data_9E6Y # _entry.id 9E6Y # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.404 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 9E6Y pdb_00009e6y 10.2210/pdb9e6y/pdb WWPDB D_1000287861 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date _pdbx_audit_revision_history.part_number 1 'Structure model' 1 0 2025-05-07 ? 2 'Structure model' 1 1 2025-08-20 ? # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # _pdbx_audit_revision_group.ordinal 1 _pdbx_audit_revision_group.revision_ordinal 2 _pdbx_audit_revision_group.data_content_type 'Structure model' _pdbx_audit_revision_group.group 'Database references' # _pdbx_audit_revision_category.ordinal 1 _pdbx_audit_revision_category.revision_ordinal 2 _pdbx_audit_revision_category.data_content_type 'Structure model' _pdbx_audit_revision_category.category citation # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.journal_volume' 2 2 'Structure model' '_citation.page_first' 3 2 'Structure model' '_citation.page_last' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 9E6Y _pdbx_database_status.recvd_initial_deposition_date 2024-10-31 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # _pdbx_database_related.db_name PDB _pdbx_database_related.details . _pdbx_database_related.db_id 4DFH _pdbx_database_related.content_type unspecified # loop_ _pdbx_contact_author.id _pdbx_contact_author.email _pdbx_contact_author.name_first _pdbx_contact_author.name_last _pdbx_contact_author.name_mi _pdbx_contact_author.role _pdbx_contact_author.identifier_ORCID 2 vince.luca@moffitt.org Vincent Luca Christopher 'principal investigator/group leader' 0000-0001-9427-5520 3 srishti.singh@moffitt.org Srishti Singh ? 'principal investigator/group leader' 0000-0003-0599-7156 # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Luca, V.C.' 1 0000-0001-9427-5520 'Singh, S.' 2 0000-0003-0599-7156 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev Mol.Ther. _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 1525-0024 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 33 _citation.language ? _citation.page_first 3590 _citation.page_last 3604 _citation.title 'Structure-guided engineering of CD112 receptor variants for optimized immunotherapy.' _citation.year 2025 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1016/j.ymthe.2025.04.032 _citation.pdbx_database_id_PubMed 40285356 _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Singh, S.' 1 ? primary 'Julia, E.' 2 ? primary 'Kalita, P.' 3 ? primary 'Mason, C.' 4 ? primary 'Ming, Q.' 5 ? primary 'Lee-Sam, A.' 6 ? primary 'Gordon, S.' 7 ? primary 'Buitrago, M.E.' 8 ? primary 'Leung, D.W.' 9 ? primary 'Hwu, P.' 10 ? primary 'Luca, V.C.' 11 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man Nectin-2 14399.339 1 ? ? ? ? 2 polymer man 'Transmembrane protein PVRIG' 13942.655 1 ? ? ? ? 3 non-polymer syn 1,2-ETHANEDIOL 62.068 11 ? ? ? ? 4 non-polymer syn 2-acetamido-2-deoxy-beta-D-glucopyranose 221.208 1 ? ? ? ? 5 water nat water 18.015 105 ? ? ? ? # loop_ _entity_name_com.entity_id _entity_name_com.name 1 ;Herpes virus entry mediator B,Herpesvirus entry mediator B,HveB,Nectin cell adhesion molecule 2,Poliovirus receptor-related protein 2 ; 2 'CD112 receptor,CD112R,Poliovirus receptor-related immunoglobulin domain-containing protein' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;QDVRVQVLPEVRGQLGGTVELPCHLLPPVPGLYISLVTWQRPDAPANHQNVAAFHPKMGPSFPSPKPGSERLSFVSAKQS TGQDTEAELQDATLALHGLTVEDEGNYTCEFATFPKGSVRGMTWLRVLVPRL ; ;QDVRVQVLPEVRGQLGGTVELPCHLLPPVPGLYISLVTWQRPDAPANHQNVAAFHPKMGPSFPSPKPGSERLSFVSAKQS TGQDTEAELQDATLALHGLTVEDEGNYTCEFATFPKGSVRGMTWLRVLVPRL ; D ? 2 'polypeptide(L)' no no ;TPEVWVQVRMEATELSSFTIRCGFLGSGSISLVTVSWGGPNGAGGTTLAVLHPERGIRQWAPARQARWETQSSISLILEG SGASSPCANTTFCCKFASFPEGSWEACGSLPPSSDPGLSAPPTPAPILRADLR ; ;TPEVWVQVRMEATELSSFTIRCGFLGSGSISLVTVSWGGPNGAGGTTLAVLHPERGIRQWAPARQARWETQSSISLILEG SGASSPCANTTFCCKFASFPEGSWEACGSLPPSSDPGLSAPPTPAPILRADLR ; A ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 1,2-ETHANEDIOL EDO 4 2-acetamido-2-deoxy-beta-D-glucopyranose NAG 5 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLN n 1 2 ASP n 1 3 VAL n 1 4 ARG n 1 5 VAL n 1 6 GLN n 1 7 VAL n 1 8 LEU n 1 9 PRO n 1 10 GLU n 1 11 VAL n 1 12 ARG n 1 13 GLY n 1 14 GLN n 1 15 LEU n 1 16 GLY n 1 17 GLY n 1 18 THR n 1 19 VAL n 1 20 GLU n 1 21 LEU n 1 22 PRO n 1 23 CYS n 1 24 HIS n 1 25 LEU n 1 26 LEU n 1 27 PRO n 1 28 PRO n 1 29 VAL n 1 30 PRO n 1 31 GLY n 1 32 LEU n 1 33 TYR n 1 34 ILE n 1 35 SER n 1 36 LEU n 1 37 VAL n 1 38 THR n 1 39 TRP n 1 40 GLN n 1 41 ARG n 1 42 PRO n 1 43 ASP n 1 44 ALA n 1 45 PRO n 1 46 ALA n 1 47 ASN n 1 48 HIS n 1 49 GLN n 1 50 ASN n 1 51 VAL n 1 52 ALA n 1 53 ALA n 1 54 PHE n 1 55 HIS n 1 56 PRO n 1 57 LYS n 1 58 MET n 1 59 GLY n 1 60 PRO n 1 61 SER n 1 62 PHE n 1 63 PRO n 1 64 SER n 1 65 PRO n 1 66 LYS n 1 67 PRO n 1 68 GLY n 1 69 SER n 1 70 GLU n 1 71 ARG n 1 72 LEU n 1 73 SER n 1 74 PHE n 1 75 VAL n 1 76 SER n 1 77 ALA n 1 78 LYS n 1 79 GLN n 1 80 SER n 1 81 THR n 1 82 GLY n 1 83 GLN n 1 84 ASP n 1 85 THR n 1 86 GLU n 1 87 ALA n 1 88 GLU n 1 89 LEU n 1 90 GLN n 1 91 ASP n 1 92 ALA n 1 93 THR n 1 94 LEU n 1 95 ALA n 1 96 LEU n 1 97 HIS n 1 98 GLY n 1 99 LEU n 1 100 THR n 1 101 VAL n 1 102 GLU n 1 103 ASP n 1 104 GLU n 1 105 GLY n 1 106 ASN n 1 107 TYR n 1 108 THR n 1 109 CYS n 1 110 GLU n 1 111 PHE n 1 112 ALA n 1 113 THR n 1 114 PHE n 1 115 PRO n 1 116 LYS n 1 117 GLY n 1 118 SER n 1 119 VAL n 1 120 ARG n 1 121 GLY n 1 122 MET n 1 123 THR n 1 124 TRP n 1 125 LEU n 1 126 ARG n 1 127 VAL n 1 128 LEU n 1 129 VAL n 1 130 PRO n 1 131 ARG n 1 132 LEU n 2 1 THR n 2 2 PRO n 2 3 GLU n 2 4 VAL n 2 5 TRP n 2 6 VAL n 2 7 GLN n 2 8 VAL n 2 9 ARG n 2 10 MET n 2 11 GLU n 2 12 ALA n 2 13 THR n 2 14 GLU n 2 15 LEU n 2 16 SER n 2 17 SER n 2 18 PHE n 2 19 THR n 2 20 ILE n 2 21 ARG n 2 22 CYS n 2 23 GLY n 2 24 PHE n 2 25 LEU n 2 26 GLY n 2 27 SER n 2 28 GLY n 2 29 SER n 2 30 ILE n 2 31 SER n 2 32 LEU n 2 33 VAL n 2 34 THR n 2 35 VAL n 2 36 SER n 2 37 TRP n 2 38 GLY n 2 39 GLY n 2 40 PRO n 2 41 ASN n 2 42 GLY n 2 43 ALA n 2 44 GLY n 2 45 GLY n 2 46 THR n 2 47 THR n 2 48 LEU n 2 49 ALA n 2 50 VAL n 2 51 LEU n 2 52 HIS n 2 53 PRO n 2 54 GLU n 2 55 ARG n 2 56 GLY n 2 57 ILE n 2 58 ARG n 2 59 GLN n 2 60 TRP n 2 61 ALA n 2 62 PRO n 2 63 ALA n 2 64 ARG n 2 65 GLN n 2 66 ALA n 2 67 ARG n 2 68 TRP n 2 69 GLU n 2 70 THR n 2 71 GLN n 2 72 SER n 2 73 SER n 2 74 ILE n 2 75 SER n 2 76 LEU n 2 77 ILE n 2 78 LEU n 2 79 GLU n 2 80 GLY n 2 81 SER n 2 82 GLY n 2 83 ALA n 2 84 SER n 2 85 SER n 2 86 