA C N S 90 ALA C C N N 91 ALA O O N N 92 ALA CB C N N 93 ALA OXT O N N 94 ALA H H N N 95 ALA H2 H N N 96 ALA HA H N N 97 ALA HB1 H N N 98 ALA HB2 H N N 99 ALA HB3 H N N 100 ALA HXT H N N 101 ARG N N N N 102 ARG CA C N S 103 ARG C C N N 104 ARG O O N N 105 ARG CB C N N 106 ARG CG C N N 107 ARG CD C N N 108 ARG NE N N N 109 ARG CZ C N N 110 ARG NH1 N N N 111 ARG NH2 N N N 112 ARG OXT O N N 113 ARG H H N N 114 ARG H2 H N N 115 ARG HA H N N 116 ARG HB2 H N N 117 ARG HB3 H N N 118 ARG HG2 H N N 119 ARG HG3 H N N 120 ARG HD2 H N N 121 ARG HD3 H N N 122 ARG HE H N N 123 ARG HH11 H N N 124 ARG HH12 H N N 125 ARG HH21 H N N 126 ARG HH22 H N N 127 ARG HXT H N N 128 ASN N N N N 129 ASN CA C N S 130 ASN C C N N 131 ASN O O N N 132 ASN CB C N N 133 ASN CG C N N 134 ASN OD1 O N N 135 ASN ND2 N N N 136 ASN OXT O N N 137 ASN H H N N 138 ASN H2 H N N 139 ASN HA H N N 140 ASN HB2 H N N 141 ASN HB3 H N N 142 ASN HD21 H N N 143 ASN HD22 H N N 144 ASN HXT H N N 145 ASP N N N N 146 ASP CA C N S 147 ASP C C N N 148 ASP O O N N 149 ASP CB C N N 150 ASP CG C N N 151 ASP OD1 O N N 152 ASP OD2 O N N 153 ASP OXT O N N 154 ASP H H N N 155 ASP H2 H N N 156 ASP HA H N N 157 ASP HB2 H N N 158 ASP HB3 H N N 159 ASP HD2 H N N 160 ASP HXT H N N 161 CYS N N N N 162 CYS CA C N R 163 CYS C C N N 164 CYS O O N N 165 CYS CB C N N 166 CYS SG S N N 167 CYS OXT O N N 168 CYS H H N N 169 CYS H2 H N N 170 CYS HA H N N 171 CYS HB2 H N N 172 CYS HB3 H N N 173 CYS HG H N N 174 CYS HXT H N N 175 GLN N N N N 176 GLN CA C N S 177 GLN C C N N 178 GLN O O N N 179 GLN CB C N N 180 GLN CG C N N 181 GLN CD C N N 182 GLN OE1 O N N 183 GLN NE2 N N N 184 GLN OXT O N N 185 GLN H H N N 186 GLN H2 H N N 187 GLN HA H N N 188 GLN HB2 H N N 189 GLN HB3 H N N 190 GLN HG2 H N N 191 GLN HG3 H N N 192 GLN HE21 H N N 193 GLN HE22 H N N 194 GLN HXT H N N 195 GLU N N N N 196 GLU CA C N S 197 GLU C C N N 198 GLU O O N N 199 GLU CB C N N 200 GLU CG C N N 201 GLU CD C N N 202 GLU OE1 O N N 203 GLU OE2 O N N 204 GLU OXT O N N 205 GLU H H N N 206 GLU H2 H N N 207 GLU HA H N N 208 GLU HB2 H N N 209 GLU HB3 H N N 210 GLU HG2 H N N 211 GLU HG3 H N N 212 GLU HE2 H N N 213 GLU HXT H N N 214 GLY N N N N 215 GLY CA C N N 216 GLY C C N N 217 GLY O O N N 218 GLY OXT O N N 219 GLY H H N N 220 GLY H2 H N N 221 GLY HA2 H N N 222 GLY HA3 H N N 223 GLY HXT H N N 224 HIS N N N N 225 HIS CA C N S 226 HIS C C N N 227 HIS O O N N 228 HIS CB C N N 229 HIS CG C Y N 230 HIS ND1 N Y N 231 HIS CD2 C Y N 232 HIS CE1 C Y N 233 HIS NE2 N Y N 234 HIS OXT O N N 235 HIS H H N N 236 HIS H2 H N N 237 HIS HA H N N 238 HIS HB2 H N N 239 HIS HB3 H N N 240 HIS HD1 H N N 241 HIS HD2 H N N 242 HIS HE1 H N N 243 HIS HE2 H N N 244 HIS HXT H N N 245 ILE N N N N 246 ILE CA C N S 247 ILE C C N N 248 ILE O O N N 249 ILE CB C N S 250 ILE CG1 C N N 251 ILE CG2 C N N 252 ILE CD1 C N N 253 ILE OXT O N N 254 ILE H H N N 255 ILE H2 H N N 256 ILE