HEADER DNA BINDING PROTEIN/DNA 08-OCT-24 9DVT TITLE CRYO-EM STRUCTURE OF RPAA BOUND TO PKAIBC DNA AND THE CTD OF THE ALPHA TITLE 2 SUBUNIT OF RNAP FROM THE CYANOBACTERIUM SYNECHOCOCCUS ELONGATUS COMPND MOL_ID: 1; COMPND 2 MOLECULE: NON-TEMPLATE DNA; COMPND 3 CHAIN: 1; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: TEMPLATE DNA; COMPND 7 CHAIN: 2; COMPND 8 ENGINEERED: YES; COMPND 9 MOL_ID: 3; COMPND 10 MOLECULE: DNA-DIRECTED RNA POLYMERASE SUBUNIT ALPHA; COMPND 11 CHAIN: A; COMPND 12 SYNONYM: RNAP SUBUNIT ALPHA,RNA POLYMERASE SUBUNIT ALPHA, COMPND 13 TRANSCRIPTASE SUBUNIT ALPHA; COMPND 14 EC: 2.7.7.6; COMPND 15 ENGINEERED: YES; COMPND 16 MOL_ID: 4; COMPND 17 MOLECULE: DNA-BINDING DUAL MASTER TRANSCRIPTIONAL REGULATOR RPAA; COMPND 18 CHAIN: R, S; COMPND 19 SYNONYM: REGULATOR OF PHYCOBILISOME-ASSOCIATED PROTEIN A,RPAA; COMPND 20 ENGINEERED: YES; COMPND 21 MOL_ID: 5; COMPND 22 MOLECULE: RNA POLYMERASE SIGMA FACTOR SIGA1; COMPND 23 CHAIN: G; COMPND 24 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 SYNTHETIC: YES; SOURCE 3 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 4 ORGANISM_TAXID: 32630; SOURCE 5 MOL_ID: 2; SOURCE 6 SYNTHETIC: YES; SOURCE 7 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 8 ORGANISM_TAXID: 32630; SOURCE 9 MOL_ID: 3; SOURCE 10 ORGANISM_SCIENTIFIC: SYNECHOCOCCUS ELONGATUS; SOURCE 11 ORGANISM_TAXID: 32046; SOURCE 12 GENE: RPOA, SYNPCC7942_2209; SOURCE 13 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 14 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 15 MOL_ID: 4; SOURCE 16 ORGANISM_SCIENTIFIC: SYNECHOCOCCUS ELONGATUS PCC 7942 = FACHB-805; SOURCE 17 ORGANISM_TAXID: 1140; SOURCE 18 STRAIN: ATCC 33912 / PCC 7942 / FACHB-805; SOURCE 19 GENE: RPAA, SYNPCC7942_0095; SOURCE 20 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 21 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 22 MOL_ID: 5; SOURCE 23 ORGANISM_SCIENTIFIC: SYNECHOCOCCUS ELONGATUS PCC 7942 = FACHB-805; SOURCE 24 ORGANISM_TAXID: 1140; SOURCE 25 STRAIN: ATCC 33912 / PCC 7942 / FACHB-805; SOURCE 26 GENE: SIGA1, RPOD1, SYNPCC7942_0649; SOURCE 27 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 28 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS ALPHA SUBUNIT OF RNAP, PKAIBC DNA, RPAA, TRANSCRIPTION FACTOR, DNA KEYWDS 2 BINDING PROTEIN, DNA BINDING PROTEIN-DNA COMPLEX EXPDTA ELECTRON MICROSCOPY AUTHOR M.FANG,Y.GU,M.MATYSZEWSKI,M.LEANCA,A.LIWANG,Y.YUZENKOVA,K.D.CORBETT, AUTHOR 2 S.E.GOLDEN REVDAT 1 15-OCT-25 9DVT 0 JRNL AUTH M.FANG,Y.GU,M.LEANCA,M.MATYSZEWSKI,A.LIWANG,Y.YUZENKOVA, JRNL AUTH 2 K.D.CORBETT,S.E.GOLDEN JRNL TITL RECONSTITUTION OF CIRCADIAN TRANSCRIPTION IN VITRO THROUGH JRNL TITL 2 RPAA REGULATION JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 3.74 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 SOFTWARE PACKAGES : PHENIX REMARK 3 RECONSTRUCTION SCHEMA : NULL REMARK 3 REMARK 3 EM MAP-MODEL FITTING AND REFINEMENT REMARK 3 PDB ENTRY : NULL REMARK 3 REFINEMENT SPACE : NULL REMARK 3 REFINEMENT PROTOCOL : NULL REMARK 3 REFINEMENT TARGET : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE : NULL REMARK 3 REMARK 3 FITTING PROCEDURE : NULL REMARK 3 REMARK 3 EM IMAGE RECONSTRUCTION STATISTICS REMARK 3 NOMINAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 ACTUAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 EFFECTIVE RESOLUTION (ANGSTROMS) : 3.740 REMARK 3 NUMBER OF PARTICLES : 81192 REMARK 3 CTF CORRECTION METHOD : NONE REMARK 3 REMARK 3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: NULL REMARK 3 REMARK 3 OTHER DETAILS: NULL REMARK 4 REMARK 4 9DVT COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 09-OCT-24. REMARK 100 THE DEPOSITION ID IS D_1000288936. REMARK 245 REMARK 245 EXPERIMENTAL DETAILS REMARK 245 RECONSTRUCTION METHOD : SINGLE PARTICLE REMARK 245 SPECIMEN TYPE : NULL REMARK 245 REMARK 245 ELECTRON MICROSCOPE SAMPLE REMARK 245 SAMPLE TYPE : PARTICLE REMARK 245 PARTICLE TYPE : POINT REMARK 245 NAME OF SAMPLE : CRYOEM STRUCTURE OF SYN7942 REMARK 245 RNAP-SIGA HOLOENZYME REMARK 245 SAMPLE CONCENTRATION (MG ML-1) : NULL REMARK 245 SAMPLE SUPPORT DETAILS : NULL REMARK 245 SAMPLE VITRIFICATION DETAILS : NULL REMARK 245 SAMPLE BUFFER : NULL REMARK 245 PH : 8.00 REMARK 245 SAMPLE DETAILS : NULL REMARK 245 REMARK 245 DATA ACQUISITION REMARK 245 DATE OF EXPERIMENT : NULL REMARK 245 NUMBER OF MICROGRAPHS-IMAGES : NULL REMARK 245 TEMPERATURE (KELVIN) : NULL REMARK 245 MICROSCOPE MODEL : TFS KRIOS REMARK 245 DETECTOR TYPE : FEI FALCON IV (4K X 4K) REMARK 245 MINIMUM DEFOCUS (NM) : 800.00 REMARK 245 MAXIMUM DEFOCUS (NM) : 2000.00 REMARK 245 MINIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 MAXIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 NOMINAL CS : NULL REMARK 245 IMAGING MODE : BRIGHT FIELD REMARK 245 ELECTRON DOSE (ELECTRONS NM**-2) : 5000.00 REMARK 245 ILLUMINATION MODE : FLOOD BEAM REMARK 245 NOMINAL MAGNIFICATION : NULL REMARK 245 CALIBRATED MAGNIFICATION : NULL REMARK 245 SOURCE : FIELD EMISSION GUN REMARK 245 ACCELERATION VOLTAGE (KV) : 300 REMARK 245 IMAGING DETAILS : NULL REMARK 247 REMARK 247 ELECTRON MICROSCOPY REMARK 247 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON REMARK 247 MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE REMARK 247 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES REMARK 247 ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION REMARK 247 OF THE STRUCTURE FACTORS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEXAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: 1, 2, A, R, S, G REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 DC 1 1 REMARK 465 DT 1 2 REMARK 465 DG 1 3 REMARK 465 DA 1 4 REMARK 465 DA 1 5 REMARK 465 DA 1 6 REMARK 465 DA 1 7 REMARK 465 DC 1 8 REMARK 465 DC 1 9 REMARK 465 DT 1 46 REMARK 465 DC 1 47 REMARK 465 DT 1 48 REMARK 465 DC 1 49 REMARK 465 DT 1 50 REMARK 465 DC 1 51 REMARK 465 DT 1 52 REMARK 465 DT 1 53 REMARK 465 DT 1 54 REMARK 465 DA 1 55 REMARK 465 DT 1 56 REMARK 465 DC 1 57 REMARK 465 DC 1 58 REMARK 465 DT 1 59 REMARK 465 DG 1 60 REMARK 465 DT 1 61 REMARK 465 DT 1 62 REMARK 465 DA 1 63 REMARK 465 DG 1 64 REMARK 465 DA 1 65 REMARK 465 DT 1 66 REMARK 465 DG 1 67 REMARK 465 DG 1 68 REMARK 465 DT 1 69 REMARK 465 DT 1 70 REMARK 465 DT 1 71 REMARK 465 DG 1 72 REMARK 465 DA 1 73 REMARK 465 DT 1 74 REMARK 465 DT 1 75 REMARK 465 DG 1 76 REMARK 465 DC 1 77 REMARK 465 DT 1 78 REMARK 465 DG 1 79 REMARK 465 DT 1 80 REMARK 465 DT 1 81 REMARK 465 DG 1 82 REMARK 465 DC 1 83 REMARK 465 DT 1 84 REMARK 465 DA 1 85 REMARK 465 DC 1 86 REMARK 465 DC 1 87 REMARK 465 DC 1 88 REMARK 465 DC 1 89 REMARK 465 DG 1 90 REMARK 465 DT 1 91 REMARK 465 DT 1 92 REMARK 465 DG 1 93 REMARK 465 DA 1 94 REMARK 465 DT 1 95 REMARK 465 DC 1 96 REMARK 465 DT 1 97 REMARK 465 DG 1 98 REMARK 465 DC 1 99 REMARK 465 DG 1 100 REMARK 465 DT 1 101 REMARK 465 DA 1 102 REMARK 465 DT 1 103 REMARK 465 DG 1 104 REMARK 465 DA 1 105 REMARK 465 DT 2 1 REMARK 465 DC 2 2 REMARK 465 DA 2 3 REMARK 465 DT 2 4 REMARK 465 DA 2 5 REMARK 465 DC 2 6 REMARK 465 DG 2 7 REMARK 465 DC 2 8 REMARK 465 DA 2 9 REMARK 465 DG 2 10 REMARK 465 DA 2 11 REMARK 465 DT 2 12 REMARK 465 DC 2 13 REMARK 465 DA 2 14 REMARK 465 DA 2 15 REMARK 465 DC 2 16 REMARK 465 DG 2 17 REMARK 465 DG 2 18 REMARK 465 DG 2 19 REMARK 465 DG 2 20 REMARK 465 DT 2 21 REMARK 465 DA 2 22 REMARK 465 DG 2 23 REMARK 465 DC 2 24 REMARK 465 DA 2 25 REMARK 465 DA 2 26 REMARK 465 DC 2 27 REMARK 465 DA 2 28 REMARK 465 DG 2 29 REMARK 465 DC 2 30 REMARK 465 DA 2 31 REMARK 465 DA 2 32 REMARK 465 DT 2 33 REMARK 465 DC 2 34 REMARK 465 DA 2 35 REMARK 465 DA 2 36 REMARK 465 DA 2 37 REMARK 465 DC 2 38 REMARK 465 DC 2 39 REMARK 465 DA 2 40 REMARK 465 DT 2 41 REMARK 465 DC 2 42 REMARK 465 DT 2 43 REMARK 465 DA 2 44 REMARK 465 DA 2 45 REMARK 465 DC 2 46 REMARK 465 DA 2 47 REMARK 465 DG 2 48 REMARK 465 DG 2 49 REMARK 465 DA 2 50 REMARK 465 DT 2 51 REMARK 465 DA 2 52 REMARK 465 DA 2 53 REMARK 465 DA 2 54 REMARK 465 DG 2 55 REMARK 465 DA 2 56 REMARK 465 DG 2 57 REMARK 465 DA 2 58 REMARK 465 DG 2 59 REMARK 465 DA 2 60 REMARK 465 DG 2 97 REMARK 465 DG 2 98 REMARK 465 DT 2 99 REMARK 465 DT 2 100 REMARK 465 DT 2 101 REMARK 465 DT 2 102 REMARK 465 DC 2 103 REMARK 465 DA 2 104 REMARK 465 DG 2 105 REMARK 465 MET A 1 REMARK 465 THR A 2 REMARK 465 PHE A 3 REMARK 465 GLN A 4 REMARK 465 VAL A 5 REMARK 465 GLU A 6 REMARK 465 CYS A 7 REMARK 465 VAL A 8 REMARK 465 GLU A 9 REMARK 465 SER A 10 REMARK 465 ARG A 11 REMARK 465 THR A 12 REMARK 465 GLU A 13 REMARK 465 ALA A 14 REMARK 465 ASP A 15 REMARK 465 GLN A 16 REMARK 465 GLY A 17 REMARK 465 GLN A 18 REMARK 465 TYR A 19 REMARK 465 GLY A 20 REMARK 465 ARG A 21 REMARK 465 PHE A 22 