data_9EHE # _entry.id 9EHE # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.414 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 9EHE pdb_00009ehe 10.2210/pdb9ehe/pdb WWPDB D_1000290376 ? ? # _pdbx_audit_revision_history.ordinal 1 _pdbx_audit_revision_history.data_content_type 'Structure model' _pdbx_audit_revision_history.major_revision 1 _pdbx_audit_revision_history.minor_revision 0 _pdbx_audit_revision_history.revision_date 2026-05-27 _pdbx_audit_revision_history.part_number ? # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 9EHE _pdbx_database_status.recvd_initial_deposition_date 2024-11-22 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # _pdbx_contact_author.id 3 _pdbx_contact_author.email mao@purdue.edu _pdbx_contact_author.name_first Chengde _pdbx_contact_author.name_last Mao _pdbx_contact_author.name_mi ? _pdbx_contact_author.role 'principal investigator/group leader' _pdbx_contact_author.identifier_ORCID 0000-0001-7516-8666 # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Koomullam, N.' 1 0009-0000-3495-8434 'Batchelder-Schwab, E.' 2 0000-0002-6384-9445 'Mao, C.' 3 0000-0001-7516-8666 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country ? _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'ACS Sens' _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 2379-3694 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume ? _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title 'Fluorogenic Aptamer Optimization on a Massively Parallel Sequencing Platform.' _citation.year 2026 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1021/acssensors.5c04046 _citation.pdbx_database_id_PubMed 42112875 _citation.pdbx_database_id_patent ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Kuo, Y.A.' 1 ? primary 'Chen, Y.I.' 2 0000-0002-9559-2779 primary 'Siraj, N.' 3 ? primary 'He, Y.' 4 0000-0002-6984-3052 primary 'Yang, Z.' 5 ? primary 'Wang, Y.' 6 0000-0001-7239-8482 primary 'Batchelder-Schwab, E.J.' 7 0000-0002-6384-9445 primary 'Korkmaz, Z.' 8 ? primary 'Yonas, S.' 9 ? primary 'Nguyen, T.D.' 10 ? primary 'Hong, S.' 11 0000-0002-7618-9052 primary 'Nguyen, A.T.' 12 ? primary 'Kim, S.' 13 ? primary 'Seifi, S.' 14 ? primary 'Fan, P.H.' 15 ? primary 'Wu, Y.' 16 0000-0003-3196-5916 primary 'Liu, H.W.' 17 ? primary 'Lu, Y.' 18 0000-0003-1221-6709 primary 'Ren, P.' 19 ? primary 'Mao, C.' 20 0000-0001-7516-8666 primary 'Yeh, H.C.' 21 0000-0001-6654-5626 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn 'DNA 53-mer' 16533.549 1 ? ? ? ? 2 non-polymer syn 'POTASSIUM ION' 39.098 1 ? ? ? ? 3 non-polymer syn 'MAGNESIUM ION' 24.305 2 ? ? ? ? 4 non-polymer syn DIMETHYLFORMAMIDE 73.094 1 ? ? ? ? 5 non-polymer syn ;4-[(3-{2,16-dioxo-20-[(3aR,4R,6aS)-2-oxohexahydro-1H-thieno[3,4-d]imidazol-4-yl]-6,9,12-trioxa-3,15-diazaicosan-1-yl}-1,3-benzothiazol-3-ium-2-yl)methyl]-1-methylquinolin-1-ium ; 750.970 1 ? ? ? ? 6 water nat water 18.015 72 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type polydeoxyribonucleotide _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;(DC)(DT)(DT)(DA)(DG)(DT)(DA)(DG)(DG)(DG)(DT)(DT)(DG)(DA)(DT)(DG)(DC)(DG)(DG)(DC) (DA)(DG)(DT)(DG)(DG)(DG)(DC)(DT)(DT)(DC)(DG)(DC)(DA)(DG)(DT)(DT)(DC)(DC)(DT)(DG) (DC)(DG)(DA)(DG)(DG)(DG)(DG)(DA)(DC)(DT)(DA)(DA)(DG) ; _entity_poly.pdbx_seq_one_letter_code_can CTTAGTAGGGTTGATGCGGCAGTGGGCTTCGCAGTTCCTGCGAGGGGACTAAG _entity_poly.pdbx_strand_id B _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'POTASSIUM ION' K 3 'MAGNESIUM ION' MG 4 DIMETHYLFORMAMIDE DMF 5 ;4-[(3-{2,16-dioxo-20-[(3aR,4R,6aS)-2-oxohexahydro-1H-thieno[3,4-d]imidazol-4-yl]-6,9,12-trioxa-3,15-diazaicosan-1-yl}-1,3-benzothiazol-3-ium-2-yl)methyl]-1-methylquinolin-1-ium ; HZD 6 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DC n 1 2 DT n 1 3 DT n 1 4 DA n 1 5 DG n 1 6 DT n 1 7 DA n 1 8 DG n 1 9 DG n 1 10 DG n 1 11 DT n 1 12 DT n 1 13 DG n 1 14 DA n 1 15 DT n 1 16 DG n 1 17 DC n 1 18 DG n 1 19 DG n 1 20 DC n 1 21 DA n 1 22 DG n 1 23 DT n 1 24 DG n 1 25 DG n 1 26 DG n 1 27 DC n 1 28 DT n 1 29 DT n 1 30 DC n 1 31 DG n 1 32 DC n 1 33 DA n 1 34 DG n 1 35 DT n 1 36 DT n 1 37 DC n 1 38 DC n 1 39 DT n 1 40 DG n 1 41 DC n 1 42 DG n 1 43 DA n 1 44 DG n 1 45 DG n 1 46 DG n 1 47 DG n 1 48 DA n 1 49 DC n 1 50 DT n 1 51 DA n 1 52 DA n 1 53 DG n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 53 _pdbx_entity_src_syn.organism_scientific 'synthetic construct' _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 32630 _pdbx_entity_src_syn.details ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DMF non-polymer . DIMETHYLFORMAMIDE ? 'C3 H7 N O' 73.094 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 HOH non-polymer . WATER ? 'H2 O' 18.015 HZD non-polymer . ;4-[(3-{2,16-dioxo-20-[(3aR,4R,6aS)-2-oxohexahydro-1H-thieno[3,4-d]imidazol-4-yl]-6,9,12-trioxa-3,15-diazaicosan-1-yl}-1,3-benzothiazol-3-ium-2-yl)methyl]-1-methylquinolin-1-ium ; ? 'C38 H50 N6 O6 S2 2' 750.970 K non-polymer . 'POTASSIUM ION' ? 'K 1' 39.098 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DC 1 -5 -5 DC DC B . n A 1 2 DT 2 -4 -4 DT DT B . n A 1 3 DT 3 -3 -3 DT DT B . n A 1 4 DA 4 -2 -2 DA DA B . n A 1 5 DG 5 -1 -1 DG DG B . n A 1 6 DT 6 0 0 DT DT B . n A 1 7 DA 7 1 1 DA DA B . n A 1 8 DG 8 2 2 DG DG B . n A 1 9 DG 9 3 3 DG DG B . n A 1 10 DG 10 4 4 DG DG B . n A 1 11 DT 11 5 5 DT DT B . n A 1 12 DT 12 6 6 DT DT B . n A 1 13 DG 13 7 7 DG DG B . n A 1 14 DA 14 8 8 DA DA B . n A 1 15 DT 15 9 9 DT DT B . n A 1 16 DG 16 10 10 DG DG B . n A 1 17 DC 17 11 11 DC DC B . n A 1 18 DG 18 12 12 DG DG B . n A 1 19 DG 19 13 13 DG DG B . n A 1 20 DC 20 14 14 DC DC B . n A 1 21 DA 21 15 15 DA DA B . n A 1 22 DG 22 16 16 DG DG B . n A 1 23 DT 23 17 17 DT DT B . n A 1 24 DG 24 18 18 DG DG B . n A 1 25 DG 25 19 19 DG DG B . n A 1 26 DG 26 20 20 DG DG B . n A 1 27 DC 27 21 21 DC DC B . n A 1 28 DT 28 22 22 DT DT B . n A 1 29 DT 29 23 23 DT DT B . n A 1 30 DC 30 24 24 DC DC B . n A 1 31 DG 31 25 25 DG DG B . n A 1 32 DC 32 26 26 DC DC B . n A 1 33 DA 33 27 27 DA DA B . n A 1 34 DG 34 28 28 DG DG B . n A 1 35 DT 35 29 29 DT DT B . n A 1 36 DT 36 30 30 DT DT B . n A 1 37 DC 37 31 31 DC DC B . n A 1 38 DC 38 32 32 DC DC B . n A 1 39 DT 39 33 33 DT DT B . n A 1 40 DG 40 34 34 DG DG B . n A 1 41 DC 41 35 35 DC DC B . n A 1 42 DG 42 36 36 DG DG B . n A 1 43 DA 43 37 37 DA DA B . n A 1 44 DG 44 38 38 DG DG B . n A 1 45 DG 45 39 39 DG DG B . n A 1 46 DG 46 40 40 DG DG B . n A 1 47 DG 47 41 41 DG DG B . n A 1 48 DA 48 42 42 DA DA B . n A 1 49 DC 49 43 43 DC DC B . n A 1 50 DT 50 44 44 DT DT B . n A 1 51 DA 51 45 45 DA DA B . n A 1 52 DA 52 46 46 DA DA B . n A 1 53 DG 53 47 47 DG DG B . n # _pdbx_entity_instance_feature.ordinal 1 _pdbx_entity_instance_feature.comp_id HZD _pdbx_entity_instance_feature.asym_id ? _pdbx_entity_instance_feature.seq_num ? _pdbx_entity_instance_feature.auth_comp_id HZD _pdbx_entity_instance_feature.auth_asym_id ? _pdbx_entity_instance_feature.auth_seq_num ? _pdbx_entity_instance_feature.feature_type 'SUBJECT OF INVESTIGATION' _pdbx_entity_instance_feature.details ? # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 K 1 101 95 K K B . C 3 MG 1 102 97 MG MG B . D 4 DMF 1 103 98 DMF DMF B . E 5 HZD 1 104 1 HZD HZD B . F 3 MG 1 105 4 MG MG B . G 6 HOH 1 201 21 HOH HOH B . G 6 HOH 2 202 44 HOH