HEADER LYASE 27-NOV-24 9EIX TITLE RAT CYTOSOLIC PEPCK IN COMPLEX WITH GDP AND PHOSPHOGLYCOLIC ACID TITLE 2 (293K) COMPND MOL_ID: 1; COMPND 2 MOLECULE: PHOSPHOENOLPYRUVATE CARBOXYKINASE, CYTOSOLIC [GTP]; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: PEPCK-C; COMPND 5 EC: 4.1.1.32; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: RATTUS NORVEGICUS; SOURCE 3 ORGANISM_COMMON: NORWAY RAT; SOURCE 4 ORGANISM_TAXID: 10116; SOURCE 5 GENE: PCK1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS INHIBITOR COMPLEX, METABOLIC ENZYME, MULTI-TEMPERATURE, AMBIENT KEYWDS 2 TEMPERATURE, LYASE EXPDTA X-RAY DIFFRACTION AUTHOR M.J.MCLEOD,S.A.E.BARWELL,T.HOLYOAK,R.E.THORNE REVDAT 2 14-MAY-25 9EIX 1 JRNL REVDAT 1 09-APR-25 9EIX 0 JRNL AUTH M.J.MCLEOD,S.A.E.BARWELL,T.HOLYOAK,R.E.THORNE JRNL TITL A STRUCTURAL PERSPECTIVE ON THE TEMPERATURE DEPENDENT JRNL TITL 2 ACTIVITY OF ENZYMES. JRNL REF STRUCTURE V. 33 924 2025 JRNL REFN ISSN 0969-2126 JRNL PMID 40120576 JRNL DOI 10.1016/J.STR.2025.02.013 REMARK 2 REMARK 2 RESOLUTION. 2.42 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.21.2_5419: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.42 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 56.59 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.330 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 3 NUMBER OF REFLECTIONS : 23181 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.227 REMARK 3 R VALUE (WORKING SET) : 0.224 REMARK 3 FREE R VALUE : 0.271 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1160 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 56.5900 - 4.8400 1.00 2793 164 0.1769 0.2269 REMARK 3 2 4.8400 - 3.8400 1.00 2741 146 0.1880 0.2166 REMARK 3 3 3.8400 - 3.3500 1.00 2790 154 0.2283 0.2965 REMARK 3 4 3.3500 - 3.0500 1.00 2759 121 0.2612 0.3235 REMARK 3 5 3.0500 - 2.8300 1.00 2768 131 0.2932 0.3287 REMARK 3 6 2.8300 - 2.6600 1.00 2767 123 0.3004 0.3481 REMARK 3 7 2.6600 - 2.5300 1.00 2724 160 0.3194 0.3583 REMARK 3 8 2.5300 - 2.4200 0.97 2679 161 0.3401 0.4149 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.440 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 33.200 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.001 NULL REMARK 3 ANGLE : 0.397 NULL REMARK 3 CHIRALITY : 0.039 717 REMARK 3 PLANARITY : 0.002 893 REMARK 3 DIHEDRAL : 8.026 1896 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 3 THROUGH 222 ) REMARK 3 ORIGIN FOR THE GROUP (A): -2.2022 11.3167 -6.3221 REMARK 3 T TENSOR