REMARK 465 SER A 23 REMARK 465 ILE A 24 REMARK 465 GLU A 25 REMARK 465 PRO A 26 REMARK 465 LEU A 27 REMARK 465 ALA A 28 REMARK 465 ARG A 29 REMARK 465 GLY A 30 REMARK 465 GLN A 31 REMARK 465 GLY A 32 REMARK 465 THR A 33 REMARK 465 THR A 34 REMARK 465 VAL A 35 REMARK 465 GLY A 36 REMARK 465 ASN A 37 REMARK 465 ALA A 38 REMARK 465 LEU A 39 REMARK 465 ARG A 40 REMARK 465 ARG A 41 REMARK 465 VAL A 42 REMARK 465 LEU A 43 REMARK 465 LEU A 44 REMARK 465 SER A 45 REMARK 465 ASN A 46 REMARK 465 LEU A 47 REMARK 465 GLU A 48 REMARK 465 GLY A 49 REMARK 465 THR A 50 REMARK 465 ALA A 51 REMARK 465 VAL A 52 REMARK 465 THR A 53 REMARK 465 ALA A 54 REMARK 465 VAL A 55 REMARK 465 ARG A 56 REMARK 465 ILE A 57 REMARK 465 GLY A 58 REMARK 465 GLY A 59 REMARK 465 VAL A 60 REMARK 465 ASN A 61 REMARK 465 HIS A 62 REMARK 465 GLU A 63 REMARK 465 PHE A 64 REMARK 465 ALA A 65 REMARK 465 THR A 66 REMARK 465 ILE A 67 REMARK 465 PRO A 68 REMARK 465 GLY A 69 REMARK 465 VAL A 70 REMARK 465 ARG A 71 REMARK 465 GLU A 72 REMARK 465 ASP A 73 REMARK 465 VAL A 74 REMARK 465 LEU A 75 REMARK 465 ASP A 76 REMARK 465 ILE A 77 REMARK 465 LEU A 78 REMARK 465 LEU A 79 REMARK 465 ASN A 80 REMARK 465 VAL A 81 REMARK 465 ARG A 82 REMARK 465 GLU A 83 REMARK 465 LEU A 84 REMARK 465 VAL A 85 REMARK 465 VAL A 86 REMARK 465 HIS A 87 REMARK 465 ALA A 88 REMARK 465 HIS A 89 REMARK 465 SER A 90 REMARK 465 PRO A 91 REMARK 465 GLN A 92 REMARK 465 PRO A 93 REMARK 465 GLN A 94 REMARK 465 ILE A 95 REMARK 465 GLY A 96 REMARK 465 ARG A 97 REMARK 465 LEU A 98 REMARK 465 ARG A 99 REMARK 465 VAL A 100 REMARK 465 VAL A 101 REMARK 465 GLY A 102 REMARK 465 PRO A 103 REMARK 465 ALA A 104 REMARK 465 THR A 105 REMARK 465 VAL A 106 REMARK 465 THR A 107 REMARK 465 ALA A 108 REMARK 465 ALA A 109 REMARK 465 ASP A 110 REMARK 465 VAL A 111 REMARK 465 ASP A 112 REMARK 465 PHE A 113 REMARK 465 GLY A 114 REMARK 465 PRO A 115 REMARK 465 GLU A 116 REMARK 465 VAL A 117 REMARK 465 GLU A 118 REMARK 465 VAL A 119 REMARK 465 ILE A 120 REMARK 465 ASN A 121 REMARK 465 PRO A 122 REMARK 465 ASN A 123 REMARK 465 HIS A 124 REMARK 465 TYR A 125 REMARK 465 ILE A 126 REMARK 465 ALA A 127 REMARK 465 SER A 128 REMARK 465 LEU A 129 REMARK 465 SER A 130 REMARK 465 GLU A 131 REMARK 465 GLY A 132 REMARK 465 ALA A 133 REMARK 465 THR A 134 REMARK 465 LEU A 135 REMARK 465 GLU A 136 REMARK 465 MET A 137 REMARK 465 GLU A 138 REMARK 465 LEU A 139 REMARK 465 LYS A 140 REMARK 465 VAL A 141 REMARK 465 GLU A 142 REMARK 465 TRP A 143 REMARK 465 GLY A 144 REMARK 465 THR A 145 REMARK 465 GLY A 146 REMARK 465 TYR A 147 REMARK 465 ARG A 148 REMARK 465 ALA A 149 REMARK 465 ILE A 150 REMARK 465 ASP A 151 REMARK 465 ARG A 152 REMARK 465 SER A 153 REMARK 465 HIS A 154 REMARK 465 ASP A 155 REMARK 465 GLU A 156 REMARK 465 THR A 157 REMARK 465 THR A 158 REMARK 465 ALA A 159 REMARK 465 LEU A 160 REMARK 465 ASP A 161 REMARK 465 PHE A 162 REMARK 465 LEU A 163 REMARK 465 GLN A 164 REMARK 465 LEU A 165 REMARK 465 ASP A 166 REMARK 465 ALA A 167 REMARK 465 VAL A 168 REMARK 465 PHE A 169 REMARK 465 MET A 170 REMARK 465 PRO A 171 REMARK 465 VAL A 172 REMARK 465 ARG A 173 REMARK 465 ARG A 174 REMARK 465 VAL A 175 REMARK 465 ASN A 176 REMARK 465 TYR A 177 REMARK 465 SER A 178 REMARK 465 VAL A 179 REMARK 465 GLU A 180 REMARK 465 ASP A 181 REMARK 465 ALA A 182 REMARK 465 ARG A 183 REMARK 465 VAL A 184 REMARK 465 GLY A 185 REMARK 465 GLU A 186 REMARK 465 SER A 187 REMARK 465 THR A 188 REMARK 465 ALA A 189 REMARK 465 ILE A 190 REMARK 465 ASP A 191 REMARK 465 ARG A 192 REMARK 465 LEU A 193 REMARK 465 VAL A 194 REMARK 465 LEU A 195 REMARK 465 GLU A 196 REMARK 465 VAL A 197 REMARK 465 TRP A 198 REMARK 465 THR A 199 REMARK 465 ASN A 200 REMARK 465 GLY A 201 REMARK 465 SER A 202 REMARK 465 LEU A 203 REMARK 465 SER A 204 REMARK 465 PRO A 205 REMARK 465 GLN A 206 REMARK 465 GLU A 207 REMARK 465 ALA A 208 REMARK 465 LEU A 209 REMARK 465 SER A 210 REMARK 465 GLN A 211 REMARK 465 ALA A 212 REMARK 465 ALA A 213 REMARK 465 SER A 214 REMARK 465 CYS A 215 REMARK 465 LEU A 216 REMARK 465 VAL A 217 REMARK 465 ALA A 218 REMARK 465 LEU A 219 REMARK 465 PHE A 220 REMARK 465 GLU A 221 REMARK 465 PRO A 222 REMARK 465 LEU A 223 REMARK 465 LYS A 224 REMARK 465 ASN A 225 REMARK 465 VAL A 226 REMARK 465 SER A 227 REMARK 465 VAL A 228 REMARK 465 GLY A 229 REMARK 465 SER A 230 REMARK 465 THR A 231 REMARK 