HOH B . G 6 HOH 3 203 66 HOH HOH B . G 6 HOH 4 204 45 HOH HOH B . G 6 HOH 5 205 60 HOH HOH B . G 6 HOH 6 206 63 HOH HOH B . G 6 HOH 7 207 18 HOH HOH B . G 6 HOH 8 208 35 HOH HOH B . G 6 HOH 9 209 17 HOH HOH B . G 6 HOH 10 210 53 HOH HOH B . G 6 HOH 11 211 24 HOH HOH B . G 6 HOH 12 212 59 HOH HOH B . G 6 HOH 13 213 36 HOH HOH B . G 6 HOH 14 214 6 HOH HOH B . G 6 HOH 15 215 37 HOH HOH B . G 6 HOH 16 216 77 HOH HOH B . G 6 HOH 17 217 73 HOH HOH B . G 6 HOH 18 218 51 HOH HOH B . G 6 HOH 19 219 57 HOH HOH B . G 6 HOH 20 220 58 HOH HOH B . G 6 HOH 21 221 5 HOH HOH B . G 6 HOH 22 222 54 HOH HOH B . G 6 HOH 23 223 32 HOH HOH B . G 6 HOH 24 224 23 HOH HOH B . G 6 HOH 25 225 4 HOH HOH B . G 6 HOH 26 226 52 HOH HOH B . G 6 HOH 27 227 19 HOH HOH B . G 6 HOH 28 228 68 HOH HOH B . G 6 HOH 29 229 15 HOH HOH B . G 6 HOH 30 230 75 HOH HOH B . G 6 HOH 31 231 40 HOH HOH B . G 6 HOH 32 232 64 HOH HOH B . G 6 HOH 33 233 7 HOH HOH B . G 6 HOH 34 234 16 HOH HOH B . G 6 HOH 35 235 10 HOH HOH B . G 6 HOH 36 236 27 HOH HOH B . G 6 HOH 37 237 70 HOH HOH B . G 6 HOH 38 238 25 HOH HOH B . G 6 HOH 39 239 62 HOH HOH B . G 6 HOH 40 240 14 HOH HOH B . G 6 HOH 41 241 30 HOH HOH B . G 6 HOH 42 242 50 HOH HOH B . G 6 HOH 43 243 28 HOH HOH B . G 6 HOH 44 244 41 HOH HOH B . G 6 HOH 45 245 11 HOH HOH B . G 6 HOH 46 246 39 HOH HOH B . G 6 HOH 47 247 9 HOH HOH B . G 6 HOH 48 248 38 HOH HOH B . G 6 HOH 49 249 13 HOH HOH B . G 6 HOH 50 250 69 HOH HOH B . G 6 HOH 51 251 76 HOH HOH B . G 6 HOH 52 252 20 HOH HOH B . G 6 HOH 53 253 42 HOH HOH B . G 6 HOH 54 254 46 HOH HOH B . G 6 HOH 55 255 65 HOH HOH B . G 6 HOH 56 256 74 HOH HOH B . G 6 HOH 57 257 29 HOH HOH B . G 6 HOH 58 258 78 HOH HOH B . G 6 HOH 59 259 47 HOH HOH B . G 6 HOH 60 260 33 HOH HOH B . G 6 HOH 61 261 43 HOH HOH B . G 6 HOH 62 262 71 HOH HOH B . G 6 HOH 63 263 12 HOH HOH B . G 6 HOH 64 264 22 HOH HOH B . G 6 HOH 65 265 61 HOH HOH B . G 6 HOH 66 266 67 HOH HOH B . G 6 HOH 67 267 8 HOH HOH B . G 6 HOH 68 268 48 HOH HOH B . G 6 HOH 69 269 31 HOH HOH B . G 6 HOH 70 270 72 HOH HOH B . G 6 HOH 71 271 34 HOH HOH B . G 6 HOH 72 272 26 HOH HOH B . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 N 1 B HZD 104 ? C22 ? E HZD 1 C22 2 1 N 1 B HZD 104 ? C23 ? E HZD 1 C23 3 1 N 1 B HZD 104 ? C25 ? E HZD 1 C25 4 1 N 1 B HZD 104 ? C27 ? E HZD 1 C27 5 1 N 1 B HZD 104 ? C28 ? E HZD 1 C28 6 1 N 1 B HZD 104 ? C29 ? E HZD 1 C29 7 1 N 1 B HZD 104 ? C30 ? E HZD 1 C30 8 1 N 1 B HZD 104 ? C31 ? E HZD 1 C31 9 1 N 1 B HZD 104 ? C33 ? E HZD 1 C33 10 1 N 1 B HZD 104 ? C34 ? E HZD 1 C34 11 1 N 1 B HZD 104 ? C36 ? E HZD 1 C36 12 1 N 1 B HZD 104 ? C39 ? E HZD 1 C39 13 1 N 1 B HZD 104 ? N24 ? E HZD 1 N24 14 1 N 1 B HZD 104 ? N35 ? E HZD 1 N35 15 1 N 1 B HZD 104 ? N38 ? E HZD 1 N38 16 1 N 1 B HZD 104 ? O26 ? E HZD 1 O26 17 1 N 1 B HZD 104 ? O37 ? E HZD 1 O37 18 1 N 1 B HZD 104 ? S32 ? E HZD 1 S32 # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.20.1_4487 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? Aimless ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 4 # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 90.000 _cell.angle_beta_esd ? _cell.angle_gamma 90.000 _cell.angle_gamma_esd ? _cell.entry_id 9EHE _cell.details ? _cell.formula_units_Z ? _cell.length_a 24.456 _cell.length_a_esd ? _cell.length_b 43.258 _cell.length_b_esd ? _cell.length_c 118.383 _cell.length_c_esd ? _cell.volume 125239.465 _cell.volume_esd ? _cell.Z_PDB 4 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? _cell.pdbx_esd_method ? # _symmetry.entry_id 9EHE _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall 'P 2ac 2ab' _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 9EHE _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 1.89 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 35.05 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? _exptl_crystal.pdbx_mosaic_method ? _exptl_crystal.pdbx_mosaic_block_size ? _exptl_crystal.pdbx_mosaic_block_size_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details ;100 uM annealed DNA (in 20 mM MOPS KOH pH 7.0, 150 mM KCl, 1 mM MgCl2 and 10 uM EDTA) was mixed with equimolar chromophore and mixed with crystallization buffer solution (1 M magnesium chloride hexahydrate, 2 M HEPES pH 7.5 and PEG MME 550) and crystallized against 300 uL crystallization buffer and 300 uL water mixture. ; _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.temp 298 # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment N # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS EIGER X 9M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2024-08-09 _diffrn_detector.pdbx_frequency ? _diffrn_detector.id ? _diffrn_detector.number_of_axes ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.92 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'NSLS-II BEAMLINE 17-ID-1' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.92 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline 17-ID-1 _diffrn_source.pdbx_synchrotron_site NSLS-II # _reflns.B_iso_Wilson_estimate 28.44 _reflns.entry_id 9EHE _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.63 _reflns.d_resolution_low 29.60 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 16644 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 87.9 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 7.8 _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 10.7 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.999 _reflns.pdbx_CC_star ? _reflns.pdbx_R_split ? _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_CC_split_method ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_1_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_2_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[1] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[2] ? _reflns.pdbx_aniso_diffraction_limit_axis_3_ortho[3] ? _reflns.pdbx_aniso_diffraction_limit_1 ? _reflns.pdbx_aniso_diffraction_limit_2 ? _reflns.pdbx_aniso_diffraction_limit_3 ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_1_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_2_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[1] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[2] ? _reflns.pdbx_aniso_B_tensor_eigenvector_3_ortho[3] ? _reflns.pdbx_aniso_B_tensor_eigenvalue_1 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_2 ? _reflns.pdbx_aniso_B_tensor_eigenvalue_3 ? _reflns.pdbx_orthogonalization_convention ? _reflns.pdbx_percent_possible_ellipsoidal ? _reflns.pdbx_percent_possible_spherical ? _reflns.