HA H N N 257 ILE HB H N N 258 ILE HG12 H N N 259 ILE HG13 H N N 260 ILE HG21 H N N 261 ILE HG22 H N N 262 ILE HG23 H N N 263 ILE HD11 H N N 264 ILE HD12 H N N 265 ILE HD13 H N N 266 ILE HXT H N N 267 LEU N N N N 268 LEU CA C N S 269 LEU C C N N 270 LEU O O N N 271 LEU CB C N N 272 LEU CG C N N 273 LEU CD1 C N N 274 LEU CD2 C N N 275 LEU OXT O N N 276 LEU H H N N 277 LEU H2 H N N 278 LEU HA H N N 279 LEU HB2 H N N 280 LEU HB3 H N N 281 LEU HG H N N 282 LEU HD11 H N N 283 LEU HD12 H N N 284 LEU HD13 H N N 285 LEU HD21 H N N 286 LEU HD22 H N N 287 LEU HD23 H N N 288 LEU HXT H N N 289 LYS N N N N 290 LYS CA C N S 291 LYS C C N N 292 LYS O O N N 293 LYS CB C N N 294 LYS CG C N N 295 LYS CD C N N 296 LYS CE C N N 297 LYS NZ N N N 298 LYS OXT O N N 299 LYS H H N N 300 LYS H2 H N N 301 LYS HA H N N 302 LYS HB2 H N N 303 LYS HB3 H N N 304 LYS HG2 H N N 305 LYS HG3 H N N 306 LYS HD2 H N N 307 LYS HD3 H N N 308 LYS HE2 H N N 309 LYS HE3 H N N 310 LYS HZ1 H N N 311 LYS HZ2 H N N 312 LYS HZ3 H N N 313 LYS HXT H N N 314 MET N N N N 315 MET CA C N S 316 MET C C N N 317 MET O O N N 318 MET CB C N N 319 MET CG C N N 320 MET SD S N N 321 MET CE C N N 322 MET OXT O N N 323 MET H H N N 324 MET H2 H N N 325 MET HA H N N 326 MET HB2 H N N 327 MET HB3 H N N 328 MET HG2 H N N 329 MET HG3 H N N 330 MET HE1 H N N 331 MET HE2 H N N 332 MET HE3 H N N 333 MET HXT H N N 334 PHE N N N N 335 PHE CA C N S 336 PHE C C N N 337 PHE O O N N 338 PHE CB C N N 339 PHE CG C Y N 340 PHE CD1 C Y N 341 PHE CD2 C Y N 342 PHE CE1 C Y N 343 PHE CE2 C Y N 344 PHE CZ C Y N 345 PHE OXT O N N 346 PHE H H N N 347 PHE H2 H N N 348 PHE HA H N N 349 PHE HB2 H N N 350 PHE HB3 H N N 351 PHE HD1 H N N 352 PHE HD2 H N N 353 PHE HE1 H N N 354 PHE HE2 H N N 355 PHE HZ H N N 356 PHE HXT H N N 357 PRO N N N N 358 PRO CA C N S 359 PRO C C N N 360 PRO O O N N 361 PRO CB C N N 362 PRO CG C N N 363 PRO CD C N N 364 PRO OXT O N N 365 PRO H H N N 366 PRO HA H N N 367 PRO HB2 H N N 368 PRO HB3 H N N 369 PRO HG2 H N N 370 PRO HG3 H N N 371 PRO HD2 H N N 372 PRO HD3 H N N 373 PRO HXT H N N 374 SER N N N N 375 SER CA C N S 376 SER C C N N 377 SER O O N N 378 SER CB C N N 379 SER OG O N N 380 SER OXT O N N 381 SER H H N N 382 SER H2 H N N 383 SER HA H N N 384 SER HB2 H N N 385 SER HB3 H N N 386 SER HG H N N 387 SER HXT H N N 388 THR N N N N 389 THR CA C N S 390 THR C C N N 391 THR O O N N 392 THR CB C N R 393 THR OG1 O N N 394 THR CG2 C N N 395 THR OXT O N N 396 THR H H N N 397 THR H2 H N N 398 THR HA H N N 399 THR HB H N N 400 THR HG1 H N N 401 THR HG21 H N N 402 THR HG22 H N N 403 THR HG23 H N N 404 THR HXT H N N 405 TRP N N N N 406 TRP CA C N S 407 TRP C C N N 408 TRP O O N N 409 TRP CB C N N 410 TRP CG C Y N 411 TRP CD1 C Y N 412 TRP CD2 C Y N 413 TRP NE1 N Y N 414 TRP CE2 C Y N 415 TRP CE3 C Y N 416 TRP CZ2 C Y N 417 TRP CZ3 C Y N 418 TRP CH2 C Y N 419 TRP OXT O N N 420 TRP H H N N 421 TRP