data_9ELY # _entry.id 9ELY # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.404 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 9ELY pdb_00009ely 10.2210/pdb9ely/pdb WWPDB D_1000290749 ? ? EMDB EMD-48162 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date _pdbx_audit_revision_history.part_number 1 'Structure model' 1 0 2025-04-23 ? 2 'Structure model' 1 1 2025-05-21 ? 3 'Structure model' 1 2 2025-07-30 ? # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' 3 3 'Structure model' 'Data collection' 4 3 'Structure model' 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' citation_author 3 2 'Structure model' em_admin 4 3 'Structure model' citation 5 3 'Structure model' em_admin # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_em_admin.last_update' 2 3 'Structure model' '_citation.journal_volume' 3 3 'Structure model' '_citation.page_first' 4 3 'Structure model' '_citation.page_last' 5 3 'Structure model' '_em_admin.last_update' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 9ELY _pdbx_database_status.recvd_initial_deposition_date 2024-12-05 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # _pdbx_database_related.db_name EMDB _pdbx_database_related.details 'raiA RNA motif (Clostridium acetobutylicum)' _pdbx_database_related.db_id EMD-48162 _pdbx_database_related.content_type 'associated EM volume' # loop_ _pdbx_contact_author.id _pdbx_contact_author.email _pdbx_contact_author.name_first _pdbx_contact_author.name_last _pdbx_contact_author.name_mi _pdbx_contact_author.role _pdbx_contact_author.identifier_ORCID 2 wahc@stanford.edu Wah Chiu ? 'principal investigator/group leader' 0000-0002-8910-3078 3 rhiju@stanford.edu Rhiju Das ? 'principal investigator/group leader' 0000-0001-7497-0972 # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Kretsch, R.C.' 1 0000-0002-6935-518X 'Wu, Y.' 2 0009-0000-6122-2457 'Nye, G.' 3 0009-0001-6698-9988 'Das, R.' 4 0000-0001-7497-0972 'Chiu, W.' 5 0000-0002-8910-3078 # loop_ _citation.abstract _citation.abstract_id_CAS _citation.book_id_ISBN _citation.book_publisher _citation.book_publisher_city _citation.book_title _citation.coordinate_linkage _citation.country _citation.database_id_Medline _citation.details _citation.id _citation.journal_abbrev _citation.journal_id_ASTM _citation.journal_id_CSD _citation.journal_id_ISSN _citation.journal_full _citation.journal_issue _citation.journal_volume _citation.language _citation.page_first _citation.page_last _citation.title _citation.year _citation.database_id_CSD _citation.pdbx_database_id_DOI _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_patent _citation.unpublished_flag ? ? ? ? ? ? ? UK ? ? primary Nature NATUAS 0006 1476-4687 ? ? 643 ? 1135 1142 'Naturally ornate RNA-only complexes revealed by cryo-EM.' 2025 ? 10.1038/s41586-025-09073-0 40328315 ? ? ? ? ? ? ? ? ? US ? ? 1 Biorxiv ? ? 2692-8205 ? ? ? ? ? ? 'Naturally ornate RNA-only complexes revealed by cryo-EM' 2024 ? 10.1101/2024.12.08.627333 ? ? ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Kretsch, R.C.' 1 0000-0002-6935-518X primary 'Wu, Y.' 2 ? primary 'Shabalina, S.A.' 3 0000-0002-3774-819X primary 'Lee, H.' 4 0009-0006-1911-435X primary 'Nye, G.' 5 ? primary 'Koonin, E.V.' 6 0000-0003-3943-8299 primary 'Gao, A.' 7 0000-0002-3579-0327 primary 'Chiu, W.' 8 0000-0002-8910-3078 primary 'Das, R.' 9 0000-0001-7497-0972 1 'Kretsch, R.C.' 10 ? 1 'Wu, Y.' 11 ? 1 'Shabalina, S.A.' 12 ? 1 'Lee, H.' 13 ? 1 'Nye, G.' 14 ? 1 'Koonin, E.V.' 15 ? 1 'Gao, A.' 16 ? 1 'Chiu, W.' 17 ? 