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns.pdbx_percent_possible_spherical_anomalous ? _reflns.pdbx_redundancy_anomalous ? _reflns.pdbx_CC_half_anomalous ? _reflns.pdbx_absDiff_over_sigma_anomalous ? _reflns.pdbx_percent_possible_anomalous ? _reflns.pdbx_observed_signal_threshold ? _reflns.pdbx_signal_type ? _reflns.pdbx_signal_details ? _reflns.pdbx_signal_software_id ? # _reflns_shell.d_res_high 1.63 _reflns_shell.d_res_low 1.84 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 464 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half 0.885 _reflns_shell.pdbx_CC_star ? _reflns_shell.pdbx_R_split ? _reflns_shell.percent_possible_all ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_percent_possible_ellipsoidal ? _reflns_shell.pdbx_percent_possible_spherical ? _reflns_shell.pdbx_percent_possible_ellipsoidal_anomalous ? _reflns_shell.pdbx_percent_possible_spherical_anomalous ? _reflns_shell.pdbx_redundancy_anomalous ? _reflns_shell.pdbx_CC_half_anomalous ? _reflns_shell.pdbx_absDiff_over_sigma_anomalous ? _reflns_shell.pdbx_percent_possible_anomalous ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean 45.01 _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 9EHE _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 1.63 _refine.ls_d_res_low 29.60 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 16644 _refine.ls_number_reflns_R_free 883 _refine.ls_number_reflns_R_work 15761 _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 54.76 _refine.ls_percent_reflns_R_free 5.31 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2256 _refine.ls_R_factor_R_free 0.2736 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.2231 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_R_complete ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.34 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values 'GeoStd + Monomer Library + CDL v1.2' _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.1000 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.9000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 42.8500 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.2879 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.details ? _refine_hist.d_res_high 1.63 _refine_hist.d_res_low 29.60 _refine_hist.number_atoms_solvent 72 _refine_hist.number_atoms_total 1212 _refine_hist.number_reflns_all ? _refine_hist.number_reflns_obs ? _refine_hist.number_reflns_R_free ? _refine_hist.number_reflns_R_work ? _refine_hist.R_factor_all ? _refine_hist.R_factor_obs ? _refine_hist.R_factor_R_free ? _refine_hist.R_factor_R_work ? _refine_hist.pdbx_number_residues_total ? _refine_hist.pdbx_B_iso_mean_ligand ? _refine_hist.pdbx_B_iso_mean_solvent ? _refine_hist.pdbx_number_atoms_protein 0 _refine_hist.pdbx_number_atoms_nucleic_acid 1098 _refine_hist.pdbx_number_atoms_ligand 42 _refine_hist.pdbx_number_atoms_lipid ? _refine_hist.pdbx_number_atoms_carb ? _refine_hist.pdbx_pseudo_atom_details ? # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.0097 ? 1274 ? f_bond_d ? ? 'X-RAY DIFFRACTION' ? 1.2015 ? 1959 ? f_angle_d ? ? 'X-RAY DIFFRACTION' ? 0.0556 ? 211 ? f_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.0091 ? 57 ? f_plane_restr ? ? 'X-RAY DIFFRACTION' ? 34.2781 ? 537 ? f_dihedral_angle_d ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_R_complete _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free _refine_ls_shell.R_factor_R_free 'X-RAY DIFFRACTION' 1.63 1.73 . . 20 319 6.68 . . . . 0.3275 . . . . . . . . . . . 0.3178 'X-RAY DIFFRACTION' 1.73 1.86 . . 36 512 10.92 . . . . 0.2844 . . . . . . . . . . . 0.3823 'X-RAY DIFFRACTION' 1.86 2.05 . . 60 1192 24.69 . . . . 0.3572 . . . . . . . . . . . 0.2710 'X-RAY DIFFRACTION' 2.05 2.35 . . 219 4187 87.61 . . . . 0.3312 . . . . . . . . . . . 0.3616 'X-RAY DIFFRACTION' 2.35 2.95 . . 315 4761 99.96 . . . . 0.2915 . . . . . . . . . . . 0.3410 'X-RAY DIFFRACTION' 2.96 29.60 . . 233 4790 98.94 . . . . 0.1665 . . . . . . . . . . . 0.2146 # _struct.entry_id 9EHE _struct.title 'Structure of short Lettuce aptamer (A5T variant) bound with TO1-biotin.' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 9EHE _struct_keywords.text 'Structure of short Lettuce aptamer (A5T variant) bound with TO1-biotin., DNA' _struct_keywords.pdbx_keywords DNA # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? F N N 3 ? G N N 6 ? # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 9EHE _struct_ref.pdbx_db_accession 9EHE _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin 1 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 9EHE _struct_ref_seq.pdbx_strand_id B _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 53 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession 9EHE _struct_ref_seq.db_align_beg -5 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 47 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg -5 _struct_ref_seq.pdbx_auth_seq_align_end 47 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support none _pdbx_struct_assembly_auth_evidence.details ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A DG 9 O6 ? ? ? 1_555 B K . K ? ? B DG 3 B K 101 1_555 ? ? ? ? ? ? ? 2.783 ? ? metalc2 metalc ? ? A DG 10 O6 ? ? ? 1_555 B K . K ? ? B DG 4 B K 101 1_555 ? ? ? ? ? ? ? 2.765 ? ? metalc3 metalc ? ? A DT 12 OP2 ? ? ? 1_555 F MG . MG ? ? B DT 6 B MG 105 1_555 ? ? ? ? ? ? ? 2.166 ? ? metalc4 metalc ? ? A DG 13 N7 ? ? ? 1_555 F MG . MG ? ? B DG 7 B MG 105 1_555 ? ? ? ? ? ? ? 1.960 ? ? metalc5 metalc ? ? A DT 15 OP2 ? ? ? 1_555 F MG . MG ? ? B DT 9 B MG 105 1_555 ? ? ? ? ? ? ? 2.000 ? ? metalc6 metalc ? ? A DG 18 O6 ? ? ? 1_555 B K . K ? ? B DG 12 B K 101 1_555 ? ? ? ? ? ? ? 2.723 ? ? metalc7 metalc ? ? A DG 19 O6 ? ? ? 1_555 B K . K ? ? B DG 13 B K 101 1_555 ? ? ? ? ? ? ? 2.792 ? ? metalc8 metalc ? ? A DC 20 OP2 ? ? ? 1_555 C MG . MG ? ? B DC 14 B MG 102 1_555 ? ? ? ? ? ? ? 1.789 ? ? metalc9 metalc ? ? A DG 24 O6 ? ? ? 1_555 B K . K ? ? B DG 18 B K 101 1_555 ? ? ? ? ? ? ? 2.722 ? ? metalc10 metalc ? ? A DG 25 O6 ? ? ? 1_555 B K . K ? ? B DG 19 B K 101 1_555 ? ? ? ? ? ? ? 2.704 ? ? metalc11 metalc ? ? A DG 45 O6 ? ? ? 1_555 B K . K ? ? B DG 39 B K 101 1_555 ? ? ? ? ? ? ? 2.735 ? ? metalc12 metalc ? ? A DG 46 O6 ? ? ? 1_555 B K . K ? ? B DG 40 B K 101 1_555 ? ? ? ? ? ? ? 2.874 ? ? metalc13 metalc ? ? C MG . MG ? ? ? 1_555 G HOH . O ? ? B MG 102 B HOH 225 1_555 ? ? ? ? ? ? ? 2.099 ? ? metalc14 metalc ? ? C MG . MG ? ? ? 1_555 G HOH . O ? ? B MG 102 B HOH 229 1_555 ? ? ? ? ? ? ? 1.991 ? ? metalc15 metalc ? ? C MG . MG ? ? ? 1_555 G HOH . O ? ? B MG 102 B HOH 233 1_555 ? ? ? ? ? ? ? 2.718 ? ? metalc16 metalc ? ? C MG . MG ? ? ? 1_555 G HOH . O ? ? B MG 102 B HOH 240 1_555 ? ? ? ? ? ? ? 2.062 ? ? metalc17 metalc ? ? C MG . MG ? ? ? 1_555 G HOH . O ? ? B MG 102 B HOH 242 1_555 ? ? ? ? ? ? ? 1.983 ? ? metalc18 metalc ? ? F MG . MG ? ? ? 1_555 G HOH . O ? ? B MG 105 B HOH 212 1_555 ? ? ? ? ? ? ? 1.926 ? ? metalc19 metalc ? ? F MG . MG ? ? ? 1_555 G HOH . O ? ? B MG 105 B HOH 220 1_555 ? ? ? ? ? ? ? 1.827 ? ? metalc20 metalc ? ? F MG . MG ? ? ? 1_555 G HOH . O ? ? B MG 105 B HOH 221 1_555 ? ? ? ? ? ? ? 2.390 ? ? hydrog1 hydrog ? ? A DC 1 N3 ? ? ? 1_555 A DG 53 N1 ? ? B DC -5 B DG 47 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A DC 1 N4 ? ? ? 1_555 A DG 53 O6 ? ? B DC -5 B DG 47 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A DC 1 O2 ? ? ? 1_555 A DG 53 N2 ? ? B DC -5 B DG 47 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A DT 2 N3 ? ? ? 1_555 A DA 52 N1 ? ? B DT -4 B DA 46 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A DT 2 O4 ? ? ? 1_555 A DA 52 N6 ? ? B DT -4 B DA 46 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A DT 3 N3 ? ? ? 1_555 A DA 51 N1 ? ? B DT -3 B DA 45 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A DT 3 O4 ? ? ? 1_555 A DA 51 N6 ? ? B DT -3 B DA 45 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A DA 4 N1 ? ? ? 1_555 A DT 50 N3 ? ? B DA -2 B DT 44 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A DA 4 N6 ? ? ? 