465 HIS A 232 REMARK 465 THR A 233 REMARK 465 ALA A 234 REMARK 465 ASP A 235 REMARK 465 PRO A 236 REMARK 465 GLU A 237 REMARK 465 PRO A 238 REMARK 465 ILE A 301 REMARK 465 LYS A 302 REMARK 465 LEU A 303 REMARK 465 GLN A 304 REMARK 465 GLU A 305 REMARK 465 SER A 306 REMARK 465 LYS A 307 REMARK 465 VAL A 308 REMARK 465 SER A 309 REMARK 465 ARG R 125 REMARK 465 ILE R 126 REMARK 465 PRO R 127 REMARK 465 HIS R 128 REMARK 465 ALA R 129 REMARK 465 ALA R 130 REMARK 465 ARG R 131 REMARK 465 HIS R 132 REMARK 465 PHE R 245 REMARK 465 PRO R 246 REMARK 465 SER R 247 REMARK 465 ALA R 248 REMARK 465 SER R 249 REMARK 465 ARG S 125 REMARK 465 ILE S 126 REMARK 465 PRO S 127 REMARK 465 HIS S 128 REMARK 465 ALA S 129 REMARK 465 ALA S 130 REMARK 465 ARG S 131 REMARK 465 HIS S 132 REMARK 465 SER S 133 REMARK 465 ALA S 242 REMARK 465 ASP S 243 REMARK 465 GLN S 244 REMARK 465 PHE S 245 REMARK 465 PRO S 246 REMARK 465 SER S 247 REMARK 465 ALA S 248 REMARK 465 SER S 249 REMARK 465 MET G 1 REMARK 465 THR G 2 REMARK 465 GLN G 3 REMARK 465 LEU G 4 REMARK 465 ILE G 5 REMARK 465 SER G 6 REMARK 465 ILE G 7 REMARK 465 ASP G 8 REMARK 465 LYS G 9 REMARK 465 GLU G 10 REMARK 465 GLN G 11 REMARK 465 GLU G 12 REMARK 465 GLU G 13 REMARK 465 ALA G 14 REMARK 465 GLY G 15 REMARK 465 MET G 16 REMARK 465 THR G 17 REMARK 465 GLN G 18 REMARK 465 ALA G 19 REMARK 465 THR G 20 REMARK 465 GLU G 21 REMARK 465 LEU G 22 REMARK 465 LEU G 23 REMARK 465 ASP G 24 REMARK 465 PRO G 25 REMARK 465 ALA G 26 REMARK 465 LEU G 27 REMARK 465 LYS G 28 REMARK 465 PRO G 29 REMARK 465 ALA G 30 REMARK 465 GLU G 31 REMARK 465 THR G 32 REMARK 465 LYS G 33 REMARK 465 ALA G 34 REMARK 465 LYS G 35 REMARK 465 ARG G 36 REMARK 465 SER G 37 REMARK 465 SER G 38 REMARK 465 ARG G 39 REMARK 465 LYS G 40 REMARK 465 LYS G 41 REMARK 465 ALA G 42 REMARK 465 THR G 43 REMARK 465 THR G 44 REMARK 465 ALA G 45 REMARK 465 VAL G 46 REMARK 465 VAL G 47 REMARK 465 GLU G 48 REMARK 465 PRO G 49 REMARK 465 ALA G 50 REMARK 465 THR G 51 REMARK 465 THR G 52 REMARK 465 ILE G 53 REMARK 465 ALA G 54 REMARK 465 PRO G 55 REMARK 465 THR G 56 REMARK 465 ALA G 57 REMARK 465 ASP G 58 REMARK 465 VAL G 59 REMARK 465 ASP G 60 REMARK 465 ALA G 61 REMARK 465 ILE G 62 REMARK 465 ASP G 63 REMARK 465 ASP G 64 REMARK 465 GLU G 65 REMARK 465 ASP G 66 REMARK 465 SER G 67 REMARK 465 VAL G 68 REMARK 465 GLY G 69 REMARK 465 GLU G 70 REMARK 465 ASP G 71 REMARK 465 GLU G 72 REMARK 465 ASP G 73 REMARK 465 ALA G 74 REMARK 465 ALA G 75 REMARK 465 ALA G 76 REMARK 465 LYS G 77 REMARK 465 ALA G 78 REMARK 465 LYS G 79 REMARK 465 ALA G 80 REMARK 465 LYS G 81 REMARK 465 VAL G 82 REMARK 465 ARG G 83 REMARK 465 LYS G 84 REMARK 465 THR G 85 REMARK 465 TYR G 86 REMARK 465 THR G 87 REMARK 465 GLU G 88 REMARK 465 ASP G 89 REMARK 465 SER G 90 REMARK 465 ILE G 91 REMARK 465 ARG G 92 REMARK 465 LEU G 93 REMARK 465 TYR G 94 REMARK 465 LEU G 95 REMARK 465 GLN G 96 REMARK 465 GLU G 97 REMARK 465 ILE G 98 REMARK 465 GLY G 99 REMARK 465 ARG G 100 REMARK 465 ILE G 101 REMARK 465 ARG G 102 REMARK 465 LEU G 103 REMARK 465 LEU G 104 REMARK 465 ARG G 105 REMARK 465 ALA G 106 REMARK 465 ASP G 107 REMARK 465 GLU G 108 REMARK 465 GLU G 109 REMARK 465 ILE G 110 REMARK 465 GLU G 111 REMARK 465 LEU G 112 REMARK 465 ALA G 113 REMARK 465 ARG G 114 REMARK 465 GLN G 115 REMARK 465 ILE G 116 REMARK 465 ALA G 117 REMARK 465 ASP G 118 REMARK 465 LEU G 119 REMARK 465 LEU G 120 REMARK 465 ALA G 121 REMARK 465 LEU G 122 REMARK 465 GLU G 123 REMARK 465 ARG G 124 REMARK 465 ILE G 125 REMARK 465 ARG G 126 REMARK 465 ASP G 127 REMARK 465 GLU G 128 REMARK 465 LEU G 129 REMARK 465 LEU G 130 REMARK 465 GLU G 131 REMARK 465 GLN G 132 REMARK 465 LEU G 133 REMARK 465 ASP G 134 REMARK 465 ARG G 135 REMARK 465 LEU G 136 REMARK 465 PRO G 137 REMARK 465 SER G 138 REMARK 465 ASP G 139 REMARK 465 ALA G 140 REMARK 465 GLU G 141 REMARK 465 TRP G 142 REMARK 465 ALA G 143 REMARK 465 ALA G 144 REMARK 465 ALA G 145 REMARK 465 VAL G 146 REMARK 465 ASP G 147 REMARK 465 SER G 148 REMARK 465 PRO G 149 REMARK 465 LEU G 150 REMARK 465 ASP G 151 REMARK 465 GLU G 152 REMARK 465 PHE G 153 REMARK 465 ARG G 154 REMARK 465 ARG G 155 REMARK 465 ARG G 156 REMARK 465 LEU G 157 REMARK 465 PHE G 158 REMARK 465 ARG G 159 REMARK 465 GLY G 160 REMARK 465 ARG G 161 REMARK 465 ARG G 162 REMARK 465 ALA G 163 REMARK 465 LYS G 164 REMARK 465 ASP