HEADER TRANSFERASE 05-OCT-24 9DV9 TITLE THE AMP-BOUND STRUCTURE OF ACKA FROM TREPONEMA VINCENTII COMPND MOL_ID: 1; COMPND 2 MOLECULE: ACETATE KINASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: ACETOKINASE; COMPND 5 EC: 2.7.2.1; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: TREPONEMA PALLIDUM; SOURCE 3 ORGANISM_TAXID: 160; SOURCE 4 GENE: ACKA, TREVI0001_0924; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS ACETATE KINASE, ORAL PATHOGEN, AMP, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR C.A.BRAUTIGAM,R.K.DEKA REVDAT 1 22-JAN-25 9DV9 0 JRNL AUTH R.K.DEKA,S.C.TSO,W.Z.LIU,C.A.BRAUTIGAM JRNL TITL BIOPHYSICAL AND BIOCHEMICAL EVIDENCE FOR THE ROLE OF ACETATE JRNL TITL 2 KINASES (ACKAS) IN AN ACETOGENIC PATHWAY IN PATHOGENIC JRNL TITL 3 SPIROCHETES. JRNL REF PLOS ONE V. 20 12642 2025 JRNL REFN ESSN 1932-6203 JRNL PMID 39787173 JRNL DOI 10.1371/JOURNAL.PONE.0312642 REMARK 2 REMARK 2 RESOLUTION. 1.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.20.1_4487 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 23.06 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.380 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.0 REMARK 3 NUMBER OF REFLECTIONS : 120366 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.142 REMARK 3 R VALUE (WORKING SET) : 0.140 REMARK 3 FREE R VALUE : 0.162 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 6136 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 23.0600 - 4.0300 0.97 4004 196 0.1577 0.1691 REMARK 3 2 4.0300 - 3.2000 0.95 3803 190 0.1469 0.1586 REMARK 3 3 3.2000 - 2.7900 0.99 3897 182 0.1499 0.1765 REMARK 3 4 2.7900 - 2.5400 0.99 3835 225 0.1427 0.1723 REMARK 3 5 2.5400 - 2.3600 0.99 3828 237 0.1360 0.1595 REMARK 3 6 2.3600 - 2.2200 1.00 3853 207 0.1287 0.1351 REMARK 3 7 2.2200 - 2.1100 1.00 3824 221 0.1291 0.1654 REMARK 3 8 2.1100 - 2.0200 1.00 3859 196 0.1280 0.1310 REMARK 3 9 2.0200 - 1.9400 0.98 3750 212 0.1287 0.1409 REMARK 3 10 1.9400 - 1.8700 0.99 3810 205 0.1256 0.1507 REMARK 3 11 1.8700 - 1.8100 0.99 3819 179 0.1277 0.1601 REMARK 3 12 1.8100 - 1.7600 1.00 3817 197 0.1245 0.1499 REMARK 3 13 1.7600 - 1.7100 1.00 3850 207 0.1250 0.1524 REMARK 3 14 1.7100 - 1.6700 1.00 3799 210 0.1221 0.1460 REMARK 3 15 1.6700 - 1.6400 1.00 3794 193 0.1199 0.1556 REMARK 3 16 1.6400 - 1.6000 1.00 3787 232 0.1195 0.1408 REMARK 3 17 1.6000 - 1.5700 1.00 3836 199 0.1172 0.1486 REMARK 3 18 1.5700 - 1.5400 1.00 3793 237 0.1223 0.1583 REMARK 3 19 1.5400 - 1.5100 1.00 3782 200 0.1230 0.1470 REMARK 3 20 1.5100 - 1.4900 1.00 3826 193 0.1234 0.1548 REMARK 3 21 1.4900 - 1.4600 1.00 3755 218 0.1310 0.1481 REMARK 3 22 1.4600 - 1.4400 0.99 3822 185 0.1462 0.1956 REMARK 3 23 1.4400 - 1.4200 0.99 3754 202 0.1566 0.1781 REMARK 3 24 1.4200 - 1.4000 1.00 3813 205 0.1597 0.2086 REMARK 3 25 1.4000 - 1.3800 1.00 3793 207 0.1624 0.2051 REMARK 3 26 1.3800 - 1.3600 1.00 3757 208 0.1680 0.1987 REMARK 3 27 1.3600 - 1.3400 1.00 3813 218 0.1709 0.2281 REMARK 3 28 1.3400 - 1.3300 0.99 3811 185 0.1855 0.2435 REMARK 3 29 1.3300 - 1.3100 1.00 3772 204 0.1955 0.2303 REMARK 3 30 1.3100 - 1.3000 0.94 3574 186 0.2086 0.2387 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.103 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 14.657 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 12.59 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 19.32 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 3807 REMARK 3 ANGLE : 0.970 5186 REMARK 3 CHIRALITY : 0.080 574 REMARK 3 PLANARITY : 0.008 675 REMARK 3 DIHEDRAL : 13.449 1433 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 9DV9 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 07-OCT-24. REMARK 100 THE DEPOSITION ID IS D_1000288905. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 07-DEC-23 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL12-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97946 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 120425 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.300 REMARK 200 RESOLUTION RANGE LOW (A) : 23.100 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.1 REMARK 200 DATA REDUNDANCY : 4.300 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 29.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.32 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.19 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.33 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M AMMONIUM SULFATE 0.1 M BIS-TRIS REMARK 280 PH 5.5 25% (W/V) PEG3350, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 44.05100 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 52.61600 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 44.05100 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 52.61600 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 105.23200 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 3 0.000000 -1.000000 0.000000 105.23000 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -25 REMARK 465 GLY A -24 REMARK 465 SER A -23 REMARK 465 ASP A -22 REMARK 465 LYS A -21 REMARK 465 ILE A -20 REMARK 465 HIS A -19 REMARK 465 HIS A -18 REMARK 465 HIS A -17 REMARK 465 HIS A -16 REMARK 465 HIS A -15 REMARK 465 HIS A -14 REMARK 465 ASP A -13 REMARK 465 TYR A -12 REMARK 465 ASP A -11 REMARK 465 ILE A -10 REMARK 465 PRO A -9 REMARK 465 THR A -8 REMARK 465 THR A -7 REMARK 465 GLU A -6 REMARK 465 ASN A -5 REMARK 465 LEU A -4 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 OH TYR A -3 OE2 GLU A 157 3545 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 MET A 1 69.09 -105.13 REMARK 500 MET A 1 77.52 -104.63 REMARK 500 HIS A 123 -45.86 -136.72 REMARK 500 SER A 272 -153.26 -111.06 REMARK 500 GLN A 280 -17.33 -161.30 REMARK 500 ALA A 331 -177.48 66.04 REMARK 500 ASP A 387 69.52 -154.29 REMARK 500 ASP A 387 70.33 -154.29 REMARK 500 REMARK 500 REMARK: NULL DBREF 9DV9 A 1 449 UNP C8PR54 C8PR54_9SPIR 1 449 SEQADV 9DV9 MET A -25 UNP C8PR54 EXPRESSION