H2 H N N 422 TRP HA H N N 423 TRP HB2 H N N 424 TRP HB3 H N N 425 TRP HD1 H N N 426 TRP HE1 H N N 427 TRP HE3 H N N 428 TRP HZ2 H N N 429 TRP HZ3 H N N 430 TRP HH2 H N N 431 TRP HXT H N N 432 TYR N N N N 433 TYR CA C N S 434 TYR C C N N 435 TYR O O N N 436 TYR CB C N N 437 TYR CG C Y N 438 TYR CD1 C Y N 439 TYR CD2 C Y N 440 TYR CE1 C Y N 441 TYR CE2 C Y N 442 TYR CZ C Y N 443 TYR OH O N N 444 TYR OXT O N N 445 TYR H H N N 446 TYR H2 H N N 447 TYR HA H N N 448 TYR HB2 H N N 449 TYR HB3 H N N 450 TYR HD1 H N N 451 TYR HD2 H N N 452 TYR HE1 H N N 453 TYR HE2 H N N 454 TYR HH H N N 455 TYR HXT H N N 456 VAL N N N N 457 VAL CA C N S 458 VAL C C N N 459 VAL O O N N 460 VAL CB C N N 461 VAL CG1 C N N 462 VAL CG2 C N N 463 VAL OXT O N N 464 VAL H H N N 465 VAL H2 H N N 466 VAL HA H N N 467 VAL HB H N N 468 VAL HG11 H N N 469 VAL HG12 H N N 470 VAL HG13 H N N 471 VAL HG21 H N N 472 VAL HG22 H N N 473 VAL HG23 H N N 474 VAL HXT H N N 475 ZN ZN ZN N N 476 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1IQT O1 C1 doub N N 1 A1IQT C1 C2 sing N N 2 A1IQT C2 C3 sing N N 3 A1IQT C3 C4 sing N N 4 A1IQT C4 C5 sing N N 5 A1IQT C5 N1 sing N N 6 A1IQT N1 S1 sing N N 7 A1IQT S1 O2 doub N N 8 A1IQT S1 O3 doub N N 9 A1IQT S1 N2 sing N N 10 A1IQT N2 C6 sing N N 11 A1IQT C6 C7 sing N N 12 A1IQT C7 C8 sing N N 13 A1IQT C8 N3 sing N N 14 A1IQT N3 C9 sing N N 15 A1IQT C9 C10 sing N N 16 A1IQT C10 N4 sing N N 17 A1IQT N4 C11 sing N N 18 A1IQT C11 O4 doub N N 19 A1IQT C11 C12 sing N N 20 A1IQT C12 C13 doub Y N 21 A1IQT C13 C14 sing Y N 22 A1IQT C14 C15 doub Y N 23 A1IQT C15 C16 sing Y N 24 A1IQT C16 C17 sing N N 25 A1IQT C17 C18 doub Y N 26 A1IQT C18 N5 sing Y N 27 A1IQT N5 C19 sing Y N 28 A1IQT C19 C20 doub Y N 29 A1IQT C20 C21 sing N N 30 A1IQT C21 O5 doub N N 31 A1IQT C21 N6 sing N N 32 A1IQT N6 C22 sing N N 33 A1IQT C22 C23 sing N N 34 A1IQT C23 C24 sing N N 35 A1IQT C24 C25 sing N N 36 A1IQT C20 C26 sing Y N 37 A1IQT C26 C27 doub Y N 38 A1IQT C27 C28 sing Y N 39 A1IQT C28 N7 doub Y N 40 A1IQT C16 C29 doub Y N 41 A1IQT N3 C30 sing N N 42 A1IQT C30 C31 sing N N 43 A1IQT N1 C32 sing N N 44 A1IQT C3 C33 sing N N 45 A1IQT C33 O6 doub N N 46 A1IQT C33 N8 sing N N 47 A1IQT C1 N8 sing N N 48 A1IQT C3 C32 sing N N 49 A1IQT C6 C31 sing N N 50 A1IQT C12 C29 sing Y N 51 A1IQT C17 N7 sing Y N 52 A1IQT N5 C28 sing Y N 53 A1IQT C22 C25 sing N N 54 A1IQT C4 H3 sing N N 55 A1IQT C4 H4 sing N N 56 A1IQT C5 H5 sing N N 57 A1IQT C5 H6 sing N N 58 A1IQT C6 H8 sing N N 59 A1IQT C7 H10 sing N N 60 A1IQT C7 H9 sing N N 61 A1IQT C8 H11 sing N N 62 A1IQT C8 H12 sing N N 63 A1IQT C10 H16 sing N N 64 A1IQT C10 H15 sing N N 65 A1IQT C13 H18 sing N N 66 A1IQT C15 H20 sing N N 67 A1IQT C22 H24 sing N N 68 A1IQT C24 H27 sing N N 69 A1IQT C24 H28 sing N N 70 A1IQT C26 H31 sing N N 71 A1IQT C14 H19 sing N N 72 A1IQT C18 H21 sing N N 73 A1IQT C19 H22 sing N N 74 A1IQT C2 H2 