HEADER UNKNOWN FUNCTION 07-NOV-24 9E9A TITLE SOLUTION STRUCTURE OF AN UNCHARACTERIZED PROTEIN CONTAINING A DUF1893 TITLE 2 DOMAIN FROM BORRELIA BURGDORFERI, A PATHOGEN RESPONSIBLE FOR LYME TITLE 3 DISEASE. SEATTLE STRUCTURAL GENOMICS CENTER FOR INFECTIOUS DISEASE TITLE 4 TARGET BOBUA.17726.A.A1. COMPND MOL_ID: 1; COMPND 2 MOLECULE: DUF1893 DOMAIN-CONTAINING PROTEIN; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BORRELIELLA BURGDORFERI B31; SOURCE 3 ORGANISM_TAXID: 224326; SOURCE 4 GENE: BB_0429; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 511693 KEYWDS LYME DISEASE, DUFS, CYTOSINE DEAMINASE, STRUCTURAL GENOMICS, SEATTLE KEYWDS 2 STRUCTURAL GENOMICS CENTER FOR INFECTIOUS DISEASE, SSGCID, UNKNOWN KEYWDS 3 FUNCTION EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR G.W.BUCHKO,SEATTLE STRUCTURAL GENOMICS CENTER FOR INFECTIOUS DISEASE AUTHOR 2 (SSGCID) REVDAT 1 04-DEC-24 9E9A 0 JRNL AUTH G.W.BUCHKO,W.C.VAN VOORHIS,P.J.MYLER JRNL TITL STRUCTURAL CHARACTERIZATION OF A DUF1893 DOMAIN CONTAINING JRNL TITL 2 PROTEIN FROM BORRELIA BURGDORFERI, A PATHOGEN RESPONSIBLE JRNL TITL 3 FOR LYME DISEASE. JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : TALOS+, CNS 1.3 REMARK 3 AUTHORS : BAX (TALOS+), BRUNGER, ADAMS, CLORE, GROS, NILGES REMARK 3 AND READ (CNS) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: STRUCTURE CALCULATIONS WERE PERFORMED REMARK 3 ITERATIVELY USING CYANA (AUTOMATED NOESY ASSIGNMENTS). A TOTAL REMARK 3 OF 20 STRUCTURES OUT OF 100 WITH LOWEST TARGET FUNCTION FROM THE REMARK 3 FINAL CYANA CALCULATION WERE TAKEN AND REFINED BY RESTRAINED REMARK 3 MOLECULAR DYNAMICS/ENERGY MINIMIZATION IN EXPLICIT WATER (CNS) REMARK 3 AFTER ADDING 0% TO THE UPPER BOUNDARY LIMIT OF THE DISTANCE REMARK 3 RESTRAINTS AND THE VDW FOR THE LOWER LIMIT. HYDROGEN BOND REMARK 3 RESTRAINTS WERE INTRODUCED ON THE BASIS OF SLOWLY EXCHANGING REMARK 3 AMIDE RESONANCES OBSERVED IN THE DEUTERIUM EXCHANGE EXPERIMENT REMARK 3 AND PROXIMITY IN EARLY STRUCTURE CALCULATIONS. STERO-ASSIGNMENTS REMARK 3 WERE MADE FOR 10/11ON THE BASIS OF 1H-13C HSQC SPECTRUM FOR THE REMARK 3 10%-CARBON-13 LABELLED SAMPLE. REMARK 4 REMARK 4 9E9A COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 08-NOV-24. REMARK 100 THE DEPOSITION ID IS D_1000289840. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 278 REMARK 210 PH : 7 REMARK 210 IONIC STRENGTH : 120 REMARK 210 PRESSURE : 1 ATM REMARK 210 SAMPLE CONTENTS : 1 MM [U-98% 13C; U-98% 15N] B26, REMARK 210 100 MM SODIUM CHLORIDE, 20 MM REMARK 210 TRIS, 1 MM DTT, 93% H2O/7% D2O; REMARK 210 1 MM [U-98% 13C; U-98% 15N] B26, REMARK 210 100 MM SODIUM CHLORIDE, 20 MM REMARK 210 TRIS, 1 MM DTT, 93% H2O/7% D2O; REMARK 210 1 MM [U-10% 13C; U-98% 15N] B26, REMARK 210 100 MM SODIUM CHLORIDE, 20 MM REMARK 210 TRIS, 1 MM DTT, 93% H2O/7% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-15N HSQC; 2D 1H-13C HSQC REMARK 210 ALIPHATIC; 2D 1H-13C HSQC REMARK 210 AROMATIC; 3D 1H-15N NOESY; 3D 1H- REMARK 210 13C NOESY ALIPHATIC; 3D 