REMARK 3 T11: 0.4120 T22: 0.5129 REMARK 3 T33: 0.4544 T12: -0.0738 REMARK 3 T13: -0.0499 T23: 0.0935 REMARK 3 L TENSOR REMARK 3 L11: 0.4750 L22: 2.1472 REMARK 3 L33: 1.3662 L12: -0.3983 REMARK 3 L13: 0.0299 L23: -0.5559 REMARK 3 S TENSOR REMARK 3 S11: -0.1098 S12: 0.0142 S13: 0.1182 REMARK 3 S21: -0.4358 S22: 0.2606 S23: 0.3700 REMARK 3 S31: 0.0721 S32: -0.4467 S33: -0.0002 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 223 THROUGH 427 ) REMARK 3 ORIGIN FOR THE GROUP (A): 8.4627 4.4071 11.1272 REMARK 3 T TENSOR REMARK 3 T11: 0.2556 T22: 0.2684 REMARK 3 T33: 0.2759 T12: -0.0862 REMARK 3 T13: 0.0354 T23: 0.0278 REMARK 3 L TENSOR REMARK 3 L11: 1.1114 L22: 2.1967 REMARK 3 L33: 1.3385 L12: 0.1537 REMARK 3 L13: -0.4565 L23: -0.7413 REMARK 3 S TENSOR REMARK 3 S11: 0.0319 S12: 0.0273 S13: -0.1553 REMARK 3 S21: 0.1502 S22: 0.1484 S23: -0.2197 REMARK 3 S31: -0.0177 S32: -0.0054 S33: 0.2937 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 428 THROUGH 622 ) REMARK 3 ORIGIN FOR THE GROUP (A): 2.6337 -16.1370 18.9136 REMARK 3 T TENSOR REMARK 3 T11: 0.3756 T22: 0.3524 REMARK 3 T33: 0.4361 T12: -0.0148 REMARK 3 T13: -0.0211 T23: -0.0269 REMARK 3 L TENSOR REMARK 3 L11: 1.6192 L22: 2.4826 REMARK 3 L33: 0.3107 L12: 1.0507 REMARK 3 L13: -0.5536 L23: -0.2889 REMARK 3 S TENSOR REMARK 3 S11: -0.0570 S12: -0.0808 S13: 0.0542 REMARK 3 S21: 0.3068 S22: 0.1520 S23: -0.0149 REMARK 3 S31: 0.0516 S32: -0.0278 S33: 0.0002 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 9EIX COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 27-NOV-24. REMARK 100 THE DEPOSITION ID IS D_1000290522. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-JAN-23 REMARK 200 TEMPERATURE (KELVIN) : 293 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : CHESS REMARK 200 BEAMLINE : 7B2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.1271 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER2 X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DIALS REMARK 200 DATA SCALING SOFTWARE : DIALS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 23314 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.420 REMARK 200 RESOLUTION RANGE LOW (A) : 120.950 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 6.570 REMARK 200 R MERGE (I) : 0.15500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 4.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.42 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.46 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 6.94 REMARK 200 R MERGE FOR SHELL (I) : 1.86700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 0.