data_9E73 # _entry.id 9E73 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.407 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 9E73 pdb_00009e73 10.2210/pdb9e73/pdb WWPDB D_1000289662 ? ? EMDB EMD-47655 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date _pdbx_audit_revision_history.part_number 1 'Structure model' 1 0 2025-11-05 ? 2 'EM metadata' 1 0 2025-11-05 ? 3 FSC 1 0 2025-11-05 ? 4 'Half map' 1 0 2025-11-05 1 5 'Half map' 1 0 2025-11-05 2 6 Image 1 0 2025-11-05 ? 7 Mask 1 0 2025-11-05 1 8 'Primary map' 1 0 2025-11-05 ? 9 'Structure model' 2 0 2025-12-03 ? 10 'EM metadata' 1 1 2025-12-03 ? # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 2 'EM metadata' repository 'Initial release' ? ? 3 3 FSC repository 'Initial release' ? ? 4 4 'Half map' repository 'Initial release' ? ? 5 5 'Half map' repository 'Initial release' ? ? 6 6 Image repository 'Initial release' ? ? 7 7 Mask repository 'Initial release' ? ? 8 8 'Primary map' repository 'Initial release' ? ? 9 9 'Structure model' author 'Coordinate replacement' 'Atomic clashes' ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 9 'Structure model' 'Atomic model' 2 9 'Structure model' 'Data collection' 3 9 'Structure model' 'Derived calculations' 4 9 'Structure model' 'Refinement description' 5 9 'Structure model' 'Structure summary' 6 10 'EM metadata' 'Data processing' 7 10 'EM metadata' 'Experimental summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 9 'Structure model' atom_site 2 9 'Structure model' em_admin 3 9 'Structure model' em_software 4 9 'Structure model' ndb_struct_na_base_pair 5 9 'Structure model' ndb_struct_na_base_pair_step 6 9 'Structure model' pdbx_contact_author 7 9 'Structure model' pdbx_struct_assembly 8 9 'Structure model' refine_ls_restr 9 9 'Structure model' struct_conn 10 10 'EM metadata' em_admin 11 10 'EM metadata' em_software # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 9 'Structure model' '_atom_site.B_iso_or_equiv' 2 9 'Structure model' '_atom_site.Cartn_x' 3 9 'Structure model' '_atom_site.Cartn_y' 4 9 'Structure model' '_atom_site.Cartn_z' 5 9 'Structure model' '_em_admin.last_update' 6 9 'Structure model' '_ndb_struct_na_base_pair.buckle' 7 9 'Structure model' '_ndb_struct_na_base_pair.hbond_type_12' 8 9 'Structure model' '_ndb_struct_na_base_pair.hbond_type_28' 9 9 'Structure model' '_ndb_struct_na_base_pair.opening' 10 9 'Structure model' '_ndb_struct_na_base_pair.propeller' 11 9 'Structure model' '_ndb_struct_na_base_pair.shear' 12 9 'Structure model' '_ndb_struct_na_base_pair.stagger' 13 9 'Structure model' '_ndb_struct_na_base_pair.stretch' 14 9 'Structure model' '_ndb_struct_na_base_pair_step.helical_rise' 15 9 'Structure model' '_ndb_struct_na_base_pair_step.helical_twist' 16 9 'Structure model' '_ndb_struct_na_base_pair_step.inclination' 17 9 'Structure model' '_ndb_struct_na_base_pair_step.rise' 18 9 'Structure model' '_ndb_struct_na_base_pair_step.roll' 19 9 'Structure model' '_ndb_struct_na_base_pair_step.shift' 20 9 'Structure model' '_ndb_struct_na_base_pair_step.slide' 21 9 'Structure model' '_ndb_struct_na_base_pair_step.tilt' 22 9 'Structure model' '_ndb_struct_na_base_pair_step.tip' 23 9 'Structure model' '_ndb_struct_na_base_pair_step.twist' 24 9 'Structure model' '_ndb_struct_na_base_pair_step.x_displacement' 25 9 'Structure model' '_ndb_struct_na_base_pair_step.y_displacement' 26 9 'Structure model' '_pdbx_struct_assembly.details' 27 9 'Structure model' '_refine_ls_restr.dev_ideal' 28 9 'Structure model' '_refine_ls_restr.number' 29 10 'EM metadata' '_em_admin.last_update' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 9E73 _pdbx_database_status.recvd_initial_deposition_date 2024-10-31 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # _pdbx_database_related.db_name EMDB _pdbx_database_related.details 'Cryo-EM structure of a bacterial non-coding RNA' _pdbx_database_related.db_id EMD-47655 _pdbx_database_related.content_type 'associated EM volume' # _pdbx_contact_author.id 2 _pdbx_contact_author.email feigon@mbi.ucla.edu _pdbx_contact_author.name_first Juli _pdbx_contact_author.name_last Feigon _pdbx_contact_author.name_mi ? _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0003-3376-435X # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'He, Y.' 1 0000-0002-1368-6422 'Zhong, J.' 2 ? 'Yang, Y.' 3 ? 'Gunsalus, R.P.' 4 ? 'Zhou, Z.H.' 5 ? 'Feigon, J.' 6 0000-0003-3376-435X # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country ? _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'To Be Published' _citation.journal_id_ASTM ? _citation.journal_id_CSD 0353 _citation.journal_id_ISSN ? _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume ? _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title 'Cryo-EM structures reveal a conserved architecture for RaiA non-coding RNA' _citation.year ? _citation.database_id_CSD ? _citation.pdbx_database_id_DOI ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'He, Y.' 1 0000-0002-1368-6422 primary 'Zhong, J.' 2 ? primary 'Yang, Y.' 3 ? primary 'Gunsalus, R.P.' 4 ? primary 'Zhou, Z.H.' 5 ? primary 'Feigon, J.' 6 0000-0003-3376-435X # _entity.id 1 _entity.type polymer _entity.src_method nat _entity.pdbx_description 'RNA (204-MER)' _entity.formula_weight 66104.234 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.details ? # _entity_poly.entity_id 1 _entity_poly.type polyribonucleotide _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;UUAAGUUAGGUUUGUGGUUGAAAGUCGAUGCCAGUCGCAGGCAAAACGAUCCACGUAAGUUAAACAAAGUUUUAAUGAGC AUGGUGCGGCUUAGAAGUAAGUCCUGCCGCUUUAGGCGAGAGUAUUAGUAGUGAGAGGGUAAUUCCGGGUAGCGAAACUU CCAGCAGGCGAGUGUGGGGUCAAAGACCAGGUCAACUAACUUAA ; _entity_poly.pdbx_seq_one_letter_code_can ;UUAAGUUAGGUUUGUGGUUGAAAGUCGAUGCCAGUCGCAGGCAAAACGAUCCACGUAAGUUAAACAAAGUUUUAAUGAGC AUGGUGCGGCUUAGAAGUAAGUCCUGCCGCUUUAGGCGAGAGUAUUAGUAGUGAGAGGGUAAUUCCGGGUAGCGAAACUU CCAGCAGGCGAGUGUGGGGUCAAAGACCAGGUCAACUAACUUAA ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 U n 1 2 U n 1 3 A n 1 4 A n 1 5 G n 1 6 U n 1 7 U n 1 8 A n 1 9 G n 1 10 G n 1 11 U n 1 12 U n 1 13 U n 1 14 G n 1 15 U n 1 16 G n 1 17 G n 1 18 U n 1 19 U n 1 20 G n 1 21 A n 1 22 A n 1 23 A n 1 24 G n 1 25 U n 1 26 C n 1 27 G n 1 28 A n 1 29 U n 1 30 G n 1 31 C n 1 32 C n 1 33 A n 1 34 G n 1 35 U n 1 36 C n 1 37 G n 1 38 C n 1 39 A n 1 40 G n 1 41 G n 1 42 C n 1 43 A n 1 44 A n 1 45 A n 1 46 A n 1 47 C n 1 48 G n 1 49 A n 1 50 U n 1 51 C n 1 52 C n 1 53 A n 1 54 C n 1 55 G n 1 56 U n 1 57 A n 1 58 A n 1 59 G n 1 60 U n 1 61 U n 1 62 A n 1 63 A n 1 64 A n 1 65 C n 1 66 A n 1 67 A n 1 68 A n 1 69 G n 1 70 U n 1 71 U n 1 72 U n 1 73 U n 1 74 A n 1 75 A n 1 76 U n 1 77 G n 1 78 A n 1 79 G n 1 80 C n 1 81 A n 1 82 U n 1 83 G n 1 84 G n 1 85 U n 1 86 G n 1 87 C n 1 88 G n 1 89 G n 1 90 C n 1 91 U n 1 92 U n 1 93 A n 1 94 G n 1 95 A n 1 96 A n 1 97 G n 1 98 U n 1 99 A n 1 100 A n 1 101 G n 1 102 U n 1 103 C n 1 104 C n 1 105 U n 1 106 G n 1 107 C n 1 108 C n 1 109 G n 1 110 C n 1 111 U n 1 112 U n 1 113 U n 1 114 A n 1 115 G n 1 116 G n 1 117 C n 1 118 G n 1 119 A n 1 120 G n 1 121 A n 1 122 G n 1 123 U n 1 124 A n 1 125 U n 1 126 U n 1 127 A n 1 128 G n 1 129 U n 1 130 A n 1 131 G n 1 132 U n 1 133 G n 1 134 A n 1 135 G n 1 136 A n 1 137 G n 1 138 G n 1 139 G n 1 140 U n 1 141 A n 1 142 A n 1 143 U n 1 144 U n 1 145 C n 1 146 C n 1 147 G n 1 148 G n 1 149 G n 1 150 U n 1 151 A n 1 152 G n 1 153 C n 1 154 G n 1 155 A n 1 156 A n 1 157 A n 1 158 C n 1 159 U n 1 160 U n 1 161 C n 1 162 C n 1 163 A n 1 164 G n 1 165 C n 1 166 A n 1 167 G n 1 168 G n 1 169 C n 1 170 G n 1 171 A n 1 172 G n 1 173 U n 1 174 G n 1 175 U n 1 176 G n 1 177 G n 1 178 G n 1 179 G n 1 180 U n 1 181 C n 1 182 A n 1 183 A n 1 184 A n 1 185 G n 1 186 A n 1 187 C n 1 188 C n 1 189 A n 1 190 G n 1 191 G n 1 192 U n 1 193 C n 1 194 A n 1 195 A n 1 196 C n 1 197 U n 1 198 A n 1 199 A n 1 200 C n 1 201 U n 1 202 U n 1 203 A n 1 204 A n # _entity_src_nat.entity_id 1 _entity_src_nat.pdbx_src_id 1 _entity_src_nat.pdbx_alt_source_flag sample _entity_src_nat.pdbx_beg_seq_num 1 _entity_src_nat.pdbx_end_seq_num 204 _entity_src_nat.common_name ? _entity_src_nat.pdbx_organism_scientific 'Clostridium acetobutylicum ATCC 824' _entity_src_nat.pdbx_ncbi_taxonomy_id 272562 _entity_src_nat.genus ? _entity_src_nat.species ? _entity_src_nat.strain ? _entity_src_nat.tissue ? _entity_src_nat.tissue_fraction ? _entity_src_nat.pdbx_secretion ? _entity_src_nat.pdbx_fragment ? _entity_src_nat.pdbx_variant ? _entity_src_nat.pdbx_cell_line ? _entity_src_nat.pdbx_atcc ? _entity_src_nat.pdbx_cellular_location ? _entity_src_nat.pdbx_organ ? _entity_src_nat.pdbx_organelle ? _entity_src_nat.pdbx_cell ? _entity_src_nat.pdbx_plasmid_name ? _entity_src_nat.pdbx_plasmid_details ? _entity_src_nat.details ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight A 'RNA linking' y "ADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 C 'RNA linking' y "CYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O8 P' 323.197 G 'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 U 'RNA linking' y "URIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O9 P' 324.181 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 U 1 1 1 U U A . n A 1 2 U 2 2 2 U U A . n A 1 3 A 3 3 3 A A A . n A 1 4 A 4 4 4 A A A . n A 1 5 G 5 5 5 G G A . n A 1 6 U 6 6 6 U U A . n A 1 7 U 7 7 7 U U A . n A 1 8 A 8 8 8 A A A . n A 1 9 G 9 9 9 G G A . n A 1 10 G 10 10 10 G G A . n A 1 11 U 11 11 11 U U A . n A 1 12 U 12 12 12 U U A . n A 1 13 U 13 13 13 U U A . n A 1 14 G 14 14 14 G G A . n A 1 15 U 15 15 15 U U A . n A 1 16 G 16 16 16 G G A . n A 1 17 G 17 17 17 G G A . n A 1 18 U 18 18 18 U U A . n A 1 19 U 19 19 19 U U A . n A 1 20 G 20 20 20 G G A . n A 1 21 A 21 21 21 A A A . n A 1 22 A 22 22 22 A A A . n A 1 23 A 23 23 23 A A A . n A 1 24 G 24 24 24 G G A . n A 1 25 U 25 25 25 U U A . n A 1 26 C 26 26 26 C C A . n A 1 27 G 27 27 27 G G A . n A 1 28 A 28 28 28 A A A . n A 1 29 U 29 29 29 U U A . n A 1 30 G 30 30 30 G G A . n A 1 31 C 31 31 31 C C A . n A 1 32 C 32 32 32 C C A . n A 1 33 A 33 33 33 A A A . n A 1 34 G 34 34 34 G G A . n A 1 35 U 35 35 35 U U A . n A 1 36 C 36 36 36 C C A . n A 1 37 G 37 37 37 G G A . n A 1 38 C 38 38 38 C C A . n A 1 39 A 39 39 39 A A A . n A 1 40 G 40 40 40 G G A . n A 1 41 G 41 41 41 G G A . n A 1 42 C 42 42 42 C C A . n A 1 43 A 43 43 43 A A A . n A 1 44 A 44 44 44 A A A . n A 1 45 A 45 45 45 A A A . n A 1 46 A 46 46 46 A A A . n A 1 47 C 47 47 47 C C A . n A 1 48 G 48 48 48 G G A . n A 1 49 A 49 49 49 A A A . n A 1 50 U 50 50 50 U U A . n A 1 51 C 51 51 51 C C A . n A 1 52 C 52 52 52 C C A . n A 1 53 A 53 53 53 A A A . n A 1 54 C 54 54 54 C C A . n A 1 55 G 55 55 55 G G A . n A 1 56 U 56 56 56 U U A . n A 1 57 A 57 57 57 A A A . n A 1 58 A 58 58 58 A A A . n A 1 59 G 59 59 59 G G A . n A 1 60 U 60 60 60 U U A . n A 1 61 U 61 61 61 U U A . n A 1 62 A 62 62 62 A A A . n A 1 63 A 63 63 63 A A A . n A 1 64 A 64 64 64 A A A . n A 1 65 C 65 65 65 C C A . n A 1 66 A 66 66 66 A A A . n A 1 67 A 67 67 67 A A A . n A 1 68 A 68 68 68 A A A . n A 1 69 G 69 69 69 G G A . n A 1 70 U 70 70 70 U U A . n A 1 71 U 71 71 71 U U A . n A 1 72 U 72 72 72 U U A . n A 1 73 U 73 73 73 U U A . n A 1 74 A 74 74 74 A A A . n A 1 75 A 75 75 75 A A A . n A 1 76 U 76 76 76 U U A . n A 1 77 G 77 77 77 G G A . n A 1 78 A 78 78 78 A A A . n A 1 79 G 79 79 79 G G A . n A 1 80 C 80 80 80 C C A . n A 1 81 A 81 81 81 A A A . n A 1 82 U 82 82 82 U U A . n A 1 83 G 83 83 83 G G A . n A 1 84 G 84 84 84 G G A . n A 1 85 U 85 85 85 U U A . n A 1 86 G 86 86 86 G G A . n A 1 87 C 87 87 87 C C A . n A 1 88 G 88 88 88 G G A . n A 1 89 G 89 89 89 G G A . n A 1 90 C 90 90 90 C C A . n A 1 91 U 91 91 91 U U A . n A 1 92 U 92 92 92 U U A . n A 1 93 A 93 93 93 A A A . n A 1 94 G 94 94 94 G G A . n A 1 95 A 95 95 95 A A A . n A 1 96 A 96 96 96 A A A . n A 1 97 G 97 97 97 G G A . n A 1 98 U 98 98 98 U U A . n A 1 99 A 99 99 99 A A A . n A 1 100 A 100 100 100 A A A . n A 1 101 G 101 101 101 G G A . n A 1 102 U 102 102 102 U U A . n A 1 103 C 103 103 103 C C A . n A 1 104 C 104 104 104 C C A . n A 1 105 U 105 105 105 U U A . n A 1 106 G 106 106 106 G G A . n A 1 107 C 107 107 107 C C A . n A 1 108 C 108 108 108 C C A . n A 1 109 G 109 109 109 G G A . n A 1 110 C 110 110 110 C C A . n A 1 111 U 111 111 111 U U A . n A 1 112 U 112 112 112 U U A . n A 1 113 U 113 113 113 U U A . n A 1 114 A 114 114 114 A A A . n A 1 115 G 115 115 115 G G A . n A 1 116 G 116 116 116 G G A . n A 1 117 C 117 117 117 C C A . n A 1 118 G 118 118 118 G G A . n A 1 119 A 119 119 119 A A A . n A 1 120 G 120 120 120 G G A . n A 1 121 A 121 121 121 A A A . n A 1 122 G 122 122 122 G G A . n A 1 123 U 123 123 123 U U A . n A 1 124 A 124 124 124 A A A . n A 1 125 U 125 125 125 U U A . n A 1 126 U 126 126 126 U U A . n A 1 127 A 127 127 127 A A A . n A 1 128 G 128 128 128 G G A . n A 1 129 U 129 129 129 U U A . n A 1 130 A 130 130 130 A A A . n A 1 131 G 131 131 131 G G A . n A 1 132 U 132 132 132 U U A . n A 1 133 G 133 133 133 G G A . n A 1 134 A 134 134 134 A A A . n A 1 135 G 135 135 135 G G A . n A 1 136 A 136 136 136 A A A . n A 1 137 G 137 137 137 G G A . n A 1 138 G 138 138 138 G G A . n A 1 139 G 139 139 139 G G A . n A 1 140 U 140 140 140 U U A . n A 1 141 A 141 141 141 A A A . n A 1 142 A 142 142 142 A A A . n A 1 143 U 143 143 143 U U A . n A 1 144 U 144 144 144 U U A . n A 1 145 C 145 145 145 C C A . n A 1 146 C 146 146 146 C C A . n A 1 147 G 147 147 147 G G A . n A 1 148 G 148 148 148 G G A . n A 1 149 G 149 149 149 G G A . n A 1 150 U 150 150 150 U U A . n A 1 151 A 151 151 151 A A A . n A 1 152 G 152 152 152 G G A . n A 1 153 C 153 153 153 C C A . n A 1 154 G 154 154 154 G G A . n A 1 155 A 155 155 155 A A A . n A 1 156 A 156 156 156 A A A . n A 1 157 A 157 157 157 A A A . n A 1 158 C 158 158 158 C C A . n A 1 159 U 159 159 159 U U A . n A 1 160 U 160 160 160 U U A . n A 1 161 C 161 161 161 C C A . n A 1 162 C 162 162 162 C C A . n A 1 163 A 163 163 163 A A A . n A 1 164 G 164 164 164 G G A . n A 1 165 C 165 165 165 C C A . n A 1 166 A 166 166 166 A A A . n A 1 167 G 167 167 167 G G A . n A 1 168 G 168 168 168 G G A . n A 1 169 C 169 169 169 C C A . n A 1 170 G 170 170 170 G G A . n A 1 171 A 171 171 171 A A A . n A 1 172 G 172 172 172 G G A . n A 1 173 U 173 173 173 U U A . n A 1 174 G 174 174 174 G G A . n A 1 175 U 175 175 175 U U A . n A 1 176 G 176 176 176 G G A . n A 1 177 G 177 177 177 G G A . n A 1 178 G 178 178 178 G G A . n A 1 179 G 179 179 179 G G A . n A 1 180 U 180 180 180 U U A . n A 1 181 C 181 181 181 C C A . n A 1 182 A 182 182 182 A A A . n A 1 183 A 183 183 183 A A A . n A 1 184 A 184 184 184 A A A . n A 1 185 G 185 185 185 G G A . n A 1 186 A 186 186 186 A A A . n A 1 187 C 187 187 187 C C A . n A 1 188 C 188 188 188 C C A . n A 1 189 A 189 189 189 A A A . n A 1 190 G 190 190 190 G G A . n A 1 191 G 191 191 191 G G A . n A 1 192 U 192 192 192 U U A . n A 1 193 C 193 193 193 C C A . n A 1 194 A 194 194 194 A A A . n A 1 195 A 195 195 195 A A A . n A 1 196 C 196 196 196 C C A . n A 1 197 U 197 197 197 U U A . n A 1 198 A 198 198 198 A A A . n A 1 199 A 199 199 199 A A A . n A 1 200 C 200 200 200 C C A . n A 1 201 U 201 201 201 U U A . n A 1 202 U 202 202 202 U U A . n A 1 203 A 203 203 203 A A A . n A 1 204 A 204 204 204 A A A . n # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 9E73 _cell.details ? _cell.formula_units_Z ? _cell.length_a 1.00 _cell.length_a_esd ? _cell.length_b 1.00 _cell.length_b_esd ? _cell.length_c 1.00 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB ? _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 9E73 _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 9E73 _exptl.crystals_number ? _exptl.details ? _exptl.method 'ELECTRON MICROSCOPY' _exptl.method_details ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean ? _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 9E73 _refine.pdbx_refine_id 'ELECTRON MICROSCOPY' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 3.0 _refine.ls_d_res_low ? _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs ? _refine.ls_number_reflns_R_free ? _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs ? _refine.ls_percent_reflns_R_free ? _refine.ls_R_factor_all ? _refine.ls_R_factor_obs ? _refine.ls_R_factor_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work ? _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.correlation_coeff_I_to_Fcsqd_work ? _refine.correlation_coeff_I_to_Fcsqd_free ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values 'REAL-SPACE (WEIGHTED MAP SUM AT ATOM CENTERS)' _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id ? _refine.overall_SU_B ? _refine.overall_SU_ML ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_Zscore _refine_ls_restr.pdbx_restraint_function 'ELECTRON MICROSCOPY' ? 0.002 ? 4907 ? f_bond_d ? ? ? 'ELECTRON MICROSCOPY' ? 0.544 ? 7652 ? f_angle_d ? ? ? 'ELECTRON MICROSCOPY' ? 22.282 ? 2941 ? f_dihedral_angle_d ? ? ? 'ELECTRON MICROSCOPY' ? 0.033 ? 1020 ? f_chiral_restr ? ? ? 'ELECTRON MICROSCOPY' ? 0.005 ? 204 ? f_plane_restr ? ? ? # _struct.entry_id 9E73 _struct.title 'Cryo-EM structure of RaiA RNA from Clostridium acetobutylicum' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 9E73 _struct_keywords.text 'Non-coding RNA, cryo-EM, raiA motif RNA, KhpA, KhpB, ModT, RNA' _struct_keywords.pdbx_keywords RNA # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_ref.id 1 _struct_ref.db_name GB _struct_ref.db_code AE001437.1 _struct_ref.pdbx_db_accession 25168256 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;UUAAGUUAGGUUUGUGGUUGAAAGUCGAUGCCAGUCGCAGGCAAAACGAUCCACGUAAGUUAAACAAAGUUUUAAUGAGC AUGGUGCGGCUUAGAAGUAAGUCCUGCCGCUUUAGGCGAGAGUAUUAGUAGUGAGAGGGUAAUUCCGGGUAGCGAAACUU CCAGCAGGCGAGUGUGGGGUCAAAGACCAGGUCAACUAACUUAA ; _struct_ref.pdbx_align_begin 2985433 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 9E73 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 204 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession 25168256 _struct_ref_seq.db_align_beg 2985433 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 2985230 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 204 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'electron microscopy' _pdbx_struct_assembly_auth_evidence.details 'not applicable' # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role hydrog1 hydrog ? ? A U 1 N3 ? ? ? 1_555 A A 204 N1 ? ? A U 1 A A 204 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A U 1 O4 ? ? ? 1_555 A A 204 N6 ? ? A U 1 A A 204 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A U 2 N3 ? ? ? 1_555 A A 203 N1 ? ? A U 2 A A 203 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A U 2 O4 ? ? ? 1_555 A A 203 N6 ? ? A U 2 A A 203 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A A 3 N1 ? ? ? 1_555 A U 202 N3 ? ? A A 3 A U 202 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A A 3 N6 ? ? ? 1_555 A U 202 O4 ? ? A A 3 A U 202 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A A 4 N1 ? ? ? 