1H-13C REMARK 210 NOESY AROMATIC; 3D HNCACB; 3D REMARK 210 CBCA(CO)NH; 3D HCACO; 3D HNCO; REMARK 210 3D C(CO)NH; 3D HBHA(CO)NH; 3D REMARK 210 H(CCO)NH REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ; 700 MHZ REMARK 210 SPECTROMETER MODEL : VNMRS; ASCEND REMARK 210 SPECTROMETER MANUFACTURER : VARIAN; BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : POKY, NMRPIPE, CYANA 2.1, REMARK 210 NMRTIST REMARK 210 METHOD USED : WATER REFINEMENT REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : TARGET FUNCTION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 ASN A 27 155.66 70.10 REMARK 500 1 PRO A 28 97.63 -69.94 REMARK 500 1 ASN A 63 34.29 -97.05 REMARK 500 1 LYS A 72 -63.90 -91.66 REMARK 500 1 LYS A 114 136.02 -173.35 REMARK 500 1 ASN A 120 88.85 -66.40 REMARK 500 2 ASN A 27 127.63 68.35 REMARK 500 2 PHE A 56 64.41 -113.30 REMARK 500 2 ASN A 63 17.98 -140.63 REMARK 500 2 LYS A 64 34.99 -98.68 REMARK 500 2 LYS A 114 144.31 -171.30 REMARK 500 2 ASN A 120 85.10 -67.27 REMARK 500 3 HIS A 7 102.85 -167.05 REMARK 500 3 GLU A 13 114.76 -165.52 REMARK 500 3 THR A 16 85.27 68.77 REMARK 500 3 LEU A 26 -82.69 -132.08 REMARK 500 3 PRO A 28 93.51 -69.47 REMARK 500 3 LYS A 72 -64.01 -101.68 REMARK 500 3 LYS A 114 115.95 -170.90 REMARK 500 4 GLU A 13 137.92 -174.41 REMARK 500 4 ALA A 14 -56.67 -134.21 REMARK 500 4 PRO A 19 103.40 -58.38 REMARK 500 4 SER A 41 103.15 -161.89 REMARK 500 4 LYS A 48 74.22 36.98 REMARK 500 4 LYS A 64 -1.13 61.35 REMARK 500 4 ASP A 71 -169.40 -118.98 REMARK 500 4 LYS A 72 -62.47 -104.72 REMARK 500 4 ASN A 149 39.49 -97.12 REMARK 500 5 HIS A 5 -168.88 -103.93 REMARK 500 5 GLU A 13 95.06 -161.70 REMARK 500 5 LEU A 47 -168.47 -75.37 REMARK 500 5 LYS A 114 125.17 -171.93 REMARK 500 6 LYS A 48 87.91 60.86 REMARK 500 6 PHE A 56 64.39 -117.89 REMARK 500 6 LYS A 72 -63.76 -91.01 REMARK 500 6 ILE A 127 105.12 -55.67 REMARK 500 7 SER A 24 -158.22 -112.83 REMARK 500 7 LEU A 26 -66.27 -102.78 REMARK 500 7 LYS A 48 58.98 -162.74 REMARK 500 7 LYS A 72 -62.64 -101.42 REMARK 500 7 LYS A 114 144.01 -171.82 REMARK 500 7 GLU A 117 -62.26 -127.10 REMARK 500 7 ASN A 120 88.55 -64.37 REMARK 500 7 ASN A 149 45.83 -95.61 REMARK 500 8 LYS A 34 112.17 -164.33 REMARK 500 8 LYS A 48 92.59 62.12 REMARK 500 8 ILE A 61 76.63 -119.72 REMARK 500 8 LYS A 72 -63.92 -104.67 REMARK 500 9 PRO A 19 98.67 -64.88 REMARK 500 9 SER A 21 96.86 -68.86 REMARK 500 REMARK 500 THIS ENTRY HAS 130 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 31212 RELATED DB: BMRB REMARK 900 SOLUTION STRUCTURE OF AN UNCHARACTERIZED PROTEIN CONTAINING A REMARK 900 DUF1893 DOMAIN FROM BORRELIA BURGDORFERI, A PATHOGEN RESPONSIBLE REMARK 900 FOR LYME DISEASE. SEATTLE STRUCTURAL GENOMICS CENTER FOR INFECTIOUS REMARK 900 DISEASE TARGET BOBUA.17726.A.A1. REMARK 900 RELATED ID: BOBUA.17726.A.A1 RELATED DB: TARGETTRACK DBREF 9E9A A 22 150 UNP O51390 O51390_BORBU 1 129 SEQADV 9E9A MET A 1 UNP O51390 INITIATING METHIONINE SEQADV 9E9A ALA A 2 UNP O51390 EXPRESSION TAG SEQADV 9E9A HIS