TAG SEQADV 9DV9 GLY A -24 UNP C8PR54 EXPRESSION TAG SEQADV 9DV9 SER A -23 UNP C8PR54 EXPRESSION TAG SEQADV 9DV9 ASP A -22 UNP C8PR54 EXPRESSION TAG SEQADV 9DV9 LYS A -21 UNP C8PR54 EXPRESSION TAG SEQADV 9DV9 ILE A -20 UNP C8PR54 EXPRESSION TAG SEQADV 9DV9 HIS A -19 UNP C8PR54 EXPRESSION TAG SEQADV 9DV9 HIS A -18 UNP C8PR54 EXPRESSION TAG SEQADV 9DV9 HIS A -17 UNP C8PR54 EXPRESSION TAG SEQADV 9DV9 HIS A -16 UNP C8PR54 EXPRESSION TAG SEQADV 9DV9 HIS A -15 UNP C8PR54 EXPRESSION TAG SEQADV 9DV9 HIS A -14 UNP C8PR54 EXPRESSION TAG SEQADV 9DV9 ASP A -13 UNP C8PR54 EXPRESSION TAG SEQADV 9DV9 TYR A -12 UNP C8PR54 EXPRESSION TAG SEQADV 9DV9 ASP A -11 UNP C8PR54 EXPRESSION TAG SEQADV 9DV9 ILE A -10 UNP C8PR54 EXPRESSION TAG SEQADV 9DV9 PRO A -9 UNP C8PR54 EXPRESSION TAG SEQADV 9DV9 THR A -8 UNP C8PR54 EXPRESSION TAG SEQADV 9DV9 THR A -7 UNP C8PR54 EXPRESSION TAG SEQADV 9DV9 GLU A -6 UNP C8PR54 EXPRESSION TAG SEQADV 9DV9 ASN A -5 UNP C8PR54 EXPRESSION TAG SEQADV 9DV9 LEU A -4 UNP C8PR54 EXPRESSION TAG SEQADV 9DV9 TYR A -3 UNP C8PR54 EXPRESSION TAG SEQADV 9DV9 PHE A -2 UNP C8PR54 EXPRESSION TAG SEQADV 9DV9 GLN A -1 UNP C8PR54 EXPRESSION TAG SEQADV 9DV9 GLY A 0 UNP C8PR54 EXPRESSION TAG SEQADV 9DV9 ASN A 418 UNP C8PR54 ASP 418 CLONING ARTIFACT SEQRES 1 A 475 MET GLY SER ASP LYS ILE HIS HIS HIS HIS HIS HIS ASP SEQRES 2 A 475 TYR ASP ILE PRO THR THR GLU ASN LEU TYR PHE GLN GLY SEQRES 3 A 475 MET VAL ILE LEU THR LEU ASN CYS GLY SER SER SER VAL SEQRES 4 A 475 LYS TYR GLN VAL TYR ASP TRP ASP ASN HIS SER VAL LEU SEQRES 5 A 475 ALA SER GLY VAL VAL GLU ARG VAL THR GLN PRO GLY SER SEQRES 6 A 475 VAL ILE THR HIS GLU ALA LYS GLY LYS ASP LYS TYR VAL SEQRES 7 A 475 LEU GLU SER PRO CYS PRO SER HIS THR HIS ALA VAL GLU SEQRES 8 A 475 LEU ILE ILE LYS THR LEU THR ASP PRO SER VAL GLY VAL SEQRES 9 A 475 ILE THR ASP MET ASN VAL ILE LYS ALA VAL GLY HIS ARG SEQRES 10 A 475 VAL THR HIS GLY GLY ASP LYS PHE ILE LYS SER VAL ILE SEQRES 11 A 475 VAL THR PRO GLU ILE LEU ASN THR PHE ARG GLU VAL GLN SEQRES 12 A 475 ASP LEU GLY PRO LEU HIS ASN PRO ALA ASN ILE MET GLY SEQRES 13 A 475 ILE GLU ALA ALA GLN LYS VAL LEU PRO ASN VAL PRO HIS SEQRES 14 A 475 CYS ALA ILE ILE ASP THR ALA TRP HIS GLN THR MET PRO SEQRES 15 A 475 GLU THR SER PHE MET TYR ALA ILE PRO HIS GLU TRP TYR SEQRES 16 A 475 GLU LYS TYR SER ALA ARG ARG TYR GLY PHE HIS GLY THR SEQRES 17 A 475 SER PHE LEU TYR THR ALA LYS ARG ALA ALA VAL ILE LEU SEQRES 18 A 475 GLY LYS LYS PRO GLU ASP THR ASN ILE ILE ILE ALA HIS SEQRES 19 A 475 ILE GLY ASN GLY ALA SER MET CYS CYS VAL LYS GLN GLY SEQRES 20 A 475 LYS CYS PHE ASP THR SER MET GLY LEU THR PRO LEU GLU SEQRES 21 A 475 GLY LEU VAL MET GLY THR ARG SER GLY ASP CYS ASP PRO SEQRES 22 A 475 ALA LEU PRO PHE TYR ILE MET ARG LYS THR GLY MET THR SEQRES 23 A 475 PRO ALA GLU MET ASP THR ALA LEU ASN LYS LYS SER GLY SEQRES 24 A 475 LEU LEU GLY VAL THR GLY GLN TYR VAL ASP ARG ARG ASP SEQRES 25 A 475 VAL SER LYS ALA MET GLY GLU GLY ASP LYS ARG ALA ARG SEQRES 26 A 475 LEU