1_555 A DT 50 O4 ? ? B DA -2 B DT 44 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A DG 5 N1 ? ? ? 1_555 A DC 49 N3 ? ? B DG -1 B DC 43 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A DG 5 N2 ? ? ? 1_555 A DC 49 O2 ? ? B DG -1 B DC 43 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A DG 5 O6 ? ? ? 1_555 A DC 49 N4 ? ? B DG -1 B DC 43 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A DT 6 N3 ? ? ? 1_555 A DA 48 N1 ? ? B DT 0 B DA 42 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A DT 6 O4 ? ? ? 1_555 A DA 48 N6 ? ? B DT 0 B DA 42 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A DA 7 N1 ? ? ? 1_555 A DT 23 N3 ? ? B DA 1 B DT 17 1_555 ? ? ? ? ? ? 'REVERSED WATSON-CRICK' ? ? ? hydrog16 hydrog ? ? A DA 7 N6 ? ? ? 1_555 A DT 23 O2 ? ? B DA 1 B DT 17 1_555 ? ? ? ? ? ? 'REVERSED WATSON-CRICK' ? ? ? hydrog17 hydrog ? ? A DA 7 N6 ? ? ? 1_555 A DG 47 O6 ? ? B DA 1 B DG 41 1_555 ? ? ? ? ? ? TYPE_9_PAIR ? ? ? hydrog18 hydrog ? ? A DA 7 N7 ? ? ? 1_555 A DG 47 N1 ? ? B DA 1 B DG 41 1_555 ? ? ? ? ? ? TYPE_9_PAIR ? ? ? hydrog19 hydrog ? ? A DG 8 O6 ? ? ? 1_555 A DG 22 N1 ? ? B DG 2 B DG 16 1_555 ? ? ? ? ? ? 'DG-DG MISPAIR' ? ? ? hydrog20 hydrog ? ? A DG 8 N2 ? ? ? 1_555 A DG 46 O6 ? ? B DG 2 B DG 40 1_555 ? ? ? ? ? ? 'DG-DG MISPAIR' ? ? ? hydrog21 hydrog ? ? A DG 9 N1 ? ? ? 1_555 A DG 19 O6 ? ? B DG 3 B DG 13 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog22 hydrog ? ? A DG 9 N2 ? ? ? 1_555 A DG 19 N7 ? ? B DG 3 B DG 13 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog23 hydrog ? ? A DG 9 N7 ? ? ? 1_555 A DG 46 N2 ? ? B DG 3 B DG 40 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog24 hydrog ? ? A DG 9 O6 ? ? ? 1_555 A DG 46 N1 ? ? B DG 3 B DG 40 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog25 hydrog ? ? A DG 10 N7 ? ? ? 1_555 A DG 18 N2 ? ? B DG 4 B DG 12 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog26 hydrog ? ? A DG 10 O6 ? ? ? 1_555 A DG 18 N1 ? ? B DG 4 B DG 12 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog27 hydrog ? ? A DG 10 N1 ? ? ? 1_555 A DG 45 O6 ? ? B DG 4 B DG 39 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog28 hydrog ? ? A DG 10 N2 ? ? ? 1_555 A DG 45 N7 ? ? B DG 4 B DG 39 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog29 hydrog ? ? A DT 12 O4 ? ? ? 1_555 A DC 17 N4 ? ? B DT 6 B DC 11 1_555 ? ? ? ? ? ? 'DT-DC MISPAIR' ? ? ? hydrog30 hydrog ? ? A DG 13 N1 ? ? ? 1_555 A DG 16 N7 ? ? B DG 7 B DG 10 1_555 ? ? ? ? ? ? TYPE_7_PAIR ? ? ? hydrog31 hydrog ? ? A DG 13 N2 ? ? ? 1_555 A DG 16 O6 ? ? B DG 7 B DG 10 1_555 ? ? ? ? ? ? TYPE_7_PAIR ? ? ? hydrog32 hydrog ? ? A DA 14 N6 ? ? ? 1_555 A DT 29 O4 ? ? B DA 8 B DT 23 1_555 ? ? ? ? ? ? HOOGSTEEN ? ? ? hydrog33 hydrog ? ? A DA 14 N7 ? ? ? 1_555 A DT 29 N3 ? ? B DA 8 B DT 23 1_555 ? ? ? ? ? ? HOOGSTEEN ? ? ? hydrog34 hydrog ? ? A DT 15 N3 ? ? ? 1_555 A DT 28 O2 ? ? B DT 9 B DT 22 1_555 ? ? ? ? ? ? TYPE_16_PAIR ? ? ? hydrog35 hydrog ? ? A DT 15 O4 ? ? ? 1_555 A DT 28 N3 ? ? B DT 9 B DT 22 1_555 ? ? ? ? ? ? TYPE_16_PAIR ? ? ? hydrog36 hydrog ? ? A DG 16 N1 ? ? ? 1_555 A DC 27 N3 ? ? B DG 10 B DC 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? A DG 16 N2 ? ? ? 1_555 A DC 27 O2 ? ? B DG 10 B DC 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? A DG 16 O6 ? ? ? 1_555 A DC 27 N4 ? ? B DG 10 B DC 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? A DC 17 N3 ? ? ? 1_555 A DG 26 N1 ? ? B DC 11 B DG 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog40 hydrog ? ? A DC 17 N4 ? ? ? 1_555 A DG 26 O6 ? ? B DC 11 B DG 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog41 hydrog ? ? A DC 17 O2 ? ? ? 1_555 A DG 26 N2 ? ? B DC 11 B DG 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog42 hydrog ? ? A DG 18 N7 ? ? ? 1_555 A DG 25 N2 ? ? B DG 12 B DG 19 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog43 hydrog ? ? A DG 18 O6 ? ? ? 1_555 A DG 25 N1 ? ? B DG 12 B DG 19 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog44 hydrog ? ? A DG 19 N2 ? ? ? 1_555 A DA 21 N1 ? ? B DG 13 B DA 15 1_555 ? ? ? ? ? ? TYPE_10_PAIR ? ? ? hydrog45 hydrog ? ? A DG 19 N3 ? ? ? 1_555 A DA 21 N6 ? ? B DG 13 B DA 15 1_555 ? ? ? ? ? ? TYPE_10_PAIR ? ? ? hydrog46 hydrog ? ? A DG 19 N1 ? ? ? 1_555 A DG 24 O6 ? ? B DG 13 B DG 18 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog47 hydrog ? ? A DG 19 N2 ? ? ? 1_555 A DG 24 N7 ? ? B DG 13 B DG 18 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog48 hydrog ? ? A DG 22 N2 ? ? ? 1_555 A DG 24 N7 ? ? B DG 16 B DG 18 1_555 ? ? ? ? ? ? 'DG-DG MISPAIR' ? ? ? hydrog49 hydrog ? ? A DG 24 N1 ? ? ? 1_555 A DG 46 O6 ? ? B DG 18 B DG 40 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog50 hydrog ? ? A DG 24 N2 ? ? ? 1_555 A DG 46 N7 ? ? B DG 18 B DG 40 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog51 hydrog ? ? A DG 25 N7 ? ? ? 1_555 A DG 45 N2 ? ? B DG 19 B DG 39 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog52 hydrog ? ? A DG 25 O6 ? ? ? 1_555 A DG 45 N1 ? ? B DG 19 B DG 39 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog53 hydrog ? ? A DG 26 N7 ? ? ? 1_555 A DG 44 N1 ? ? B DG 20 B DG 38 1_555 ? ? ? ? ? ? TYPE_7_PAIR ? ? ? hydrog54 hydrog ? ? A DG 26 O6 ? ? ? 1_555 A DG 44 N2 ? ? B DG 20 B DG 38 1_555 ? ? ? ? ? ? TYPE_7_PAIR ? ? ? hydrog55 hydrog ? ? A DC 30 N3 ? ? ? 1_555 A DG 42 N1 ? ? B DC 24 B DG 36 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog56 hydrog ? ? A DC 30 N4 ? ? ? 1_555 A DG 42 O6 ? ? B DC 24 B DG 36 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog57 hydrog ? ? A DC 30 O2 ? ? ? 1_555 A DG 42 N2 ? ? B DC 24 B DG 36 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog58 hydrog ? ? A DG 31 N1 ? ? ? 1_555 A DC 41 N3 ? ? B DG 25 B DC 35 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog59 hydrog ? ? A DG 31 N2 ? ? ? 1_555 A DC 41 O2 ? ? B DG 25 B DC 35 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog60 hydrog ? ? A DG 31 O6 ? ? ? 1_555 A DC 41 N4 ? ? B DG 25 B DC 35 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog61 hydrog ? ? A DC 32 N3 ? ? ? 1_555 A DG 40 N1 ? ? B DC 26 B DG 34 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog62 hydrog ? ? A DC 32 N4 ? ? ? 1_555 A DG 40 O6 ? ? B DC 26 B DG 34 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog63 hydrog ? ? A DC 32 O2 ? ? ? 1_555 A DG 40 N2 ? ? B DC 26 B DG 34 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog64 hydrog ? ? A DA 33 N1 ? ? ? 1_555 A DT 39 N3 ? ? B DA 27 B DT 33 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog65 hydrog ? ? A DA 33 N6 ? ? ? 1_555 A DT 39 O4 ? ? B DA 27 B DT 33 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog66 hydrog ? ? A DG 34 N3 ? ? ? 1_555 A DC 37 N4 ? ? B DG 28 B DC 31 1_555 ? ? ? ? ? ? 'DG-DC PAIR' ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference metalc ? ? hydrog ? ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 O6 ? A DG 9 ? B DG 3 ? 1_555 K ? B K . ? B K 101 ? 1_555 O6 ? A DG 10 ? B DG 4 ? 1_555 70.9 ? 2 O6 ? A DG 9 ? B DG 3 ? 1_555 K ? B K . ? B K 101 ? 1_555 O6 ? A DG 18 ? B DG 12 ? 1_555 119.4 ? 3 O6 ? A DG 10 ? B DG 4 ? 1_555 K ? B K . ? B K 101 ? 1_555 O6 ? A DG 18 ? B DG 12 ? 1_555 65.5 ? 4 O6 ? A DG 9 ? B DG 3 ? 1_555 K ? B K . ? B K 101 ? 1_555 O6 ? A DG 19 ? B DG 13 ? 1_555 69.8 ? 5 O6 ? A DG 10 ? B DG 4 ? 1_555 K ? B K . ? B K 101 ? 1_555 O6 ? A DG 19 ? B DG 13 ? 