G 165 REMARK 465 LYS G 166 REMARK 465 MET G 167 REMARK 465 VAL G 168 REMARK 465 GLN G 169 REMARK 465 SER G 170 REMARK 465 ASN G 171 REMARK 465 LEU G 172 REMARK 465 ARG G 173 REMARK 465 LEU G 174 REMARK 465 VAL G 175 REMARK 465 VAL G 176 REMARK 465 SER G 177 REMARK 465 ILE G 178 REMARK 465 ALA G 179 REMARK 465 LYS G 180 REMARK 465 LYS G 181 REMARK 465 TYR G 182 REMARK 465 MET G 183 REMARK 465 ASN G 184 REMARK 465 ARG G 185 REMARK 465 GLY G 186 REMARK 465 LEU G 187 REMARK 465 SER G 188 REMARK 465 PHE G 189 REMARK 465 GLN G 190 REMARK 465 ASP G 191 REMARK 465 LEU G 192 REMARK 465 ILE G 193 REMARK 465 GLN G 194 REMARK 465 GLU G 195 REMARK 465 GLY G 196 REMARK 465 SER G 197 REMARK 465 LEU G 198 REMARK 465 GLY G 199 REMARK 465 LEU G 200 REMARK 465 ILE G 201 REMARK 465 ARG G 202 REMARK 465 ALA G 203 REMARK 465 ALA G 204 REMARK 465 GLU G 205 REMARK 465 LYS G 206 REMARK 465 PHE G 207 REMARK 465 ASP G 208 REMARK 465 HIS G 209 REMARK 465 GLU G 210 REMARK 465 LYS G 211 REMARK 465 GLY G 212 REMARK 465 TYR G 213 REMARK 465 LYS G 214 REMARK 465 PHE G 215 REMARK 465 SER G 216 REMARK 465 THR G 217 REMARK 465 TYR G 218 REMARK 465 ALA G 219 REMARK 465 THR G 220 REMARK 465 TRP G 221 REMARK 465 TRP G 222 REMARK 465 ILE G 223 REMARK 465 ARG G 224 REMARK 465 GLN G 225 REMARK 465 ALA G 226 REMARK 465 ILE G 227 REMARK 465 THR G 228 REMARK 465 ARG G 229 REMARK 465 ALA G 230 REMARK 465 ILE G 231 REMARK 465 ALA G 232 REMARK 465 ASP G 233 REMARK 465 GLN G 234 REMARK 465 SER G 235 REMARK 465 ARG G 236 REMARK 465 THR G 237 REMARK 465 ILE G 238 REMARK 465 ARG G 239 REMARK 465 LEU G 240 REMARK 465 PRO G 241 REMARK 465 VAL G 242 REMARK 465 HIS G 243 REMARK 465 LEU G 244 REMARK 465 TYR G 245 REMARK 465 GLU G 246 REMARK 465 THR G 247 REMARK 465 ILE G 248 REMARK 465 SER G 249 REMARK 465 ARG G 250 REMARK 465 ILE G 251 REMARK 465 LYS G 252 REMARK 465 LYS G 253 REMARK 465 THR G 254 REMARK 465 THR G 255 REMARK 465 LYS G 256 REMARK 465 LEU G 257 REMARK 465 LEU G 258 REMARK 465 SER G 259 REMARK 465 GLN G 260 REMARK 465 GLU G 261 REMARK 465 MET G 262 REMARK 465 GLY G 263 REMARK 465 ARG G 264 REMARK 465 LYS G 265 REMARK 465 PRO G 266 REMARK 465 THR G 267 REMARK 465 GLU G 268 REMARK 465 GLU G 269 REMARK 465 GLU G 270 REMARK 465 ILE G 271 REMARK 465 ALA G 272 REMARK 465 THR G 273 REMARK 465 ARG G 274 REMARK 465 MET G 275 REMARK 465 GLU G 276 REMARK 465 MET G 277 REMARK 465 THR G 278 REMARK 465 ILE G 279 REMARK 465 GLU G 280 REMARK 465 LYS G 281 REMARK 465 LEU G 282 REMARK 465 ARG G 283 REMARK 465 PHE G 284 REMARK 465 ILE G 285 REMARK 465 ALA G 286 REMARK 465 LYS G 287 REMARK 465 SER G 288 REMARK 465 ALA G 289 REMARK 465 GLN G 290 REMARK 465 LEU G 291 REMARK 465 PRO G 292 REMARK 465 ILE G 293 REMARK 465 SER G 294 REMARK 465 LEU G 295 REMARK 465 GLU G 296 REMARK 465 THR G 297 REMARK 465 PRO G 298 REMARK 465 ILE G 299 REMARK 465 GLY G 300 REMARK 465 LYS G 301 REMARK 465 GLU G 302 REMARK 465 GLU G 303 REMARK 465 ASP G 304 REMARK 465 SER G 305 REMARK 465 ARG G 306 REMARK 465 LEU G 307 REMARK 465 GLY G 308 REMARK 465 ASP G 309 REMARK 465 PHE G 310 REMARK 465 ILE G 311 REMARK 465 GLU G 312 REMARK 465 ALA G 313 REMARK 465 ASP G 314 REMARK 465 GLY G 315 REMARK 465 GLU G 316 REMARK 465 THR G 317 REMARK 465 PRO G 318 REMARK 465 GLU G 319 REMARK 465 ASP G 320 REMARK 465 GLU G 321 REMARK 465 ARG G 399 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 HIS G 387 CG ND1 CD2 CE1 NE2 REMARK 470 ASN G 389 CG OD1 ND2 REMARK 470 ARG G 390 CG CD NE CZ NH1 NH2 REMARK 470 ASN G 391 CG OD1 ND2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OP1 DG 1 17 OG1 THR R 222 2.04 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 DC 1 41 O4' - C1' - N1 ANGL. DEV. = 1.9 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 MET R 55 56.04 -99.98 REMARK 500 ARG R 58 -33.05 69.13 REMARK 500 LEU R 85 91.17 34.77 REMARK 500 PHE R 95 -9.22 -57.95 REMARK 500 PHE R 153 -109.59 51.74 REMARK 500 MET S 55 55.38 -99.88 REMARK 500 ARG S 58 -33.11 69.28 REMARK 500 LEU S 85 90.41 35.47 REMARK 500 PHE S 153 -109.92 51.45 REMARK 500 GLU G 372 -5.18 73.61 REMARK 500 ARG G 390 -7.63 72.33 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 LEU R 141 THR R 142 139.69 REMARK 500 THR G 359 LEU G 360 147.38 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 ARG R 122 0.13 SIDE CHAIN REMARK 500 ARG R 218 0.08 SIDE CHAIN