PRO n 2 87 CYS n 2 88 ALA n 2 89 ASN n 2 90 THR n 2 91 THR n 2 92 PHE n 2 93 CYS n 2 94 CYS n 2 95 LYS n 2 96 PHE n 2 97 ALA n 2 98 SER n 2 99 PHE n 2 100 PRO n 2 101 GLU n 2 102 GLY n 2 103 SER n 2 104 TRP n 2 105 GLU n 2 106 ALA n 2 107 CYS n 2 108 GLY n 2 109 SER n 2 110 LEU n 2 111 PRO n 2 112 PRO n 2 113 SER n 2 114 SER n 2 115 ASP n 2 116 PRO n 2 117 GLY n 2 118 LEU n 2 119 SER n 2 120 ALA n 2 121 PRO n 2 122 PRO n 2 123 THR n 2 124 PRO n 2 125 ALA n 2 126 PRO n 2 127 ILE n 2 128 LEU n 2 129 ARG n 2 130 ALA n 2 131 ASP n 2 132 LEU n 2 133 ARG n # loop_ _entity_src_gen.entity_id _entity_src_gen.pdbx_src_id _entity_src_gen.pdbx_alt_source_flag _entity_src_gen.pdbx_seq_type _entity_src_gen.pdbx_beg_seq_num _entity_src_gen.pdbx_end_seq_num _entity_src_gen.gene_src_common_name _entity_src_gen.gene_src_genus _entity_src_gen.pdbx_gene_src_gene _entity_src_gen.gene_src_species _entity_src_gen.gene_src_strain _entity_src_gen.gene_src_tissue _entity_src_gen.gene_src_tissue_fraction _entity_src_gen.gene_src_details _entity_src_gen.pdbx_gene_src_fragment _entity_src_gen.pdbx_gene_src_scientific_name _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id _entity_src_gen.pdbx_gene_src_variant _entity_src_gen.pdbx_gene_src_cell_line _entity_src_gen.pdbx_gene_src_atcc _entity_src_gen.pdbx_gene_src_organ _entity_src_gen.pdbx_gene_src_organelle _entity_src_gen.pdbx_gene_src_cell _entity_src_gen.pdbx_gene_src_cellular_location _entity_src_gen.host_org_common_name _entity_src_gen.pdbx_host_org_scientific_name _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id _entity_src_gen.host_org_genus _entity_src_gen.pdbx_host_org_gene _entity_src_gen.pdbx_host_org_organ _entity_src_gen.host_org_species _entity_src_gen.pdbx_host_org_tissue _entity_src_gen.pdbx_host_org_tissue_fraction _entity_src_gen.pdbx_host_org_strain _entity_src_gen.pdbx_host_org_variant _entity_src_gen.pdbx_host_org_cell_line _entity_src_gen.pdbx_host_org_atcc _entity_src_gen.pdbx_host_org_culture_collection _entity_src_gen.pdbx_host_org_cell _entity_src_gen.pdbx_host_org_organelle _entity_src_gen.pdbx_host_org_cellular_location _entity_src_gen.pdbx_host_org_vector_type _entity_src_gen.pdbx_host_org_vector _entity_src_gen.host_org_details _entity_src_gen.expression_system_id _entity_src_gen.plasmid_name _entity_src_gen.plasmid_details _entity_src_gen.pdbx_description 1 1 sample 'Biological sequence' 1 132 human ? 'NECTIN2, HVEB, PRR2, PVRL2' ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? 'Escherichia coli' 562 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 2 1 sample 'Biological sequence' 1 133 human ? 'PVRIG, C7orf15' ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? 'Trichoplusia ni' 7111 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 EDO non-polymer . 1,2-ETHANEDIOL 'ETHYLENE GLYCOL' 'C2 H6 O2' 62.068 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NAG 'D-saccharide, beta linking' . 2-acetamido-2-deoxy-beta-D-glucopyranose ;N-acetyl-beta-D-glucosamine; 2-acetamido-2-deoxy-beta-D-glucose; 2-acetamido-2-deoxy-D-glucose; 2-acetamido-2-deoxy-glucose; N-ACETYL-D-GLUCOSAMINE ; 'C8 H15 N O6' 221.208 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier NAG 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGlcpNAcb NAG 'COMMON NAME' GMML 1.0 N-acetyl-b-D-glucopyranosamine NAG 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-GlcpNAc NAG 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 GlcNAc # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLN 1 32 ? ? ? D . n A 1 2 ASP 2 33 ? ? ? D . n A 1 3 VAL 3 34 34 VAL VAL D . n A 1 4 ARG 4 35 35 ARG ARG D . n A 1 5 VAL 5 36 36 VAL VAL D . n A 1 6 GLN 6 37 37 GLN GLN D . n A 1 7 VAL 7 38 38 VAL VAL D . n A 1 8 LEU 8 39 39 LEU LEU D . n A 1 9 PRO 9 40 40 PRO PRO D . n A 1 10 GLU 10 41 41 GLU GLU D . n A 1 11 VAL 11 42 42 VAL VAL D . n A 1 12 ARG 12 43 43 ARG ARG D . n A 1 13 GLY 13 44 44 GLY GLY D . n A 1 14 GLN 14 45 45 GLN GLN D . n A 1 15 LEU 15 46 46 LEU LEU D . n A 1 16 GLY 16 47 47 GLY GLY D . n A 1 17 GLY 17 48 48 GLY GLY D . n A 1 18 THR 18 49 49 THR THR D . n A 1 19 VAL 19 50 50 VAL VAL D . n A 1 20 GLU 20 51 51 GLU GLU D . n A 1 21 LEU 21 52 52 LEU LEU D . n A 1 22 PRO 22 53 53 PRO PRO D . n A 1 23 CYS 23 54 54 CYS CYS D . n A 1 24 HIS 24 55 55 HIS HIS D . n A 1 25 LEU 25 56 56 LEU LEU D . n A 1 26 LEU 26 57 57 LEU LEU D . n A 1 27 PRO 27 58 58 PRO PRO D . n A 1 28 PRO 28 59 59 PRO PRO D . n A 1 29 VAL 29 60 60 VAL VAL D . n A 1 30 PRO 30 61 61 PRO PRO D . n A 1 31 GLY 31 62 62 GLY GLY D . n A 1 32 LEU 32 63 63 LEU LEU D . n A 1 33 TYR 33 64 64 TYR TYR D . n A 1 34 ILE 34 65 65 ILE ILE D . n A 1 35 SER 35 66 66 SER SER D . n A 1 36 LEU 36 67 67 LEU LEU D . n A 1 37 VAL 37 68 68 VAL VAL D . n A 1 38 THR 38 69 69 THR THR D . n A 1 39 TRP 39 70 70 TRP TRP D . n A 1 40 GLN 40 71 71 GLN GLN D . n A 1 41 ARG 41 72 72 ARG ARG D . n A 1 42 PRO 42 73 73 PRO PRO D . n A 1 43 ASP 43 74 74 ASP ASP D . n A 1 44 ALA 44 75 75 ALA ALA D . n A 1 45 PRO 45 76 76 PRO PRO D . n A 1 46 ALA 46 77 77 ALA ALA D . n A 1 47 ASN 47 78 78 ASN ASN D . n A 1 48 HIS 48 79 79 HIS HIS D . n A 1 49 GLN 49 80 80 GLN GLN D . n A 1 50 ASN 50 81 81 ASN ASN D . n A 1 51 VAL 51 82 82 VAL VAL D . n A 1 52 ALA 52 83 83 ALA ALA D . n A 1 53 ALA 53 84 84 ALA ALA D . n A 1 54 PHE 54 85 85 PHE PHE D . n A 1 55 HIS 55 86 86 HIS HIS D . n A 1 56 PRO 56 87 87 PRO PRO D . n A 1 57 LYS 57 88 88 LYS LYS D . n A 1 58 MET 58 89 89 MET MET D . n A 1 59 GLY 59 90 90 GLY GLY D . n A 1 60 PRO 60 91 91 PRO PRO D . n A 1 61 SER 61 92 92 SER SER D . n A 1 62 PHE 62 93 93 PHE PHE D . n A 1 63 PRO 63 94 94 PRO PRO D . n A 1 64 SER 64 95 95 SER SER D . n A 1 65 PRO 65 96 96 PRO PRO D . n A 1 66 LYS 66 97 97 LYS LYS D . n A 1 67 PRO 67 98 98 PRO PRO D . n A 1 68 GLY 68 99 99 GLY GLY D . n A 1 69 SER 69 100 100 SER SER D . n A 1 70 GLU 70 101 101 GLU GLU D . n A 1 71 ARG 71 102 102 ARG ARG D . n A 1 72 LEU 72 103 103 LEU LEU D . n A 1 73 SER 73 104 104 SER SER D . n A 1 74 PHE 74 105 105 PHE PHE D . n A 1 75 VAL 75 106 106 VAL VAL D . n A 1 76 SER 76 107 107 SER SER D . n A 1 77 ALA 77 108 108 ALA ALA D . n A 1 78 LYS 78 109 109 LYS LYS D . n A 1 79 GLN 79 110 110 GLN GLN D . n A 1 80 SER 80 111 111 SER SER D . n A 1 81 THR 81 112 112 THR THR D . n A 1 82 GLY 82 113 113 GLY GLY D . n A 1 83 GLN 83 114 114 GLN GLN D . n A 1 84 ASP 84 115 115 ASP ASP D . n A 1 85 THR 85 116 116 THR THR D . n A 1 86 GLU 86 117 117 GLU GLU D . n A 1 87 ALA 87 118 118 ALA ALA D . n A 1 88 GLU 88 119 119 GLU GLU D . n A 1 