1_555 87.0 ? 6 O6 ? A DG 18 ? B DG 12 ? 1_555 K ? B K . ? B K 101 ? 1_555 O6 ? A DG 19 ? B DG 13 ? 1_555 67.9 ? 7 O6 ? A DG 9 ? B DG 3 ? 1_555 K ? B K . ? B K 101 ? 1_555 O6 ? A DG 24 ? B DG 18 ? 1_555 109.0 ? 8 O6 ? A DG 10 ? B DG 4 ? 1_555 K ? B K . ? B K 101 ? 1_555 O6 ? A DG 24 ? B DG 18 ? 1_555 161.6 ? 9 O6 ? A DG 18 ? B DG 12 ? 1_555 K ? B K . ? B K 101 ? 1_555 O6 ? A DG 24 ? B DG 18 ? 1_555 100.7 ? 10 O6 ? A DG 19 ? B DG 13 ? 1_555 K ? B K . ? B K 101 ? 1_555 O6 ? A DG 24 ? B DG 18 ? 1_555 76.2 ? 11 O6 ? A DG 9 ? B DG 3 ? 1_555 K ? B K . ? B K 101 ? 1_555 O6 ? A DG 25 ? B DG 19 ? 1_555 166.4 ? 12 O6 ? A DG 10 ? B DG 4 ? 1_555 K ? B K . ? B K 101 ? 1_555 O6 ? A DG 25 ? B DG 19 ? 1_555 112.1 ? 13 O6 ? A DG 18 ? B DG 12 ? 1_555 K ? B K . ? B K 101 ? 1_555 O6 ? A DG 25 ? B DG 19 ? 1_555 72.7 ? 14 O6 ? A DG 19 ? B DG 13 ? 1_555 K ? B K . ? B K 101 ? 1_555 O6 ? A DG 25 ? B DG 19 ? 1_555 123.0 ? 15 O6 ? A DG 24 ? B DG 18 ? 1_555 K ? B K . ? B K 101 ? 1_555 O6 ? A DG 25 ? B DG 19 ? 1_555 72.6 ? 16 O6 ? A DG 9 ? B DG 3 ? 1_555 K ? B K . ? B K 101 ? 1_555 O6 ? A DG 45 ? B DG 39 ? 1_555 95.6 ? 17 O6 ? A DG 10 ? B DG 4 ? 1_555 K ? B K . ? B K 101 ? 1_555 O6 ? A DG 45 ? B DG 39 ? 1_555 76.6 ? 18 O6 ? A DG 18 ? B DG 12 ? 1_555 K ? B K . ? B K 101 ? 1_555 O6 ? A DG 45 ? B DG 39 ? 1_555 112.3 ? 19 O6 ? A DG 19 ? B DG 13 ? 1_555 K ? B K . ? B K 101 ? 1_555 O6 ? A DG 45 ? B DG 39 ? 1_555 161.0 ? 20 O6 ? A DG 24 ? B DG 18 ? 1_555 K ? B K . ? B K 101 ? 1_555 O6 ? A DG 45 ? B DG 39 ? 1_555 121.2 ? 21 O6 ? A DG 25 ? B DG 19 ? 1_555 K ? B K . ? B K 101 ? 1_555 O6 ? A DG 45 ? B DG 39 ? 1_555 72.9 ? 22 O6 ? A DG 9 ? B DG 3 ? 1_555 K ? B K . ? B K 101 ? 1_555 O6 ? A DG 46 ? B DG 40 ? 1_555 67.0 ? 23 O6 ? A DG 10 ? B DG 4 ? 1_555 K ? B K . ? B K 101 ? 1_555 O6 ? A DG 46 ? B DG 40 ? 1_555 123.7 ? 24 O6 ? A DG 18 ? B DG 12 ? 1_555 K ? B K . ? B K 101 ? 1_555 O6 ? A DG 46 ? B DG 40 ? 1_555 170.8 ? 25 O6 ? A DG 19 ? B DG 13 ? 1_555 K ? B K . ? B K 101 ? 1_555 O6 ? A DG 46 ? B DG 40 ? 1_555 110.7 ? 26 O6 ? A DG 24 ? B DG 18 ? 1_555 K ? B K . ? B K 101 ? 1_555 O6 ? A DG 46 ? B DG 40 ? 1_555 70.3 ? 27 O6 ? A DG 25 ? B DG 19 ? 1_555 K ? B K . ? B K 101 ? 1_555 O6 ? A DG 46 ? B DG 40 ? 1_555 101.8 ? 28 O6 ? A DG 45 ? B DG 39 ? 1_555 K ? B K . ? B K 101 ? 1_555 O6 ? A DG 46 ? B DG 40 ? 1_555 72.2 ? 29 OP2 ? A DT 12 ? B DT 6 ? 1_555 MG ? F MG . ? B MG 105 ? 1_555 N7 ? A DG 13 ? B DG 7 ? 1_555 100.7 ? 30 OP2 ? A DT 12 ? B DT 6 ? 1_555 MG ? F MG . ? B MG 105 ? 1_555 OP2 ? A DT 15 ? B DT 9 ? 1_555 152.2 ? 31 N7 ? A DG 13 ? B DG 7 ? 1_555 MG ? F MG . ? B MG 105 ? 1_555 OP2 ? A DT 15 ? B DT 9 ? 1_555 99.1 ? 32 OP2 ? A DT 12 ? B DT 6 ? 1_555 MG ? F MG . ? B MG 105 ? 1_555 O ? G HOH . ? B HOH 212 ? 1_555 79.3 ? 33 N7 ? A DG 13 ? B DG 7 ? 1_555 MG ? F MG . ? B MG 105 ? 1_555 O ? G HOH . ? B HOH 212 ? 1_555 97.9 ? 34 OP2 ? A DT 15 ? B DT 9 ? 1_555 MG ? F MG . ? B MG 105 ? 1_555 O ? G HOH . ? B HOH 212 ? 1_555 78.8 ? 35 OP2 ? A DT 12 ? B DT 6 ? 1_555 MG ? F MG . ? B MG 105 ? 1_555 O ? G HOH . ? B HOH 220 ? 1_555 88.4 ? 36 N7 ? A DG 13 ? B DG 7 ? 1_555 MG ? F MG . ? B MG 105 ? 1_555 O ? G HOH . ? B HOH 220 ? 1_555 104.9 ? 37 OP2 ? A DT 15 ? B DT 9 ? 1_555 MG ? F MG . ? B MG 105 ? 1_555 O ? G HOH . ? B HOH 220 ? 1_555 105.2 ? 38 O ? G HOH . ? B HOH 212 ? 1_555 MG ? F MG . ? B MG 105 ? 1_555 O ? G HOH . ? B HOH 220 ? 1_555 155.7 ? 39 OP2 ? A DT 12 ? B DT 6 ? 1_555 MG ? F MG . ? B MG 105 ? 1_555 O ? G HOH . ? B HOH 221 ? 1_555 82.2 ? 40 N7 ? A DG 13 ? B DG 7 ? 1_555 MG ? F MG . ? B MG 105 ? 1_555 O ? G HOH . ? B HOH 221 ? 1_555 163.7 ? 41 OP2 ? A DT 15 ? B DT 9 ? 1_555 MG ? F MG . ? B MG 105 ? 1_555 O ? G HOH . ? B HOH 221 ? 1_555 73.5 ? 42 O ? G HOH . ? B HOH 212 ? 1_555 MG ? F MG . ? B MG 105 ? 1_555 O ? G HOH . ? B HOH 221 ? 1_555 66.7 ? 43 O ? G HOH . ? B HOH 220 ? 1_555 MG ? F MG . ? B MG 105 ? 1_555 O ? G HOH . ? B HOH 221 ? 1_555 91.1 ? 44 OP2 ? A DC 20 ? B DC 14 ? 1_555 MG ? C MG . ? B MG 102 ? 1_555 O ? G HOH . ? B HOH 225 ? 1_555 107.9 ? 45 OP2 ? A DC 20 ? B DC 14 ? 1_555 MG ? C MG . ? B MG 102 ? 1_555 O ? G HOH . ? B HOH 229 ? 1_555 122.0 ? 46 O ? G HOH . ? B HOH 225 ? 1_555 MG ? C MG . ? B MG 102 ? 1_555 O ? G HOH . ? B HOH 229 ? 1_555 88.2 ? 47 OP2 ? A DC 20 ? B DC 14 ? 1_555 MG ? C MG . ? B MG 102 ? 1_555 O ? G HOH . ? B HOH 233 ? 1_555 165.9 ? 48 O ? G HOH . ? B HOH 225 ? 1_555 MG ? C MG . ? B MG 102 ? 1_555 O ? G HOH . ? B HOH 233 ? 1_555 83.2 ? 49 O ? G HOH . ? B HOH 229 ? 1_555 MG ? C MG . ? B MG 102 ? 1_555 O ? G HOH . ? B HOH 233 ? 1_555 65.7 ? 50 OP2 ? A DC 20 ? B DC 14 ? 1_555 MG ? C MG . ? B MG 102 ? 1_555 O ? G HOH . ? B HOH 240 ? 1_555 101.6 ? 51 O ? G HOH . ? B HOH 225 ? 1_555 MG ? C MG . ? B MG 102 ? 1_555 O ? G HOH . ? B HOH 240 ? 1_555 150.2 ? 52 O ? G HOH . ? B HOH 229 ? 1_555 MG ? C MG . ? B MG 102 ? 1_555 O ? G HOH . ? B HOH 240 ? 1_555 79.5 ? 53 O ? G HOH . ? B HOH 233 ? 1_555 MG ? C MG . ? B MG 102 ? 1_555 O ? G HOH . ? B HOH 240 ? 1_555 67.1 ? 54 OP2 ? A DC 20 ? B DC 14 ? 1_555 MG ? C MG . ? B MG 102 ? 1_555 O ? G HOH . ? B HOH 242 ? 1_555 105.7 ? 55 O ? G HOH . ? B HOH 225 ? 1_555 MG ? C MG . ? B MG 102 ? 1_555 O ? G HOH . ? B HOH 242 ? 1_555 90.9 ? 56 O ? G HOH . ? B HOH 229 ? 1_555 MG ? C MG . ? B MG 102 ? 1_555 O ? G HOH . ? B HOH 242 ? 1_555 130.0 ? 57 O ? G HOH . ? B HOH 233 ? 1_555 MG ? C MG . ? B MG 102 ? 1_555 O ? G HOH . ? B HOH 242 ? 1_555 64.6 ? 58 O ? G HOH . ? B HOH 240 ? 1_555 MG ? C MG . ? B MG 102 ? 1_555 O ? G HOH . ? B HOH 242 ? 1_555 77.1 ? # _pdbx_entry_details.entry_id 9EHE _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.has_ligand_of_interest Y _pdbx_entry_details.has_protein_modification N # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O B HOH 250 ? ? O B HOH 265 ? ? 1.99 2 1 O B HOH 237 ? ? O B HOH 250 ? ? 2.14 3 1 O B HOH 241 ? ? O B HOH 258 ? ? 2.19 # loop_ _pdbx_validate_symm_contact.id _pdbx_validate_symm_contact.PDB_model_num _pdbx_validate_symm_contact.auth_atom_id_1 _pdbx_validate_symm_contact.auth_asym_id_1 _pdbx_validate_symm_contact.auth_comp_id_1 _pdbx_validate_symm_contact.auth_seq_id_1 _pdbx_validate_symm_contact.PDB_ins_code_1 _pdbx_validate_symm_contact.label_alt_id_1 _pdbx_validate_symm_contact.site_symmetry_1 _pdbx_validate_symm_contact.auth_atom_id_2 _pdbx_validate_symm_contact.auth_asym_id_2 _pdbx_validate_symm_contact.auth_comp_id_2 _pdbx_validate_symm_contact.auth_seq_id_2 _pdbx_validate_symm_contact.PDB_ins_code_2 _pdbx_validate_symm_contact.label_alt_id_2 _pdbx_validate_symm_contact.site_symmetry_2 _pdbx_validate_symm_contact.dist 1 1 O B HOH 213 ? ? 1_555 O B HOH 238 ? ? 4_445 2.07 2 1 O B HOH 206 ? ? 1_555 O B HOH 247 ? ? 2_554 2.07 # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 "O3'" B DG 2 ? ? "C3'" B DG 2 ? ? 1.376 1.419 -0.043 0.006 N 2 1 "O3'" B DT 17 ? ? "C3'" B DT 17 ? ? 1.383 1.419 -0.036 0.006 N 3 1 "O3'" B DG 28 ? ? "C3'" B DG 28 ? ? 1.375 1.419 -0.044 0.006 N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "O4'" B DG 7 ? ? "C1'" B DG 7 ? ? N9 B DG 7 ? ? 110.21 108.30 1.91 0.30 N 2 1 "O4'" B DC 11 ? ? "C1'" B DC 11 ? ? N1 B DC 11 ? ? 