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 44.97 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.24 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M HEPES PH 7.5, 0.5 UL OF 100 MM REMARK 280 MNCL2, 100 MM GDP, AND 18-28% PEG 3350, VAPOR DIFFUSION, HANGING REMARK 280 DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 60.44650 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 PRO A 2 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 PRO A 379 CG CD REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE A 11 30.78 -88.90 REMARK 500 ASN A 74 65.22 60.12 REMARK 500 LYS A 91 34.83 -99.53 REMARK 500 SER A 108 -61.92 71.14 REMARK 500 LEU A 113 33.25 -88.18 REMARK 500 ARG A 129 -61.12 -134.32 REMARK 500 PRO A 131 98.43 -48.26 REMARK 500 LYS A 243 -70.10 -87.50 REMARK 500 LEU A 248 -64.06 -123.52 REMARK 500 TRP A 260 -164.55 -114.58 REMARK 500 ASP A 311 -69.70 -150.38 REMARK 500 LYS A 316 145.27 -173.64 REMARK 500 PRO A 418 21.43 -73.17 REMARK 500 THR A 465 -147.48 -104.02 REMARK 500 ALA A 468 -143.01 -102.44 REMARK 500 LYS A 473 72.74 -104.68 REMARK 500 ASP A 478 78.30 -153.53 REMARK 500 PHE A 480 15.25 58.23 REMARK 500 ASN A 515 93.39 -166.43 REMARK 500 ASP A 520 -162.19 -100.79 REMARK 500 PHE A 530 -112.13 58.89 REMARK 500 ASP A 548 76.80 -103.29 REMARK 500 LEU A 569 -83.51 -95.43 REMARK 500 ASN A 601 -116.71 59.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 701 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 LYS A 244 NZ REMARK 620 2 HIS A 264 NE2 89.2 REMARK 620 3 ASP A 311 OD1 89.5 78.7 REMARK 620 4 PGA A 704 O4P 75.8 127.4 148.9 REMARK 620 5 PGA A 704 O1P 103.0 162.3 113.7 46.4 REMARK 620 6 PGA A 704 O3P 84.1 172.0 96.9 55.0 25.6 REMARK 620 7 PGA A 704 P 142.3 128.1 102.1 76.0 39.5 59.2 REMARK 620 8 PGA A 704 O4P 147.9 108.6 69.0 110.2 67.2 75.5 35.0 REMARK 620 9 HOH A 802 O 154.3 96.7 116.2 80.8 66.9 91.3 35.8 52.3 REMARK 620 N 1 2 3 4 5 6 7 8 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 702 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 THR A 291 OG1 REMARK 620 2 PGA A 704 O3P 147.9 REMARK 620 3 PGA A 704 O4P 144.5 55.9 REMARK 620 4 GDP A 705 O3B 65.6 87.2 104.3 REMARK 620 5 HOH A 807 O 79.6 72.5 127.7 62.0 REMARK 620 N 1 2 3 4 DBREF 9EIX A 1 622 UNP P07379 PCKGC_RAT 1 622 SEQRES 1 A 622 MET PRO PRO GLN LEU HIS ASN GLY LEU ASP PHE SER ALA SEQRES 2 A 622 LYS VAL ILE GLN GLY