89 LEU 89 120 120 LEU LEU D . n A 1 90 GLN 90 121 121 GLN GLN D . n A 1 91 ASP 91 122 122 ASP ASP D . n A 1 92 ALA 92 123 123 ALA ALA D . n A 1 93 THR 93 124 124 THR THR D . n A 1 94 LEU 94 125 125 LEU LEU D . n A 1 95 ALA 95 126 126 ALA ALA D . n A 1 96 LEU 96 127 127 LEU LEU D . n A 1 97 HIS 97 128 128 HIS HIS D . n A 1 98 GLY 98 129 129 GLY GLY D . n A 1 99 LEU 99 130 130 LEU LEU D . n A 1 100 THR 100 131 131 THR THR D . n A 1 101 VAL 101 132 132 VAL VAL D . n A 1 102 GLU 102 133 133 GLU GLU D . n A 1 103 ASP 103 134 134 ASP ASP D . n A 1 104 GLU 104 135 135 GLU GLU D . n A 1 105 GLY 105 136 136 GLY GLY D . n A 1 106 ASN 106 137 137 ASN ASN D . n A 1 107 TYR 107 138 138 TYR TYR D . n A 1 108 THR 108 139 139 THR THR D . n A 1 109 CYS 109 140 140 CYS CYS D . n A 1 110 GLU 110 141 141 GLU GLU D . n A 1 111 PHE 111 142 142 PHE PHE D . n A 1 112 ALA 112 143 143 ALA ALA D . n A 1 113 THR 113 144 144 THR THR D . n A 1 114 PHE 114 145 145 PHE PHE D . n A 1 115 PRO 115 146 146 PRO PRO D . n A 1 116 LYS 116 147 147 LYS LYS D . n A 1 117 GLY 117 148 148 GLY GLY D . n A 1 118 SER 118 149 149 SER SER D . n A 1 119 VAL 119 150 150 VAL VAL D . n A 1 120 ARG 120 151 151 ARG ARG D . n A 1 121 GLY 121 152 152 GLY GLY D . n A 1 122 MET 122 153 153 MET MET D . n A 1 123 THR 123 154 154 THR THR D . n A 1 124 TRP 124 155 155 TRP TRP D . n A 1 125 LEU 125 156 156 LEU LEU D . n A 1 126 ARG 126 157 157 ARG ARG D . n A 1 127 VAL 127 158 158 VAL VAL D . n A 1 128 LEU 128 159 159 LEU LEU D . n A 1 129 VAL 129 160 160 VAL VAL D . n A 1 130 PRO 130 161 161 PRO PRO D . n A 1 131 ARG 131 162 162 ARG ARG D . n A 1 132 LEU 132 163 163 LEU LEU D . n B 2 1 THR 1 1 1 THR THR A . n B 2 2 PRO 2 2 2 PRO PRO A . n B 2 3 GLU 3 3 3 GLU GLU A . n B 2 4 VAL 4 4 4 VAL VAL A . n B 2 5 TRP 5 5 5 TRP TRP A . n B 2 6 VAL 6 6 6 VAL VAL A . n B 2 7 GLN 7 7 7 GLN GLN A . n B 2 8 VAL 8 8 8 VAL VAL A . n B 2 9 ARG 9 9 9 ARG ARG A . n B 2 10 MET 10 10 10 MET MET A . n B 2 11 GLU 11 11 11 GLU GLU A . n B 2 12 ALA 12 12 12 ALA ALA A . n B 2 13 THR 13 13 13 THR THR A . n B 2 14 GLU 14 14 14 GLU GLU A . n B 2 15 LEU 15 15 15 LEU LEU A . n B 2 16 SER 16 16 16 SER SER A . n B 2 17 SER 17 17 17 SER SER A . n B 2 18 PHE 18 18 18 PHE PHE A . n B 2 19 THR 19 19 19 THR THR A . n B 2 20 ILE 20 20 20 ILE ILE A . n B 2 21 ARG 21 21 21 ARG ARG A . n B 2 22 CYS 22 22 22 CYS CYS A . n B 2 23 GLY 23 23 23 GLY GLY A . n B 2 24 PHE 24 24 24 PHE PHE A . n B 2 25 LEU 25 25 25 LEU LEU A . n B 2 26 GLY 26 26 26 GLY GLY A . n B 2 27 SER 27 27 27 SER SER A . n B 2 28 GLY 28 28 28 GLY GLY A . n B 2 29 SER 29 29 29 SER SER A . n B 2 30 ILE 30 30 30 ILE ILE A . n B 2 31 SER 31 31 31 SER SER A . n B 2 32 LEU 32 32 32 LEU LEU A . n B 2 33 VAL 33 33 33 VAL VAL A . n B 2 34 THR 34 34 34 THR THR A . n B 2 35 VAL 35 35 35 VAL VAL A . n B 2 36 SER 36 36 36 SER SER A . n B 2 37 TRP 37 37 37 TRP TRP A . n B 2 38 GLY 38 38 38 GLY GLY A . n B 2 39 GLY 39 39 39 GLY GLY A . n B 2 40 PRO 40 40 40 PRO PRO A . n B 2 41 ASN 41 41 41 ASN ASN A . n B 2 42 GLY 42 42 42 GLY GLY A . n B 2 43 ALA 43 43 43 ALA ALA A . n B 2 44 GLY 44 44 44 GLY GLY A . n B 2 45 GLY 45 45 45 GLY GLY A . n B 2 46 THR 46 46 46 THR THR A . n B 2 47 THR 47 47 47 THR THR A . n B 2 48 LEU 48 48 48 LEU LEU A . n B 2 49 ALA 49 49 49 ALA ALA A . n B 2 50 VAL 50 50 50 VAL VAL A . n B 2 51 LEU 51 51 51 LEU LEU A . n B 2 52 HIS 52 52 52 HIS HIS A . n B 2 53 PRO 53 53 53 PRO PRO A . n B 2 54 GLU 54 54 54 GLU GLU A . n B 2 55 ARG 55 55 55 ARG ARG A . n B 2 56 GLY 56 56 56 GLY GLY A . n B 2 57 ILE 57 57 57 ILE ILE A . n B 2 58 ARG 58 58 58 ARG ARG A . n B 2 59 GLN 59 59 59 GLN GLN A . n B 2 60 TRP 60 60 60 TRP TRP A . n B 2 61 ALA 61 61 61 ALA ALA A . n B 2 62 PRO 62 62 62 PRO PRO A . n B 2 63 ALA 63 63 63 ALA ALA A . n B 2 64 ARG 64 64 64 ARG ARG A . n B 2 65 GLN 65 65 65 GLN GLN A . n B 2 66 ALA 66 66 66 ALA ALA A . n B 2 67 ARG 67 67 67 ARG ARG A . n B 2 68 TRP 68 68 68 TRP TRP A . n B 2 69 GLU 69 69 69 GLU GLU A . n B 2 70 THR 70 70 70 THR THR A . n B 2 71 GLN 71 71 71 GLN GLN A . n B 2 72 SER 72 72 72 SER SER A . n B 2 73 SER 73 73 73 SER SER A . n B 2 74 ILE 74 74 74 ILE ILE A . n B 2 75 SER 75 75 75 SER SER A . n B 2 76 LEU 76 76 76 LEU LEU A . n B 2 77 ILE 77 77 77 ILE ILE A . n B 2 78 LEU 78 78 78 LEU LEU A . n B 2 79 GLU 79 79 79 GLU GLU A . n B 2 80 GLY 80 80 80 GLY GLY A . n B 2 81 SER 81 81 ? ? ? A . n B 2 82 GLY 82 82 ? ? ? A . n B 2 83 ALA 83 83 ? ? ? A . n B 2 84 SER 84 84 ? ? ? A . n B 2 85 SER 85 85 ? ? ? A . n B 2 86 PRO 86 86 86 PRO PRO A . n B 2 87 CYS 87 87 87 CYS CYS A . n B 2 88 ALA 88 88 88 ALA ALA A . n B 2 89 ASN 89 89 89 ASN ASN A . n B 2 90 THR 90 90 90 THR THR A . n B 2 91 THR 91 91 91 THR THR A . n B 2 92 PHE 92 92 92 PHE PHE A . n B 2 93 CYS 93 93 93 CYS CYS A . n B 2 94 CYS 94 94 94 CYS CYS A . n B 2 95 LYS 95 95 95 LYS LYS A . n B 2 96 PHE 96 96 96 PHE PHE A . n B 2 97 ALA 97 97 97 ALA ALA A . n B 2 98 SER 98 98 98 SER SER A . n B 2 99 PHE 99 99 99 PHE PHE A . n B 2 100 PRO 100 100 100 PRO PRO A . n B 2 101 GLU 101 101 101 GLU GLU A . n B 2 102 GLY 102 102 102 GLY GLY A . n B 2 103 SER 103 103 103 SER SER A . n B 2 104 TRP 104 104 104 TRP TRP A . n B 2 105 GLU 105 105 105 GLU GLU A . n B 2 106 ALA 106 106 106 ALA ALA A . n B 2 107 CYS 107 107 107 CYS CYS A . n B 2 108 GLY 108 108 108 GLY GLY A . n B 2 109 SER 109 109 109 SER SER A . n B 2 110 LEU 110 110 110 LEU LEU A . n B 2 111 PRO 111 111 111 PRO PRO A . n B 2 112 PRO 112 112 112 PRO PRO A . n B 2 113 SER 113 113 113 SER SER A . n B 2 114 SER 114 114 ? ? ? A . n B 2 115 ASP 115 115 ? ? ? A . n B 2 116 PRO 116 116 ? ? ? A . n B 2 117 GLY 117 117 ? ? ? A . n B 2 118 LEU 118 118 ? ? ? A . n B 2 119 SER 119 119 ? ? ? A . n B 2 120 ALA 120 120 ? ? ? A . n B 2 121 PRO 121 121 ? ? ? A . n B 2 122 PRO 122 122 ? ? ? A . n B 2 123 THR 123 123 ? ? ? A . n B 2 124 PRO 124 124 ? ? ? A . n B 2 125 ALA 125 125 ? ? ? A . n B 2 126 PRO 126 126 ? ? ? A . n B 2 127 ILE 127 127 ? ? ? A . n B 2 128 LEU 128 128 ? ? ? A . n B 2 129 ARG 129 129 ? ? ? A . n B 2 130 ALA 130 130 ? ? ? A . n B 2 131 ASP 131 131 ? ? ? A . n B 2 132 LEU 132 132 ? ? ? A . n B 2 133 ARG 133 133 ? ? ? A . n # loop_ _pdbx_entity_instance_feature.ordinal _pdbx_entity_instance_feature.comp_id _pdbx_entity_instance_feature.asym_id _pdbx_entity_instance_feature.seq_num _pdbx_entity_instance_feature.auth_comp_id _pdbx_entity_instance_feature.auth_asym_id _pdbx_entity_instance_feature.auth_seq_num _pdbx_entity_instance_feature.feature_type _pdbx_entity_instance_feature.details 1 NAG ? ? NAG ? ? 