1_555 A U 201 N3 ? ? A A 4 A U 201 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A A 4 N6 ? ? ? 1_555 A U 201 O4 ? ? A A 4 A U 201 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A G 5 N1 ? ? ? 1_555 A C 200 N3 ? ? A G 5 A C 200 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A G 5 N2 ? ? ? 1_555 A C 200 O2 ? ? A G 5 A C 200 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A G 5 O6 ? ? ? 1_555 A C 200 N4 ? ? A G 5 A C 200 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A U 6 N3 ? ? ? 1_555 A A 199 N1 ? ? A U 6 A A 199 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A U 6 O4 ? ? ? 1_555 A A 199 N6 ? ? A U 6 A A 199 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A U 7 N3 ? ? ? 1_555 A A 198 N1 ? ? A U 7 A A 198 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A U 7 O4 ? ? ? 1_555 A A 198 N6 ? ? A U 7 A A 198 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A A 8 N1 ? ? ? 1_555 A U 197 N3 ? ? A A 8 A U 197 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A A 8 N6 ? ? ? 1_555 A U 197 O4 ? ? A A 8 A U 197 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A G 9 N1 ? ? ? 1_555 A C 196 N3 ? ? A G 9 A C 196 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A G 9 N2 ? ? ? 1_555 A C 196 O2 ? ? A G 9 A C 196 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A G 9 O6 ? ? ? 1_555 A C 196 N4 ? ? A G 9 A C 196 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A G 10 N1 ? ? ? 1_555 A G 14 O6 ? ? A G 10 A G 14 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog22 hydrog ? ? A G 10 N2 ? ? ? 1_555 A G 14 N7 ? ? A G 10 A G 14 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog23 hydrog ? ? A G 10 O6 ? ? ? 1_555 A C 193 N4 ? ? A G 10 A C 193 1_555 ? ? ? ? ? ? 'G-C PAIR' ? ? ? hydrog24 hydrog ? ? A U 12 N3 ? ? ? 1_555 A A 195 N1 ? ? A U 12 A A 195 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? A U 12 O4 ? ? ? 1_555 A A 195 N6 ? ? A U 12 A A 195 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? A U 13 N3 ? ? ? 1_555 A A 194 N1 ? ? A U 13 A A 194 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? A U 13 O4 ? ? ? 1_555 A A 194 N6 ? ? A U 13 A A 194 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? A G 14 N1 ? ? ? 1_555 A C 193 N3 ? ? A G 14 A C 193 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? A G 14 N2 ? ? ? 1_555 A C 193 O2 ? ? A G 14 A C 193 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? A G 14 O6 ? ? ? 1_555 A C 193 N4 ? ? A G 14 A C 193 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? A U 15 N3 ? ? ? 1_555 A A 189 N1 ? ? A U 15 A A 189 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? A U 15 O4 ? ? ? 1_555 A A 189 N6 ? ? A U 15 A A 189 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? A G 16 N1 ? ? ? 1_555 A C 188 N3 ? ? A G 16 A C 188 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? A G 16 N2 ? ? ? 1_555 A C 188 O2 ? ? A G 16 A C 188 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? A G 16 O6 ? ? ? 1_555 A C 188 N4 ? ? A G 16 A C 188 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? A G 17 N1 ? ? ? 1_555 A C 187 N3 ? ? A G 17 A C 187 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? A G 17 N2 ? ? ? 1_555 A C 187 O2 ? ? A G 17 A C 187 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? A G 17 O6 ? ? ? 1_555 A C 187 N4 ? ? A G 17 A C 187 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? A U 18 N3 ? ? ? 1_555 A A 186 N1 ? ? A U 18 A A 186 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog40 hydrog ? ? A U 18 O4 ? ? ? 1_555 A A 186 N6 ? ? A U 18 A A 186 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog41 hydrog ? ? A U 19 N3 ? ? ? 1_555 A A 23 N7 ? ? A U 19 A A 23 1_555 ? ? ? ? ? ? 'REVERSED HOOGSTEEN' ? ? ? hydrog42 hydrog ? ? A U 19 O2 ? ? ? 1_555 A A 23 N6 ? ? A U 19 A A 23 1_555 ? ? ? ? ? ? 'REVERSED HOOGSTEEN' ? ? ? hydrog43 hydrog ? ? A G 20 N2 ? ? ? 1_555 A A 183 N7 ? ? A G 20 A A 183 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog44 hydrog ? ? A G 20 N3 ? ? ? 1_555 A A 183 N6 ? ? A G 20 A A 183 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog45 hydrog ? ? A G 24 N1 ? ? ? 1_555 A U 50 O2 ? ? A G 24 A U 50 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog46 hydrog ? ? A G 24 O6 ? ? ? 1_555 A U 50 N3 ? ? A G 24 A U 50 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog47 hydrog ? ? A U 25 N3 ? ? ? 1_555 A A 49 N1 ? ? A U 25 A A 49 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog48 hydrog ? ? A U 25 O4 ? ? ? 1_555 A A 49 N6 ? ? A U 25 A A 49 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog49 hydrog ? ? A C 26 N3 ? ? ? 1_555 A G 48 N1 ? ? A C 26 A G 48 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog50 hydrog ? ? A C 26 N4 ? ? ? 1_555 A G 48 O6 ? ? A C 26 A G 48 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog51 hydrog ? ? A C 26 O2 ? ? ? 1_555 A G 48 N2 ? ? A C 26 A G 48 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog52 hydrog ? ? A G 27 N2 ? ? ? 1_555 A C 31 O2 ? ? A G 27 A C 31 1_555 ? ? ? ? ? ? 'G-C PAIR' ? ? ? hydrog53 hydrog ? ? A G 27 N2 ? ? ? 1_555 A C 42 O2 ? ? A G 27 A C 42 1_555 ? ? ? ? ? ? 'G-C PAIR' ? ? ? hydrog54 hydrog ? ? A G 27 N1 ? ? ? 1_555 A C 47 N3 ? ? A G 27 A C 47 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog55 hydrog ? ? A G 27 N2 ? ? ? 1_555 A C 47 O2 ? ? A G 27 A C 47 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog56 hydrog ? ? A G 27 O6 ? ? ? 1_555 A C 47 N4 ? ? A G 27 A C 47 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog57 hydrog ? ? A A 28 N6 ? ? ? 1_555 A A 45 N1 ? ? A A 28 A A 45 1_555 ? ? ? ? ? ? TYPE_5_PAIR ? ? ? hydrog58 hydrog ? ? A A 28 N7 ? ? ? 1_555 A A 45 N6 ? ? A A 28 A A 45 1_555 ? ? ? ? ? ? TYPE_5_PAIR ? ? ? hydrog59 hydrog ? ? A G 30 N1 ? ? ? 1_555 A C 42 N3 ? ? A G 30 A C 42 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog60 hydrog ? ? A G 30 N2 ? ? ? 1_555 A C 42 O2 ? ? A G 30 A C 42 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog61 hydrog ? ? A G 30 O6 ? ? ? 1_555 A C 42 N4 ? ? A G 30 A C 42 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog62 hydrog ? ? A C 31 N3 ? ? ? 1_555 A G 41 N1 ? ? A C 31 A G 41 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog63 hydrog ? ? A C 31 N4 ? ? ? 1_555 A G 41 O6 ? ? A C 31 A G 41 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog64 hydrog ? ? A C 31 O2 ? ? ? 1_555 A G 41 N2 ? ? A C 31 A G 41 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog65 hydrog ? ? A C 32 N3 ? ? ? 1_555 A G 40 N1 ? ? A C 32 A G 40 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog66 hydrog ? ? A C 32 N4 ? ? ? 1_555 A G 40 O6 ? ? A C 32 A G 40 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog67 hydrog ? ? A C 32 O2 ? ? ? 1_555 A G 40 N2 ? ? A C 32 A G 40 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog68 hydrog ? ? A G 34 N1 ? ? ? 1_555 A C 90 N3 ? ? A G 34 A C 90 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog69 hydrog ? ? A G 34 N2 ? ? ? 1_555 A C 90 O2 ? ? A G 34 A C 90 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog70 hydrog ? ? A G 34 O6 ? ? ? 1_555 A C 90 N4 ? ? A G 34 A C 90 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog71 hydrog ? ? A U 35 N3 ? ? ? 1_555 A G 89 O6 ? ? A U 35 A G 89 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog72 hydrog ? ? A U 35 O2 ? ? ? 1_555 A G 89 N1 ? ? A U 35 A G 89 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog73 hydrog ? ? A C 36 N3 ? ? ? 1_555 A G 88 N1 ? ? A C 36 A G 88 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog74 hydrog ? ? A C 36 N4 ? ? ? 1_555 A G 88 O6 ? ? A C 36 A G 88 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog75 hydrog ? ? A C 36 O2 ? ? ? 1_555 A G 88 N2 ? ? A C 36 A G 88 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog76 hydrog ? ? A G 37 N1 ? ? ? 1_555 A C 87 N3 ? ? A G 37 A C 87 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog77 hydrog ? ? A G 37 N2 ? ? ? 1_555 A C 87 O2 ? ? A G 37 A C 87 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog78 hydrog ? ? A G 37 O6 ? ? ? 1_555 A C 87 N4 ? ? A G 37 A C 87 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog79 hydrog ? ? A C 38 N3 ? ? ? 1_555 A G 86 N1 ? ? A C 38 A G 86 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog80 hydrog ? ? A C 38 N4 ? ? ? 1_555 A G 86 O6 ? ? A C 38 A G 86 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog81 hydrog ? ? A C 38 O2 ? ? ? 1_555 A G 86 N2 ? ? A C 38 A G 86 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog82 hydrog ? ? A A 39 N1 ? ? ? 1_555 A U 85 N3 ? ? A A 39 A U 85 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog83 hydrog ? ? A A 39 N6 ? ? ? 1_555 A U 85 O4 ? ? A A 39 A U 85 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog84 hydrog ? ? A G 41 N2 ? ? ? 1_555 A C 47 O2 ? ? A G 41 A C 47 1_555 ? ? ? ? ? ? 'G-C PAIR' ? ? ? hydrog85 hydrog ? ? A C 51 N3 ? ? ? 1_555 A G 177 N1 ? ? A C 51 A G 177 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog86 hydrog ? ? A C 51 N4 ? ? ? 1_555 A G 177 O6 ? ? A C 51 A G 177 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog87 hydrog ? ? A C 51 O2 ? ? ? 1_555 A G 177 N2 ? ? A C 51 A G 177 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog88 hydrog ? ? A C 52 N3 ? ? ? 1_555 A G 176 N1 ? ? A C 52 A G 176 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog89 hydrog ? ? A C 52 N4 ? ? ? 1_555 A G 176 O6 ? ? A C 52 A G 176 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog90 hydrog ? ? A C 52 O2 ? ? ? 1_555 A G 176 N2 ? ? A C 52 A G 176 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog91 hydrog ? ? A A 53 N1 ? ? ? 