sing N N 75 A1IQT C2 H1 sing N N 76 A1IQT C23 H25 sing N N 77 A1IQT C23 H26 sing N N 78 A1IQT C25 H29 sing N N 79 A1IQT C25 H30 sing N N 80 A1IQT C27 H32 sing N N 81 A1IQT C29 H33 sing N N 82 A1IQT C30 H35 sing N N 83 A1IQT C30 H34 sing N N 84 A1IQT C31 H37 sing N N 85 A1IQT C31 H36 sing N N 86 A1IQT C32 H38 sing N N 87 A1IQT C32 H39 sing N N 88 A1IQT C9 H13 sing N N 89 A1IQT C9 H14 sing N N 90 A1IQT N2 H7 sing N N 91 A1IQT N4 H17 sing N N 92 A1IQT N6 H23 sing N N 93 A1IQT N8 H40 sing N N 94 ALA N CA sing N N 95 ALA N H sing N N 96 ALA N H2 sing N N 97 ALA CA C sing N N 98 ALA CA CB sing N N 99 ALA CA HA sing N N 100 ALA C O doub N N 101 ALA C OXT sing N N 102 ALA CB HB1 sing N N 103 ALA CB HB2 sing N N 104 ALA CB HB3 sing N N 105 ALA OXT HXT sing N N 106 ARG N CA sing N N 107 ARG N H sing N N 108 ARG N H2 sing N N 109 ARG CA C sing N N 110 ARG CA CB sing N N 111 ARG CA HA sing N N 112 ARG C O doub N N 113 ARG C OXT sing N N 114 ARG CB CG sing N N 115 ARG CB HB2 sing N N 116 ARG CB HB3 sing N N 117 ARG CG CD sing N N 118 ARG CG HG2 sing N N 119 ARG CG HG3 sing N N 120 ARG CD NE sing N N 121 ARG CD HD2 sing N N 122 ARG CD HD3 sing N N 123 ARG NE CZ sing N N 124 ARG NE HE sing N N 125 ARG CZ NH1 sing N N 126 ARG CZ NH2 doub N N 127 ARG NH1 HH11 sing N N 128 ARG NH1 HH12 sing N N 129 ARG NH2 HH21 sing N N 130 ARG NH2 HH22 sing N N 131 ARG OXT HXT sing N N 132 ASN N CA sing N N 133 ASN N H sing N N 134 ASN N H2 sing N N 135 ASN CA C sing N N 136 ASN CA CB sing N N 137 ASN CA HA sing N N 138 ASN C O doub N N 139 ASN C OXT sing N N 140 ASN CB CG sing N N 141 ASN CB HB2 sing N N 142 ASN CB HB3 sing N N 143 ASN CG OD1 doub N N 144 ASN CG ND2 sing N N 145 ASN ND2 HD21 sing N N 146 ASN ND2 HD22 sing N N 147 ASN OXT HXT sing N N 148 ASP N CA sing N N 149 ASP N H sing N N 150 ASP N H2 sing N N 151 ASP CA C sing N N 152 ASP CA CB sing N N 153 ASP CA HA sing N N 154 ASP C O doub N N 155 ASP C OXT sing N N 156 ASP CB CG sing N N 157 ASP CB HB2 sing N N 158 ASP CB HB3 sing N N 159 ASP CG OD1 doub N N 160 ASP CG OD2 sing N N 161 ASP OD2 HD2 sing N N 162 ASP OXT HXT sing N N 163 CYS N CA sing N N 164 CYS N H sing N N 165 CYS N H2 sing N N 166 CYS CA C sing N N 167 CYS CA CB sing N N 168 CYS CA HA sing N N 169 CYS C O doub N N 170 CYS C OXT sing N N 171 CYS CB SG sing N N 172 CYS CB HB2 sing N N 173 CYS CB HB3 sing N N 174 CYS SG HG sing N N 175 CYS OXT HXT sing N N 176 GLN N CA sing N N 177 GLN N H sing N N 178 GLN N H2 sing N N 179 GLN CA C sing N N 180 GLN CA CB sing N N 181 GLN CA HA sing N N 182 GLN C O doub N N 183 GLN C OXT sing N N 184 GLN CB CG sing N N 185 GLN CB HB2 sing N N 186 GLN CB HB3 sing N N 187 GLN CG CD sing N N 188 GLN CG HG2 sing N N 189 GLN CG HG3 sing N N 190 GLN CD OE1 doub N N 191 GLN CD NE2 sing N N 192 GLN NE2 HE21 sing N N 193 GLN NE2 HE22 sing N N 194 GLN OXT HXT sing N N 195 GLU N CA sing N N 196 GLU N H sing N