SER LEU ASP SER LEU PRO GLN GLU SEQRES 3 A 622 VAL ARG LYS PHE VAL GLU GLY ASN ALA GLN LEU CYS GLN SEQRES 4 A 622 PRO GLU TYR ILE HIS ILE CYS ASP GLY SER GLU GLU GLU SEQRES 5 A 622 TYR GLY ARG LEU LEU ALA HIS MET GLN GLU GLU GLY VAL SEQRES 6 A 622 ILE ARG LYS LEU LYS LYS TYR ASP ASN CYS TRP LEU ALA SEQRES 7 A 622 LEU THR ASP PRO ARG ASP VAL ALA ARG ILE GLU SER LYS SEQRES 8 A 622 THR VAL ILE ILE THR GLN GLU GLN ARG ASP THR VAL PRO SEQRES 9 A 622 ILE PRO LYS SER GLY GLN SER GLN LEU GLY ARG TRP MET SEQRES 10 A 622 SER GLU GLU ASP PHE GLU LYS ALA PHE ASN ALA ARG PHE SEQRES 11 A 622 PRO GLY CYS MET LYS GLY ARG THR MET TYR VAL ILE PRO SEQRES 12 A 622 PHE SER MET GLY PRO LEU GLY SER PRO LEU ALA LYS ILE SEQRES 13 A 622 GLY ILE GLU LEU THR ASP SER PRO TYR VAL VAL ALA SER SEQRES 14 A 622 MET ARG ILE MET THR ARG MET GLY THR SER VAL LEU GLU SEQRES 15 A 622 ALA LEU GLY ASP GLY GLU PHE ILE LYS CYS LEU HIS SER SEQRES 16 A 622 VAL GLY CYS PRO LEU PRO LEU LYS LYS PRO LEU VAL ASN SEQRES 17 A 622 ASN TRP ALA CYS ASN PRO GLU LEU THR LEU ILE ALA HIS SEQRES 18 A 622 LEU PRO ASP ARG ARG GLU ILE ILE SER PHE GLY SER GLY SEQRES 19 A 622 TYR GLY GLY ASN SER LEU LEU GLY LYS LYS CYS PHE ALA SEQRES 20 A 622 LEU ARG ILE ALA SER ARG LEU ALA LYS GLU GLU GLY TRP SEQRES 21 A 622 LEU ALA GLU HIS MET LEU ILE LEU GLY ILE THR ASN PRO SEQRES 22 A 622 GLU GLY LYS LYS LYS TYR LEU ALA ALA ALA PHE PRO SER SEQRES 23 A 622 ALA CYS GLY LYS THR ASN LEU ALA MET MET ASN PRO THR SEQRES 24 A 622 LEU PRO GLY TRP LYS VAL GLU CYS VAL GLY ASP ASP ILE SEQRES 25 A 622 ALA TRP MET LYS PHE ASP ALA GLN GLY ASN LEU ARG ALA SEQRES 26 A 622 ILE ASN PRO GLU ASN GLY PHE PHE GLY VAL ALA PRO GLY SEQRES 27 A 622 THR SER VAL LYS THR ASN PRO ASN ALA ILE LYS THR ILE SEQRES 28 A 622 GLN LYS ASN THR ILE PHE THR ASN VAL ALA GLU THR SER SEQRES 29 A 622 ASP GLY GLY VAL TYR TRP GLU GLY ILE ASP GLU PRO LEU SEQRES 30 A 622 ALA PRO GLY VAL THR ILE THR SER TRP LYS ASN LYS GLU SEQRES 31 A 622 TRP ARG PRO GLN ASP GLU GLU PRO CYS ALA HIS PRO ASN SEQRES 32 A 622 SER ARG PHE CYS THR PRO ALA SER GLN CYS PRO ILE ILE SEQRES 33 A 622 ASP PRO ALA TRP GLU SER PRO GLU GLY VAL PRO ILE GLU SEQRES 34 A 622 GLY ILE ILE PHE GLY GLY ARG ARG PRO ALA GLY VAL PRO SEQRES 35 A 622 LEU VAL TYR GLU ALA LEU SER TRP GLN HIS GLY VAL PHE SEQRES 36 A 622 VAL GLY ALA ALA MET ARG SER GLU ALA THR ALA ALA ALA SEQRES 37 A 622 GLU HIS LYS GLY LYS VAL ILE MET HIS ASP PRO PHE ALA SEQRES 38 A 622 MET ARG PRO PHE PHE GLY TYR ASN PHE GLY LYS TYR LEU SEQRES 