REMARK 500 ARG S 122 0.13 SIDE CHAIN REMARK 500 ARG S 218 0.08 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EMD-47222 RELATED DB: EMDB REMARK 900 CRYO-EM STRUCTURE OF RPAA BOUND TO PKAIBC DNA AND THE CTD OF THE REMARK 900 ALPHA SUBUNIT OF RNAP FROM THE CYANOBACTERIUM SYNECHOCOCCUS REMARK 900 ELONGATUS DBREF 9DVT 1 1 105 PDB 9DVT 9DVT 1 105 DBREF 9DVT 2 1 105 PDB 9DVT 9DVT 1 105 DBREF 9DVT A 1 309 UNP Q31L30 RPOA_SYNE7 1 309 DBREF 9DVT R 1 249 UNP Q31S42 RPAA_SYNE7 1 249 DBREF 9DVT S 1 249 UNP Q31S42 RPAA_SYNE7 1 249 DBREF 9DVT G 1 399 UNP P38023 SIGA1_SYNE7 1 399 SEQADV 9DVT GLN R 121 UNP Q31S42 ARG 121 CONFLICT SEQADV 9DVT GLN S 121 UNP Q31S42 ARG 121 CONFLICT SEQRES 1 1 105 DC DT DG DA DA DA DA DC DC DT DG DA DA SEQRES 2 1 105 DA DA DG DG DT DA DA DA DG DG DA DG DG SEQRES 3 1 105 DT DC DT DT DA DA DG DC DT DC DG DG DC SEQRES 4 1 105 DT DC DA DA DT DT DT DC DT DC DT DC DT SEQRES 5 1 105 DT DT DA DT DC DC DT DG DT DT DA DG DA SEQRES 6 1 105 DT DG DG DT DT DT DG DA DT DT DG DC DT SEQRES 7 1 105 DG DT DT DG DC DT DA DC DC DC DC DG DT SEQRES 8 1 105 DT DG DA DT DC DT DG DC DG DT DA DT DG SEQRES 9 1 105 DA SEQRES 1 2 105 DT DC DA DT DA DC DG DC DA DG DA DT DC SEQRES 2 2 105 DA DA DC DG DG DG DG DT DA DG DC DA DA SEQRES 3 2 105 DC DA DG DC DA DA DT DC DA DA DA DC DC SEQRES 4 2 105 DA DT DC DT DA DA DC DA DG DG DA DT DA SEQRES 5 2 105 DA DA DG DA DG DA DG DA DA DA DT DT DG SEQRES 6 2 105 DA DG DC DC DG DA DG DC DT DT DA DA DG SEQRES 7 2 105 DA DC DC DT DC DC DT DT DT DA DC DC DT SEQRES 8 2 105 DT DT DT DC DA DG DG DT DT DT DT DC DA SEQRES 9 2 105 DG SEQRES 1 A 309 MET THR PHE GLN VAL GLU CYS VAL GLU SER ARG THR GLU SEQRES 2 A 309 ALA ASP GLN GLY GLN TYR GLY ARG PHE SER ILE GLU PRO SEQRES 3 A 309 LEU ALA ARG GLY GLN GLY THR THR VAL GLY ASN ALA LEU SEQRES 4 A 309 ARG ARG VAL LEU LEU SER ASN LEU GLU GLY THR ALA VAL SEQRES 5 A 309 THR ALA VAL ARG ILE GLY GLY VAL ASN HIS GLU PHE ALA SEQRES 6 A 309 THR ILE PRO GLY VAL ARG GLU ASP VAL LEU ASP ILE LEU SEQRES 7 A 309 LEU ASN VAL ARG GLU LEU VAL VAL HIS ALA HIS SER PRO SEQRES 8 A 309 GLN PRO GLN ILE GLY ARG LEU ARG VAL VAL GLY PRO ALA SEQRES 9 A 309 THR VAL THR ALA ALA ASP VAL ASP PHE GLY PRO GLU VAL SEQRES 10 A 309 GLU VAL ILE ASN PRO ASN HIS TYR ILE ALA SER LEU SER SEQRES 11 A 309 GLU GLY ALA THR LEU GLU MET GLU LEU LYS VAL GLU TRP SEQRES 12 A 309 GLY THR GLY TYR ARG ALA ILE ASP ARG SER HIS ASP GLU SEQRES 13 A 309 THR THR ALA LEU ASP PHE LEU GLN LEU ASP ALA VAL PHE SEQRES 14 A 309 MET PRO VAL ARG ARG VAL ASN TYR SER VAL GLU ASP ALA SEQRES 15 A 309 ARG VAL GLY GLU SER THR ALA ILE ASP ARG LEU VAL LEU SEQRES 16 A 309 GLU VAL TRP THR ASN GLY SER LEU SER PRO GLN GLU ALA SEQRES 17 A 309 LEU SER GLN ALA ALA SER CYS LEU VAL ALA LEU PHE GLU SEQRES 18 A 309 PRO LEU LYS ASN VAL SER VAL GLY SER THR HIS THR ALA SEQRES 19 A 309 ASP PRO GLU PRO THR PRO GLU SER GLN THR PRO ILE GLU SEQRES 20 A 309 ASP LEU GLN LEU SER VAL ARG ALA TYR ASN CYS LEU LYS SEQRES 21 A 309 ARG ALA GLN VAL ASN SER VAL ALA ASP LEU LEU SER TYR SEQRES 22 A 309 THR TYR GLU ASP LEU LEU GLU ILE LYS ASN PHE GLY GLN SEQRES 23 A 309 LYS SER ALA GLU GLU VAL VAL GLU ALA LEU GLU ARG ILE SEQRES 24 A 309 GLY ILE LYS LEU GLN GLU SER LYS VAL SER SEQRES 1 R 249 MET LYS PRO ARG ILE LEU VAL ILE ASP ASP ASP SER ALA SEQRES 2 R 249 ILE LEU GLU LEU VAL ALA VAL ASN LEU GLU MET SER GLY SEQRES 3 R 249 TYR ASP VAL ARG LYS ALA GLU ASP GLY ILE LYS GLY GLN SEQRES 4 R 249 ALA LEU ALA VAL GLN LEU VAL PRO ASP LEU ILE MET LEU SEQRES 5 R 249 PHD LEU MET LEU PRO ARG VAL ASP GLY PHE THR VAL CYS SEQRES 6 R 249 GLN ARG LEU ARG ARG ASP GLU ARG THR ALA GLU ILE PRO SEQRES 7 R 249 VAL LEU MET LEU THR ALA LEU GLY GLN THR GLN ASP LYS SEQRES 8 R 249 VAL GLU GLY PHE ASN ALA GLY ALA ASP ASP TYR LEU THR SEQRES 9 R 249 LYS PRO PHE GLU VAL GLU GLU MET LEU ALA ARG VAL ARG SEQRES 10 R 249 ALA LEU LEU GLN ARG THR ASP ARG ILE PRO HIS ALA ALA SEQRES 11 R 249 ARG HIS SER GLU ILE LEU SER TYR GLY PRO LEU THR LEU SEQRES 12 R 249 ILE PRO GLU ARG PHE GLU ALA ILE TRP PHE ASN ARG THR SEQRES 13 R 249 VAL LYS LEU THR HIS LEU GLU PHE GLU LEU LEU HIS CYS SEQRES 14 R 249 LEU LEU GLN ARG HIS GLY GLN THR VAL ALA PRO SER GLU SEQRES 15 R 249 ILE LEU LYS GLU VAL TRP GLY TYR ASP PRO ASP ASP ASP SEQRES 16 R 249 ILE GLU THR ILE ARG VAL HIS ILE ARG HIS LEU ARG THR SEQRES 17 R 249 LYS LEU GLU PRO ASP PRO ARG HIS