111.83 108.30 3.53 0.30 N # loop_ _space_group_symop.id _space_group_symop.operation_xyz 1 x,y,z 2 x+1/2,-y+1/2,-z 3 -x,y+1/2,-z+1/2 4 -x+1/2,-y,z+1/2 # _pdbx_refine_tls.id 1 _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls.details ? _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x -5.38250133064 _pdbx_refine_tls.origin_y -4.39172045297 _pdbx_refine_tls.origin_z 16.3182794046 _pdbx_refine_tls.T[1][1] 0.144549366013 _pdbx_refine_tls.T[1][1]_esd ? _pdbx_refine_tls.T[1][2] -0.0158775554312 _pdbx_refine_tls.T[1][2]_esd ? _pdbx_refine_tls.T[1][3] 0.0596163125802 _pdbx_refine_tls.T[1][3]_esd ? _pdbx_refine_tls.T[2][2] 0.209338514066 _pdbx_refine_tls.T[2][2]_esd ? _pdbx_refine_tls.T[2][3] 0.0506648505531 _pdbx_refine_tls.T[2][3]_esd ? _pdbx_refine_tls.T[3][3] 0.200857869899 _pdbx_refine_tls.T[3][3]_esd ? _pdbx_refine_tls.L[1][1] 0.625036745951 _pdbx_refine_tls.L[1][1]_esd ? _pdbx_refine_tls.L[1][2] 0.732230135006 _pdbx_refine_tls.L[1][2]_esd ? _pdbx_refine_tls.L[1][3] -1.26045577462 _pdbx_refine_tls.L[1][3]_esd ? _pdbx_refine_tls.L[2][2] 3.44356344431 _pdbx_refine_tls.L[2][2]_esd ? _pdbx_refine_tls.L[2][3] -2.4166551055 _pdbx_refine_tls.L[2][3]_esd ? _pdbx_refine_tls.L[3][3] 9.18748228077 _pdbx_refine_tls.L[3][3]_esd ? _pdbx_refine_tls.S[1][1] 0.0246468103554 _pdbx_refine_tls.S[1][1]_esd ? _pdbx_refine_tls.S[1][2] 0.0537667758275 _pdbx_refine_tls.S[1][2]_esd ? _pdbx_refine_tls.S[1][3] 0.229036909965 _pdbx_refine_tls.S[1][3]_esd ? _pdbx_refine_tls.S[2][1] -0.313584062509 _pdbx_refine_tls.S[2][1]_esd ? _pdbx_refine_tls.S[2][2] -0.0245612420832 _pdbx_refine_tls.S[2][2]_esd ? _pdbx_refine_tls.S[2][3] -0.266900422962 _pdbx_refine_tls.S[2][3]_esd ? _pdbx_refine_tls.S[3][1] -0.186752678842 _pdbx_refine_tls.S[3][1]_esd ? _pdbx_refine_tls.S[3][2] 0.301637947676 _pdbx_refine_tls.S[3][2]_esd ? _pdbx_refine_tls.S[3][3] -0.0304330156467 _pdbx_refine_tls.S[3][3]_esd ? # _pdbx_refine_tls_group.id 1 _pdbx_refine_tls_group.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls_group.refine_tls_id 1 _pdbx_refine_tls_group.beg_label_asym_id A _pdbx_refine_tls_group.beg_label_seq_id ? _pdbx_refine_tls_group.beg_auth_asym_id A _pdbx_refine_tls_group.beg_auth_seq_id 1 _pdbx_refine_tls_group.beg_PDB_ins_code ? _pdbx_refine_tls_group.end_label_asym_id G _pdbx_refine_tls_group.end_label_seq_id ? _pdbx_refine_tls_group.end_auth_asym_id S _pdbx_refine_tls_group.end_auth_seq_id 78 _pdbx_refine_tls_group.end_PDB_ins_code ? _pdbx_refine_tls_group.selection ? _pdbx_refine_tls_group.selection_details all # _pdbx_distant_solvent_atoms.id 1 _pdbx_distant_solvent_atoms.PDB_model_num 1 _pdbx_distant_solvent_atoms.auth_atom_id O _pdbx_distant_solvent_atoms.label_alt_id ? _pdbx_distant_solvent_atoms.auth_asym_id B _pdbx_distant_solvent_atoms.auth_comp_id HOH _pdbx_distant_solvent_atoms.auth_seq_id 272 _pdbx_distant_solvent_atoms.PDB_ins_code ? _pdbx_distant_solvent_atoms.neighbor_macromolecule_distance 7.04 _pdbx_distant_solvent_atoms.neighbor_ligand_distance . # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal DA OP3 O N N 1 DA P P N N 2 DA OP1 O N N 3 DA OP2 O N N 4 DA "O5'" O N N 5 DA "C5'" C N N 6 DA "C4'" C N R 7 DA "O4'" O N N 8 DA "C3'" C N S 9 DA "O3'" O N N 10 DA "C2'" C N N 11 DA "C1'" C N R 12 DA N9 N Y N 13 DA C8 C Y N 14 DA N7 N Y N 15 DA C5 C Y N 16 DA C6 C Y N 17 DA N6 N N N 18 DA N1 N Y N 19 DA C2 C Y N 20 DA N3 N Y N 21 DA C4 C Y N 22 DA HOP3 H N N 23 DA HOP2 H N N 24 DA "H5'" H N N 25 DA "H5''" H N N 26 DA "H4'" H N N 27 DA "H3'" H N N 28 DA "HO3'" H N N 29 DA "H2'" H N N 30 DA "H2''" H N N 31 DA "H1'" H N N 32 DA H8 H N N 33 DA H61 H N N 34 DA H62 H N N 35 DA H2 H N N 36 DC OP3 O N N 37 DC P P N N 38 DC OP1 O N N 39 DC OP2 O N N 40 DC "O5'" O N N 41 DC "C5'" C N N 42 DC "C4'" C N R 43 DC "O4'" O N N 44 DC "C3'" C N S 45 DC "O3'" O N N 46 DC "C2'" C N N 47 DC "C1'" C N R 48 DC N1 N N N 49 DC C2 C N N 50 DC O2 O N N 51 DC N3 N N N 52 DC C4 C N N 53 DC N4 N N N 54 DC C5 C N N 55 DC C6 C N N 56 DC HOP3 H N N 57 DC HOP2 H N N 58 DC "H5'" H N N 59 DC "H5''" H N N 60 DC "H4'" H N N 61 DC "H3'" H N N 62 DC "HO3'" H N N 63 DC "H2'" H N N 64 DC "H2''" H N N 65 DC "H1'" H N N 66 DC H41 H N N 67 DC H42 H N N 68 DC H5 H N N 69 DC H6 H N N 70 DG OP3 O N N 71 DG P P N N 72 DG OP1 O N N 73 DG OP2 O N N 74 DG "O5'" O N N 75 DG "C5'" C N N 76 DG "C4'" C N R 77 DG "O4'" O N N 78 DG "C3'" C N S 79 DG "O3'" O N N 80 DG "C2'" C N N 81 DG "C1'" C N R 82 DG N9 N Y N 83 DG C8 C Y N 84 DG N7 N Y N 85 DG C5 C Y N 86 DG C6 C N N 87 DG O6 O N N 88 DG N1 N N N 89 DG C2 C N N 90 DG N2 N N N 91 DG N3 N N N 92 DG C4 C Y N 93 DG HOP3 H N N 94 DG HOP2 H N N 95 DG "H5'" H N N 96 DG "H5''" H N N 97 DG "H4'" H N N 98 DG "H3'" H N N 99 DG "HO3'" H N N 100 DG "H2'" H N N 101 DG "H2''" H N N 102 DG "H1'" H N N 103 DG H8 H N N 104 DG H1 H N N 105 DG H21 H N N 106 DG H22 H N N 107 DMF C1 C N N 108 DMF C2 C N N 109 DMF C C N N 110 DMF O O N N 111 DMF N N N N 112 DMF H11 H N N 113 DMF H12 H N N 114 DMF H13 H N N 115 DMF H21 H N N 116 DMF H22 H N N 117 DMF H23 H N N 118 DMF HC H N N 119 DT OP3 O N N 120 DT P P N N 121 DT OP1 O N N 122 DT OP2 O N N 123 DT "O5'" O N N 124 DT "C5'" C N N 125 DT "C4'" C N R 126 DT "O4'" O N N 127 DT "C3'" C N S 128 DT "O3'" O N N 129 DT "C2'" C N N 130 DT "C1'" C N R 131 DT N1 N N N 132 DT C2 C N N 133 DT O2 O N N 134 DT N3 N N N 135 DT C4 C N N 136 DT O4 O N N 137 DT C5 C N N 138 DT C7 C N N 139 DT C6 C N N 140 DT HOP3 H N N 141 DT HOP2 H N N 142 DT "H5'" H N N 143 DT "H5''" H N N 144 DT "H4'" H N N 145 DT "H3'" H N N 146 DT "HO3'" H N N 147 DT "H2'" H N N 148 DT "H2''" H N N 149 DT "H1'" H N N 150 DT H3 H N N 151 DT H71 H N N 152 DT H72 H N N 153 DT H73 H N N 154 DT H6 H N N 155 HOH O O N N 156 HOH H1 H N N 157 HOH H2 H N N 158 HZD C10 C N N 159 HZD C01 C N N 160 HZD C03 C Y N 161 HZD C04 C Y N 162 HZD C05 C Y N 163 HZD C06 C N N 164 HZD C07 C Y N 165 HZD C09 C N N 166 HZD C13 C N N 167 HZD C14 C N N 168 HZD C16 C N N 169 HZD C17 C N N 170 HZD C19 C N N 171 HZD C20 C N N 172 HZD C22 C N N 173 HZD C23 C N N 174 HZD C25 C N N 175 HZD C27 C N N 176 HZD C28 C N N 177 HZD C29 C N N 178 HZD C30 C N N 179 HZD C31 C N R 180 HZD C33 C N N 181 HZD C34 C N S 182 HZD C36 C N N 183 HZD C39 C N R 184 HZD C40 C Y N 185 HZD C41 C Y N 186 HZD C43 C Y N 187 HZD C44 C Y N 188 HZD C45 C Y N 189 HZD C46 C Y N 190 HZD C47 C Y N 191 HZD C48 C Y N 192 HZD C49 C Y N 193 HZD C50 C Y N 194 HZD C51 C Y N 195 HZD C52 C Y N 196 HZD N02 N Y N 197 HZD N08 N Y N 198 HZD N12 N N N 199 HZD N24 N N N 200 HZD N35 N N N 201 HZD N38 N N N 202 HZD O11 O N N 203 HZD O15 O N N 204 HZD O18 O N N 205 HZD O21 O N N 206 HZD O26 O N N 207 HZD O37 O N N 208 HZD S32 S N N 209 HZD S42 S Y N 210 HZD H1 H N N 211 HZD H2 H N N 212 HZD H3 H N N 213 HZD H4 H N N 214 HZD H5 H N N 215 HZD H6 H N N 216 HZD H7 H N N 217 HZD H8 H N N 218 HZD H9 H N N 219 HZD H10 H N N 220 HZD H11 H N N 221 HZD H12 H N N 222 HZD H13 H N N 223 HZD H14 H N N 224 HZD H15 H N N 225 HZD H16 H N N 226 HZD H17 H N N 227 HZD H18 H N N 228 HZD H19 H N N 229 HZD H20 H N N 230 HZD H21 H N N 231 HZD H22 H N N 232 HZD H23 H N N 233 HZD H24 H N N 234 HZD H25 H N N 235 HZD H26 H N N 236 HZD H27 H N N 237 HZD H28 H N N 238 HZD H29 H N N 239 HZD H30 H N N 240 HZD H31 H N N 241 HZD H32 H N N 242 HZD H33 H N N 243 HZD H34 H N N 244 HZD H35 H N N 245 HZD H36 H N N 246 HZD H37 H N N 247 HZD H38 H N N 248 HZD H39 H N N 249 HZD H40 H N N 250 HZD H41 H N N 251 HZD H42 H N N 252 HZD H43 H N N 253 HZD H44 H N N 254 HZD H45 H N N 255 HZD H46 H N N 256 