1_555 A U 175 N3 ? ? A A 53 A U 175 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog92 hydrog ? ? A A 53 N6 ? ? ? 1_555 A U 175 O4 ? ? A A 53 A U 175 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog93 hydrog ? ? A C 54 N3 ? ? ? 1_555 A G 174 N1 ? ? A C 54 A G 174 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog94 hydrog ? ? A C 54 N4 ? ? ? 1_555 A G 174 O6 ? ? A C 54 A G 174 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog95 hydrog ? ? A C 54 O2 ? ? ? 1_555 A G 174 N2 ? ? A C 54 A G 174 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog96 hydrog ? ? A G 55 N1 ? ? ? 1_555 A G 79 O6 ? ? A G 55 A G 79 1_555 ? ? ? ? ? ? TYPE_3_PAIR ? ? ? hydrog97 hydrog ? ? A G 55 O6 ? ? ? 1_555 A G 79 N1 ? ? A G 55 A G 79 1_555 ? ? ? ? ? ? TYPE_3_PAIR ? ? ? hydrog98 hydrog ? ? A U 56 N3 ? ? ? 1_555 A A 78 N7 ? ? A U 56 A A 78 1_555 ? ? ? ? ? ? 'REVERSED HOOGSTEEN' ? ? ? hydrog99 hydrog ? ? A U 56 O2 ? ? ? 1_555 A A 78 N6 ? ? A U 56 A A 78 1_555 ? ? ? ? ? ? 'REVERSED HOOGSTEEN' ? ? ? hydrog100 hydrog ? ? A A 58 N6 ? ? ? 1_555 A G 77 N3 ? ? A A 58 A G 77 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog101 hydrog ? ? A A 58 N7 ? ? ? 1_555 A G 77 N2 ? ? A A 58 A G 77 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog102 hydrog ? ? A G 59 N1 ? ? ? 1_555 A U 76 O2 ? ? A G 59 A U 76 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog103 hydrog ? ? A G 59 O6 ? ? ? 1_555 A U 76 N3 ? ? A G 59 A U 76 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog104 hydrog ? ? A U 60 N3 ? ? ? 1_555 A A 75 N1 ? ? A U 60 A A 75 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog105 hydrog ? ? A U 60 O4 ? ? ? 1_555 A A 75 N6 ? ? A U 60 A A 75 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog106 hydrog ? ? A U 61 N3 ? ? ? 1_555 A A 74 N1 ? ? A U 61 A A 74 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog107 hydrog ? ? A U 61 O4 ? ? ? 1_555 A A 74 N6 ? ? A U 61 A A 74 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog108 hydrog ? ? A A 62 N1 ? ? ? 1_555 A U 73 N3 ? ? A A 62 A U 73 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog109 hydrog ? ? A A 62 N6 ? ? ? 1_555 A U 73 O4 ? ? A A 62 A U 73 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog110 hydrog ? ? A A 63 N1 ? ? ? 1_555 A U 72 N3 ? ? A A 63 A U 72 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog111 hydrog ? ? A A 63 N6 ? ? ? 1_555 A U 72 O4 ? ? A A 63 A U 72 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog112 hydrog ? ? A A 64 N1 ? ? ? 1_555 A U 71 N3 ? ? A A 64 A U 71 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog113 hydrog ? ? A A 64 N6 ? ? ? 1_555 A U 71 O4 ? ? A A 64 A U 71 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog114 hydrog ? ? A C 65 N3 ? ? ? 1_555 A A 68 N6 ? ? A C 65 A A 68 1_555 ? ? ? ? ? ? TYPE_25_PAIR ? ? ? hydrog115 hydrog ? ? A C 65 N4 ? ? ? 1_555 A A 68 N7 ? ? A C 65 A A 68 1_555 ? ? ? ? ? ? TYPE_25_PAIR ? ? ? hydrog116 hydrog ? ? A C 80 N4 ? ? ? 1_555 A G 174 O6 ? ? A C 80 A G 174 1_555 ? ? ? ? ? ? 'C-G PAIR' ? ? ? hydrog117 hydrog ? ? A A 81 N7 ? ? ? 1_555 A G 178 N2 ? ? A A 81 A G 178 1_555 ? ? ? ? ? ? 'A-G MISPAIR' ? ? ? hydrog118 hydrog ? ? A U 82 N3 ? ? ? 1_555 A A 182 N1 ? ? A U 82 A A 182 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog119 hydrog ? ? A U 82 O4 ? ? ? 1_555 A A 182 N6 ? ? A U 82 A A 182 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog120 hydrog ? ? A G 83 N1 ? ? ? 1_555 A C 181 N3 ? ? A G 83 A C 181 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog121 hydrog ? ? A G 83 N2 ? ? ? 1_555 A C 181 O2 ? ? A G 83 A C 181 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog122 hydrog ? ? A G 83 O6 ? ? ? 1_555 A C 181 N4 ? ? A G 83 A C 181 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog123 hydrog ? ? A G 94 N2 ? ? ? 1_555 A U 173 O2 ? ? A G 94 A U 173 1_555 ? ? ? ? ? ? 'G-U MISPAIR' ? ? ? hydrog124 hydrog ? ? A A 100 N3 ? ? ? 1_555 A G 168 N2 ? ? A A 100 A G 168 1_555 ? ? ? ? ? ? 'A-G MISPAIR' ? ? ? hydrog125 hydrog ? ? A G 101 N1 ? ? ? 1_555 A C 169 N3 ? ? A G 101 A C 169 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog126 hydrog ? ? A G 101 N2 ? ? ? 1_555 A C 169 O2 ? ? A G 101 A C 169 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog127 hydrog ? ? A G 101 O6 ? ? ? 1_555 A C 169 N4 ? ? A G 101 A C 169 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog128 hydrog ? ? A C 103 N3 ? ? ? 1_555 A G 168 N1 ? ? A C 103 A G 168 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog129 hydrog ? ? A C 103 N4 ? ? ? 1_555 A G 168 O6 ? ? A C 103 A G 168 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog130 hydrog ? ? A C 103 O2 ? ? ? 1_555 A G 168 N2 ? ? A C 103 A G 168 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog131 hydrog ? ? A C 104 N3 ? ? ? 1_555 A G 167 N1 ? ? A C 104 A G 167 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog132 hydrog ? ? A C 104 N4 ? ? ? 1_555 A G 167 O6 ? ? A C 104 A G 167 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog133 hydrog ? ? A C 104 O2 ? ? ? 1_555 A G 167 N2 ? ? A C 104 A G 167 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog134 hydrog ? ? A U 105 N3 ? ? ? 1_555 A A 166 N1 ? ? A U 105 A A 166 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog135 hydrog ? ? A U 105 O4 ? ? ? 1_555 A A 166 N6 ? ? A U 105 A A 166 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog136 hydrog ? ? A G 106 N1 ? ? ? 1_555 A C 165 N3 ? ? A G 106 A C 165 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog137 hydrog ? ? A G 106 N2 ? ? ? 1_555 A C 165 O2 ? ? A G 106 A C 165 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog138 hydrog ? ? A G 106 O6 ? ? ? 1_555 A C 165 N4 ? ? A G 106 A C 165 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog139 hydrog ? ? A C 107 N3 ? ? ? 1_555 A G 164 N1 ? ? A C 107 A G 164 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog140 hydrog ? ? A C 107 N4 ? ? ? 1_555 A G 164 O6 ? ? A C 107 A G 164 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog141 hydrog ? ? A C 107 O2 ? ? ? 1_555 A G 164 N2 ? ? A C 107 A G 164 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog142 hydrog ? ? A C 108 N3 ? ? ? 1_555 A G 118 N1 ? ? A C 108 A G 118 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog143 hydrog ? ? A C 108 N4 ? ? ? 1_555 A G 118 O6 ? ? A C 108 A G 118 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog144 hydrog ? ? A C 108 O2 ? ? ? 1_555 A G 118 N2 ? ? A C 108 A G 118 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog145 hydrog ? ? A G 109 N1 ? ? ? 1_555 A C 117 N3 ? ? A G 109 A C 117 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog146 hydrog ? ? A G 109 N2 ? ? ? 1_555 A C 117 O2 ? ? A G 109 A C 117 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog147 hydrog ? ? A G 109 O6 ? ? ? 1_555 A C 117 N4 ? ? A G 109 A C 117 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog148 hydrog ? ? A C 110 N3 ? ? ? 1_555 A G 116 N1 ? ? A C 110 A G 116 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog149 hydrog ? ? A C 110 N4 ? ? ? 1_555 A G 116 O6 ? ? A C 110 A G 116 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog150 hydrog ? ? A C 110 O2 ? ? ? 1_555 A G 116 N2 ? ? A C 110 A G 116 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog151 hydrog ? ? A U 111 N3 ? ? ? 1_555 A G 115 O6 ? ? A U 111 A G 115 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog152 hydrog ? ? A U 111 O2 ? ? ? 1_555 A G 115 N1 ? ? A U 111 A G 115 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog153 hydrog ? ? A G 120 N1 ? ? ? 1_555 A C 162 N3 ? ? A G 120 A C 162 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog154 hydrog ? ? A G 120 N2 ? ? ? 1_555 A C 162 O2 ? ? A G 120 A C 162 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog155 hydrog ? ? A G 120 O6 ? ? ? 1_555 A C 162 N4 ? ? A G 120 A C 162 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog156 hydrog ? ? A A 121 N6 ? ? ? 1_555 A G 170 N3 ? ? A A 121 A G 170 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog157 hydrog ? ? A A 121 N7 ? ? ? 1_555 A G 170 N2 ? ? A A 121 A G 170 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog158 hydrog ? ? A G 122 N1 ? ? ? 1_555 A C 161 N3 ? ? A G 122 A C 161 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog159 hydrog ? ? A G 122 N2 ? ? ? 1_555 A C 161 O2 ? ? A G 122 A C 161 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog160 hydrog ? ? A G 122 O6 ? ? ? 1_555 A C 161 N4 ? ? A G 122 A C 161 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog161 hydrog ? ? A U 123 N3 ? ? ? 1_555 A U 160 O2 ? ? A U 123 A U 160 1_555 ? ? ? ? ? ? TYPE_16_PAIR ? ? ? hydrog162 hydrog ? ? A U 123 O4 ? ? ? 1_555 A U 160 N3 ? ? A U 123 A U 160 1_555 ? ? ? ? ? ? TYPE_16_PAIR ? ? ? hydrog163 hydrog ? ? A A 124 N1 ? ? ? 1_555 A U 159 N3 ? ? A A 124 A U 159 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog164 hydrog ? ? A A 124 N6 ? ? ? 1_555 A U 159 O4 ? ? A A 124 A U 159 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog165 hydrog ? ? A U 125 O2 ? ? ? 1_555 A C 158 N4 ? ? A U 125 A C 158 1_555 ? ? ? ? ? ? 'U-C MISPAIR' ? ? ? hydrog166 hydrog ? ? A U 126 O2 ? ? ? 1_555 A A 157 N6 ? ? A U 126 A A 157 1_555 ? ? ? ? ? ? 'U-A PAIR' ? ? ? hydrog167 hydrog ? ? A A 127 N6 ? ? ? 1_555 A A 156 N7 ? ? A A 127 A A 156 1_555 ? ? ? ? ? ? TYPE_2_PAIR ? ? ? hydrog168 hydrog ? ? A A 127 N7 ? ? ? 1_555 A A 156 N6 ? ? A A 127 A A 156 1_555 ? ? ? ? ? ? TYPE_2_PAIR ? ? ? hydrog169 hydrog ? ? A U 129 N3 ? ? ? 1_555 A A 155 N7 ? ? A U 129 A A 155 1_555 ? ? ? ? ? ? 