PRO ARG TYR ILE LYS SEQRES 18 R 249 THR VAL TYR GLY ALA GLY TYR CYS LEU GLU LEU PRO ALA SEQRES 19 R 249 GLU THR GLU LEU HIS GLN HIS ALA ASP GLN PHE PRO SER SEQRES 20 R 249 ALA SER SEQRES 1 S 249 MET LYS PRO ARG ILE LEU VAL ILE ASP ASP ASP SER ALA SEQRES 2 S 249 ILE LEU GLU LEU VAL ALA VAL ASN LEU GLU MET SER GLY SEQRES 3 S 249 TYR ASP VAL ARG LYS ALA GLU ASP GLY ILE LYS GLY GLN SEQRES 4 S 249 ALA LEU ALA VAL GLN LEU VAL PRO ASP LEU ILE MET LEU SEQRES 5 S 249 PHD LEU MET LEU PRO ARG VAL ASP GLY PHE THR VAL CYS SEQRES 6 S 249 GLN ARG LEU ARG ARG ASP GLU ARG THR ALA GLU ILE PRO SEQRES 7 S 249 VAL LEU MET LEU THR ALA LEU GLY GLN THR GLN ASP LYS SEQRES 8 S 249 VAL GLU GLY PHE ASN ALA GLY ALA ASP ASP TYR LEU THR SEQRES 9 S 249 LYS PRO PHE GLU VAL GLU GLU MET LEU ALA ARG VAL ARG SEQRES 10 S 249 ALA LEU LEU GLN ARG THR ASP ARG ILE PRO HIS ALA ALA SEQRES 11 S 249 ARG HIS SER GLU ILE LEU SER TYR GLY PRO LEU THR LEU SEQRES 12 S 249 ILE PRO GLU ARG PHE GLU ALA ILE TRP PHE ASN ARG THR SEQRES 13 S 249 VAL LYS LEU THR HIS LEU GLU PHE GLU LEU LEU HIS CYS SEQRES 14 S 249 LEU LEU GLN ARG HIS GLY GLN THR VAL ALA PRO SER GLU SEQRES 15 S 249 ILE LEU LYS GLU VAL TRP GLY TYR ASP PRO ASP ASP ASP SEQRES 16 S 249 ILE GLU THR ILE ARG VAL HIS ILE ARG HIS LEU ARG THR SEQRES 17 S 249 LYS LEU GLU PRO ASP PRO ARG HIS PRO ARG TYR ILE LYS SEQRES 18 S 249 THR VAL TYR GLY ALA GLY TYR CYS LEU GLU LEU PRO ALA SEQRES 19 S 249 GLU THR GLU LEU HIS GLN HIS ALA ASP GLN PHE PRO SER SEQRES 20 S 249 ALA SER SEQRES 1 G 399 MET THR GLN LEU ILE SER ILE ASP LYS GLU GLN GLU GLU SEQRES 2 G 399 ALA GLY MET THR GLN ALA THR GLU LEU LEU ASP PRO ALA SEQRES 3 G 399 LEU LYS PRO ALA GLU THR LYS ALA LYS ARG SER SER ARG SEQRES 4 G 399 LYS LYS ALA THR THR ALA VAL VAL GLU PRO ALA THR THR SEQRES 5 G 399 ILE ALA PRO THR ALA ASP VAL ASP ALA ILE ASP ASP GLU SEQRES 6 G 399 ASP SER VAL GLY GLU ASP GLU ASP ALA ALA ALA LYS ALA SEQRES 7 G 399 LYS ALA LYS VAL ARG LYS THR TYR THR GLU ASP SER ILE SEQRES 8 G 399 ARG LEU TYR LEU GLN GLU ILE GLY ARG ILE ARG LEU LEU SEQRES 9 G 399 ARG ALA ASP GLU GLU ILE GLU LEU ALA ARG GLN ILE ALA SEQRES 10 G 399 ASP LEU LEU ALA LEU GLU ARG ILE ARG ASP GLU LEU LEU SEQRES 11 G 399 GLU GLN LEU ASP ARG LEU PRO SER ASP ALA GLU TRP ALA SEQRES 12 G 399 ALA ALA VAL ASP SER PRO LEU ASP GLU PHE ARG ARG ARG SEQRES 13 G 399 LEU PHE ARG GLY ARG ARG ALA LYS ASP LYS MET VAL GLN SEQRES 14 G 399 SER ASN LEU ARG LEU VAL VAL SER ILE ALA LYS LYS TYR SEQRES 15 G 399 MET ASN ARG GLY LEU SER PHE GLN ASP LEU ILE GLN GLU SEQRES 16 G 399 GLY SER LEU GLY LEU ILE ARG ALA ALA GLU LYS PHE ASP SEQRES 17 G 399 HIS GLU LYS GLY TYR LYS PHE SER THR TYR ALA THR TRP SEQRES 18 G 399 TRP ILE ARG GLN ALA ILE THR ARG ALA ILE ALA ASP GLN SEQRES 19 G 399 SER ARG THR ILE ARG LEU PRO VAL HIS LEU TYR GLU THR SEQRES 20 G 399 ILE SER ARG ILE LYS LYS THR THR LYS LEU LEU SER GLN SEQRES 21 G 399 GLU MET GLY ARG LYS PRO THR GLU GLU GLU ILE ALA THR SEQRES 22 G 399 ARG MET GLU MET THR ILE GLU LYS LEU ARG PHE ILE ALA SEQRES 23 G 399 LYS SER ALA GLN LEU PRO ILE SER LEU GLU THR PRO ILE SEQRES 24 G 399 GLY LYS GLU GLU ASP SER ARG LEU GLY ASP PHE ILE GLU SEQRES 25 G 399 ALA ASP GLY GLU THR PRO GLU ASP GLU VAL ALA LYS ASN SEQRES 26 G 399 LEU LEU ARG GLU ASP LEU GLU GLY VAL LEU SER THR LEU SEQRES 27 G 399 SER PRO ARG GLU ARG ASP VAL LEU ARG LEU ARG TYR GLY SEQRES 28 G 399 LEU ASP ASP GLY ARG MET LYS THR LEU GLU GLU ILE GLY SEQRES 29 G 399 GLN LEU PHE ASN VAL THR ARG GLU ARG ILE ARG GLN ILE SEQRES 30 G 399 GLU ALA LYS ALA LEU ARG LYS LEU ARG HIS PRO ASN ARG SEQRES 31 G 399 ASN SER ILE LEU LYS GLU TYR ILE ARG MODRES 9DVT PHD R 53 ASP MODIFIED RESIDUE MODRES 9DVT PHD S 53 ASP MODIFIED RESIDUE HET PHD R 53 12 HET PHD S 53 12 HETNAM PHD ASPARTYL PHOSPHATE FORMUL 4 PHD 2(C4 H8 N O7 P) HELIX 1 AA1 PRO A 245 GLN A 250 5 6 HELIX 2 AA2 SER A 252 ALA A 262 1 11 HELIX 3 AA3 SER A 266 SER A 272 1 7 HELIX 4 AA4 THR A 274 ILE A 281 1 8 HELIX 5 AA5 GLY A 285 ILE A 299 1 15 HELIX 6 AA6 ASP R 11 SER R 25 1 15 HELIX 7 AA7 ASP R 34 VAL R 46 1 13 HELIX 8 AA8 ASP R 60 ASP R 71 1 12 HELIX 9 AA9 GLN R 87 PHE R 95 1 9 HELIX 10 AB1 GLU R 108 ASP R 124 1 17 HELIX 11 AB2 PRO R 145 ARG R 147 5 3 HELIX 12 AB3 THR R 160 ARG R 173 1 14 HELIX 13 AB4 ALA R 179 VAL R 187 1 9 HELIX 14 AB5 ILE R 196 GLU R 211 1 16 HELIX 15 AB6 ALA R 234 HIS R 241 5 8 HELIX 16 AB7 ASP S 11 