N 197 GLU N H2 sing N N 198 GLU CA C sing N N 199 GLU CA CB sing N N 200 GLU CA HA sing N N 201 GLU C O doub N N 202 GLU C OXT sing N N 203 GLU CB CG sing N N 204 GLU CB HB2 sing N N 205 GLU CB HB3 sing N N 206 GLU CG CD sing N N 207 GLU CG HG2 sing N N 208 GLU CG HG3 sing N N 209 GLU CD OE1 doub N N 210 GLU CD OE2 sing N N 211 GLU OE2 HE2 sing N N 212 GLU OXT HXT sing N N 213 GLY N CA sing N N 214 GLY N H sing N N 215 GLY N H2 sing N N 216 GLY CA C sing N N 217 GLY CA HA2 sing N N 218 GLY CA HA3 sing N N 219 GLY C O doub N N 220 GLY C OXT sing N N 221 GLY OXT HXT sing N N 222 HIS N CA sing N N 223 HIS N H sing N N 224 HIS N H2 sing N N 225 HIS CA C sing N N 226 HIS CA CB sing N N 227 HIS CA HA sing N N 228 HIS C O doub N N 229 HIS C OXT sing N N 230 HIS CB CG sing N N 231 HIS CB HB2 sing N N 232 HIS CB HB3 sing N N 233 HIS CG ND1 sing Y N 234 HIS CG CD2 doub Y N 235 HIS ND1 CE1 doub Y N 236 HIS ND1 HD1 sing N N 237 HIS CD2 NE2 sing Y N 238 HIS CD2 HD2 sing N N 239 HIS CE1 NE2 sing Y N 240 HIS CE1 HE1 sing N N 241 HIS NE2 HE2 sing N N 242 HIS OXT HXT sing N N 243 ILE N CA sing N N 244 ILE N H sing N N 245 ILE N H2 sing N N 246 ILE CA C sing N N 247 ILE CA CB sing N N 248 ILE CA HA sing N N 249 ILE C O doub N N 250 ILE C OXT sing N N 251 ILE CB CG1 sing N N 252 ILE CB CG2 sing N N 253 ILE CB HB sing N N 254 ILE CG1 CD1 sing N N 255 ILE CG1 HG12 sing N N 256 ILE CG1 HG13 sing N N 257 ILE CG2 HG21 sing N N 258 ILE CG2 HG22 sing N N 259 ILE CG2 HG23 sing N N 260 ILE CD1 HD11 sing N N 261 ILE CD1 HD12 sing N N 262 ILE CD1 HD13 sing N N 263 ILE OXT HXT sing N N 264 LEU N CA sing N N 265 LEU N H sing N N 266 LEU N H2 sing N N 267 LEU CA C sing N N 268 LEU CA CB sing N N 269 LEU CA HA sing N N 270 LEU C O doub N N 271 LEU C OXT sing N N 272 LEU CB CG sing N N 273 LEU CB HB2 sing N N 274 LEU CB HB3 sing N N 275 LEU CG CD1 sing N N 276 LEU CG CD2 sing N N 277 LEU CG HG sing N N 278 LEU CD1 HD11 sing N N 279 LEU CD1 HD12 sing N N 280 LEU CD1 HD13 sing N N 281 LEU CD2 HD21 sing N N 282 LEU CD2 HD22 sing N N 283 LEU CD2 HD23 sing N N 284 LEU OXT HXT sing N N 285 LYS N CA sing N N 286 LYS N H sing N N 287 LYS N H2 sing N N 288 LYS CA C sing N N 289 LYS CA CB sing N N 290 LYS CA HA sing N N 291 LYS C O doub N N 292 LYS C OXT sing N N 293 LYS CB CG sing N N 294 LYS CB HB2 sing N N 295 LYS CB HB3 sing N N 296 LYS CG CD sing N N 297 LYS CG HG2 sing N N 298 LYS CG HG3 sing N N 299 LYS CD CE sing N N 300 LYS CD HD2 sing N N 301 LYS CD HD3 sing N N 302 LYS CE NZ sing N N 303 LYS CE HE2 sing N N 304 LYS CE HE3 sing N N 305 LYS NZ HZ1 sing N N 306 LYS NZ HZ2 sing N N 307 LYS NZ HZ3 sing N N 308 LYS OXT HXT sing N N 309 MET N CA sing N N 310 MET N H sing N N 311 MET N H2 sing N N 312 MET CA C sing N N 313 MET CA CB sing N N 314 MET CA HA sing N N 315 MET C O doub N N 316 MET C OXT sing N N 317 MET CB CG sing N N 318 MET CB HB2 sing N N 319 MET