'REVERSED HOOGSTEEN' ? ? ? hydrog170 hydrog ? ? A U 129 O2 ? ? ? 1_555 A A 155 N6 ? ? A U 129 A A 155 1_555 ? ? ? ? ? ? 'REVERSED HOOGSTEEN' ? ? ? hydrog171 hydrog ? ? A A 130 N6 ? ? ? 1_555 A G 154 N3 ? ? A A 130 A G 154 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog172 hydrog ? ? A A 130 N7 ? ? ? 1_555 A G 154 N2 ? ? A A 130 A G 154 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog173 hydrog ? ? A G 131 N1 ? ? ? 1_555 A C 153 N3 ? ? A G 131 A C 153 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog174 hydrog ? ? A G 131 N2 ? ? ? 1_555 A C 153 O2 ? ? A G 131 A C 153 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog175 hydrog ? ? A G 131 O6 ? ? ? 1_555 A C 153 N4 ? ? A G 131 A C 153 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog176 hydrog ? ? A U 132 N3 ? ? ? 1_555 A G 152 O6 ? ? A U 132 A G 152 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog177 hydrog ? ? A U 132 O2 ? ? ? 1_555 A G 152 N1 ? ? A U 132 A G 152 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog178 hydrog ? ? A G 133 N2 ? ? ? 1_555 A A 151 N7 ? ? A G 133 A A 151 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog179 hydrog ? ? A G 133 N3 ? ? ? 1_555 A A 151 N6 ? ? A G 133 A A 151 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog180 hydrog ? ? A A 134 N6 ? ? ? 1_555 A U 150 O2 ? ? A A 134 A U 150 1_555 ? ? ? ? ? ? 'REVERSED HOOGSTEEN' ? ? ? hydrog181 hydrog ? ? A A 134 N7 ? ? ? 1_555 A U 150 N3 ? ? A A 134 A U 150 1_555 ? ? ? ? ? ? 'REVERSED HOOGSTEEN' ? ? ? hydrog182 hydrog ? ? A G 135 N7 ? ? ? 1_555 A G 148 N1 ? ? A G 135 A G 148 1_555 ? ? ? ? ? ? TYPE_7_PAIR ? ? ? hydrog183 hydrog ? ? A G 135 O6 ? ? ? 1_555 A G 148 N2 ? ? A G 135 A G 148 1_555 ? ? ? ? ? ? TYPE_7_PAIR ? ? ? hydrog184 hydrog ? ? A A 136 N6 ? ? ? 1_555 A G 147 N3 ? ? A A 136 A G 147 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog185 hydrog ? ? A A 136 N7 ? ? ? 1_555 A G 147 N2 ? ? A A 136 A G 147 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog186 hydrog ? ? A G 137 N1 ? ? ? 1_555 A C 146 N3 ? ? A G 137 A C 146 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog187 hydrog ? ? A G 137 N2 ? ? ? 1_555 A C 146 O2 ? ? A G 137 A C 146 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog188 hydrog ? ? A G 137 O6 ? ? ? 1_555 A C 146 N4 ? ? A G 137 A C 146 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog189 hydrog ? ? A G 138 N1 ? ? ? 1_555 A C 145 N3 ? ? A G 138 A C 145 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog190 hydrog ? ? A G 138 N2 ? ? ? 1_555 A C 145 O2 ? ? A G 138 A C 145 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog191 hydrog ? ? A G 138 O6 ? ? ? 1_555 A C 145 N4 ? ? A G 138 A C 145 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog192 hydrog ? ? A G 139 N1 ? ? ? 1_555 A U 144 O4 ? ? A G 139 A U 144 1_555 ? ? ? ? ? ? 'G-U MISPAIR' ? ? ? hydrog193 hydrog ? ? A G 179 N2 ? ? ? 1_555 A A 184 N1 ? ? A G 179 A A 184 1_555 ? ? ? ? ? ? TYPE_10_PAIR ? ? ? hydrog194 hydrog ? ? A G 179 N3 ? ? ? 1_555 A A 184 N6 ? ? A G 179 A A 184 1_555 ? ? ? ? ? ? TYPE_10_PAIR ? ? ? # _struct_conn_type.id hydrog _struct_conn_type.criteria ? _struct_conn_type.reference ? # _pdbx_entry_details.entry_id 9E73 _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.has_ligand_of_interest Y _pdbx_entry_details.has_protein_modification N # _em_3d_fitting.id 1 _em_3d_fitting.entry_id 9E73 _em_3d_fitting.method ? _em_3d_fitting.target_criteria ? _em_3d_fitting.details ? _em_3d_fitting.overall_b_value ? _em_3d_fitting.ref_space ? _em_3d_fitting.ref_protocol ? # _em_3d_reconstruction.entry_id 9E73 _em_3d_reconstruction.id 1 _em_3d_reconstruction.method ? _em_3d_reconstruction.algorithm ? _em_3d_reconstruction.citation_id ? _em_3d_reconstruction.details ? _em_3d_reconstruction.resolution 3.0 _em_3d_reconstruction.resolution_method 'FSC 0.143 CUT-OFF' _em_3d_reconstruction.magnification_calibration ? _em_3d_reconstruction.nominal_pixel_size ? _em_3d_reconstruction.actual_pixel_size ? _em_3d_reconstruction.num_particles 439963 _em_3d_reconstruction.euler_angles_details ? _em_3d_reconstruction.num_class_averages ? _em_3d_reconstruction.refinement_type ? _em_3d_reconstruction.image_processing_id 1 _em_3d_reconstruction.symmetry_type POINT # _em_buffer.id 1 _em_buffer.specimen_id 1 _em_buffer.name ? _em_buffer.details ? _em_buffer.pH 7.5 # _em_entity_assembly.id 1 _em_entity_assembly.parent_id 0 _em_entity_assembly.source NATURAL _em_entity_assembly.type COMPLEX _em_entity_assembly.name 'RaiA RNA from Clostridium acetobutylicum' _em_entity_assembly.details ? _em_entity_assembly.synonym ? _em_entity_assembly.oligomeric_details ? _em_entity_assembly.entity_id_list 1 # _em_imaging.entry_id 9E73 _em_imaging.id 1 _em_imaging.astigmatism ? _em_imaging.electron_beam_tilt_params ? _em_imaging.residual_tilt ? _em_imaging.microscope_model 'TFS KRIOS' _em_imaging.specimen_holder_type ? _em_imaging.specimen_holder_model ? _em_imaging.details ? _em_imaging.date ? _em_imaging.accelerating_voltage 300 _em_imaging.illumination_mode 'FLOOD BEAM' _em_imaging.mode 'BRIGHT FIELD' _em_imaging.nominal_cs ? _em_imaging.nominal_defocus_min 500 _em_imaging.nominal_defocus_max 2500 _em_imaging.calibrated_defocus_min ? _em_imaging.calibrated_defocus_max ? _em_imaging.tilt_angle_min ? _em_imaging.tilt_angle_max ? _em_imaging.nominal_magnification ? _em_imaging.calibrated_magnification ? _em_imaging.electron_source 'FIELD EMISSION GUN' _em_imaging.citation_id ? _em_imaging.temperature ? _em_imaging.detector_distance ? _em_imaging.recording_temperature_minimum ? _em_imaging.recording_temperature_maximum ? _em_imaging.alignment_procedure ? _em_imaging.c2_aperture_diameter ? _em_imaging.specimen_id 1 _em_imaging.cryogen ? _em_imaging.objective_aperture ? _em_imaging.microscope_serial_number ? _em_imaging.microscope_version ? # _em_vitrification.entry_id 9E73 _em_vitrification.id 1 _em_vitrification.specimen_id 1 _em_vitrification.cryogen_name ETHANE-PROPANE _em_vitrification.humidity ? _em_vitrification.temp ? _em_vitrification.chamber_temperature ? _em_vitrification.instrument ? _em_vitrification.method ? _em_vitrification.time_resolved_state ? _em_vitrification.citation_id ? _em_vitrification.details ? # _em_experiment.entry_id 9E73 _em_experiment.id 1 _em_experiment.reconstruction_method 'SINGLE PARTICLE' _em_experiment.aggregation_state PARTICLE _em_experiment.entity_assembly_id 1 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal A OP3 O N N 1 A P P N N 2 A OP1 O N N 3 A OP2 O N N 4 A "O5'" O N N 5 A "C5'" C N N 6 A "C4'" C N R 7 A "O4'" O N N 8 A "C3'" C N S 9 A "O3'" O N N 10 A "C2'" C N R 11 A "O2'" O N N 12 A "C1'" C N R 13 A N9 N Y N 14 A C8 C Y N 15 A N7 N Y N 16 A C5 C Y N 17 A C6 C Y N 18 A N6 N N N 19 A N1 N Y N 20 A C2 C Y N 21 A N3 N Y N 22 A C4 C Y N 23 A HOP3 H N N 24 A HOP2 H N N 25 A "H5'" H N N 26 A "H5''" H N N 27 A "H4'" H N N 28 A "H3'" H N N 29 A "HO3'" H N N 30 A "H2'" H N N 31 A "HO2'" H N N 32 A "H1'" H N N 33 A H8 H N N 34 A H61 H N N 35 A H62 H N N 36 A H2 H N N 37 C OP3 O N N 38 C P P N N 39 C OP1 O N N 40 C OP2 O N N 41 C "O5'" O N N 42 C "C5'" C N N 43 C "C4'" C N R 44 C "O4'" O N N 45 C "C3'" C N S 46 C "O3'" O N N 47 C "C2'" C N R 48 C "O2'" O N N 49 C "C1'" C N R 50 C N1 N N N 51 C C2 C N N 52 C O2 O N N 53 C N3 N N N 54 C C4 C N N 55 C N4 N N N 56 C C5 C N N 57 C C6 C N N 58 C HOP3 H N N 59 C HOP2 H N N 60 C "H5'" H N N 61 C "H5''" H N N 62 C "H4'" H N N 63 C "H3'" H N N 64 C "HO3'" H N N 65 C "H2'" H N N 66 C "HO2'" H N N 67 C "H1'" H N N 68 C H41 H N N 69 C H42 H N N 70 C H5 H N N 71 C H6 H N N 72 G OP3 O N N 73 G P P N N 74 G OP1 O N N 75 G OP2 O N N 76 G "O5'" O N N 77 G "C5'" C N N 78 G "C4'" C N R 79 G "O4'" O N N 80 G "C3'" C N S 81 G "O3'" O N N 82 G "C2'" C N R 83 G "O2'" O N N 84 G "C1'" C N R 85 G N9 N Y N 86 G C8 C Y N 87 G N7 N Y N 88 G C5 C Y N 89 G C6 C N N 90 G O6 O N N 91 G N1 N N N 92 G C2 C N N 93 G N2 N N N 94 G N3 N N N 95 G C4 C Y N 96 G HOP3 H N N 97 G HOP2 H N N 98 G "H5'" H N N 99 G "H5''" H N N 100 G "H4'" H N N 101 G "H3'" H N N 102 G "HO3'" H N N 103 G "H2'" H N N 104 G "HO2'" H N N 105 G "H1'" H N N 106 G H8 H N N 107 G H1 H N N 108 G H21 H N N 109 G H22 H N N 110 U OP3 O N N 111 U P P N N 112 U OP1 O N N 113 U OP2 O N N 114 U "O5'" O N N 115 U "C5'" C N N 116 U "C4'" C N R 117 U "O4'" O N N 118 U "C3'" C N S 119 U "O3'" O N N 120 U "C2'" C N R 121 U "O2'" O N N 122 U "C1'" C N R 123 U N1 N N N 124 U C2 C N N 125 U O2 O N N 126 U N3 N N N 127 U C4 C N N 128 U O4 O N N 129 U C5 C N N 130 U C6 C N N 131 U HOP3 H N N 132 U HOP2 H N N 133 U "H5'" H N N 134 U "H5''" H N N 135 U "H4'" H N N 136 U "H3'" H N N 137 U "HO3'" H N N 138 U "H2'" H N N 139 U "HO2'" H N N 140 U "H1'" H N N 141 U H3 H N N 142 U H5 H N N 143 U H6 H N N 144 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A OP3 P sing N N 1 A OP3 HOP3 sing N N 2 A P OP1 doub N N 3 A P OP2 sing N N 4 A P "O5'" sing N N 5 A OP2 HOP2 sing N N 6 A "O5'" "C5'" sing N N 7 A "C5'" "C4'" sing N N 8 A "C5'" "H5'" sing N N 9 A "C5'" "H5''" sing N N 10 A "C4'" "O4'" sing N N 11 A "C4'" "C3'" sing N N 12 A "C4'" "H4'" sing N N 13 A "O4'" "C1'" sing N N 14 A "C3'" "O3'" sing N N 15 A "C3'" "C2'" sing N N 16 A "C3'" "H3'" sing N N 17 A "O3'" "HO3'" sing N N 18 A "C2'" "O2'" sing N N 19 A "C2'" "C1'" sing N N 20 A "C2'" "H2'" sing N N 21 A "O2'" "HO2'" sing N N 22 A "C1'" N9 sing N N 23 A "C1'" "H1'" sing N N 24 A N9 C8 sing Y N 25 A N9 C4 sing Y N 26 A C8 N7 doub Y N 27 A C8 H8 sing N N 28 A N7 C5 sing Y N 29 A C5 C6 sing Y N 30 A C5 C4 