HZD H47 H N N 257 HZD H48 H N N 258 HZD H49 H N N 259 HZD H50 H N N 260 K K K N N 261 MG MG MG N N 262 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal DA OP3 P sing N N 1 DA OP3 HOP3 sing N N 2 DA P OP1 doub N N 3 DA P OP2 sing N N 4 DA P "O5'" sing N N 5 DA OP2 HOP2 sing N N 6 DA "O5'" "C5'" sing N N 7 DA "C5'" "C4'" sing N N 8 DA "C5'" "H5'" sing N N 9 DA "C5'" "H5''" sing N N 10 DA "C4'" "O4'" sing N N 11 DA "C4'" "C3'" sing N N 12 DA "C4'" "H4'" sing N N 13 DA "O4'" "C1'" sing N N 14 DA "C3'" "O3'" sing N N 15 DA "C3'" "C2'" sing N N 16 DA "C3'" "H3'" sing N N 17 DA "O3'" "HO3'" sing N N 18 DA "C2'" "C1'" sing N N 19 DA "C2'" "H2'" sing N N 20 DA "C2'" "H2''" sing N N 21 DA "C1'" N9 sing N N 22 DA "C1'" "H1'" sing N N 23 DA N9 C8 sing Y N 24 DA N9 C4 sing Y N 25 DA C8 N7 doub Y N 26 DA C8 H8 sing N N 27 DA N7 C5 sing Y N 28 DA C5 C6 sing Y N 29 DA C5 C4 doub Y N 30 DA C6 N6 sing N N 31 DA C6 N1 doub Y N 32 DA N6 H61 sing N N 33 DA N6 H62 sing N N 34 DA N1 C2 sing Y N 35 DA C2 N3 doub Y N 36 DA C2 H2 sing N N 37 DA N3 C4 sing Y N 38 DC OP3 P sing N N 39 DC OP3 HOP3 sing N N 40 DC P OP1 doub N N 41 DC P OP2 sing N N 42 DC P "O5'" sing N N 43 DC OP2 HOP2 sing N N 44 DC "O5'" "C5'" sing N N 45 DC "C5'" "C4'" sing N N 46 DC "C5'" "H5'" sing N N 47 DC "C5'" "H5''" sing N N 48 DC "C4'" "O4'" sing N N 49 DC "C4'" "C3'" sing N N 50 DC "C4'" "H4'" sing N N 51 DC "O4'" "C1'" sing N N 52 DC "C3'" "O3'" sing N N 53 DC "C3'" "C2'" sing N N 54 DC "C3'" "H3'" sing N N 55 DC "O3'" "HO3'" sing N N 56 DC "C2'" "C1'" sing N N 57 DC "C2'" "H2'" sing N N 58 DC "C2'" "H2''" sing N N 59 DC "C1'" N1 sing N N 60 DC "C1'" "H1'" sing N N 61 DC N1 C2 sing N N 62 DC N1 C6 sing N N 63 DC C2 O2 doub N N 64 DC C2 N3 sing N N 65 DC N3 C4 doub N N 66 DC C4 N4 sing N N 67 DC C4 C5 sing N N 68 DC N4 H41 sing N N 69 DC N4 H42 sing N N 70 DC C5 C6 doub N N 71 DC C5 H5 sing N N 72 DC C6 H6 sing N N 73 DG OP3 P sing N N 74 DG OP3 HOP3 sing N N 75 DG P OP1 doub N N 76 DG P OP2 sing N N 77 DG P "O5'" sing N N 78 DG OP2 HOP2 sing N N 79 DG "O5'" "C5'" sing N N 80 DG "C5'" "C4'" sing N N 81 DG "C5'" "H5'" sing N N 82 DG "C5'" "H5''" sing N N 83 DG "C4'" "O4'" sing N N 84 DG "C4'" "C3'" sing N N 85 DG "C4'" "H4'" sing N N 86 DG "O4'" "C1'" sing N N 87 DG "C3'" "O3'" sing N N 88 DG "C3'" "C2'" sing N N 89 DG "C3'" "H3'" sing N N 90 DG "O3'" "HO3'" sing N N 91 DG "C2'" "C1'" sing N N 92 DG "C2'" "H2'" sing N N 93 DG "C2'" "H2''" sing N N 94 DG "C1'" N9 sing N N 95 DG "C1'" "H1'" sing N N 96 DG N9 C8 sing Y N 97 DG N9 C4 sing Y N 98 DG C8 N7 doub Y N 99 DG C8 H8 sing N N 100 DG N7 C5 sing Y N 101 DG C5 C6 sing N N 102 DG C5 C4 doub Y N 103 DG C6 O6 doub N N 104 DG C6 N1 sing N N 105 DG N1 C2 sing N N 106 DG N1 H1 sing N N 107 DG C2 N2 sing N N 108 DG C2 N3 doub N N 109 DG N2 H21 sing N N 110 DG N2 H22 sing N N 111 DG N3 C4 sing N N 112 DMF C1 N sing N N 113 DMF C1 H11 sing N N 114 DMF C1 H12 sing N N 115 DMF C1 H13 sing N N 116 DMF C2 N sing N N 117 DMF C2 H21 sing N N 118 DMF C2 H22 sing N N 119 DMF C2 H23 sing N N 120 DMF C O doub N N 121 DMF C N sing N N 122 DMF C HC sing N N 123 DT OP3 P sing N N 124 DT OP3 HOP3 sing N N 125 DT P OP1 doub N N 126 DT P OP2 sing N N 127 DT P "O5'" sing N N 128 DT OP2 HOP2 sing N N 129 DT "O5'" "C5'" sing N N 130 DT "C5'" "C4'" sing N N 131 DT "C5'" "H5'" sing N N 132 DT "C5'" "H5''" sing N N 133 DT "C4'" "O4'" sing N N 134 DT "C4'" "C3'" sing N N 135 DT "C4'" "H4'" sing N N 136 DT "O4'" "C1'" sing N N 137 DT "C3'" "O3'" sing N N 138 DT "C3'" "C2'" sing N N 139 DT "C3'" "H3'" sing N N 140 DT "O3'" "HO3'" sing N N 141 DT "C2'" "C1'" sing N N 142 DT "C2'" "H2'" sing N N 143 DT "C2'" "H2''" sing N N 144 DT "C1'" N1 sing N N 145 DT "C1'" "H1'" sing N N 146 DT N1 C2 sing N N 147 DT N1 C6 sing N N 148 DT C2 O2 doub N N 149 DT C2 N3 sing N N 150 DT N3 C4 sing N N 151 DT N3 H3 sing N N 152 DT C4 O4 doub N N 153 DT C4 C5 sing N N 154 DT C5 C7 sing N N 155 DT C5 C6 doub N N 156 DT C7 H71 sing N N 157 DT C7 H72 sing N N 158 DT C7 H73 sing N N 159 DT C6 H6 sing N N 160 HOH O H1 sing N N 161 HOH O H2 sing N N 162 HZD C50 C51 doub Y N 163 HZD C50 C49 sing Y N 164 HZD C51 C52 sing Y N 165 HZD C49 C48 doub Y N 166 HZD C52 C47 doub Y N 167 HZD C48 C47 sing Y N 168 HZD C48 N02 sing Y N 169 HZD C47 C05 sing Y N 170 HZD C01 N02 sing N N 171 HZD N02 C03 doub Y N 172 HZD C05 C06 sing N N 173 HZD C05 C04 doub Y N 174 HZD C06 C07 sing N N 175 HZD C09 N08 sing N N 176 HZD C09 C10 sing N N 177 HZD C03 C04 sing Y N 178 HZD C07 N08 doub Y N 179 HZD C07 S42 sing Y N 180 HZD O11 C10 doub N N 181 HZD N08 C40 sing Y N 182 HZD C10 N12 sing N N 183 HZD S42 C41 sing Y N 184 HZD C40 C46 doub Y N 185 HZD C40 C41 sing Y N 186 HZD C46 C45 sing Y N 187 HZD C41 C43 doub Y N 188 HZD N12 C13 sing N N 189 HZD C45 C44 doub Y N 190 HZD C43 C44 sing Y N 191 HZD C13 C14 sing N N 192 HZD O15 C14 sing N N 193 HZD O15 C16 sing N N 194 HZD C23 C22 sing N N 195 HZD C23 N24 sing N N 196 HZD C16 C17 sing N N 197 HZD O18 C17 sing N N 198 HZD O18 C19 sing N N 199 HZD C22 O21 sing N N 200 HZD O21 C20 sing N N 201 HZD N24 C25 sing N N 202 HZD C20 C19 sing N N 203 HZD O26 C25 doub N N 204 HZD C25 C27 sing N N 205 HZD C28 C27 sing N N 206 HZD C28 C29 sing N N 207 HZD C29 C30 sing N N 208 HZD C30 C31 sing N N 209 HZD C31 S32 sing N N 210 HZD C31 C39 sing N N 211 HZD S32 C33 sing N N 212 HZD C39 N38 sing N N 213 HZD C39 C34 sing N N 214 HZD N38 C36 sing N N 215 HZD C33 C34 sing N N 216 HZD C34 N35 sing N N 217 HZD C36 O37 doub N N 218 HZD C36 N35 sing N N 219 HZD C01 H1 sing N N 220 HZD C01 H2 sing N N 221 HZD C01 H3 sing N N 222 HZD C03 H4 sing N N 223 HZD C04 H5 sing N N 224 HZD C06 H6 sing N N 225 HZD C06 H7 sing N N 226 HZD C09 H8 sing N N 227 HZD C09 H9 sing N N 228 HZD C13 H10 sing N N 229 HZD C13 H11 sing N N 230 HZD C14 H12 sing N N 231 HZD C14 H13 sing N N 232 HZD C16 H14 sing N N 233 HZD C16 H15 sing N N 234 HZD C17 H16 sing N N 235 HZD C17 H17 sing N N 236 HZD C19 H18 sing N N 237 HZD C19 H19 sing N N 238 HZD C20 H20 sing N N 239 HZD C20 H21 sing N N 240 HZD C22 H22 sing N N 241 HZD C22 H23 sing N N 242 HZD C23 H24 sing N N 243 HZD C23 H25 sing N N 244 HZD C27 H26 sing N N 245 HZD C27 H27 sing N N 246 HZD C28 H28 sing N N 247 HZD C28 H29 sing N N 248 HZD C29 H30 sing N N 249 HZD C29 H31 sing N N 250 HZD C30 H32 sing N N 251 HZD C30 H33 sing N N 252 HZD C31 H34 sing N N 253 HZD C33 H35 sing N N 254 HZD C33 H36 sing N N 255 HZD C34 H37 sing N N 256 HZD C39 H38 sing N N 257 HZD C43 H39 sing N N 258 HZD C44 H40 sing N N 259 HZD C45 H41 sing N N 260 HZD C46 H42 sing N N 261 HZD C49 H43 sing N N 262 HZD C50 H44 sing N N 263 HZD C51 H45 sing N N 264 HZD C52 H46 sing N N 265 HZD N12 H47 sing N N 266 HZD N24 H48 sing N N 267 HZD N35 H49 sing N N 268 HZD N38 H50 sing N N 269 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 9EHE 'double helix' 9EHE 'b-form double helix' 9EHE 'hairpin loop' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DC 1 1_555 A DG 53 1_555 0.486 -0.488 -0.054 5.341 -13.905 1.302 1 B_DC-5:DG47_B B -5 ? B 47 ? 19 1 1 A DT 2 1_555 A DA 52 1_555 -0.183 -0.112 0.093 -5.992 -10.812 1.975 2 B_DT-4:DA46_B B -4 ? B 46 ? 20 1 1 A DT 3 1_555 A DA 51 1_555 -0.135 -0.215 -0.089 -1.499 -11.762 2.747 3 B_DT-3:DA45_B B -3 ? B 45 ? 