CB HB3 sing N N 320 MET CG SD sing N N 321 MET CG HG2 sing N N 322 MET CG HG3 sing N N 323 MET SD CE sing N N 324 MET CE HE1 sing N N 325 MET CE HE2 sing N N 326 MET CE HE3 sing N N 327 MET OXT HXT sing N N 328 PHE N CA sing N N 329 PHE N H sing N N 330 PHE N H2 sing N N 331 PHE CA C sing N N 332 PHE CA CB sing N N 333 PHE CA HA sing N N 334 PHE C O doub N N 335 PHE C OXT sing N N 336 PHE CB CG sing N N 337 PHE CB HB2 sing N N 338 PHE CB HB3 sing N N 339 PHE CG CD1 doub Y N 340 PHE CG CD2 sing Y N 341 PHE CD1 CE1 sing Y N 342 PHE CD1 HD1 sing N N 343 PHE CD2 CE2 doub Y N 344 PHE CD2 HD2 sing N N 345 PHE CE1 CZ doub Y N 346 PHE CE1 HE1 sing N N 347 PHE CE2 CZ sing Y N 348 PHE CE2 HE2 sing N N 349 PHE CZ HZ sing N N 350 PHE OXT HXT sing N N 351 PRO N CA sing N N 352 PRO N CD sing N N 353 PRO N H sing N N 354 PRO CA C sing N N 355 PRO CA CB sing N N 356 PRO CA HA sing N N 357 PRO C O doub N N 358 PRO C OXT sing N N 359 PRO CB CG sing N N 360 PRO CB HB2 sing N N 361 PRO CB HB3 sing N N 362 PRO CG CD sing N N 363 PRO CG HG2 sing N N 364 PRO CG HG3 sing N N 365 PRO CD HD2 sing N N 366 PRO CD HD3 sing N N 367 PRO OXT HXT sing N N 368 SER N CA sing N N 369 SER N H sing N N 370 SER N H2 sing N N 371 SER CA C sing N N 372 SER CA CB sing N N 373 SER CA HA sing N N 374 SER C O doub N N 375 SER C OXT sing N N 376 SER CB OG sing N N 377 SER CB HB2 sing N N 378 SER CB HB3 sing N N 379 SER OG HG sing N N 380 SER OXT HXT sing N N 381 THR N CA sing N N 382 THR N H sing N N 383 THR N H2 sing N N 384 THR CA C sing N N 385 THR CA CB sing N N 386 THR CA HA sing N N 387 THR C O doub N N 388 THR C OXT sing N N 389 THR CB OG1 sing N N 390 THR CB CG2 sing N N 391 THR CB HB sing N N 392 THR OG1 HG1 sing N N 393 THR CG2 HG21 sing N N 394 THR CG2 HG22 sing N N 395 THR CG2 HG23 sing N N 396 THR OXT HXT sing N N 397 TRP N CA sing N N 398 TRP N H sing N N 399 TRP N H2 sing N N 400 TRP CA C sing N N 401 TRP CA CB sing N N 402 TRP CA HA sing N N 403 TRP C O doub N N 404 TRP C OXT sing N N 405 TRP CB CG sing N N 406 TRP CB HB2 sing N N 407 TRP CB HB3 sing N N 408 TRP CG CD1 doub Y N 409 TRP CG CD2 sing Y N 410 TRP CD1 NE1 sing Y N 411 TRP CD1 HD1 sing N N 412 TRP CD2 CE2 doub Y N 413 TRP CD2 CE3 sing Y N 414 TRP NE1 CE2 sing Y N 415 TRP NE1 HE1 sing N N 416 TRP CE2 CZ2 sing Y N 417 TRP CE3 CZ3 doub Y N 418 TRP CE3 HE3 sing N N 419 TRP CZ2 CH2 doub Y N 420 TRP CZ2 HZ2 sing N N 421 TRP CZ3 CH2 sing Y N 422 TRP CZ3 HZ3 sing N N 423 TRP CH2 HH2 sing N N 424 TRP OXT HXT sing N N 425 TYR N CA sing N N 426 TYR N H sing N N 427 TYR N H2 sing N N 428 TYR CA C sing N N 429 TYR CA CB sing N N 430 TYR CA HA sing N N 431 TYR C O doub N N 432 TYR C OXT sing N N 433 TYR CB CG sing N N 434 TYR CB HB2 sing N N 435 TYR CB HB3 sing N N 436 TYR CG CD1 doub Y N 437 TYR CG CD2 sing Y N 438 TYR CD1 CE1 sing Y N 439 TYR CD1 HD1 sing N N 440 TYR CD2 CE2 doub Y N 441 TYR CD2 HD2 sing