39 A 622 ALA HIS TRP LEU SER MET ALA HIS ARG PRO ALA ALA LYS SEQRES 40 A 622 LEU PRO LYS ILE PHE HIS VAL ASN TRP PHE ARG LYS ASP SEQRES 41 A 622 LYS ASN GLY LYS PHE LEU TRP PRO GLY PHE GLY GLU ASN SEQRES 42 A 622 SER ARG VAL LEU GLU TRP MET PHE GLY ARG ILE GLU GLY SEQRES 43 A 622 GLU ASP SER ALA LYS LEU THR PRO ILE GLY TYR VAL PRO SEQRES 44 A 622 LYS GLU ASP ALA LEU ASN LEU LYS GLY LEU GLY ASP VAL SEQRES 45 A 622 ASN VAL GLU GLU LEU PHE GLY ILE SER LYS GLU PHE TRP SEQRES 46 A 622 GLU LYS GLU VAL GLU GLU ILE ASP LYS TYR LEU GLU ASP SEQRES 47 A 622 GLN VAL ASN ALA ASP LEU PRO TYR GLU ILE GLU ARG GLU SEQRES 48 A 622 LEU ARG ALA LEU LYS GLN ARG ILE SER GLN MET HET MN A 701 1 HET MN A 702 1 HET MN A 703 1 HET PGA A 704 33 HET GDP A 705 28 HETNAM MN MANGANESE (II) ION HETNAM PGA 2-PHOSPHOGLYCOLIC ACID HETNAM GDP GUANOSINE-5'-DIPHOSPHATE FORMUL 2 MN 3(MN 2+) FORMUL 5 PGA C2 H5 O6 P FORMUL 6 GDP C10 H15 N5 O11 P2 FORMUL 7 HOH *15(H2 O) HELIX 1 AA1 ASP A 10 ALA A 13 5 4 HELIX 2 AA2 PRO A 24 GLN A 39 1 16 HELIX 3 AA3 SER A 49 GLU A 63 1 15 HELIX 4 AA4 GLU A 98 VAL A 103 1 6 HELIX 5 AA5 SER A 118 ASN A 127 1 10 HELIX 6 AA6 SER A 163 THR A 174 1 12 HELIX 7 AA7 THR A 178 GLY A 185 1 8 HELIX 8 AA8 LEU A 206 TRP A 210 5 5 HELIX 9 AA9 ASN A 213 THR A 217 5 5 HELIX 10 AB1 TYR A 235 SER A 239 5 5 HELIX 11 AB2 LEU A 248 GLY A 259 1 12 HELIX 12 AB3 GLY A 289 MET A 295 1 7 HELIX 13 AB4 ASN A 344 ILE A 351 1 8 HELIX 14 AB5 SER A 411 CYS A 413 5 3 HELIX 15 AB6 SER A 449 ALA A 459 1 11 HELIX 16 AB7 PRO A 479 PHE A 486 5 8 HELIX 17 AB8 ASN A 489 SER A 499 1 11 HELIX 18 AB9 MET A 500 HIS A 502 5 3 HELIX 19 AC1 GLY A 529 GLU A 532 5 4 HELIX 20 AC2 ASN A 533 GLY A 546 1 14 HELIX 21 AC3 ASN A 573 PHE A 578 1 6 HELIX 22 AC4 SER A 581 VAL A 600 1 20 HELIX 23 AC5 ASN A 601 LEU A 604 5 4 HELIX 24 AC6 PRO A 605 GLN A 621 1 17 SHEET 1 AA1 9 VAL A 15 GLN A 17 0 SHEET 2 AA1 9 TYR A 42 ILE A 45 1 O ILE A 43 N ILE A 16 SHEET 3 AA1 9 THR A 138 MET A 146 1 O MET A 139 N TYR A 42 SHEET 4 AA1 9 LYS A 155 THR A 161 -1 O THR A 161 N TYR A 140 SHEET 5 AA1 9 ILE A 190 SER A 195 1 O HIS A 194 N LEU A 160 SHEET 6 AA1 9 GLU A 227 PHE A 231 1 O ILE A 228 N LYS A 191 SHEET 7 AA1 9 LEU A 218 LEU A 222 -1 N ALA A 220 O ILE A 229 SHEET 8 AA1 9 THR A 92 ILE A 95 1 N ILE A 95 O HIS A 221 SHEET 9 AA1 9 TRP A 116 MET A 117 1 O MET A 117 N ILE A 94 SHEET 1 AA2 4 VAL A 15 GLN A 17 0 SHEET 2 AA2 4 TYR A 42 ILE A 45 1 O ILE A 43 N ILE A 16 SHEET 3 AA2 4 THR A 138 MET A 146 1 O MET A 139 N TYR A 