A 3 UNP O51390 EXPRESSION TAG SEQADV 9E9A HIS A 4 UNP O51390 EXPRESSION TAG SEQADV 9E9A HIS A 5 UNP O51390 EXPRESSION TAG SEQADV 9E9A HIS A 6 UNP O51390 EXPRESSION TAG SEQADV 9E9A HIS A 7 UNP O51390 EXPRESSION TAG SEQADV 9E9A HIS A 8 UNP O51390 EXPRESSION TAG SEQADV 9E9A MET A 9 UNP O51390 EXPRESSION TAG SEQADV 9E9A GLY A 10 UNP O51390 EXPRESSION TAG SEQADV 9E9A THR A 11 UNP O51390 EXPRESSION TAG SEQADV 9E9A LEU A 12 UNP O51390 EXPRESSION TAG SEQADV 9E9A GLU A 13 UNP O51390 EXPRESSION TAG SEQADV 9E9A ALA A 14 UNP O51390 EXPRESSION TAG SEQADV 9E9A GLN A 15 UNP O51390 EXPRESSION TAG SEQADV 9E9A THR A 16 UNP O51390 EXPRESSION TAG SEQADV 9E9A GLN A 17 UNP O51390 EXPRESSION TAG SEQADV 9E9A GLY A 18 UNP O51390 EXPRESSION TAG SEQADV 9E9A PRO A 19 UNP O51390 EXPRESSION TAG SEQADV 9E9A GLY A 20 UNP O51390 EXPRESSION TAG SEQADV 9E9A SER A 21 UNP O51390 EXPRESSION TAG SEQRES 1 A 150 MET ALA HIS HIS HIS HIS HIS HIS MET GLY THR LEU GLU SEQRES 2 A 150 ALA GLN THR GLN GLY PRO GLY SER MET ILE SER GLY LEU SEQRES 3 A 150 ASN PRO THR LEU ARG LEU PHE LYS ASP HIS LYS ILE LEU SEQRES 4 A 150 TYR SER ASN MET GLU ARG GLY LEU LYS PRO LEU LEU GLU SEQRES 5 A 150 VAL ASP ASN PHE ILE ASN LYS TYR ILE GLN ASN LYS GLU SEQRES 6 A 150 GLY LEU GLU ILE TYR ASP LYS VAL VAL GLY LYS ALA ALA SEQRES 7 A 150 ALA VAL ILE ILE TYR ASN ILE GLY LEU GLN ASN VAL GLN SEQRES 8 A 150 ALA GLY VAL VAL SER GLN PRO ALA LYS ASP PHE LEU GLU SEQRES 9 A 150 SER ARG GLY ILE LYS VAL ALA TYR LYS LYS LEU VAL GLU SEQRES 10 A 150 LYS ILE ASN ASP ARG ALA GLU SER LEU ILE GLU SER LEU SEQRES 11 A 150 GLU ASN PRO GLU GLU VAL TYR LYS TYR MET ILE LYS ARG SEQRES 12 A 150 GLY ILE ILE VAL ASN ASN LEU HELIX 1 AA1 PRO A 49 PHE A 56 1 8 HELIX 2 AA2 PHE A 56 ILE A 61 1 6 HELIX 3 AA3 GLY A 75 GLY A 86 1 12 HELIX 4 AA4 SER A 96 ARG A 106 1 11 HELIX 5 AA5 ARG A 122 ILE A 127 1 6 HELIX 6 AA6 ASN A 132 GLY A 144 1 13 SHEET 1 AA1 5 LYS A 37 ASN A 42 0 SHEET 2 AA1 5 LEU A 30 LYS A 34 -1 N LEU A 30 O ASN A 42 SHEET 3 AA1 5 GLU A 68 TYR A 70 -1 O GLU A 68 N PHE A 33 SHEET 4 AA1 5 ASN A 89 GLN A 91 1 O ASN A 89 N ILE A 69 SHEET 5 AA1 5 LYS A 109 ALA A 111 1 O LYS A 109 N VAL A 90 SHEET 1 AA2 2 VAL A 73 VAL A 74 0 SHEET 2 AA2 2 VAL A 94 VAL A 95 1 O VAL A 94 N VAL A 74 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1 TER 2429 LEU A 150 ENDMDL MODEL 2 TER 2429 LEU A 150 ENDMDL MODEL 3 TER 2429 LEU A 150 ENDMDL MODEL 4 TER 2429 LEU A 150 ENDMDL MODEL 5 TER 2429 LEU A 150 ENDMDL MODEL 6 TER 2429 LEU A 150 ENDMDL MODEL 7 TER 2429 LEU A 150 ENDMDL MODEL 8 TER 2429 LEU A 150 ENDMDL MODEL 9 TER 2429 LEU A 150 ENDMDL MODEL 10 TER 2429 LEU A 150 ENDMDL MODEL 11 TER 2429 LEU A 150 ENDMDL MODEL 12 TER 2429 LEU A 150 ENDMDL MODEL 13 TER 2429 LEU A 150 ENDMDL MODEL 14 TER 2429 LEU A 150 ENDMDL MODEL 15 TER 2429 LEU A 150 ENDMDL MODEL 16 TER 2429 LEU A 150 ENDMDL MODEL 17 TER 2429 LEU A 150 ENDMDL MODEL 18 TER 2429 LEU A 150 ENDMDL MODEL 19 TER 2429 LEU A 150 ENDMDL MODEL 20 TER 2429 LEU A 150 ENDMDL MASTER 170 0 0 6 7 0 0 6 1195 1 0 12 END