'SUBJECT OF INVESTIGATION' ? 2 EDO ? ? EDO ? ? 'SUBJECT OF INVESTIGATION' ? # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 EDO 1 201 201 EDO EDO D . D 3 EDO 1 202 202 EDO EDO D . E 3 EDO 1 203 203 EDO EDO D . F 3 EDO 1 204 204 EDO EDO D . G 3 EDO 1 205 4 EDO EDO D . H 3 EDO 1 206 8 EDO EDO D . I 4 NAG 1 201 114 NAG NAG A . J 3 EDO 1 202 115 EDO EDO A . K 3 EDO 1 203 3 EDO EDO A . L 3 EDO 1 204 5 EDO EDO A . M 3 EDO 1 205 7 EDO EDO A . N 3 EDO 1 206 9 EDO EDO A . O 5 HOH 1 301 204 HOH HOH D . O 5 HOH 2 302 156 HOH HOH D . O 5 HOH 3 303 86 HOH HOH D . O 5 HOH 4 304 191 HOH HOH D . O 5 HOH 5 305 247 HOH HOH D . O 5 HOH 6 306 34 HOH HOH D . O 5 HOH 7 307 76 HOH HOH D . O 5 HOH 8 308 193 HOH HOH D . O 5 HOH 9 309 10 HOH HOH D . O 5 HOH 10 310 228 HOH HOH D . O 5 HOH 11 311 39 HOH HOH D . O 5 HOH 12 312 195 HOH HOH D . O 5 HOH 13 313 37 HOH HOH D . O 5 HOH 14 314 121 HOH HOH D . O 5 HOH 15 315 45 HOH HOH D . O 5 HOH 16 316 196 HOH HOH D . O 5 HOH 17 317 105 HOH HOH D . O 5 HOH 18 318 69 HOH HOH D . O 5 HOH 19 319 96 HOH HOH D . O 5 HOH 20 320 57 HOH HOH D . O 5 HOH 21 321 114 HOH HOH D . O 5 HOH 22 322 15 HOH HOH D . O 5 HOH 23 323 60 HOH HOH D . O 5 HOH 24 324 55 HOH HOH D . O 5 HOH 25 325 71 HOH HOH D . O 5 HOH 26 326 136 HOH HOH D . O 5 HOH 27 327 129 HOH HOH D . O 5 HOH 28 328 186 HOH HOH D . O 5 HOH 29 329 226 HOH HOH D . O 5 HOH 30 330 171 HOH HOH D . O 5 HOH 31 331 192 HOH HOH D . O 5 HOH 32 332 65 HOH HOH D . O 5 HOH 33 333 183 HOH HOH D . O 5 HOH 34 334 58 HOH HOH D . O 5 HOH 35 335 14 HOH HOH D . O 5 HOH 36 336 31 HOH HOH D . O 5 HOH 37 337 184 HOH HOH D . O 5 HOH 38 338 248 HOH HOH D . O 5 HOH 39 339 97 HOH HOH D . O 5 HOH 40 340 40 HOH HOH D . O 5 HOH 41 341 28 HOH HOH D . O 5 HOH 42 342 167 HOH HOH D . O 5 HOH 43 343 190 HOH HOH D . O 5 HOH 44 344 3 HOH HOH D . O 5 HOH 45 345 26 HOH HOH D . O 5 HOH 46 346 94 HOH HOH D . O 5 HOH 47 347 8 HOH HOH D . O 5 HOH 48 348 32 HOH HOH D . O 5 HOH 49 349 246 HOH HOH D . O 5 HOH 50 350 230 HOH HOH D . O 5 HOH 51 351 175 HOH HOH D . O 5 HOH 52 352 17 HOH HOH D . O 5 HOH 53 353 232 HOH HOH D . O 5 HOH 54 354 67 HOH HOH D . O 5 HOH 55 355 9 HOH HOH D . O 5 HOH 56 356 234 HOH HOH D . O 5 HOH 57 357 90 HOH HOH D . O 5 HOH 58 358 135 HOH HOH D . O 5 HOH 59 359 106 HOH HOH D . O 5 HOH 60 360 79 HOH HOH D . P 5 HOH 1 301 103 HOH HOH A . P 5 HOH 2 302 62 HOH HOH A . P 5 HOH 3 303 117 HOH HOH A . P 5 HOH 4 304 218 HOH HOH A . P 5 HOH 5 305 210 HOH HOH A . P 5 HOH 6 306 11 HOH HOH A . P 5 HOH 7 307 81 HOH HOH A . P 5 HOH 8 308 208 HOH HOH A . P 5 HOH 9 309 200 HOH HOH A . P 5 HOH 10 310 194 HOH HOH A . P 5 HOH 11 311 202 HOH HOH A . P 5 HOH 12 312 24 HOH HOH A . P 5 HOH 13 313 92 HOH HOH A . P 5 HOH 14 314 198 HOH HOH A . P 5 HOH 15 315 72 HOH HOH A . P 5 HOH 16 316 95 HOH HOH A . P 5 HOH 17 317 107 HOH HOH A . P 5 HOH 18 318 51 HOH HOH A . P 5 HOH 19 319 73 HOH HOH A . P 5 HOH 20 320 201 HOH HOH A . P 5 HOH 21 321 44 HOH HOH A . P 5 HOH 22 322 217 HOH HOH A . P 5 HOH 23 323 16 HOH HOH A . P 5 HOH 24 324 50 HOH HOH A . P 5 HOH 25 325 157 HOH HOH A . P 5 HOH 26 326 85 HOH HOH A . P 5 HOH 27 327 19 HOH HOH A . P 5 HOH 28 328 197 HOH HOH A . P 5 HOH 29 329 149 HOH HOH A . P 5 HOH 30 330 185 HOH HOH A . P 5 HOH 31 331 216 HOH HOH A . P 5 HOH 32 332 203 HOH HOH A . P 5 HOH 33 333 241 HOH HOH A . P 5 HOH 34 334 47 HOH HOH A . P 5 HOH 35 335 118 HOH HOH A . P 5 HOH 36 336 4 HOH HOH A . P 5 HOH 37 337 83 HOH HOH A . P 5 HOH 38 338 52 HOH HOH A . P 5 HOH 39 339 89 HOH HOH A . P 5 HOH 40 340 244 HOH HOH A . P 5 HOH 41 341 77 HOH HOH A . P 5 HOH 42 342 25 HOH HOH A . P 5 HOH 43 343 245 HOH HOH A . P 5 HOH 44 344 212 HOH HOH A . P 5 HOH 45 345 87 HOH HOH A . # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.19.2_4158 1 ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.19.2_4158 2 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 3 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 4 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? . 5 # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 90.000 _cell.angle_beta_esd ? _cell.angle_gamma 90.000 _cell.angle_gamma_esd ? _cell.entry_id 9E6Y _cell.details ? _cell.formula_units_Z ? _cell.length_a 79.650 _cell.length_a_esd ? _cell.length_b 79.650 _cell.length_b_esd ? _cell.length_c 81.380 _cell.length_c_esd ? _cell.volume 516284.689 _cell.volume_esd ? _cell.Z_PDB 8 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 9E6Y _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall 'P 4nw 2abw' _symmetry.space_group_name_H-M 'P 43 21 2' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 9E6Y _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.28 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 45.98 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? _exptl_crystal.pdbx_mosaic_method ? _exptl_crystal.pdbx_mosaic_block_size ? _exptl_crystal.pdbx_mosaic_block_size_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 9.5 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '0.1M CHES PH 9.5, 20% W/V PEG 8000' _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.temp 298 # _diffrn.ambient_environment ? _diffrn.ambient_temp 298 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS EIGER X 16M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2022-10-12 _diffrn_detector.pdbx_frequency ? _diffrn_detector.id ? _diffrn_detector.number_of_axes ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'APS BEAMLINE 22-BM' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 1 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline 22-BM _diffrn_source.pdbx_synchrotron_site APS # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 9E6Y _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.2 _reflns.d_resolution_low 36.24 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 13826 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.94 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 19.57 _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 17.6 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.999 _reflns.pdbx_CC_star 1 _reflns.pdbx_R_split ? _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_CC_split_method ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_1 ? _reflns.pdbx_aniso_diffraction_limit_2 ? _reflns.pdbx_aniso_diffraction_limit_3 ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvalue_1 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_2 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_3 ? _reflns.pdbx_orthogonalization_convention ? _reflns.pdbx_percent_possible_ellipsoidal ? _reflns.pdbx_percent_possible_spherical ? _reflns.