42 SHEET 4 AA2 4 ARG A 175 MET A 176 -1 O ARG A 175 N SER A 145 SHEET 1 AA3 5 ILE A 66 LYS A 68 0 SHEET 2 AA3 5 ASP A 73 ALA A 78 -1 O LEU A 77 N ARG A 67 SHEET 3 AA3 5 LYS A 353 THR A 358 1 O PHE A 357 N TRP A 76 SHEET 4 AA3 5 ARG A 405 PRO A 409 -1 O CYS A 407 N ILE A 356 SHEET 5 AA3 5 GLY A 331 VAL A 335 -1 N PHE A 332 O THR A 408 SHEET 1 AA4 7 LEU A 261 GLU A 263 0 SHEET 2 AA4 7 ALA A 313 PHE A 317 -1 O MET A 315 N LEU A 261 SHEET 3 AA4 7 LEU A 323 ILE A 326 -1 O ARG A 324 N LYS A 316 SHEET 4 AA4 7 VAL A 426 GLY A 434 -1 O ILE A 428 N LEU A 323 SHEET 5 AA4 7 LYS A 277 ALA A 283 1 N ALA A 283 O ILE A 432 SHEET 6 AA4 7 LEU A 266 THR A 271 -1 N LEU A 268 O LEU A 280 SHEET 7 AA4 7 LYS A 304 GLY A 309 -1 O GLU A 306 N GLY A 269 SHEET 1 AA5 6 LEU A 261 GLU A 263 0 SHEET 2 AA5 6 ALA A 313 PHE A 317 -1 O MET A 315 N LEU A 261 SHEET 3 AA5 6 LEU A 323 ILE A 326 -1 O ARG A 324 N LYS A 316 SHEET 4 AA5 6 VAL A 426 GLY A 434 -1 O ILE A 428 N LEU A 323 SHEET 5 AA5 6 LYS A 510 VAL A 514 1 O PHE A 512 N PHE A 433 SHEET 6 AA5 6 VAL A 444 GLU A 446 -1 N TYR A 445 O HIS A 513 SHEET 1 AA6 4 VAL A 368 TYR A 369 0 SHEET 2 AA6 4 ALA A 361 THR A 363 -1 N ALA A 361 O TYR A 369 SHEET 3 AA6 4 ILE A 383 THR A 384 -1 O THR A 384 N GLU A 362 SHEET 4 AA6 4 GLU A 390 TRP A 391 -1 O TRP A 391 N ILE A 383 SHEET 1 AA7 2 ARG A 461 GLU A 463 0 SHEET 2 AA7 2 ILE A 475 HIS A 477 -1 O MET A 476 N SER A 462 SHEET 1 AA8 2 ALA A 550 LEU A 552 0 SHEET 2 AA8 2 TYR A 557 PRO A 559 -1 O VAL A 558 N LYS A 551 LINK NZ LYS A 244 MN MN A 701 1555 1555 2.66 LINK NE2 HIS A 264 MN MN A 701 1555 1555 2.30 LINK OG1 THR A 291 MN MN A 702 1555 1555 2.53 LINK OD1 ASP A 311 MN MN A 701 1555 1555 2.08 LINK NE2 HIS A 502 MN MN A 703 1555 1555 2.30 LINK MN MN A 701 O4PBPGA A 704 1555 1555 2.58 LINK MN MN A 701 O1PAPGA A 704 1555 1555 2.09 LINK MN MN A 701 O3PBPGA A 704 1555 1555 2.76 LINK MN MN A 701 P APGA A 704 1555 1555 2.52 LINK MN MN A 701 O4PAPGA A 704 1555 1555 2.50 LINK MN MN A 701 O HOH A 802 1555 1555 2.16 LINK MN MN A 701 O HOH A 803 1555 1555 2.20 LINK MN MN A 702 O3PAPGA A 704 1555 1555 2.55 LINK MN MN A 702 O4PAPGA A 704 1555 1555 2.71 LINK MN MN A 702 O3B GDP A 705 1555 1555 2.43 LINK MN MN A 702 O HOH A 807 1555 1555 2.49 CISPEP 1 LEU A 200 PRO A 201 0 1.71 CRYST1 45.416 120.893 60.826 90.00 111.52 90.00 P 1 21 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.022018 0.000000 0.008681 0.00000 SCALE2 0.000000 0.008272 0.000000 0.00000 SCALE3 0.000000 0.000000 0.017672 0.00000