doub Y N 31 A C6 N6 sing N N 32 A C6 N1 doub Y N 33 A N6 H61 sing N N 34 A N6 H62 sing N N 35 A N1 C2 sing Y N 36 A C2 N3 doub Y N 37 A C2 H2 sing N N 38 A N3 C4 sing Y N 39 C OP3 P sing N N 40 C OP3 HOP3 sing N N 41 C P OP1 doub N N 42 C P OP2 sing N N 43 C P "O5'" sing N N 44 C OP2 HOP2 sing N N 45 C "O5'" "C5'" sing N N 46 C "C5'" "C4'" sing N N 47 C "C5'" "H5'" sing N N 48 C "C5'" "H5''" sing N N 49 C "C4'" "O4'" sing N N 50 C "C4'" "C3'" sing N N 51 C "C4'" "H4'" sing N N 52 C "O4'" "C1'" sing N N 53 C "C3'" "O3'" sing N N 54 C "C3'" "C2'" sing N N 55 C "C3'" "H3'" sing N N 56 C "O3'" "HO3'" sing N N 57 C "C2'" "O2'" sing N N 58 C "C2'" "C1'" sing N N 59 C "C2'" "H2'" sing N N 60 C "O2'" "HO2'" sing N N 61 C "C1'" N1 sing N N 62 C "C1'" "H1'" sing N N 63 C N1 C2 sing N N 64 C N1 C6 sing N N 65 C C2 O2 doub N N 66 C C2 N3 sing N N 67 C N3 C4 doub N N 68 C C4 N4 sing N N 69 C C4 C5 sing N N 70 C N4 H41 sing N N 71 C N4 H42 sing N N 72 C C5 C6 doub N N 73 C C5 H5 sing N N 74 C C6 H6 sing N N 75 G OP3 P sing N N 76 G OP3 HOP3 sing N N 77 G P OP1 doub N N 78 G P OP2 sing N N 79 G P "O5'" sing N N 80 G OP2 HOP2 sing N N 81 G "O5'" "C5'" sing N N 82 G "C5'" "C4'" sing N N 83 G "C5'" "H5'" sing N N 84 G "C5'" "H5''" sing N N 85 G "C4'" "O4'" sing N N 86 G "C4'" "C3'" sing N N 87 G "C4'" "H4'" sing N N 88 G "O4'" "C1'" sing N N 89 G "C3'" "O3'" sing N N 90 G "C3'" "C2'" sing N N 91 G "C3'" "H3'" sing N N 92 G "O3'" "HO3'" sing N N 93 G "C2'" "O2'" sing N N 94 G "C2'" "C1'" sing N N 95 G "C2'" "H2'" sing N N 96 G "O2'" "HO2'" sing N N 97 G "C1'" N9 sing N N 98 G "C1'" "H1'" sing N N 99 G N9 C8 sing Y N 100 G N9 C4 sing Y N 101 G C8 N7 doub Y N 102 G C8 H8 sing N N 103 G N7 C5 sing Y N 104 G C5 C6 sing N N 105 G C5 C4 doub Y N 106 G C6 O6 doub N N 107 G C6 N1 sing N N 108 G N1 C2 sing N N 109 G N1 H1 sing N N 110 G C2 N2 sing N N 111 G C2 N3 doub N N 112 G N2 H21 sing N N 113 G N2 H22 sing N N 114 G N3 C4 sing N N 115 U OP3 P sing N N 116 U OP3 HOP3 sing N N 117 U P OP1 doub N N 118 U P OP2 sing N N 119 U P "O5'" sing N N 120 U OP2 HOP2 sing N N 121 U "O5'" "C5'" sing N N 122 U "C5'" "C4'" sing N N 123 U "C5'" "H5'" sing N N 124 U "C5'" "H5''" sing N N 125 U "C4'" "O4'" sing N N 126 U "C4'" "C3'" sing N N 127 U "C4'" "H4'" sing N N 128 U "O4'" "C1'" sing N N 129 U "C3'" "O3'" sing N N 130 U "C3'" "C2'" sing N N 131 U "C3'" "H3'" sing N N 132 U "O3'" "HO3'" sing N N 133 U "C2'" "O2'" sing N N 134 U "C2'" "C1'" sing N N 135 U "C2'" "H2'" sing N N 136 U "O2'" "HO2'" sing N N 137 U "C1'" N1 sing N N 138 U "C1'" "H1'" sing N N 139 U N1 C2 sing N N 140 U N1 C6 sing N N 141 U C2 O2 doub N N 142 U C2 N3 sing N N 143 U N3 C4 sing N N 144 U N3 H3 sing N N 145 U C4 O4 doub N N 146 U C4 C5 sing N N 147 U C5 C6 doub N N 148 U C5 H5 sing N N 149 U C6 H6 sing N N 150 # _em_admin.current_status REL _em_admin.deposition_date 2024-10-31 _em_admin.deposition_site RCSB _em_admin.entry_id 9E73 _em_admin.last_update 2025-12-03 _em_admin.map_release_date 2025-11-05 _em_admin.title 'Cryo-EM structure of RaiA RNA from Clostridium acetobutylicum' # _em_ctf_correction.details ? _em_ctf_correction.em_image_processing_id 1 _em_ctf_correction.id 1 _em_ctf_correction.type 'PHASE FLIPPING AND AMPLITUDE CORRECTION' # _em_entity_assembly_naturalsource.cell ? _em_entity_assembly_naturalsource.cellular_location ? _em_entity_assembly_naturalsource.entity_assembly_id 1 _em_entity_assembly_naturalsource.id 2 _em_entity_assembly_naturalsource.ncbi_tax_id 272562 _em_entity_assembly_naturalsource.organism 'Clostridium acetobutylicum ATCC 824' _em_entity_assembly_naturalsource.organelle ? _em_entity_assembly_naturalsource.organ ? _em_entity_assembly_naturalsource.strain ? _em_entity_assembly_naturalsource.tissue ? _em_entity_assembly_naturalsource.details ? # _em_image_processing.details ? _em_image_processing.id 1 _em_image_processing.image_recording_id 1 # _em_image_recording.average_exposure_time ? _em_image_recording.avg_electron_dose_per_subtomogram ? _em_image_recording.avg_electron_dose_per_image 50 _em_image_recording.details ? _em_image_recording.detector_mode ? _em_image_recording.film_or_detector_model 'GATAN K3 (6k x 4k)' _em_image_recording.id 1 _em_image_recording.imaging_id 1 _em_image_recording.num_diffraction_images ? _em_image_recording.num_grids_imaged ? _em_image_recording.num_real_images ? # loop_ _em_software.category _em_software.details _em_software.id _em_software.image_processing_id _em_software.fitting_id _em_software.imaging_id _em_software.name _em_software.version _em_software.reference_DOI 'PARTICLE SELECTION' ? 1 1 ? ? Topaz ? ? 'IMAGE ACQUISITION' ? 2 ? ? 1 ? ? ? MASKING ? 3 ? ? ? ? ? ? 'CTF CORRECTION' ? 4 1 ? ? ? ? ? 'LAYERLINE INDEXING' ? 5 ? ? ? ? ? ? 'DIFFRACTION INDEXING' ? 6 ? ? ? ? ? ? 'MODEL FITTING' ? 7 ? ? ? ? ? ? 'MODEL REFINEMENT' ? 8 ? ? ? PHENIX ? ? OTHER ? 9 ? ? ? ? ? ? 'INITIAL EULER ASSIGNMENT' ? 10 1 ? ? ? ? ? 'FINAL EULER ASSIGNMENT' ? 11 1 ? ? ? ? ? CLASSIFICATION ? 12 1 ? ? ? ? ? RECONSTRUCTION ? 13 1 ? ? cryoSPARC ? ? 'VOLUME SELECTION' ? 14 1 1 1 ? ? ? 'SERIES ALIGNMENT' ? 15 1 1 1 ? ? ? 'MOLECULAR REPLACEMENT' ? 16 1 1 1 ? ? ? 'LATTICE DISTORTION CORRECTION' ? 17 1 1 1 ? ? ? 'SYMMETRY DETERMINATION' ? 18 1 1 1 ? ? ? 'CRYSTALLOGRAPHY MERGING' ? 19 1 1 1 ? ? ? # _em_specimen.concentration ? _em_specimen.details ? _em_specimen.embedding_applied NO _em_specimen.experiment_id 1 _em_specimen.id 1 _em_specimen.shadowing_applied NO _em_specimen.staining_applied NO _em_specimen.vitrification_applied YES # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 9E73 'double helix' 9E73 'a-form double helix' 9E73 'hairpin loop' 9E73 'bulge loop' 9E73 'mismatched base pair' 9E73 'triple helix' 9E73 'three-way junction' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A U 1 1_555 A A 204 1_555 -0.054 -0.062 0.442 -8.678 -2.109 1.255 1 A_U1:A204_A A 1 ? A 204 ? 20 1 1 A U 2 1_555 A A 203 1_555 -0.132 -0.126 0.614 -6.987 2.604 2.504 2 A_U2:A203_A A 2 ? A 203 ? 20 1 1 A A 3 1_555 A U 202 1_555 -0.008 -0.189 0.669 -1.919 3.556 -0.991 3 A_A3:U202_A A 3 ? A 202 ? 20 1 1 A A 4 1_555 A U 201 1_555 0.077 -0.175 0.761 0.297 1.082 -0.223 4 A_A4:U201_A A 4 ? A 201 ? 20 1 1 A G 5 1_555 A C 200 1_555 -0.191 -0.254 0.752 -0.920 -0.002 0.308 5 A_G5:C200_A A 5 ? A 200 ? 19 1 1 A U 6 1_555 A A 199 1_555 -0.067 -0.168 0.873 2.067 1.904 -1.494 6 A_U6:A199_A A 6 ? A 199 ? 20 1 1 A U 7 1_555 A A 198 1_555 -0.113 -0.152 0.861 0.462 2.057 -1.658 7 A_U7:A198_A A 7 ? A 198 ? 20 1 1 A A 8 1_555 A U 197 1_555 0.091 -0.136 0.679 3.460 0.187 -1.636 8 A_A8:U197_A A 8 ? A 197 ? 20 1 1 A G 9 1_555 A C 196 1_555 -0.140 -0.207 0.769 6.140 -3.064 -1.618 9 A_G9:C196_A A 9 ? A 196 ? 19 1 1 A U 12 1_555 A A 195 1_555 -0.050 -0.084 0.091 2.526 -0.198 3.068 10 A_U12:A195_A A 12 ? A 195 ? 20 1 1 A U 13 1_555 A A 194 1_555 -0.160 -0.053 0.209 2.663 0.746 -3.056 11 A_U13:A194_A A 13 ? A 194 ? 20 1 1 A G 14 1_555 A C 193 1_555 -0.234 -0.132 0.383 8.464 3.238 1.785 12 A_G14:C193_A A 14 ? A 193 ? 19 1 1 A U 15 1_555 A A 189 1_555 -0.021 -0.081 -0.324 -3.791 -5.218 1.057 13 A_U15:A189_A A 15 ? A 189 ? 20 1 1 A G 16 1_555 A C 188 1_555 -0.214 -0.097 0.187 -3.185 0.205 0.599 14 A_G16:C188_A A 16 ? A 188 ? 19 1 1 A G 17 1_555 A C 187 1_555 -0.205 -0.210 0.499 -1.992 -3.064 -1.279 15 A_G17:C187_A A 17 ? A 187 ? 19 1 1 A U 18 1_555 A A 186 1_555 -0.099 -0.081 0.379 -1.713 -2.467 -3.767 16 A_U18:A186_A A 18 ? A 186 ? 20 1 1 A U 19 1_555 A A 23 1_555 4.606 -1.423 -0.182 -0.660 11.628 -105.786 17 A_U19:A23_A A 19 ? A 23 ? 24 4 1 A G 20 1_555 A A 183 1_555 6.794 -3.865 -0.005 14.195 12.522 -2.531 18 A_G20:A183_A A 20 ? A 183 ? 11 10 1 A G 24 1_555 A U 50 1_555 -2.577 -0.396 0.258 -1.835 -8.427 1.667 19 A_G24:U50_A A 24 ? A 50 ? 28 1 1 A U 25 1_555 A A 49 1_555 -0.083 -0.049 0.220 -4.439 -8.380 1.261 20 A_U25:A49_A A 25 ? A 49 ? 20 1 1 A C 26 1_555 A G 48 1_555 0.206 -0.179 0.325 -3.129 -6.980 -1.285 21 A_C26:G48_A A 26 ? A 48 ? 19 1 1 A G 27 1_555 A C 47 1_555 -0.125 -0.158 0.584 7.358 -3.368 -2.272 22 A_G27:C47_A A 27 ? A 47 ? 19 1 1 A A 28 1_555 A A 45 1_555 -3.914 0.991 1.823 -6.380 15.519 -103.660 23 A_A28:A45_A A 28 ? A 45 ? 5 4 1 A G 30 1_555 A C 42 1_555 -0.222 -0.126 -0.063 -6.991 -0.658 -0.119 24 A_G30:C42_A A 30 ? A 42 ? 19 1 1 A C 31 1_555 A G 41 1_555 0.183 -0.127 -0.048 -2.457 2.033 -0.512 25 A_C31:G41_A A 31 ? A 41 ? 19 1 1 A C 32 1_555 A G 40 1_555 0.207 -0.106 0.011 0.396 1.408 0.413 26 A_C32:G40_A A 32 ? A 40 ? 19 1 1 A U 85 1_555 A A 39 1_555 -0.067 -0.043 -0.155 1.960 2.309 2.427 27 A_U85:A39_A A 85 ? A 39 ? 20 1 1 A G 86 1_555 A C 38 1_555 -0.169 -0.135 0.165 0.951 -3.271 -1.809 28 A_G86:C38_A A 86 ? A 38 ? 19 1 1 A C 87 1_555 A G 37 1_555 0.192 -0.121 0.067 4.051 -1.238 -1.532 29 A_C87:G37_A A 87 ? A 37 ? 19 1 1 A G 88 1_555 A C 36 1_555 -0.178 -0.130 0.292 2.527 -10.564 0.037 30 A_G88:C36_A A 88 ? A 36 ? 19 1 1 A G 89 1_555 A U 35 1_555 -2.709 -0.378 0.063 0.919 -0.545 3.646 31 A_G89:U35_A A 89 ? A 35 ? 28 1 1 A C 90 1_555 A G 34 1_555 0.210 -0.137 -0.297 5.443 0.563 -1.373 32 A_C90:G34_A A 90 ? A 34 ? 19 1 1 A A 68 1_555 A C 65 1_555 -3.036 -1.212 1.233 -14.318 0.417 -77.925 33 A_A68:C65_A A 68 ? A 65 ? 25 4 1 A U 71 1_555 A A 64 1_555 -0.383 -0.456 1.549 9.158 -12.228 -22.103 34 A_U71:A64_A A 71 ? A 64 ? 20 1 1 A U 72 1_555 A A 63 1_555 -0.127 0.097 1.492 3.963 -11.969 6.198 35 A_U72:A63_A A 72 ? A 63 ? 20 1 1 A U 73 1_555 A A 62 1_555 -0.179 -0.161 0.767 0.847 -1.703 -1.429 36 A_U73:A62_A A 73 ? A 62 ? 