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns.pdbx_percent_possible_spherical_anomalous ? _reflns.pdbx_redundancy_anomalous ? _reflns.pdbx_CC_half_anomalous ? _reflns.pdbx_absDiff_over_sigma_anomalous ? _reflns.pdbx_percent_possible_anomalous ? _reflns.pdbx_observed_signal_threshold ? _reflns.pdbx_signal_type ? _reflns.pdbx_signal_details ? _reflns.pdbx_signal_software_id ? # _reflns_shell.d_res_high 2.2 _reflns_shell.d_res_low 2.279 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 1362 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half 0.645 _reflns_shell.pdbx_CC_star 0.886 _reflns_shell.pdbx_R_split ? _reflns_shell.percent_possible_all ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_percent_possible_ellipsoidal ? _reflns_shell.pdbx_percent_possible_spherical ? _reflns_shell.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns_shell.pdbx_percent_possible_spherical_anomalous ? _reflns_shell.pdbx_redundancy_anomalous ? _reflns_shell.pdbx_CC_half_anomalous ? _reflns_shell.pdbx_absDiff_over_sigma_anomalous ? _reflns_shell.pdbx_percent_possible_anomalous ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean 40.69 _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 9E6Y _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.20 _refine.ls_d_res_low 36.24 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 13826 _refine.ls_number_reflns_R_free 692 _refine.ls_number_reflns_R_work 13130 _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.93 _refine.ls_percent_reflns_R_free 5.01 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2096 _refine.ls_R_factor_R_free 0.2454 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.2078 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.79 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values 'GeoStd + Monomer Library + CDL v1.2' _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.1100 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.9000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 24.3510 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.2587 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.details ? _refine_hist.d_res_high 2.20 _refine_hist.d_res_low 36.24 _refine_hist.number_atoms_solvent 105 _refine_hist.number_atoms_total 1967 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total ? _refine_hist.pdbx_B_iso_mean_ligand ? _refine_hist.pdbx_B_iso_mean_solvent ? _refine_hist.pdbx_number_atoms_protein 1804 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 58 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.0021 ? 1908 ? f_bond_d ? ? 'X-RAY DIFFRACTION' ? 0.5606 ? 2582 ? f_angle_d ? ? 'X-RAY DIFFRACTION' ? 0.0441 ? 287 ? f_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.0042 ? 332 ? f_plane_restr ? ? 'X-RAY DIFFRACTION' ? 4.3594 ? 269 ? f_dihedral_angle_d ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_R_complete _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free _refine_ls_shell.R_factor_R_free 'X-RAY DIFFRACTION' 2.20 2.279 . . 135 2553 99.94 . . . . 0.2078 . . . . . . . . . . . 0.2454 'X-RAY DIFFRACTION' 2.37 2.61 . . 135 2575 100.00 . . . . 0.2531 . . . . . . . . . . . 0.3034 'X-RAY DIFFRACTION' 2.61 2.99 . . 137 2595 99.96 . . . . 0.2305 . . . . . . . . . . . 0.2579 'X-RAY DIFFRACTION' 2.99 3.76 . . 139 2635 100.00 . . . . 0.1956 . . . . . . . . . . . 0.2327 'X-RAY DIFFRACTION' 3.76 36.24 . . 146 2772 99.93 . . . . 0.1868 . . . . . . . . . . . 0.2207 # _struct.entry_id 9E6Y _struct.title 'Structure of CD112 (Nectin-2) domain 1 bound to CD112R (PVRIG)' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 9E6Y _struct_keywords.text 'Checkpoint receptor Immunoglobulin folding, IMMUNOSUPPRESSANT' _struct_keywords.pdbx_keywords IMMUNOSUPPRESSANT # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? E N N 3 ? F N N 3 ? G N N 3 ? H N N 3 ? I N N 4 ? J N N 3 ? K N N 3 ? L N N 3 ? M N N 3 ? N N N 3 ? O N N 5 ? P N N 5 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 UNP NECT2_HUMAN Q92692 ? 1 ;QDVRVQVLPEVRGQLGGTVELPCHLLPPVPGLYISLVTWQRPDAPANHQNVAAFHPKMGPSFPSPKPGSERLSFVSAKQS TGQDTEAELQDATLALHGLTVEDEGNYTCEFATFPKGSVRGMTWLRV ; 32 2 UNP PVRIG_HUMAN Q6DKI7 ? 2 ;TPEVWVQVRMEATELSSFTIRCGFLGSGSISLVTVSWGGPNGAGGTTLAVLHPERGIRQWAPARQARWETQSSISLILEG SGASSPCANTTFCCKFASFPEGSWEACGSLPPSSDPGLSAPPTPAPILRADL ; 41 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 9E6Y D 1 ? 127 ? Q92692 32 ? 158 ? 32 158 2 2 9E6Y A 1 ? 132 ? Q6DKI7 41 ? 172 ? 1 132 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 9E6Y LEU D 128 ? UNP Q92692 ? ? 'expression tag' 159 1 1 9E6Y VAL D 129 ? UNP Q92692 ? ? 'expression tag' 160 2 1 9E6Y PRO D 130 ? UNP Q92692 ? ? 'expression tag' 161 3 1 9E6Y ARG D 131 ? UNP Q92692 ? ? 'expression tag' 162 4 1 9E6Y LEU D 132 ? UNP Q92692 ? ? 'expression tag' 163 5 2 9E6Y ARG A 133 ? UNP Q6DKI7 ? ? 'expression tag' 133 6 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 3010 ? 1 MORE 9 ? 1 'SSA (A^2)' 12950 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'gel filtration' _pdbx_struct_assembly_auth_evidence.details ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 PRO A 45 ? HIS A 48 ? PRO D 76 HIS D 79 5 ? 4 HELX_P HELX_P2 AA2 THR A 100 ? GLU A 104 ? THR D 131 GLU D 135 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 23 SG ? ? ? 1_555 A CYS 109 SG ? ? D CYS 54 D CYS 140 1_555 ? ? ? ? ? ? ? 2.031 ? ? disulf2 disulf ? ? B CYS 22 SG ? ? ? 1_555 B CYS 94 SG ? ? A CYS 22 A CYS 94 1_555 ? ? ? ? ? ? ? 2.032 ? ? disulf3 disulf ? ? B CYS 93 SG ? ? ? 1_555 B CYS 107 SG ? ? A CYS 93 A CYS 107 1_555 ? ? ? ? ? ? ? 2.032 ? ? covale1 covale one ? B ASN 89 ND2 ? ? ? 1_555 I NAG . C1 ? ? A ASN 89 A NAG 201 1_555 ? ? ? ? ? ? ? 1.441 ? N-Glycosylation # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? # loop_ _pdbx_modification_feature.ordinal _pdbx_modification_feature.label_comp_id _pdbx_modification_feature.label_asym_id _pdbx_modification_feature.label_seq_id _pdbx_modification_feature.label_alt_id _pdbx_modification_feature.modified_residue_label_comp_id _pdbx_modification_feature.modified_residue_label_asym_id _pdbx_modification_feature.modified_residue_label_seq_id _pdbx_modification_feature.modified_residue_label_alt_id _pdbx_modification_feature.auth_comp_id _pdbx_modification_feature.auth_asym_id _pdbx_modification_feature.auth_seq_id _pdbx_modification_feature.PDB_ins_code _pdbx_modification_feature.symmetry _pdbx_modification_feature.modified_residue_auth_comp_id _pdbx_modification_feature.modified_residue_auth_asym_id _pdbx_modification_feature.modified_residue_auth_seq_id _pdbx_modification_feature.modified_residue_PDB_ins_code _pdbx_modification_feature.modified_residue_symmetry _pdbx_modification_feature.comp_id_linking_atom _pdbx_modification_feature.modified_residue_id_linking_atom _pdbx_modification_feature.modified_residue_id _pdbx_modification_feature.ref_pcm_id _pdbx_modification_feature.ref_comp_id _pdbx_modification_feature.type _pdbx_modification_feature.category 1 NAG I . ? ASN B 89 ? NAG A 201 ? 