N N 442 TYR CE1 CZ doub Y N 443 TYR CE1 HE1 sing N N 444 TYR CE2 CZ sing Y N 445 TYR CE2 HE2 sing N N 446 TYR CZ OH sing N N 447 TYR OH HH sing N N 448 TYR OXT HXT sing N N 449 VAL N CA sing N N 450 VAL N H sing N N 451 VAL N H2 sing N N 452 VAL CA C sing N N 453 VAL CA CB sing N N 454 VAL CA HA sing N N 455 VAL C O doub N N 456 VAL C OXT sing N N 457 VAL CB CG1 sing N N 458 VAL CB CG2 sing N N 459 VAL CB HB sing N N 460 VAL CG1 HG11 sing N N 461 VAL CG1 HG12 sing N N 462 VAL CG1 HG13 sing N N 463 VAL CG2 HG21 sing N N 464 VAL CG2 HG22 sing N N 465 VAL CG2 HG23 sing N N 466 VAL OXT HXT sing N N 467 # _em_admin.current_status REL _em_admin.deposition_date 2024-10-04 _em_admin.deposition_site RCSB _em_admin.entry_id 9DUR _em_admin.last_update 2025-11-19 _em_admin.map_release_date 2025-11-19 _em_admin.title 'Cryo-EM Structure of CRBN:dHTC1:ENL YEATS' # loop_ _em_buffer_component.buffer_id _em_buffer_component.concentration _em_buffer_component.concentration_units _em_buffer_component.formula _em_buffer_component.id _em_buffer_component.name 1 30 mM C8H18N2O4S 1 HEPES 1 150 mM NaCl 2 'Sodium chloride' # _em_ctf_correction.details ? _em_ctf_correction.em_image_processing_id 1 _em_ctf_correction.id 1 _em_ctf_correction.type 'PHASE FLIPPING AND AMPLITUDE CORRECTION' # loop_ _em_entity_assembly_molwt.entity_assembly_id _em_entity_assembly_molwt.experimental_flag _em_entity_assembly_molwt.id _em_entity_assembly_molwt.units _em_entity_assembly_molwt.value 1 NO 1 MEGADALTONS 0.169 2 NO 2 MEGADALTONS 0.0182 3 NO 3 MEGADALTONS 0.151 # loop_ _em_entity_assembly_naturalsource.cell _em_entity_assembly_naturalsource.cellular_location _em_entity_assembly_naturalsource.entity_assembly_id _em_entity_assembly_naturalsource.id _em_entity_assembly_naturalsource.ncbi_tax_id _em_entity_assembly_naturalsource.organism _em_entity_assembly_naturalsource.organelle _em_entity_assembly_naturalsource.organ _em_entity_assembly_naturalsource.strain _em_entity_assembly_naturalsource.tissue _em_entity_assembly_naturalsource.details ? ? 2 3 9606 'Homo sapiens' ? ? ? ? ? ? ? 3 4 9606 'Homo sapiens' ? ? ? ? ? # loop_ _em_entity_assembly_recombinant.cell _em_entity_assembly_recombinant.entity_assembly_id _em_entity_assembly_recombinant.id _em_entity_assembly_recombinant.ncbi_tax_id _em_entity_assembly_recombinant.organism _em_entity_assembly_recombinant.plasmid _em_entity_assembly_recombinant.strain ? 2 3 37762 'Escherichia coli B' ? ? ? 3 4 7111 'Trichoplusia ni' ? ? # _em_image_processing.details ? _em_image_processing.id 1 _em_image_processing.image_recording_id 1 # _em_image_recording.average_exposure_time 2.87 _em_image_recording.avg_electron_dose_per_subtomogram ? _em_image_recording.avg_electron_dose_per_image 52.0 _em_image_recording.details ? _em_image_recording.detector_mode ? _em_image_recording.film_or_detector_model 'TFS FALCON 4i (4k x 