20 1 1 A DA 4 1_555 A DT 50 1_555 0.301 -0.028 -0.070 -2.091 -10.726 11.878 4 B_DA-2:DT44_B B -2 ? B 44 ? 20 1 1 A DG 5 1_555 A DC 49 1_555 0.191 -0.197 0.320 -2.867 -15.470 5.550 5 B_DG-1:DC43_B B -1 ? B 43 ? 19 1 1 A DT 6 1_555 A DA 48 1_555 -0.099 -0.235 0.279 -13.307 -18.654 5.798 6 B_DT0:DA42_B B 0 ? B 42 ? 20 1 1 A DA 7 1_555 A DT 23 1_555 0.160 1.304 -0.238 17.556 8.377 169.826 7 B_DA1:DT17_B B 1 ? B 17 ? 21 2 1 A DG 8 1_555 A DG 22 1_555 -3.161 1.411 -0.160 2.346 -29.849 -65.711 8 B_DG2:DG16_B B 2 ? B 16 ? ? 1 1 A DG 46 1_555 A DG 24 1_555 -1.625 -3.422 -0.404 19.154 4.711 90.508 9 B_DG40:DG18_B B 40 ? B 18 ? 6 3 1 A DG 45 1_555 A DG 25 1_555 1.557 3.372 0.703 -19.469 -8.693 -89.795 10 B_DG39:DG19_B B 39 ? B 19 ? 6 3 1 A DG 18 1_555 A DG 10 1_555 1.286 3.228 0.703 -10.227 -7.788 -98.342 11 B_DG12:DG4_B B 12 ? B 4 ? 6 3 1 A DG 26 1_555 A DC 17 1_555 -0.266 -0.189 -0.031 -8.477 2.460 1.683 12 B_DG20:DC11_B B 20 ? B 11 ? 19 1 1 A DC 27 1_555 A DG 16 1_555 0.262 -0.143 -0.051 8.146 -4.776 3.011 13 B_DC21:DG10_B B 21 ? B 10 ? 19 1 1 A DT 28 1_555 A DT 15 1_555 2.154 -1.937 0.569 7.820 -17.982 20.675 14 B_DT22:DT9_B B 22 ? B 9 ? 16 1 1 A DT 29 1_555 A DA 14 1_555 -1.485 3.915 0.518 -16.563 -6.260 -73.791 15 B_DT23:DA8_B B 23 ? B 8 ? 23 3 1 A DC 30 1_555 A DG 42 1_555 0.373 -0.459 -0.037 -11.478 -8.113 0.850 16 B_DC24:DG36_B B 24 ? B 36 ? 19 1 1 A DG 31 1_555 A DC 41 1_555 0.053 -0.322 0.486 0.607 -5.357 -0.373 17 B_DG25:DC35_B B 25 ? B 35 ? 19 1 1 A DC 32 1_555 A DG 40 1_555 -0.382 -0.409 0.174 -2.476 2.201 -5.967 18 B_DC26:DG34_B B 26 ? B 34 ? 19 1 1 A DA 33 1_555 A DT 39 1_555 0.642 -0.173 -0.069 3.978 -19.072 3.461 19 B_DA27:DT33_B B 27 ? B 33 ? 20 1 1 A DG 34 1_555 A DC 37 1_555 2.069 -2.701 -0.489 26.516 -32.700 -71.963 20 B_DG28:DC31_B B 28 ? B 31 ? ? 6 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DC 1 1_555 A DG 53 1_555 A DT 2 1_555 A DA 52 1_555 -0.336 -1.179 3.521 0.213 0.057 30.019 -2.288 0.696 3.517 0.109 -0.410 30.019 1 BB_DC-5DT-4:DA46DG47_BB B -5 ? B 47 ? B -4 ? B 46 ? 1 A DT 2 1_555 A DA 52 1_555 A DT 3 1_555 A DA 51 1_555 -0.493 -0.548 3.163 2.122 3.541 32.253 -1.569 1.235 3.050 6.342 -3.800 32.510 2 BB_DT-4DT-3:DA45DA46_BB B -4 ? B 46 ? B -3 ? B 45 ? 1 A DT 3 1_555 A DA 51 1_555 A DA 4 1_555 A DT 50 1_555 0.615 0.952 3.421 1.992 6.085 40.541 0.647 -0.645 3.546 8.717 -2.853 41.022 3 BB_DT-3DA-2:DT44DA45_BB B -3 ? B 45 ? B -2 ? B 44 ? 1 A DA 4 1_555 A DT 50 1_555 A DG 5 1_555 A DC 49 1_555 -0.335 -0.131 3.197 -5.397 6.607 31.525 -1.362 -0.325 3.120 11.890 9.713 32.631 4 BB_DA-2DG-1:DC43DT44_BB B -2 ? B 44 ? B -1 ? B 43 ? 1 A DG 5 1_555 A DC 49 1_555 A DT 6 1_555 A DA 48 1_555 -0.373 -0.816 3.495 2.202 3.164 34.573 -1.873 0.979 3.380 5.303 -3.691 34.781 5 BB_DG-1DT0:DA42DC43_BB B -1 ? B 43 ? B 0 ? B 42 ? 1 A DT 6 1_555 A DA 48 1_555 A DA 7 1_555 A DT 23 1_555 2.115 4.553 -2.739 150.800 56.991 69.019 2.424 -1.402 1.378 29.924 -79.179 164.539 6 BB_DT0DA1:DT17DA42_BB B 0 ? B 42 ? B 1 ? B 17 ? 1 A DA 7 1_555 A DT 23 1_555 A DG 8 1_555 A DG 22 1_555 2.239 2.067 1.178 -129.704 120.378 121.687 0.848 -1.319 0.914 60.320 64.993 178.518 7 BB_DA1DG2:DG16DT17_BB B 1 ? B 17 ? B 2 ? B 16 ? 1 A DG 8 1_555 A DG 22 1_555 A DG 46 1_555 A DG 24 1_555 1.333 2.717 -5.816 132.196 4.508 179.632 1.359 -0.675 -5.811 2.254 -66.098 179.851 8 BB_DG2DG40:DG18DG16_BB B 2 ? B 16 ? B 40 ? B 18 ? 1 A DG 46 1_555 A DG 24 1_555 A DG 45 1_555 A DG 25 1_555 -1.170 -3.567 -0.903 81.215 -144.838 148.909 -1.849 0.549 -0.195 -72.640 -40.731 176.271 9 BB_DG40DG39:DG19DG18_BB B 40 ? B 18 ? B 39 ? B 19 ? 1 A DG 45 1_555 A DG 25 1_555 A DG 18 1_555 A DG 10 1_555 1.799 3.275 0.147 28.392 -3.992 -178.789 -1.637 0.900 0.143 1.996 14.197 -178.826 10 BB_DG39DG12:DG4DG19_BB B 39 ? B 19 ? B 12 ? B 4 ? 1 A DG 26 1_555 A DC 17 1_555 A DC 27 1_555 A DG 16 1_555 -0.919 -0.181 2.936 0.332 2.789 25.207 -1.132 2.180 2.887 6.365 -0.757 25.360 11 BB_DG20DC21:DG10DC11_BB B 20 ? B 11 ? B 21 ? B 10 ? 1 A DC 27 1_555 A DG 16 1_555 A DT 28 1_555 A DT 15 1_555 1.534 0.689 3.303 -0.727 12.748 43.955 -0.269 -2.042 3.344 16.619 0.948 45.684 12 BB_DC21DT22:DT9DG10_BB B 21 ? B 10 ? B 22 ? B 9 ? 1 A DT 28 1_555 A DT 15 1_555 A DT 29 1_555 A DA 14 1_555 -0.464 -3.136 3.146 5.755 0.146 62.969 -2.998 0.686 3.091 0.140 -5.497 63.205 13 BB_DT22DT23:DA8DT9_BB B 22 ? B 9 ? B 23 ? B 8 ? 1 A DT 29 1_555 A DA 14 1_555 A DC 30 1_555 A DG 42 1_555 -0.035 1.758 3.652 -3.692 -2.288 12.897 9.898 -3.850 3.178 -9.826 15.857 13.606 14 BB_DT23DC24:DG36DA8_BB B 23 ? B 8 ? B 24 ? B 36 ? 1 A DC 30 1_555 A DG 42 1_555 A DG 31 1_555 A DC 41 1_555 -0.244 0.824 3.023 -5.968 8.145 32.180 0.145 -0.514 3.127 14.262 10.449 33.687 15 BB_DC24DG25:DC35DG36_BB B 24 ? B 36 ? B 25 ? B 35 ? 1 A DG 31 1_555 A DC 41 1_555 A DC 32 1_555 A DG 40 1_555 0.198 -0.041 3.448 1.865 1.998 32.106 -0.450 -0.005 3.445 3.604 -3.364 32.219 16 BB_DG25DC26:DG34DC35_BB B 25 ? B 35 ? B 26 ? B 34 ? 1 A DC 32 1_555 A DG 40 1_555 A DA 33 1_555 A DT 39 1_555 -0.592 1.132 3.166 2.183 1.719 41.800 1.409 1.050 3.175 2.406 -3.055 41.888 17 BB_DC26DA27:DT33DG34_BB B 26 ? B 34 ? B 27 ? B 33 ? 1 A DA 33 1_555 A DT 39 1_555 A DG 34 1_555 A DC 37 1_555 1.406 0.812 3.625 -17.015 -7.013 86.741 0.743 -1.396 3.305 -5.058 12.272 88.291 18 BB_DA27DG28:DC31DT33_BB B 27 ? B 33 ? B 28 ? B 31 ? # _pdbx_audit_support.funding_organization 'National Science Foundation (NSF, United States)' _pdbx_audit_support.country 'United States' _pdbx_audit_support.grant_number 'CCF 2107393' _pdbx_audit_support.ordinal 1 # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 8FHX _pdbx_initial_refinement_model.details ? # _space_group.name_H-M_alt 'P 21 21 21' _space_group.name_Hall 'P 2ac 2ab' _space_group.IT_number 19 _space_group.crystal_system orthorhombic _space_group.id 1 # _atom_sites.entry_id 9EHE _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.Cartn_transform_axes ? _atom_sites.fract_transf_matrix[1][1] 0.040890 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.023117 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.008447 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol _atom_type.scat_dispersion_real _atom_type.scat_dispersion_imag _atom_type.scat_Cromer_Mann_a1 _atom_type.scat_Cromer_Mann_a2 _atom_type.scat_Cromer_Mann_a3 _atom_type.scat_Cromer_Mann_a4 _atom_type.scat_Cromer_Mann_b1 _atom_type.scat_Cromer_Mann_b2 _atom_type.scat_Cromer_Mann_b3 _atom_type.scat_Cromer_Mann_b4 _atom_type.scat_Cromer_Mann_c _atom_type.scat_source _atom_type.scat_dispersion_source C ? ? 3.54356 2.42580 ? ? 25.62398 1.50364 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? K ? ? 8.66788 8.58341 1.68052 ? 12.31593 0.56275 110.00227 ? 0.0 ;3-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? MG ? ? 9.41153 2.53737 ? ? 2.59044 63.03566 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? N ? ? 4.01032 2.96436 ? ? 19.97189 1.75589 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? O ? ? 4.49882 3.47563 ? ? 15.80542 1.70748 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? P ? ? 9.51135 5.44231 ? ? 1.42069 35.72801 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? S ? ? 9.55732 6.39887 ? ? 1.23737 29.19336 ? ? 0.0 ;2-Gaussian fit: Grosse-Kunstleve RW, Sauter NK, Adams PD: Newsletter of the IUCr Commission on Crystallographic Computing 2004, 3, 22-31. ; ? # loop_ # loop_ #