1_555 ASN A 89 ? 1_555 C1 ND2 ASN 1 NAG N-Glycosylation Carbohydrate 2 CYS A 23 ? CYS A 109 ? CYS D 54 ? 1_555 CYS D 140 ? 1_555 SG SG . . . None 'Disulfide bridge' 3 CYS B 22 ? CYS B 94 ? CYS A 22 ? 1_555 CYS A 94 ? 1_555 SG SG . . . None 'Disulfide bridge' 4 CYS B 93 ? CYS B 107 ? CYS A 93 ? 1_555 CYS A 107 ? 1_555 SG SG . . . None 'Disulfide bridge' # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 LEU 26 A . ? LEU 57 D PRO 27 A ? PRO 58 D 1 -2.92 2 LYS 66 A . ? LYS 97 D PRO 67 A ? PRO 98 D 1 1.12 3 PHE 114 A . ? PHE 145 D PRO 115 A ? PRO 146 D 1 4.76 4 ALA 61 B . ? ALA 61 A PRO 62 B ? PRO 62 A 1 -1.93 5 PHE 99 B . ? PHE 99 A PRO 100 B ? PRO 100 A 1 4.68 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 2 ? AA2 ? 6 ? AA3 ? 3 ? AA4 ? 4 ? AA5 ? 5 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA2 1 2 ? parallel AA2 2 3 ? anti-parallel AA2 3 4 ? anti-parallel AA2 4 5 ? anti-parallel AA2 5 6 ? anti-parallel AA3 1 2 ? anti-parallel AA3 2 3 ? anti-parallel AA4 1 2 ? anti-parallel AA4 2 3 ? anti-parallel AA4 3 4 ? anti-parallel AA5 1 2 ? anti-parallel AA5 2 3 ? anti-parallel AA5 3 4 ? anti-parallel AA5 4 5 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 ARG A 4 ? VAL A 7 ? ARG D 35 VAL D 38 AA1 2 CYS A 23 ? LEU A 26 ? CYS D 54 LEU D 57 AA2 1 GLU A 10 ? GLN A 14 ? GLU D 41 GLN D 45 AA2 2 GLY A 117 ? LEU A 128 ? GLY D 148 LEU D 159 AA2 3 GLY A 105 ? PHE A 114 ? GLY D 136 PHE D 145 AA2 4 TYR A 33 ? GLN A 40 ? TYR D 64 GLN D 71 AA2 5 ASN A 50 ? HIS A 55 ? ASN D 81 HIS D 86 AA2 6 GLY A 59 ? SER A 61 ? GLY D 90 SER D 92 AA3 1 VAL A 19 ? LEU A 21 ? VAL D 50 LEU D 52 AA3 2 LEU A 94 ? LEU A 96 ? LEU D 125 LEU D 127 AA3 3 LEU A 72 ? PHE A 74 ? LEU D 103 PHE D 105 AA4 1 GLU B 3 ? ARG B 9 ? GLU A 3 ARG A 9 AA4 2 THR B 19 ? LEU B 25 ? THR A 19 LEU A 25 AA4 3 SER B 73 ? LEU B 78 ? SER A 73 LEU A 78 AA4 4 ALA B 63 ? GLU B 69 ? ALA A 63 GLU A 69 AA5 1 GLY B 56 ? GLN B 59 ? GLY A 56 GLN A 59 AA5 2 THR B 46 ? HIS B 52 ? THR A 46 HIS A 52 AA5 3 ILE B 30 ? TRP B 37 ? ILE A 30 TRP A 37 AA5 4 THR B 91 ? SER B 98 ? THR A 91 SER A 98 AA5 5 GLY B 102 ? SER B 109 ? GLY A 102 SER A 109 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N GLN A 6 ? N GLN D 37 O HIS A 24 ? O HIS D 55 AA2 1 2 N VAL A 11 ? N VAL D 42 O ARG A 126 ? O ARG D 157 AA2 2 3 O LEU A 125 ? O LEU D 156 N GLY A 105 ? N GLY D 136 AA2 3 4 O PHE A 114 ? O PHE D 145 N TYR A 33 ? N TYR D 64 AA2 4 5 N TRP A 39 ? N TRP D 70 O ALA A 52 ? O ALA D 83 AA2 5 6 N HIS A 55 ? N HIS D 86 O GLY A 59 ? O GLY D 90 AA3 1 2 N LEU A 21 ? N LEU D 52 O LEU A 94 ? O LEU D 125 AA3 2 3 O ALA A 95 ? O ALA D 126 N SER A 73 ? N SER D 104 AA4 1 2 N GLN B 7 ? N GLN A 7 O ARG B 21 ? O ARG A 21 AA4 2 3 N ILE B 20 ? N ILE A 20 O LEU B 76 ? O LEU A 76 AA4 3 4 O SER B 73 ? O SER A 73 N GLU B 69 ? N GLU A 69 AA5 1 2 O ARG B 58 ? O ARG A 58 N VAL B 50 ? N VAL A 50 AA5 2 3 O LEU B 48 ? O LEU A 48 N VAL B 35 ? N VAL A 35 AA5 3 4 N SER B 31 ? N SER A 31 O ALA B 97 ? O ALA A 97 AA5 4 5 N PHE B 96 ? N PHE A 96 O TRP B 104 ? O TRP A 104 # _pdbx_entry_details.entry_id 9E6Y _pdbx_entry_details.has_ligand_of_interest Y _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_protein_modification Y # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 SER A 16 ? ? -142.12 47.87 2 1 SER A 17 ? ? -160.46 108.66 3 1 ALA A 43 ? ? -150.39 39.52 4 1 PRO A 62 ? ? -102.92 56.80 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 D GLN 32 ? A GLN 1 2 1 Y 1 D ASP 33 ? A ASP 2 3 1 Y 1 A SER 81 ? B SER 81 4 1 Y 1 A GLY 82 ? B GLY 82 5 1 Y 1 A ALA 83 ? B ALA 83 6 1 Y 1 A SER 84 ? B SER 84 7 1 Y 1 A SER 85 ? B SER 85 8 1 Y 1 A SER 114 ? B SER 114 9 1 Y 1 A ASP 115 ? B ASP 115 10 1 Y 1 A PRO 116 ? B PRO 116 11 1 Y 1 A GLY 117 ? B GLY 117 12 1 Y 1 A LEU 118 ? B LEU 118 13 1 Y 1 A SER 119 ? B SER 119 14 1 Y 1 A ALA 120 ? B ALA 120 15 1 Y 1 A PRO 121 ? B PRO 121 16 1 Y 1 A PRO 122 ? B PRO 122 17 1 Y 1 A THR 123 ? B THR 123 18 1 Y 1 A PRO 124 ? B PRO 124 19 1 Y 1 A ALA 125 ? B ALA 125 20 1 Y 1 A PRO 126 ? B PRO 126 21 1 Y 1 A ILE 127 ? B ILE 127 22 1 Y 1 A LEU 128 ? B LEU 128 23 1 Y 1 A ARG 129 ? B ARG 129 24 1 Y 1 A ALA 130 ? B ALA 130 25 1 Y 1 A ASP 131 ? B ASP 131 26 1 Y 1 A LEU 132 ? B LEU 132 27 1 Y 1 A ARG 133 ? B ARG 133 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 EDO C1 C N N 88 EDO O1 O N N 89 EDO C2 C N N 90 EDO O2 O N N 91 EDO H11 H N N 92 EDO H12 H N N 93 EDO HO1 H N N 94 EDO H21 H N N 95 EDO H22 H N N 96 EDO HO2 H N N 97 GLN N N N N 98 GLN CA C N S 99 GLN C C N N 100 GLN O O N N 101 GLN CB C N N 102 GLN CG C N N 103 GLN CD C N N 104 GLN OE1 O N N 105 GLN NE2 N N N 106 GLN OXT O N N 107 GLN H H N N 108 GLN H2 H N N 109 GLN HA H N N 110 GLN HB2 H N N 111 GLN HB3 H N N 112 GLN HG2 H N N 113 GLN HG3 H N N 114 GLN HE21 H N N 115 GLN HE22 H N N 116 GLN HXT H N N 117 GLU N N N N 118 GLU CA C N S 119 GLU C C N N 120 GLU O O N N 121 GLU CB C N N 122 GLU CG C N N 123 GLU CD C N N 124 GLU OE1 O N N 125 GLU OE2 O N N 126 GLU OXT O N N 127 GLU H H N N 128 GLU H2 H N N 129 GLU HA H N N 130 GLU HB2 H N N 131 GLU HB3 H N N 132 GLU HG2 H N N 133 GLU HG3 H N N 134 GLU HE2 H N N 135 GLU HXT H N N 136 GLY N N N N 137 GLY CA C N N 138 GLY C C N N 139 GLY O O N N 140 GLY OXT O N N 141 GLY H H N N 142 GLY H2 H N N 143 GLY HA2 H N N 144 GLY HA3 H N N 145 GLY HXT H N N 146 HIS N N N N 147 HIS CA C N S 148 HIS C C N N 149 HIS O O N N 150 HIS CB C N N 151 HIS CG C Y N 152 HIS ND1 N Y N 153 HIS CD2 C Y N 154 HIS CE1 C Y N 155 HIS NE2 N Y N 156 HIS OXT O N N 157 HIS H H N N 158 HIS H2 H N N 159 HIS HA H N N 160 HIS HB2 H N N 161 HIS HB3 H N N 162 HIS HD1 H N N 163 HIS HD2 H N N 164 HIS HE1 H N N 165 HIS HE2 H N N 166 HIS HXT H N N 167 HOH O O N N 168 HOH H1 H N N 169 HOH H2 H N N 170 ILE N N N N 171 ILE CA C N S 172 ILE C C N N 173 ILE O O N N 174 ILE CB C N S 175 ILE CG1 C N N 176 ILE CG2 C N N 177 ILE CD1 C N N 178 ILE OXT O N N 179 ILE H H N N 180 ILE H2 H N N 181 ILE HA H N N 182 ILE HB H N N 183 ILE HG12 H N N 184 ILE HG13 