4k)' _em_image_recording.id 1 _em_image_recording.imaging_id 1 _em_image_recording.num_diffraction_images ? _em_image_recording.num_grids_imaged 2 _em_image_recording.num_real_images 22883 # _em_imaging_optics.chr_aberration_corrector ? _em_imaging_optics.energyfilter_lower ? _em_imaging_optics.energyfilter_slit_width 10 _em_imaging_optics.energyfilter_name 'TFS Selectris' _em_imaging_optics.energyfilter_upper ? _em_imaging_optics.id 1 _em_imaging_optics.imaging_id 1 _em_imaging_optics.phase_plate ? _em_imaging_optics.sph_aberration_corrector ? _em_imaging_optics.details ? # _em_particle_selection.details ? _em_particle_selection.id 1 _em_particle_selection.image_processing_id 1 _em_particle_selection.method ? _em_particle_selection.num_particles_selected 9955887 _em_particle_selection.reference_model ? # loop_ _em_software.category _em_software.details _em_software.id _em_software.image_processing_id _em_software.fitting_id _em_software.imaging_id _em_software.name _em_software.version 'PARTICLE SELECTION' ? 1 1 ? ? Topaz 0.2.5a 'IMAGE ACQUISITION' ? 2 ? ? 1 EPU 3.7 MASKING ? 3 ? ? ? ? ? 'CTF CORRECTION' ? 4 1 ? ? cryoSPARC 4.5.3 'LAYERLINE INDEXING' ? 5 ? ? ? ? ? 'DIFFRACTION INDEXING' ? 6 ? ? ? ? ? 'MODEL FITTING' ? 7 ? 1 ? ISOLDE 1.6.0 'MODEL FITTING' ? 8 ? 1 ? Coot 0.9.8.0 'MODEL FITTING' ? 9 ? 1 ? 'UCSF ChimeraX' 1.6.1 'MODEL FITTING' ? 10 ? 1 ? Rosetta 3.13 OTHER ? 11 ? ? ? ? ? 'INITIAL EULER ASSIGNMENT' ? 12 1 ? ? cryoSPARC 4.5.3 'FINAL EULER ASSIGNMENT' ? 13 1 ? ? cryoSPARC 4.5.3 CLASSIFICATION ? 14 1 ? ? cryoSPARC 4.5.3 RECONSTRUCTION ? 15 1 ? ? cryoSPARC 4.5.3 'MODEL REFINEMENT' ? 16 ? 1 ? PHENIX 1.19.2-4158 # _em_specimen.concentration ? _em_specimen.details ;Particles from two grids were merged for this data set. The grids differed in protein concentration. Grid1: DDB1dB/CRBN:dHTC1:ENL YEATS of 1.4, 14, 2.8 uM Grid2: DDB1dB/CRBN:dHTC1:ENL YEATS of 1.6, 16, 3.2 uM ; _em_specimen.embedding_applied NO _em_specimen.experiment_id 1 _em_specimen.id 1 _em_specimen.shadowing_applied NO _em_specimen.staining_applied NO _em_specimen.vitrification_applied YES # _pdbx_audit_support.funding_organization 'National Institutes of Health/National Cancer Institute (NIH/NCI)' _pdbx_audit_support.country 'United States' _pdbx_audit_support.grant_number R01CA214608 _pdbx_audit_support.ordinal 1 # loop_ _pdbx_initial_refinement_model.id _pdbx_initial_refinement_model.type _pdbx_initial_refinement_model.source_name _pdbx_initial_refinement_model.accession_code 1 'experimental model' PDB 8tnq 2 'experimental model' PDB 6phy # _space_group.crystal_system triclinic _space_group.name_H-M_alt 'P 1' _space_group.IT_number 1 _space_group.name_Hall 'P 1' _space_group.id 1 # _atom_sites.entry_id 9DUR _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.Cartn_transform_axes ? _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C H N O S ZN # loop_ #