20 1 1 A A 74 1_555 A U 61 1_555 0.005 -0.113 0.194 1.515 -2.643 1.269 37 A_A74:U61_A A 74 ? A 61 ? 20 1 1 A A 75 1_555 A U 60 1_555 0.055 -0.070 -0.076 6.156 -3.812 1.469 38 A_A75:U60_A A 75 ? A 60 ? 20 1 1 A U 76 1_555 A G 59 1_555 2.757 -0.469 -0.366 5.525 -8.318 4.659 39 A_U76:G59_A A 76 ? A 59 ? 28 1 1 A G 77 1_555 A A 58 1_555 6.783 -4.119 -0.198 -4.004 -9.137 -3.659 40 A_G77:A58_A A 77 ? A 58 ? 11 10 1 A A 78 1_555 A U 56 1_555 -4.301 -2.065 -0.257 6.436 -2.467 -96.081 41 A_A78:U56_A A 78 ? A 56 ? 24 4 1 A G 79 1_555 A G 55 1_555 -1.603 -0.985 0.344 24.728 -12.585 179.488 42 A_G79:G55_A A 79 ? A 55 ? 3 2 1 A G 174 1_555 A C 54 1_555 -0.224 -0.121 0.099 1.198 -7.467 1.114 43 A_G174:C54_A A 174 ? A 54 ? 19 1 1 A U 175 1_555 A A 53 1_555 -0.029 -0.062 -0.028 2.674 -7.285 1.039 44 A_U175:A53_A A 175 ? A 53 ? 20 1 1 A G 176 1_555 A C 52 1_555 -0.221 -0.134 0.213 -1.478 -0.824 0.724 45 A_G176:C52_A A 176 ? A 52 ? 19 1 1 A G 177 1_555 A C 51 1_555 -0.177 -0.117 0.174 -1.642 2.176 -0.049 46 A_G177:C51_A A 177 ? A 51 ? 19 1 1 A G 178 1_555 A A 81 1_555 8.127 -4.708 0.001 2.071 11.454 -61.356 47 A_G178:A81_A A 178 ? A 81 ? ? ? 1 A G 179 1_555 A A 184 1_555 3.649 -3.663 -0.136 8.223 13.819 -67.688 48 A_G179:A184_A A 179 ? A 184 ? 10 6 1 A A 182 1_555 A U 82 1_555 -0.361 0.400 -0.481 -23.314 4.302 10.664 49 A_A182:U82_A A 182 ? A 82 ? 20 1 1 A C 181 1_555 A G 83 1_555 0.216 -0.120 -0.017 -7.509 1.765 -2.488 50 A_C181:G83_A A 181 ? A 83 ? 19 1 1 A A 121 1_555 A G 170 1_555 -6.795 -3.733 -0.448 9.523 1.252 -0.686 51 A_A121:G170_A A 121 ? A 170 ? 11 9 1 A G 101 1_555 A C 169 1_555 -0.248 -0.186 -0.493 7.761 -3.970 4.061 52 A_G101:C169_A A 101 ? A 169 ? 19 1 1 A C 103 1_555 A G 168 1_555 0.179 -0.120 0.542 -4.195 -3.176 1.118 53 A_C103:G168_A A 103 ? A 168 ? 19 1 1 A C 104 1_555 A G 167 1_555 0.186 -0.119 0.311 -4.127 -1.670 0.249 54 A_C104:G167_A A 104 ? A 167 ? 19 1 1 A U 105 1_555 A A 166 1_555 -0.041 -0.120 0.462 1.090 -2.021 -3.132 55 A_U105:A166_A A 105 ? A 166 ? 20 1 1 A G 106 1_555 A C 165 1_555 -0.172 -0.122 0.476 4.889 3.213 -1.020 56 A_G106:C165_A A 106 ? A 165 ? 19 1 1 A C 107 1_555 A G 164 1_555 0.175 -0.155 -0.253 3.028 9.037 0.617 57 A_C107:G164_A A 107 ? A 164 ? 19 1 1 A C 108 1_555 A G 118 1_555 0.207 -0.117 -0.312 -1.425 -3.923 1.127 58 A_C108:G118_A A 108 ? A 118 ? 19 1 1 A G 109 1_555 A C 117 1_555 -0.216 -0.143 -0.293 -5.578 -0.024 -1.385 59 A_G109:C117_A A 109 ? A 117 ? 19 1 1 A C 110 1_555 A G 116 1_555 0.210 -0.129 -0.097 0.309 3.715 0.662 60 A_C110:G116_A A 110 ? A 116 ? 19 1 1 A U 111 1_555 A G 115 1_555 2.794 -0.530 -0.046 3.020 3.463 1.353 61 A_U111:G115_A A 111 ? A 115 ? 28 1 1 A G 94 1_555 A U 173 1_555 -0.810 7.653 1.061 6.166 -10.760 162.368 62 A_G94:U173_A A 94 ? A 173 ? ? 11 1 A G 120 1_555 A C 162 1_555 -0.212 -0.094 -0.090 1.721 0.147 2.144 63 A_G120:C162_A A 120 ? A 162 ? 19 1 1 A G 122 1_555 A C 161 1_555 -0.197 -0.115 0.091 2.824 1.418 -0.593 64 A_G122:C161_A A 122 ? A 161 ? 19 1 1 A U 123 1_555 A U 160 1_555 -2.594 -1.370 0.128 -0.029 -2.748 6.261 65 A_U123:U160_A A 123 ? A 160 ? 16 1 1 A A 124 1_555 A U 159 1_555 0.012 -0.086 -0.321 -0.339 1.965 1.037 66 A_A124:U159_A A 124 ? A 159 ? 20 1 1 A U 125 1_555 A C 158 1_555 4.432 -1.294 -0.674 5.597 5.043 -5.307 67 A_U125:C158_A A 125 ? A 158 ? ? ? 1 A U 126 1_555 A A 157 1_555 6.795 -4.380 -0.628 9.842 -1.747 -11.817 68 A_U126:A157_A A 126 ? A 157 ? ? 6 1 A A 127 1_555 A A 156 1_555 -6.044 5.544 0.091 -9.215 6.025 -173.175 69 A_A127:A156_A A 127 ? A 156 ? 2 8 1 A U 129 1_555 A A 155 1_555 4.104 -1.821 0.272 2.819 -4.799 -100.525 70 A_U129:A155_A A 129 ? A 155 ? 24 4 1 A A 130 1_555 A G 154 1_555 -6.736 -4.130 -0.283 -3.048 -4.171 -2.079 71 A_A130:G154_A A 130 ? A 154 ? 11 10 1 A G 131 1_555 A C 153 1_555 -0.201 -0.122 -0.188 -1.128 -2.953 -0.634 72 A_G131:C153_A A 131 ? A 153 ? 19 1 1 A U 132 1_555 A G 152 1_555 2.271 -0.413 -0.081 1.017 -2.355 -4.256 73 A_U132:G152_A A 132 ? A 152 ? 28 1 1 A G 133 1_555 A A 151 1_555 6.744 -4.324 -0.179 3.369 -3.764 -2.687 74 A_G133:A151_A A 133 ? A 151 ? 11 10 1 A A 134 1_555 A U 150 1_555 -4.301 -1.980 -0.157 -2.886 -9.103 -101.218 75 A_A134:U150_A A 134 ? A 150 ? 24 4 1 A G 135 1_555 A G 148 1_555 -5.101 0.524 -0.064 -16.322 1.680 -111.832 76 A_G135:G148_A A 135 ? A 148 ? 7 4 1 A A 136 1_555 A G 147 1_555 -6.671 -3.781 -0.654 -8.974 -2.881 1.750 77 A_A136:G147_A A 136 ? A 147 ? 11 9 1 A G 137 1_555 A C 146 1_555 -0.175 -0.162 -0.329 -5.513 5.913 -0.178 78 A_G137:C146_A A 137 ? A 146 ? 19 1 1 A G 138 1_555 A C 145 1_555 -0.181 -0.136 -0.216 -3.843 11.974 -1.887 79 A_G138:C145_A A 138 ? A 145 ? 19 1 1 A G 139 1_555 A U 144 1_555 4.511 0.415 0.352 4.664 20.696 -51.533 80 A_G139:U144_A A 139 ? A 144 ? ? 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A U 1 1_555 A A 204 1_555 A U 2 1_555 A A 203 1_555 -0.339 -0.819 4.129 -3.928 3.527 30.225 -2.419 -0.329 4.021 6.700 7.461 30.672 1 AA_U1U2:A203A204_AA A 1 ? A 204 ? A 2 ? A 203 ? 1 A U 2 1_555 A A 203 1_555 A A 3 1_555 A U 202 1_555 -0.461 -1.465 3.397 -3.303 7.272 31.931 -3.828 0.251 3.031 12.967 5.890 32.890 2 AA_U2A3:U202A203_AA A 2 ? A 203 ? A 3 ? A 202 ? 1 A A 3 1_555 A U 202 1_555 A A 4 1_555 A U 201 1_555 0.170 -1.935 3.011 -1.282 7.286 32.353 -4.438 -0.482 2.519 12.867 2.264 33.166 3 AA_A3A4:U201U202_AA A 3 ? A 202 ? A 4 ? A 201 ? 1 A A 4 1_555 A U 201 1_555 A G 5 1_555 A C 200 1_555 -0.130 -2.178 3.123 -1.090 3.020 31.022 -4.583 0.049 2.906 5.628 2.031 31.184 4 AA_A4G5:C200U201_AA A 4 ? A 201 ? A 5 ? A 200 ? 1 A G 5 1_555 A C 200 1_555 A U 6 1_555 A A 199 1_555 -0.125 -1.952 3.099 -0.728 1.099 32.314 -3.686 0.104 3.035 1.974 1.308 32.341 5 AA_G5U6:A199C200_AA A 5 ? A 200 ? A 6 ? A 199 ? 1 A U 6 1_555 A A 199 1_555 A U 7 1_555 A A 198 1_555 -0.212 -1.765 3.195 0.768 4.655 33.687 -3.716 0.477 2.927 7.984 -1.318 34.006 6 AA_U6U7:A198A199_AA A 6 ? A 199 ? A 7 ? A 198 ? 1 A U 7 1_555 A A 198 1_555 A A 8 1_555 A U 197 1_555 -0.088 -1.737 2.801 1.232 5.020 34.052 -3.573 0.306 2.522 8.511 -2.089 34.431 7 AA_U7A8:U197A198_AA A 7 ? A 198 ? A 8 ? A 197 ? 1 A A 8 1_555 A U 197 1_555 A G 9 1_555 A C 196 1_555 0.234 -1.523 3.204 0.262 4.069 31.365 -3.510 -0.383 2.990 7.486 -0.483 31.622 8 AA_A8G9:C196U197_AA A 8 ? A 197 ? A 9 ? A 196 ? 1 A G 9 1_555 A C 196 1_555 A U 12 1_555 A A 195 1_555 -2.058 -1.690 3.152 0.945 4.478 53.014 -2.154 2.354 2.976 5.006 -1.056 53.197 9 AA_G9U12:A195C196_AA A 9 ? A 196 ? A 12 ? A 195 ? 1 A U 12 1_555 A A 195 1_555 A U 13 1_555 A A 194 1_555 0.296 -2.221 3.434 2.913 0.076 23.303 -5.486 0.310 3.437 0.188 -7.176 23.482 10 AA_U12U13:A194A195_AA A 12 ? A 195 ? A 13 ? A 194 ? 1 A U 13 1_555 A A 194 1_555 A G 14 1_555 A C 193 1_555 -0.521 -2.046 3.138 -0.534 10.789 30.717 -5.274 0.851 2.314 19.622 0.971 32.518 11 AA_U13G14:C193A194_AA A 13 ? A 194 ? A 14 ? A 193 ? 1 A U 15 1_555 A A 189 1_555 A G 16 1_555 A C 188 1_555 0.197 -1.637 3.397 -2.172 7.145 29.508 -4.520 -0.802 2.908 13.752 4.181 30.417 12 AA_U15G16:C188A189_AA A 15 ? A 189 ? A 16 ? A 188 ? 1 A G 16 1_555 A C 188 1_555 A G 17 1_555 A C 187 1_555 0.777 -2.272 3.162 -0.460 6.363 26.543 -6.220 -1.748 2.545 13.610 0.984 27.285 13 AA_G16G17:C187C188_AA A 16 ? A 188 ? A 17 ? A 187 ? 1 A G 17 1_555 A C 187 1_555 A U 18 1_555 A A 186 1_555 -0.197 -1.937 3.170 1.339 2.619 36.187 -3.456 0.494 3.019 4.208 -2.152 36.302 14 AA_G17U18:A186C187_AA A 17 ? A 187 ? A 18 ? A 186 ? 1 A U 18 1_555 A A 186 1_555 A U 19 1_555 A A 23 1_555 -2.976 -1.977 3.343 12.297 1.082 82.852 -1.508 2.517 2.939 0.813 -9.247 83.602 15 AA_U18U19:A23A186_AA A 18 ? A 186 ? A 19 ? A 23 ? 1 A U 19 1_555 A A 23 1_555 A G 20 1_555 A A 183 1_555 2.129 -0.225 3.372 -2.231 1.837 -10.018 -2.267 7.460 3.735 -10.245 -12.440 -10.426 16 AA_U19G20:A183A23_AA A 19 ? A 23 ? A 20 ? A 183 ? 1 A G 24 1_555 A U 50 1_555 A U 25 1_555 A A 49 1_555 -0.517 -1.506 3.596 -3.867 4.640 43.868 -2.467 0.296 3.458 6.175 5.147 44.262 17 AA_G24U25:A49U50_AA A 24 ? A 50 ? A 25 ? A 49 ? 1 A U 25 1_555 A A 49 1_555 A C 26 1_555 A G 48 1_555 -0.006 -1.019 3.385 0.620 5.714 36.594 -2.381 0.094 3.195 9.031 -0.980 37.028 18 AA_U25C26:G48A49_AA A 25 ? A 49 ? A 26 ? A 48 ? 1 A C 26 1_555 A G 48 1_555 A G 27 1_555 A C 47 1_555 -1.339 -1.780 2.985 -2.071 12.821 19.332 -7.829 2.772 1.633 33.696 5.442 23.255 19 AA_C26G27:C47G48_AA A 26 ? A 48 ? A 27 ? A 47 ? 1 A G 27 1_555 A C 47 1_555 A A 28 1_555 A A 45 1_555 -3.392 3.129 5.055 13.913 4.010 30.530 4.488 8.995 3.586 7.133 -24.749 33.716 20 AA_G27A28:A45C47_AA A 27 ? A 47 ? A 28 ? A 45 ? 1 A A 28 1_555 A A 45 1_555 A G 30 1_555 A C 42 1_555 -2.304 2.327 2.465 -13.793 -147.114 53.529 1.745 1.138 -0.715 -82.224 7.709 151.292 21 AA_A28G30:C42A45_AA A 28 ? A 45 ? A 30 ? A 42 ? 1 A C 31 1_555 A G 41 1_555 A C 32 1_555 A G 40 1_555 0.306 -1.980 3.417 0.615 5.110 29.279 -4.926 -0.468 3.040 10.012 -1.205 29.718 22 AA_C31C32:G40G41_AA A 31 ? A 41 ? A 32 ? A 40 ? 1 A C 32 1_555 A G 40 1_555 A U 85 1_555 A A 39 1_555 -2.548 -1.260 3.495 0.696 5.683 44.856 -2.167 3.380 3.282 7.411 -0.908 45.201 23 AA_C32U85:A39G40_AA A 32 ? A 40 ? A 85 ? A 39 ? 1 A U 85 1_555 A A 39 1_555 A G 86 1_555 A C 38 1_555 -0.882 -1.892 3.234 -2.586 18.624 33.117 -4.952 1.073 1.990 29.869 4.147 37.952 24 AA_U85G86:C38A39_AA A 85 ? A 39 ? A 86 ? A 38 ? 1 A G 86 1_555 A C 38 1_555 A C 87 1_555 A G 37 1_555 -0.387 -1.266 3.496 -0.327 6.464 31.279 -3.512 0.642 3.181 11.830 0.598 31.926 25 AA_G86C87:G37C38_AA A 86 ? A 38 ? A 87 ? A 37 ? 1 A C 87 1_555 A G 37 1_555 A G 88 1_555 A C 36 1_555 0.545 -1.838 3.237 -0.697 8.553 29.558 -4.993 -1.153 2.602 16.336 1.331 30.752 26 AA_C87G88:C36G37_AA A 87 ? A 37 ? A 88 ? A 36 ? 