H N N 185 ILE HG21 H N N 186 ILE HG22 H N N 187 ILE HG23 H N N 188 ILE HD11 H N N 189 ILE HD12 H N N 190 ILE HD13 H N N 191 ILE HXT H N N 192 LEU N N N N 193 LEU CA C N S 194 LEU C C N N 195 LEU O O N N 196 LEU CB C N N 197 LEU CG C N N 198 LEU CD1 C N N 199 LEU CD2 C N N 200 LEU OXT O N N 201 LEU H H N N 202 LEU H2 H N N 203 LEU HA H N N 204 LEU HB2 H N N 205 LEU HB3 H N N 206 LEU HG H N N 207 LEU HD11 H N N 208 LEU HD12 H N N 209 LEU HD13 H N N 210 LEU HD21 H N N 211 LEU HD22 H N N 212 LEU HD23 H N N 213 LEU HXT H N N 214 LYS N N N N 215 LYS CA C N S 216 LYS C C N N 217 LYS O O N N 218 LYS CB C N N 219 LYS CG C N N 220 LYS CD C N N 221 LYS CE C N N 222 LYS NZ N N N 223 LYS OXT O N N 224 LYS H H N N 225 LYS H2 H N N 226 LYS HA H N N 227 LYS HB2 H N N 228 LYS HB3 H N N 229 LYS HG2 H N N 230 LYS HG3 H N N 231 LYS HD2 H N N 232 LYS HD3 H N N 233 LYS HE2 H N N 234 LYS HE3 H N N 235 LYS HZ1 H N N 236 LYS HZ2 H N N 237 LYS HZ3 H N N 238 LYS HXT H N N 239 MET N N N N 240 MET CA C N S 241 MET C C N N 242 MET O O N N 243 MET CB C N N 244 MET CG C N N 245 MET SD S N N 246 MET CE C N N 247 MET OXT O N N 248 MET H H N N 249 MET H2 H N N 250 MET HA H N N 251 MET HB2 H N N 252 MET HB3 H N N 253 MET HG2 H N N 254 MET HG3 H N N 255 MET HE1 H N N 256 MET HE2 H N N 257 MET HE3 H N N 258 MET HXT H N N 259 NAG C1 C N R 260 NAG C2 C N R 261 NAG C3 C N R 262 NAG C4 C N S 263 NAG C5 C N R 264 NAG C6 C N N 265 NAG C7 C N N 266 NAG C8 C N N 267 NAG N2 N N N 268 NAG O1 O N N 269 NAG O3 O N N 270 NAG O4 O N N 271 NAG O5 O N N 272 NAG O6 O N N 273 NAG O7 O N N 274 NAG H1 H N N 275 NAG H2 H N N 276 NAG H3 H N N 277 NAG H4 H N N 278 NAG H5 H N N 279 NAG H61 H N N 280 NAG H62 H N N 281 NAG H81 H N N 282 NAG H82 H N N 283 NAG H83 H N N 284 NAG HN2 H N N 285 NAG HO1 H N N 286 NAG HO3 H N N 287 NAG HO4 H N N 288 NAG HO6 H N N 289 PHE N N N N 290 PHE CA C N S 291 PHE C C N N 292 PHE O O N N 293 PHE CB C N N 294 PHE CG C Y N 295 PHE CD1 C Y N 296 PHE CD2 C Y N 297 PHE CE1 C Y N 298 PHE CE2 C Y N 299 PHE CZ C Y N 300 PHE OXT O N N 301 PHE H H N N 302 PHE H2 H N N 303 PHE HA H N N 304 PHE HB2 H N N 305 PHE HB3 H N N 306 PHE HD1 H N N 307 PHE HD2 H N N 308 PHE HE1 H N N 309 PHE HE2 H N N 310 PHE HZ H N N 311 PHE HXT H N N 312 PRO N N N N 313 PRO CA C N S 314 PRO C C N N 315 PRO O O N N 316 PRO CB C N N 317 PRO CG C N N 318 PRO CD C N N 319 PRO OXT O N N 320 PRO H H N N 321 PRO HA H N N 322 PRO HB2 H N N 323 PRO HB3 H N N 324 PRO HG2 H N N 325 PRO HG3 H N N 326 PRO HD2 H N N 327 PRO HD3 H N N 328 PRO HXT H N N 329 SER N N N N 330 SER CA C N S 331 SER C C N N 332 SER O O N N 333 SER CB C N N 334 SER OG O N N 335 SER OXT O N N 336 SER H H N N 337 SER H2 H N N 338 SER HA H N N 339 SER HB2 H N N 340 SER HB3 H N N 341 SER HG H N N 342 SER HXT H N N 343 THR N N N N 344 THR CA C N S 345 THR C C N N 346 THR O O N N 347 THR CB C N R 348 THR OG1 O N N 349 THR CG2 C N N 350 THR OXT O N N 351 THR H H N N 352 THR H2 H N N 353 THR HA H N N 354 THR HB H N N 355 THR HG1 H N N 356 THR HG21 H N N 357 THR HG22 H N N 358 THR HG23 H N N 359 THR HXT H N N 360 TRP N N N N 361 TRP CA C N S 362 TRP C C N N 363 TRP O O N N 364 TRP CB C N N 365 TRP CG C Y N 366 TRP CD1 C Y N 367 TRP CD2 C Y N 368 TRP NE1 N Y N 369 TRP CE2 C Y N 370 TRP CE3 C Y N 371 TRP CZ2 C Y N 372 TRP CZ3 C Y N 373 TRP CH2 C Y N 374 TRP OXT O N N 375 TRP H H N N 376 TRP H2 H N N 377 TRP HA H N N 378 TRP HB2 H N N 379 TRP HB3 H N N 380 TRP HD1 H N N 381 TRP HE1 H N N 382 TRP HE3 H N N 383 TRP HZ2 H N N 384 TRP HZ3 H N N 385 TRP HH2 H N N 386 TRP HXT H N N 387 TYR N N N N 388 TYR CA C N S 389 TYR C C N N 390 TYR O O N N 391 TYR CB C N N 392 TYR CG C Y N 393 TYR CD1 C Y N 394 TYR CD2 C Y N 395 TYR CE1 C Y N 396 TYR CE2 C Y N 397 TYR CZ C Y N 398 TYR OH O N N 399 TYR OXT O N N 400 TYR H H N N 401 TYR H2 H N N 402 TYR HA H N N 403 TYR HB2 H N N 404 TYR HB3 H N N 405 TYR HD1 H N N 406 TYR HD2 H N N 407 TYR HE1 H N N 408 TYR HE2 H N N 409 TYR HH H N N 410 TYR HXT H N N 411 VAL N N N N 412 VAL CA C N S 413 VAL C C N N 414 VAL O O N N 415 VAL CB C N N 416 VAL CG1 C N N 417 VAL CG2 C N N 418 VAL OXT O N N 419 VAL H H N N 420 VAL H2 H N N 421 VAL HA H N N 422 VAL HB H N N 423 VAL HG11 H N N 424 VAL HG12 H N N 425 VAL HG13 H N N 426 VAL HG21 H N N 427 VAL HG22 H N N 428 VAL HG23 H N N 429 VAL HXT H N N 430 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 EDO C1 O1 sing N N 83 EDO C1 C2 sing N N 84 EDO C1 H11 sing N N 85 EDO C1 H12 sing N N 86 EDO O1 HO1 sing N N 87 EDO C2 O2 sing N N 88 EDO C2 H21 sing N N 89 EDO C2 H22 sing N N 90 EDO O2 HO2 sing N N 91 GLN N CA sing N N 92 GLN N H sing N N 93 GLN N H2 sing N N 94 GLN CA C sing N N 95 GLN CA CB sing N N 96 GLN CA HA sing N N 97 GLN C O doub N N 98 GLN C OXT sing N N 99 GLN CB CG sing N N 100 GLN CB HB2 sing N N 101 GLN CB HB3 sing N N 102 GLN CG CD sing N N 103 GLN CG HG2 sing N N 104 GLN CG HG3 sing N N 105 GLN CD OE1 doub N N 106 GLN CD NE2 sing N N 107 GLN NE2 HE21 sing N N 108 GLN NE2 HE22 sing N N 109 GLN OXT HXT sing N N 110 GLU N CA sing N N 111 GLU N H sing N N 112 GLU N H2 sing N N 113 GLU CA C sing N N 114 GLU CA CB sing N N 115 GLU CA HA sing N N 116 GLU C O doub N N 117 GLU C OXT sing N N 118 GLU CB CG sing N N 119 GLU CB HB2 sing N N 120 GLU CB HB3 sing N N 121 GLU CG CD sing N N 122 GLU CG HG2 sing N N 123 GLU CG HG3 sing N N 124 GLU CD OE1 doub N N 125 GLU CD OE2 sing N N 126 GLU OE2 HE2 sing N N 127 GLU OXT HXT sing N N 128 GLY N CA sing N N 129 GLY N H sing N N 130 GLY N H2 sing N N 131 GLY CA C sing N N 132 GLY CA HA2 sing N N 133 GLY CA HA3 sing N N 134 GLY C O doub N N 135 GLY C OXT sing N N 136 GLY OXT HXT sing N N 137 HIS N CA sing N N 138 HIS N H sing N N 139 HIS N H2 sing N N 140 HIS CA C sing N N 141 HIS CA CB sing N N 142 HIS CA HA sing N N 143 HIS C O doub N N 144 HIS C OXT sing N N 145 HIS CB CG sing N N 146 HIS CB HB2 sing N N 147 HIS CB HB3 sing N N 148 HIS CG ND1 sing Y N 149 HIS CG CD2 doub Y N 150 HIS ND1 CE1 doub Y N 151 HIS ND1 HD1 sing N N 152 HIS CD2 NE2 sing Y N 153 HIS CD2 HD2 sing N N 154 HIS CE1 NE2 sing Y N 155 HIS CE1 HE1 sing N N 156 HIS NE2 HE2 sing N N 157 HIS OXT HXT sing N N 158 HOH O H1 sing N N 159 HOH O H2 sing N N 160 ILE N CA sing N N 161 ILE N H sing N N 162 ILE N H2 sing N N 163 ILE CA C sing N N 164 ILE CA CB sing N N 165 ILE CA HA sing N N 166 ILE C O doub N N 167 ILE C OXT sing N N 168 ILE CB CG1 sing N N 169 ILE CB CG2 sing N N 170 ILE CB HB sing N N 171 ILE CG1 CD1 sing N N 172 ILE CG1 HG12 sing N N 173 ILE CG1 HG13 sing N N 174 ILE CG2 HG21 sing N N 175 ILE CG2 HG22 sing