SER S 25 1 15 HELIX 17 AB8 ASP S 34 VAL S 46 1 13 HELIX 18 AB9 ASP S 60 ASP S 71 1 12 HELIX 19 AC1 GLN S 87 GLY S 98 1 12 HELIX 20 AC2 GLU S 108 ASP S 124 1 17 HELIX 21 AC3 PRO S 145 ARG S 147 5 3 HELIX 22 AC4 THR S 160 ARG S 173 1 14 HELIX 23 AC5 ALA S 179 VAL S 187 1 9 HELIX 24 AC6 ILE S 196 GLU S 211 1 16 HELIX 25 AC7 ALA S 234 HIS S 241 5 8 HELIX 26 AC8 LYS G 324 LEU G 338 1 15 HELIX 27 AC9 SER G 339 GLY G 351 1 13 HELIX 28 AD1 THR G 359 PHE G 367 1 9 HELIX 29 AD2 ARG G 373 ARG G 386 1 14 HELIX 30 AD3 SER G 392 ILE G 398 5 7 SHEET 1 AA1 5 ASP R 28 ALA R 32 0 SHEET 2 AA1 5 ARG R 4 ILE R 8 1 N VAL R 7 O ARG R 30 SHEET 3 AA1 5 LEU R 49 PHD R 53 1 O MET R 51 N LEU R 6 SHEET 4 AA1 5 VAL R 79 THR R 83 1 O LEU R 80 N ILE R 50 SHEET 5 AA1 5 ASP R 101 THR R 104 1 O ASP R 101 N MET R 81 SHEET 1 AA2 4 SER R 137 TYR R 138 0 SHEET 2 AA2 4 LEU R 141 ILE R 144 -1 O LEU R 141 N TYR R 138 SHEET 3 AA2 4 GLU R 149 TRP R 152 -1 O GLU R 149 N ILE R 144 SHEET 4 AA2 4 ARG R 155 LYS R 158 -1 O ARG R 155 N TRP R 152 SHEET 1 AA3 3 THR R 177 VAL R 178 0 SHEET 2 AA3 3 GLY R 227 LEU R 230 -1 O TYR R 228 N VAL R 178 SHEET 3 AA3 3 ILE R 220 VAL R 223 -1 N LYS R 221 O CYS R 229 SHEET 1 AA4 5 ASP S 28 ALA S 32 0 SHEET 2 AA4 5 ARG S 4 ILE S 8 1 N VAL S 7 O ARG S 30 SHEET 3 AA4 5 LEU S 49 LEU S 52 1 O MET S 51 N LEU S 6 SHEET 4 AA4 5 VAL S 79 THR S 83 1 O LEU S 80 N ILE S 50 SHEET 5 AA4 5 ASP S 101 THR S 104 1 O ASP S 101 N MET S 81 SHEET 1 AA5 4 SER S 137 TYR S 138 0 SHEET 2 AA5 4 LEU S 141 ILE S 144 -1 O LEU S 141 N TYR S 138 SHEET 3 AA5 4 GLU S 149 TRP S 152 -1 O GLU S 149 N ILE S 144 SHEET 4 AA5 4 ARG S 155 LYS S 158 -1 O ARG S 155 N TRP S 152 SHEET 1 AA6 3 THR S 177 VAL S 178 0 SHEET 2 AA6 3 GLY S 227 LEU S 230 -1 O TYR S 228 N VAL S 178 SHEET 3 AA6 3 ILE S 220 VAL S 223 -1 O VAL S 223 N GLY S 227 LINK C LEU R 52 N PHD R 53 1555 1555 1.33 LINK C PHD R 53 N LEU R 54 1555 1555 1.33 LINK C LEU S 52 N PHD S 53 1555 1555 1.33 LINK C PHD S 53 N LEU S 54 1555 1555 1.33 CISPEP 1 LYS R 105 PRO R 106 0 -7.03 CISPEP 2 LYS S 105 PRO S 106 0 -6.84 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 TER 748 DT 1 45 TER 1478 DA 2 96 TER 1969 GLY A 300 HETATM 2365 N PHD R 53 318.898 362.886 264.228 1.00127.22 N HETATM 2366 CA PHD R 53 318.617 364.140 264.923 1.00127.22 C HETATM 2367 C PHD R 53 317.125 364.332 265.191 1.00127.22 C HETATM 2368 O PHD R 53 316.279 363.735 264.526 1.00127.22 O HETATM 2369 CB PHD R 53 319.169 365.322 264.118 1.00127.22 C HETATM 2370 CG PHD R 53 318.824 366.691 264.675 1.00127.22 C HETATM 2371 OD1 PHD R 53 318.867 366.732 265.973 1.00127.22 O HETATM 2372 OD2 PHD R 53 318.533 367.622 263.949 1.00127.22 O HETATM 2373 P PHD R 53 319.256 368.202 266.961 1.00127.22 P HETATM 2374 OP1 PHD R 53 320.039 367.505 268.053 1.00127.22 O HETATM 2375 OP2 PHD R 53 320.062 369.058 266.008 1.00127.22 O HETATM 2376 OP3 PHD R 53 317.891 368.721 267.352 1.00127.22 O TER 3874 GLN R 244 HETATM 4270 N PHD S 53 325.491 347.378 289.923 1.00119.78 N HETATM 4271 CA PHD S 53 326.356 348.382 290.539 1.00119.78 C HETATM 4272 C PHD S 53 327.812 348.257 290.102 1.00119.78 C HETATM 4273 O PHD S 53 328.232 347.226 289.583 1.00119.78 O HETATM 4274 CB PHD S 53 326.271 348.277 292.066 1.00119.78 C HETATM 4275 CG PHD S 53 327.068 349.310 292.841 1.00119.78 C HETATM 4276 OD1 PHD S 53 327.026 350.492 292.302 1.00119.78 O HETATM 4277 OD2 PHD S 53 327.681 349.002 293.845 1.00119.78 O HETATM 4278 P PHD S 53 327.840 351.981 292.948 1.00119.78 P HETATM 4279 OP1 PHD S 53 326.757 352.972 292.580 1.00119.78 O HETATM 4280 OP2 PHD S 53 328.004 351.702 294.426 1.00119.78 O HETATM 4281 OP3 PHD S 53 329.109 352.054 292.127 1.00119.78 O TER 5751 HIS S 241 TER 6375 ILE G 398 CONECT 2359 2365 CONECT 2365 2359 2366 CONECT 2366 2365 2367 2369 CONECT 2367 2366 2368 2377 CONECT 2368 2367 CONECT 2369 2366 2370 CONECT 2370 2369 2371 2372 CONECT 2371 2370 2373 CONECT 2372 2370 CONECT 2373 2371 2374 2375 2376 CONECT 2374 2373 CONECT 2375 2373 CONECT 2376 2373 CONECT 2377 2367 CONECT 4264 4270 CONECT 4270 4264 4271 CONECT 4271 4270 4272 4274 CONECT 4272 4271 4273 4282 CONECT 4273 4272 CONECT 4274 4271 4275 CONECT 4275 4274 4276 4277 CONECT 4276 4275 4278 CONECT 4277 4275 CONECT 4278 4276 4279 4280 4281 CONECT 4279 4278 CONECT 4280 4278 CONECT 4281 4278 CONECT 4282 4272 MASTER 942 0 2 30 24 0 0 6 6369 6 28 113 END