1 A G 88 1_555 A C 36 1_555 A G 89 1_555 A U 35 1_555 0.342 -2.017 3.048 -3.080 12.920 25.998 -6.229 -1.209 1.811 26.622 6.347 29.142 27 AA_G88G89:U35C36_AA A 88 ? A 36 ? A 89 ? A 35 ? 1 A G 89 1_555 A U 35 1_555 A C 90 1_555 A G 34 1_555 -0.140 -1.283 3.416 0.547 5.552 46.020 -2.111 0.225 3.247 7.070 -0.697 46.339 28 AA_G89C90:G34U35_AA A 89 ? A 35 ? A 90 ? A 34 ? 1 A A 68 1_555 A C 65 1_555 A U 71 1_555 A A 64 1_555 2.314 -3.554 4.439 27.886 -2.643 64.039 -2.978 -0.476 5.093 -2.377 -25.082 69.295 29 AA_A68U71:A64C65_AA A 68 ? A 65 ? A 71 ? A 64 ? 1 A U 71 1_555 A A 64 1_555 A U 72 1_555 A A 63 1_555 0.690 -2.018 3.369 -2.092 0.157 31.617 -3.725 -1.658 3.308 0.288 3.834 31.684 30 AA_U71U72:A63A64_AA A 71 ? A 64 ? A 72 ? A 63 ? 1 A U 72 1_555 A A 63 1_555 A U 73 1_555 A A 62 1_555 -1.217 -1.602 3.143 0.344 2.828 36.044 -2.956 2.007 3.002 4.561 -0.554 36.153 31 AA_U72U73:A62A63_AA A 72 ? A 63 ? A 73 ? A 62 ? 1 A U 73 1_555 A A 62 1_555 A A 74 1_555 A U 61 1_555 -0.121 -1.606 3.008 1.328 8.359 30.667 -4.242 0.429 2.487 15.439 -2.454 31.786 32 AA_U73A74:U61A62_AA A 73 ? A 62 ? A 74 ? A 61 ? 1 A A 74 1_555 A U 61 1_555 A A 75 1_555 A U 60 1_555 -0.059 -1.410 3.198 1.120 5.643 32.553 -3.378 0.282 2.915 9.970 -1.979 33.044 33 AA_A74A75:U60U61_AA A 74 ? A 61 ? A 75 ? A 60 ? 1 A A 75 1_555 A U 60 1_555 A U 76 1_555 A G 59 1_555 0.583 -1.248 3.481 4.273 3.514 42.554 -2.076 -0.348 3.413 4.817 -5.858 42.896 34 AA_A75U76:G59U60_AA A 75 ? A 60 ? A 76 ? A 59 ? 1 A U 76 1_555 A G 59 1_555 A G 77 1_555 A A 58 1_555 -0.822 -0.990 3.971 5.706 3.156 53.361 -1.330 1.335 3.811 3.500 -6.327 53.729 35 AA_U76G77:A58G59_AA A 76 ? A 59 ? A 77 ? A 58 ? 1 A G 77 1_555 A A 58 1_555 A A 78 1_555 A U 56 1_555 -2.587 -0.707 6.066 -3.469 32.622 20.731 -8.422 3.126 2.937 58.237 6.194 38.655 36 AA_G77A78:U56A58_AA A 77 ? A 58 ? A 78 ? A 56 ? 1 A A 78 1_555 A U 56 1_555 A G 79 1_555 A G 55 1_555 2.172 -3.922 0.461 -173.077 20.151 -29.502 1.825 -0.102 2.642 -10.324 -88.668 -174.436 37 AA_A78G79:G55U56_AA A 78 ? A 56 ? A 79 ? A 55 ? 1 A G 79 1_555 A G 55 1_555 A G 174 1_555 A C 54 1_555 -2.098 -3.141 -1.149 75.574 -142.386 54.474 -1.613 1.047 1.056 -75.669 -40.163 163.300 38 AA_G79G174:C54G55_AA A 79 ? A 55 ? A 174 ? A 54 ? 1 A G 174 1_555 A C 54 1_555 A U 175 1_555 A A 53 1_555 -0.364 -1.651 3.402 1.546 2.664 32.745 -3.379 0.912 3.241 4.712 -2.734 32.885 39 AA_G174U175:A53C54_AA A 174 ? A 54 ? A 175 ? A 53 ? 1 A U 175 1_555 A A 53 1_555 A G 176 1_555 A C 52 1_555 0.074 -1.790 3.029 -3.012 21.550 32.208 -4.743 -0.397 1.560 34.385 4.806 38.707 40 AA_U175G176:C52A53_AA A 175 ? A 53 ? A 176 ? A 52 ? 1 A G 176 1_555 A C 52 1_555 A G 177 1_555 A C 51 1_555 0.418 -2.358 3.230 -0.283 4.863 31.816 -5.066 -0.802 2.844 8.807 0.512 32.178 41 AA_G176G177:C51C52_AA A 176 ? A 52 ? A 177 ? A 51 ? 1 A G 177 1_555 A C 51 1_555 A G 178 1_555 A A 81 1_555 -2.754 -2.236 3.305 8.292 -0.492 78.877 -1.740 2.378 3.063 -0.386 -6.510 79.242 42 AA_G177G178:A81C51_AA A 177 ? A 51 ? A 178 ? A 81 ? 1 A G 178 1_555 A A 81 1_555 A G 179 1_555 A A 184 1_555 -0.208 -1.512 3.692 10.740 -1.038 18.813 -3.558 5.359 3.181 -2.887 -29.882 21.664 43 AA_G178G179:A184A81_AA A 178 ? A 81 ? A 179 ? A 184 ? 1 A G 179 1_555 A A 184 1_555 A A 182 1_555 A U 82 1_555 -3.273 1.477 3.346 14.177 -1.169 -24.968 -2.640 -2.457 4.572 2.465 29.893 -28.680 44 AA_G179A182:U82A184_AA A 179 ? A 184 ? A 182 ? A 82 ? 1 A A 182 1_555 A U 82 1_555 A C 181 1_555 A G 83 1_555 -0.729 -4.975 3.417 6.554 -4.036 -13.510 21.164 1.795 1.993 15.608 25.346 -15.540 45 AA_A182C181:G83U82_AA A 182 ? A 82 ? A 181 ? A 83 ? 1 A C 181 1_555 A G 83 1_555 A A 121 1_555 A G 170 1_555 -0.231 -0.222 3.338 -3.743 6.118 81.258 -0.329 0.080 3.325 4.690 2.869 81.519 46 AA_C181A121:G170G83_AA A 181 ? A 83 ? A 121 ? A 170 ? 1 A A 121 1_555 A G 170 1_555 A G 101 1_555 A C 169 1_555 -0.625 -0.483 3.653 -5.677 6.517 72.436 -0.644 0.319 3.639 5.496 4.787 72.880 47 AA_A121G101:C169G170_AA A 121 ? A 170 ? A 101 ? A 169 ? 1 A G 101 1_555 A C 169 1_555 A C 103 1_555 A G 168 1_555 1.578 -3.487 3.693 -7.104 4.218 8.309 -21.322 -14.856 0.413 22.930 38.617 11.712 48 AA_G101C103:G168C169_AA A 101 ? A 169 ? A 103 ? A 168 ? 1 A C 103 1_555 A G 168 1_555 A C 104 1_555 A G 167 1_555 -0.761 -2.109 3.269 -1.569 1.339 29.692 -4.384 1.156 3.208 2.609 3.057 29.762 49 AA_C103C104:G167G168_AA A 103 ? A 168 ? A 104 ? A 167 ? 1 A C 104 1_555 A G 167 1_555 A U 105 1_555 A A 166 1_555 -0.184 -1.664 3.139 -1.262 5.424 33.243 -3.684 0.129 2.845 9.398 2.187 33.693 50 AA_C104U105:A166G167_AA A 104 ? A 167 ? A 105 ? A 166 ? 1 A U 105 1_555 A A 166 1_555 A G 106 1_555 A C 165 1_555 0.000 -1.862 2.820 -0.167 10.084 31.375 -4.622 -0.023 2.135 18.070 0.299 32.917 51 AA_U105G106:C165A166_AA A 105 ? A 166 ? A 106 ? A 165 ? 1 A G 106 1_555 A C 165 1_555 A C 107 1_555 A G 164 1_555 0.744 -1.030 3.476 8.098 2.205 34.695 -2.027 0.052 3.487 3.631 -13.339 35.665 52 AA_G106C107:G164C165_AA A 106 ? A 165 ? A 107 ? A 164 ? 1 A C 107 1_555 A G 164 1_555 A C 108 1_555 A G 118 1_555 1.295 -1.430 3.274 8.161 12.823 37.596 -3.473 -0.979 2.867 18.976 -12.077 40.449 53 AA_C107C108:G118G164_AA A 107 ? A 164 ? A 108 ? A 118 ? 1 A C 108 1_555 A G 118 1_555 A G 109 1_555 A C 117 1_555 -0.328 -1.765 3.416 -3.519 16.286 27.427 -5.881 0.016 2.092 30.989 6.695 32.008 54 AA_C108G109:C117G118_AA A 108 ? A 118 ? A 109 ? A 117 ? 1 A G 109 1_555 A C 117 1_555 A C 110 1_555 A G 116 1_555 0.005 -1.819 3.387 -1.595 2.104 35.091 -3.329 -0.250 3.273 3.484 2.641 35.187 55 AA_G109C110:G116C117_AA A 109 ? A 117 ? A 110 ? A 116 ? 1 A C 110 1_555 A G 116 1_555 A U 111 1_555 A G 115 1_555 -0.016 -1.550 3.586 1.950 2.237 36.562 -2.794 0.314 3.483 3.558 -3.102 36.678 56 AA_C110U111:G115G116_AA A 110 ? A 116 ? A 111 ? A 115 ? 1 A G 120 1_555 A C 162 1_555 A G 122 1_555 A C 161 1_555 1.245 -1.628 3.425 -3.825 6.553 16.947 -8.304 -5.761 2.305 20.926 12.214 18.557 57 AA_G120G122:C161C162_AA A 120 ? A 162 ? A 122 ? A 161 ? 1 A G 122 1_555 A C 161 1_555 A U 123 1_555 A U 160 1_555 0.334 -2.327 3.279 -6.572 5.093 26.517 -5.984 -2.160 2.637 10.771 13.900 27.768 58 AA_G122U123:U160C161_AA A 122 ? A 161 ? A 123 ? A 160 ? 1 A U 123 1_555 A U 160 1_555 A A 124 1_555 A U 159 1_555 -0.562 -1.755 3.221 -1.193 5.665 45.520 -2.720 0.623 3.006 7.286 1.535 45.867 59 AA_U123A124:U159U160_AA A 123 ? A 160 ? A 124 ? A 159 ? 1 A A 124 1_555 A U 159 1_555 A U 125 1_555 A C 158 1_555 -0.683 -1.499 3.298 6.218 4.232 46.954 -2.193 1.337 3.051 5.272 -7.745 47.519 60 AA_A124U125:C158U159_AA A 124 ? A 159 ? A 125 ? A 158 ? 1 A U 125 1_555 A C 158 1_555 A U 126 1_555 A A 157 1_555 -0.158 -1.292 3.465 10.950 5.082 47.234 -1.973 1.063 3.208 6.224 -13.412 48.667 61 AA_U125U126:A157C158_AA A 125 ? A 158 ? A 126 ? A 157 ? 1 A U 126 1_555 A A 157 1_555 A A 127 1_555 A A 156 1_555 3.707 -0.510 -1.701 -88.923 -150.089 -61.649 -0.069 2.047 0.373 76.207 -45.150 -175.237 62 AA_U126A127:A156A157_AA A 126 ? A 157 ? A 127 ? A 156 ? 1 A A 127 1_555 A A 156 1_555 A U 129 1_555 A A 155 1_555 -2.926 2.465 -1.141 -119.542 -131.789 -52.042 -1.642 -1.092 -0.626 66.325 -60.162 -178.139 63 AA_A127U129:A155A156_AA A 127 ? A 156 ? A 129 ? A 155 ? 1 A U 129 1_555 A A 155 1_555 A A 130 1_555 A G 154 1_555 5.071 -1.013 3.649 1.596 1.042 -8.296 4.165 38.239 2.731 -7.080 10.846 -8.512 64 AA_U129A130:G154A155_AA A 129 ? A 155 ? A 130 ? A 154 ? 1 A A 130 1_555 A G 154 1_555 A G 131 1_555 A C 153 1_555 0.085 -0.751 3.630 -1.580 1.835 62.645 -0.813 -0.160 3.606 1.764 1.519 62.687 65 AA_A130G131:C153G154_AA A 130 ? A 154 ? A 131 ? A 153 ? 1 A G 131 1_555 A C 153 1_555 A U 132 1_555 A G 152 1_555 0.020 -1.051 3.500 0.405 3.785 39.451 -2.018 0.021 3.389 5.591 -0.599 39.627 66 AA_G131U132:G152C153_AA A 131 ? A 153 ? A 132 ? A 152 ? 1 A U 132 1_555 A G 152 1_555 A G 133 1_555 A A 151 1_555 -0.231 -1.081 3.456 2.139 1.394 55.791 -1.238 0.376 3.420 1.489 -2.284 55.845 67 AA_U132G133:A151G152_AA A 132 ? A 152 ? A 133 ? A 151 ? 1 A G 133 1_555 A A 151 1_555 A A 134 1_555 A U 150 1_555 -5.094 -0.870 3.508 0.322 4.267 -10.150 -3.039 -25.969 3.719 -22.829 1.721 -11.013 68 AA_G133A134:U150A151_AA A 133 ? A 151 ? A 134 ? A 150 ? 1 A A 134 1_555 A U 150 1_555 A G 135 1_555 A G 148 1_555 -2.168 -0.775 3.709 -7.979 3.100 39.589 -1.533 2.070 3.985 4.514 11.615 40.468 69 AA_A134G135:G148U150_AA A 134 ? A 150 ? A 135 ? A 148 ? 1 A G 135 1_555 A G 148 1_555 A A 136 1_555 A G 147 1_555 1.785 -0.098 3.767 -9.953 5.050 -8.288 -6.477 -6.185 3.563 -24.216 -47.722 -13.894 70 AA_G135A136:G147G148_AA A 135 ? A 148 ? A 136 ? A 147 ? 1 A A 136 1_555 A G 147 1_555 A G 137 1_555 A C 146 1_555 0.309 -0.571 3.564 -7.064 4.958 62.508 -0.785 -0.636 3.466 4.754 6.773 63.041 71 AA_A136G137:C146G147_AA A 136 ? A 147 ? A 137 ? A 146 ? 1 A G 137 1_555 A C 146 1_555 A G 138 1_555 A C 145 1_555 0.135 -2.505 3.133 1.620 5.268 30.414 -5.616 0.029 2.675 9.939 -3.056 30.898 72 AA_G137G138:C145C146_AA A 137 ? A 146 ? A 138 ? A 145 ? 1 A G 138 1_555 A C 145 1_555 A G 139 1_555 A U 144 1_555 -1.812 -2.449 3.377 7.112 6.151 37.769 -4.372 3.523 2.592 9.327 -10.784 38.880 73 AA_G138G139:U144C145_AA A 138 ? A 145 ? A 139 ? A 144 ? # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)' 'United States' R35GM131901 1 'National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)' 'United States' R01GM071940 2 # _atom_sites.entry_id 9E73 _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.Cartn_transform_axes ? _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C MG N O P # loop_ #