N N 176 ILE CG2 HG23 sing N N 177 ILE CD1 HD11 sing N N 178 ILE CD1 HD12 sing N N 179 ILE CD1 HD13 sing N N 180 ILE OXT HXT sing N N 181 LEU N CA sing N N 182 LEU N H sing N N 183 LEU N H2 sing N N 184 LEU CA C sing N N 185 LEU CA CB sing N N 186 LEU CA HA sing N N 187 LEU C O doub N N 188 LEU C OXT sing N N 189 LEU CB CG sing N N 190 LEU CB HB2 sing N N 191 LEU CB HB3 sing N N 192 LEU CG CD1 sing N N 193 LEU CG CD2 sing N N 194 LEU CG HG sing N N 195 LEU CD1 HD11 sing N N 196 LEU CD1 HD12 sing N N 197 LEU CD1 HD13 sing N N 198 LEU CD2 HD21 sing N N 199 LEU CD2 HD22 sing N N 200 LEU CD2 HD23 sing N N 201 LEU OXT HXT sing N N 202 LYS N CA sing N N 203 LYS N H sing N N 204 LYS N H2 sing N N 205 LYS CA C sing N N 206 LYS CA CB sing N N 207 LYS CA HA sing N N 208 LYS C O doub N N 209 LYS C OXT sing N N 210 LYS CB CG sing N N 211 LYS CB HB2 sing N N 212 LYS CB HB3 sing N N 213 LYS CG CD sing N N 214 LYS CG HG2 sing N N 215 LYS CG HG3 sing N N 216 LYS CD CE sing N N 217 LYS CD HD2 sing N N 218 LYS CD HD3 sing N N 219 LYS CE NZ sing N N 220 LYS CE HE2 sing N N 221 LYS CE HE3 sing N N 222 LYS NZ HZ1 sing N N 223 LYS NZ HZ2 sing N N 224 LYS NZ HZ3 sing N N 225 LYS OXT HXT sing N N 226 MET N CA sing N N 227 MET N H sing N N 228 MET N H2 sing N N 229 MET CA C sing N N 230 MET CA CB sing N N 231 MET CA HA sing N N 232 MET C O doub N N 233 MET C OXT sing N N 234 MET CB CG sing N N 235 MET CB HB2 sing N N 236 MET CB HB3 sing N N 237 MET CG SD sing N N 238 MET CG HG2 sing N N 239 MET CG HG3 sing N N 240 MET SD CE sing N N 241 MET CE HE1 sing N N 242 MET CE HE2 sing N N 243 MET CE HE3 sing N N 244 MET OXT HXT sing N N 245 NAG C1 C2 sing N N 246 NAG C1 O1 sing N N 247 NAG C1 O5 sing N N 248 NAG C1 H1 sing N N 249 NAG C2 C3 sing N N 250 NAG C2 N2 sing N N 251 NAG C2 H2 sing N N 252 NAG C3 C4 sing N N 253 NAG C3 O3 sing N N 254 NAG C3 H3 sing N N 255 NAG C4 C5 sing N N 256 NAG C4 O4 sing N N 257 NAG C4 H4 sing N N 258 NAG C5 C6 sing N N 259 NAG C5 O5 sing N N 260 NAG C5 H5 sing N N 261 NAG C6 O6 sing N N 262 NAG C6 H61 sing N N 263 NAG C6 H62 sing N N 264 NAG C7 C8 sing N N 265 NAG C7 N2 sing N N 266 NAG C7 O7 doub N N 267 NAG C8 H81 sing N N 268 NAG C8 H82 sing N N 269 NAG C8 H83 sing N N 270 NAG N2 HN2 sing N N 271 NAG O1 HO1 sing N N 272 NAG O3 HO3 sing N N 273 NAG O4 HO4 sing N N 274 NAG O6 HO6 sing N N 275 PHE N CA sing N N 276 PHE N H sing N N 277 PHE N H2 sing N N 278 PHE CA C sing N N 279 PHE CA CB sing N N 280 PHE CA HA sing N N 281 PHE C O doub N N 282 PHE C OXT sing N N 283 PHE CB CG sing N N 284 PHE CB HB2 sing N N 285 PHE CB HB3 sing N N 286 PHE CG CD1 doub Y N 287 PHE CG CD2 sing Y N 288 PHE CD1 CE1 sing Y N 289 PHE CD1 HD1 sing N N 290 PHE CD2 CE2 doub Y N 291 PHE CD2 HD2 sing N N 292 PHE CE1 CZ doub Y N 293 PHE CE1 HE1 sing N N 294 PHE CE2 CZ sing Y N 295 PHE CE2 HE2 sing N N 296 PHE CZ HZ sing N N 297 PHE OXT HXT sing N N 298 PRO N CA sing N N 299 PRO N CD sing N N 300 PRO N H sing N N 301 PRO CA C sing N N 302 PRO CA CB sing N N 303 PRO CA HA sing N N 304 PRO C O doub N N 305 PRO C OXT sing N N 306 PRO CB CG sing N N 307 PRO CB HB2 sing N N 308 PRO CB HB3 sing N N 309 PRO CG CD sing N N 310 PRO CG HG2 sing N N 311 PRO CG HG3 sing N N 312 PRO CD HD2 sing N N 313 PRO CD HD3 sing N N 314 PRO OXT HXT sing N N 315 SER N CA sing N N 316 SER N H sing N N 317 SER N H2 sing N N 318 SER CA C sing N N 319 SER CA CB sing N N 320 SER CA HA sing N N 321 SER C O doub N N 322 SER C OXT sing N N 323 SER CB OG sing N N 324 SER CB HB2 sing N N 325 SER CB HB3 sing N N 326 SER OG HG sing N N 327 SER OXT HXT sing N N 328 THR N CA sing N N 329 THR N H sing N N 330 THR N H2 sing N N 331 THR CA C sing N N 332 THR CA CB sing N N 333 THR CA HA sing N N 334 THR C O doub N N 335 THR C OXT sing N N 336 THR CB OG1 sing N N 337 THR CB CG2 sing N N 338 THR CB HB sing N N 339 THR OG1 HG1 sing N N 340 THR CG2 HG21 sing N N 341 THR CG2 HG22 sing N N 342 THR CG2 HG23 sing N N 343 THR OXT HXT sing N N 344 TRP N CA sing N N 345 TRP N H sing N N 346 TRP N H2 sing N N 347 TRP CA C sing N N 348 TRP CA CB sing N N 349 TRP CA HA sing N N 350 TRP C O doub N N 351 TRP C OXT sing N N 352 TRP CB CG sing N N 353 TRP CB HB2 sing N N 354 TRP CB HB3 sing N N 355 TRP CG CD1 doub Y N 356 TRP CG CD2 sing Y N 357 TRP CD1 NE1 sing Y N 358 TRP CD1 HD1 sing N N 359 TRP CD2 CE2 doub Y N 360 TRP CD2 CE3 sing Y N 361 TRP NE1 CE2 sing Y N 362 TRP NE1 HE1 sing N N 363 TRP CE2 CZ2 sing Y N 364 TRP CE3 CZ3 doub Y N 365 TRP CE3 HE3 sing N N 366 TRP CZ2 CH2 doub Y N 367 TRP CZ2 HZ2 sing N N 368 TRP CZ3 CH2 sing Y N 369 TRP CZ3 HZ3 sing N N 370 TRP CH2 HH2 sing N N 371 TRP OXT HXT sing N N 372 TYR N CA sing N N 373 TYR N H sing N N 374 TYR N H2 sing N N 375 TYR CA C sing N N 376 TYR CA CB sing N N 377 TYR CA HA sing N N 378 TYR C O doub N N 379 TYR C OXT sing N N 380 TYR CB CG sing N N 381 TYR CB HB2 sing N N 382 TYR CB HB3 sing N N 383 TYR CG CD1 doub Y N 384 TYR CG CD2 sing Y N 385 TYR CD1 CE1 sing Y N 386 TYR CD1 HD1 sing N N 387 TYR CD2 CE2 doub Y N 388 TYR CD2 HD2 sing N N 389 TYR CE1 CZ doub Y N 390 TYR CE1 HE1 sing N N 391 TYR CE2 CZ sing Y N 392 TYR CE2 HE2 sing N N 393 TYR CZ OH sing N N 394 TYR OH HH sing N N 395 TYR OXT HXT sing N N 396 VAL N CA sing N N 397 VAL N H sing N N 398 VAL N H2 sing N N 399 VAL CA C sing N N 400 VAL CA CB sing N N 401 VAL CA HA sing N N 402 VAL C O doub N N 403 VAL C OXT sing N N 404 VAL CB CG1 sing N N 405 VAL CB CG2 sing N N 406 VAL CB HB sing N N 407 VAL CG1 HG11 sing N N 408 VAL CG1 HG12 sing N N 409 VAL CG1 HG13 sing N N 410 VAL CG2 HG21 sing N N 411 VAL CG2 HG22 sing N N 412 VAL CG2 HG23 sing N N 413 VAL OXT HXT sing N N 414 # _pdbx_audit_support.funding_organization 'National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)' _pdbx_audit_support.country 'United States' _pdbx_audit_support.grant_number GM133482-01 _pdbx_audit_support.ordinal 1 # loop_ _pdbx_initial_refinement_model.id _pdbx_initial_refinement_model.entity_id_list _pdbx_initial_refinement_model.type _pdbx_initial_refinement_model.source_name _pdbx_initial_refinement_model.accession_code _pdbx_initial_refinement_model.details 1 ? 'experimental model' PDB 4DHF CD112 2 ? 'in silico model' AlphaFold ? ? # _atom_sites.entry_id 9E6Y _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.Cartn_transform_axes ? _atom_sites.fract_transf_matrix[1][1] 0.012555 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.012555 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.012288 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C N O S # loop_ #