ALA PHE ASN MET GLU VAL TYR ARG LEU GLN LYS TYR SEQRES 27 A 475 PHE GLY ALA TYR ILE ALA ALA LEU GLY GLN LYS PRO ASP SEQRES 28 A 475 ALA ILE VAL PHE THR ALA GLY VAL GLY GLU PHE GLY PHE SEQRES 29 A 475 ASP THR ARG LEU ALA VAL CYS GLU GLY LEU THR HIS LEU SEQRES 30 A 475 GLY ILE LYS ILE ASP PRO LYS LYS ASN ALA LEU ALA ARG SEQRES 31 A 475 THR ARG ASN ALA GLU THR CYS ILE SER ALA ASP ASP SER SEQRES 32 A 475 PRO VAL LYS ILE PHE VAL ILE PRO THR ASP GLU GLU LEU SEQRES 33 A 475 VAL MET THR GLU ASP ALA TYR ALA LEU MET LYS GLY THR SEQRES 34 A 475 TYR ASP VAL HIS THR LYS PHE THR TYR SER PHE GLN SER SEQRES 35 A 475 PRO ASN TYR VAL ASN LYS ALA ARG ALA GLU GLY LEU LYS SEQRES 36 A 475 LYS ASP LEU GLU LYS LYS PRO GLU LEU ALA SER ILE VAL SEQRES 37 A 475 VAL LYS ILE PRO GLY ALA ARG HET AMP A 501 35 HET SO4 A 502 5 HET EDO A 503 10 HET EDO A 504 10 HETNAM AMP ADENOSINE MONOPHOSPHATE HETNAM SO4 SULFATE ION HETNAM EDO 1,2-ETHANEDIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 2 AMP C10 H14 N5 O7 P FORMUL 3 SO4 O4 S 2- FORMUL 4 EDO 2(C2 H6 O2) FORMUL 6 HOH *368(H2 O) HELIX 1 AA1 SER A 59 ASP A 73 1 15 HELIX 2 AA2 ASP A 81 ASN A 83 5 3 HELIX 3 AA3 THR A 106 GLN A 117 1 12 HELIX 4 AA4 ASP A 118 GLY A 120 5 3 HELIX 5 AA5 HIS A 123 LEU A 138 1 16 HELIX 6 AA6 THR A 149 MET A 155 5 7 HELIX 7 AA7 PRO A 156 MET A 161 1 6 HELIX 8 AA8 PRO A 165 SER A 173 1 9 HELIX 9 AA9 HIS A 180 GLY A 196 1 17 HELIX 10 AB1 LYS A 198 THR A 202 5 5 HELIX 11 AB2 ALA A 248 GLY A 258 1 11 HELIX 12 AB3 THR A 260 LYS A 271 1 12 HELIX 13 AB4 SER A 272 GLY A 279 1 8 HELIX 14 AB5 ASP A 283 GLU A 293 1 11 HELIX 15 AB6 ASP A 295 GLY A 321 1 27 HELIX 16 AB7 ALA A 331 GLY A 337 1 7 HELIX 17 AB8 GLY A 337 GLY A 347 1 11 HELIX 18 AB9 LEU A 348 GLY A 352 5 5 HELIX 19 AC1 ASP A 356 ALA A 363 1 8 HELIX 20 AC2 ASP A 387 GLY A 402 1 16 HELIX 21 AC3 VAL A 406 PHE A 410 5 5 HELIX 22 AC4 TYR A 412 SER A 416 5 5 HELIX 23 AC5 ASN A 421 LYS A 435 1 15 HELIX 24 AC6 PRO A 436 VAL A 442 5 7 SHEET 1 AA1 8 TYR A 51 GLU A 54 0 SHEET 2 AA1 8 VAL A 40 ALA A 45 -1 N HIS A 43 O TYR A 51 SHEET 3 AA1 8 SER A 24 GLU A 32 -1 N SER A 28 O GLU A 44 SHEET 4 AA1 8 SER A 12 ASP A 19 -1 N ASP A 19 O SER A 24 SHEET 5 AA1 8 VAL A 2 GLY A 9 -1 N ILE A 3 O TYR A 18 SHEET 6 AA1 8 ILE A 85 VAL A 92 1 O LYS A 86 N VAL A 2 SHEET 7 AA1 8 HIS A 143 ILE A 147 1 O CYS A 144 N HIS A 90 SHEET 8 AA1 8 VAL A 103 ILE A 104 -1 N VAL A 103 O ALA A 145 SHEET 1 AA2 6 LYS A 222 THR A 226 0 SHEET 2 AA2 6 ALA A 213 LYS A 219 -1 N CYS A 217 O PHE A 224 SHEET 3 AA2 6 ILE A 204 ILE A 209 -1 N ILE A 204 O VAL A 218 SHEET 4 AA2 6 ALA A 326 THR A 330 1 O VAL A 328 N ALA A 207 SHEET 5 AA2 6 LYS A 380 VAL A 383 1 O PHE A 382 N PHE A 329 SHEET 6 AA2 6 THR A 370 CYS A 371 -1 N THR A 370 O VAL A 383 CRYST1 88.102 105.232 52.735 90.00 90.00 90.00 P 21 21 2 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011350 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009503 0.000000 0.00000 SCALE3 0.000000 0.000000 0.018963 0.00000