1 'Das, R.' 18 ? # _entity.id 1 _entity.type polymer _entity.src_method syn _entity.pdbx_description 'raiA RNA' _entity.formula_weight 66465.438 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.details ? # _entity_poly.entity_id 1 _entity_poly.type polyribonucleotide _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GGUUAAGUUAGGUUUGUGGUUGAAAGUCGAUGCCAGUCGCAGGCAAAACGAUCCACGUAAGUUAAACAAAGUUUUAAUGA GCAUGGUGCGGCUUAGAAGUAAGUCCUGCCGCUUUAGGCGAGAGUAUUAGUAGUGAGAGGGUAAUUCCGGGUAGCGAAAC UUCCAGCAGGCGAGUGUGGGGUCAAAGACCAGGUCAACUAACUUA ; _entity_poly.pdbx_seq_one_letter_code_can ;GGUUAAGUUAGGUUUGUGGUUGAAAGUCGAUGCCAGUCGCAGGCAAAACGAUCCACGUAAGUUAAACAAAGUUUUAAUGA GCAUGGUGCGGCUUAGAAGUAAGUCCUGCCGCUUUAGGCGAGAGUAUUAGUAGUGAGAGGGUAAUUCCGGGUAGCGAAAC UUCCAGCAGGCGAGUGUGGGGUCAAAGACCAGGUCAACUAACUUA ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 G n 1 2 G n 1 3 U n 1 4 U n 1 5 A n 1 6 A n 1 7 G n 1 8 U n 1 9 U n 1 10 A n 1 11 G n 1 12 G n 1 13 U n 1 14 U n 1 15 U n 1 16 G n 1 17 U n 1 18 G n 1 19 G n 1 20 U n 1 21 U n 1 22 G n 1 23 A n 1 24 A n 1 25 A n 1 26 G n 1 27 U n 1 28 C n 1 29 G n 1 30 A n 1 31 U n 1 32 G n 1 33 C n 1 34 C n 1 35 A n 1 36 G n 1 37 U n 1 38 C n 1 39 G n 1 40 C n 1 41 A n 1 42 G n 1 43 G n 1 44 C n 1 45 A n 1 46 A n 1 47 A n 1 48 A n 1 49 C n 1 50 G n 1 51 A n 1 52 U n 1 53 C n 1 54 C n 1 55 A n 1 56 C n 1 57 G n 1 58 U n 1 59 A n 1 60 A n 1 61 G n 1 62 U n 1 63 U n 1 64 A n 1 65 A n 1 66 A n 1 67 C n 1 68 A n 1 69 A n 1 70 A n 1 71 G n 1 72 U n 1 73 U n 1 74 U n 1 75 U n 1 76 A n 1 77 A n 1 78 U n 1 79 G n 1 80 A n 1 81 G n 1 82 C n 1 83 A n 1 84 U n 1 85 G n 1 86 G n 1 87 U n 1 88 G n 1 89 C n 1 90 G n 1 91 G n 1 92 C n 1 93 U n 1 94 U n 1 95 A n 1 96 G n 1 97 A n 1 98 A n 1 99 G n 1 100 U n 1 101 A n 1 102 A n 1 103 G n 1 104 U n 1 105 C n 1 106 C n 1 107 U n 1 108 G n 1 109 C n 1 110 C n 1 111 G n 1 112 C n 1 113 U n 1 114 U n 1 115 U n 1 116 A n 1 117 G n 1 118 G n 1 119 C n 1 120 G n 1 121 A n 1 122 G n 1 123 A n 1 124 G n 1 125 U n 1 126 A n 1 127 U n 1 128 U n 1 129 A n 1 130 G n 1 131 U n 1 132 A n 1 133 G n 1 134 U n 1 135 G n 1 136 A n 1 137 G n 1 138 A n 1 139 G n 1 140 G n 1 141 G n 1 142 U n 1 143 A n 1 144 A n 1 145 U n 1 146 U n 1 147 C n 1 148 C n 1 149 G n 1 150 G n 1 151 G n 1 152 U n 1 153 A n 1 154 G n 1 155 C n 1 156 G n 1 157 A n 1 158 A n 1 159 A n 1 160 C n 1 161 U n 1 162 U n 1 163 C n 1 164 C n 1 165 A n 1 166 G n 1 167 C n 1 168 A n 1 169 G n 1 170 G n 1 171 C n 1 172 G n 1 173 A n 1 174 G n 1 175 U n 1 176 G n 1 177 U n 1 178 G n 1 179 G n 1 180 G n 1 181 G n 1 182 U n 1 183 C n 1 184 A n 1 185 A n 1 186 A n 1 187 G n 1 188 A n 1 189 C n 1 190 C n 1 191 A n 1 192 G n 1 193 G n 1 194 U n 1 195 C n 1 196 A n 1 197 A n 1 198 C n 1 199 U n 1 200 A n 1 201 A n 1 202 C n 1 203 U n 1 204 U n 1 205 A n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 205 _pdbx_entity_src_syn.organism_scientific 'Clostridium acetobutylicum ATCC 824' _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 272562 _pdbx_entity_src_syn.details ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight A 'RNA linking' y "ADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 C 'RNA linking' y "CYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O8 P' 323.197 G 'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 U 'RNA linking' y "URIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O9 P' 324.181 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 G 1 -1 ? ? ? A . n A 1 2 G 2 0 ? ? ? A . n A 1 3 U 3 1 ? ? ? A . n A 1 4 U 4 2 2 U U A . n A 1 5 A 5 3 3 A A A . n A 1 6 A 6 4 4 A A A . n A 1 7 G 7 5 5 G G A . n A 1 8 U 8 6 6 U U A . n A 1 9 U 9 7 7 U U A . n A 1 10 A 10 8 8 A A A . n A 1 11 G 11 9 9 G G A . n A 1 12 G 12 10 10 G G A . n A 1 13 U 13 11 11 U U A . n A 1 14 U 14 12 12 U U A . n A 1 15 U 15 13 13 U U A . n A 1 16 G 16 14 14 G G A . n A 1 17 U 17 15 15 U U A . n A 1 18 G 18 16 16 G G A . n A 1 19 G 19 17 17 G G A . n A 1 20 U 20 18 18 U U A . n A 1 21 U 21 19 19 U U A . n A 1 22 G 22 20 20 G G A . n A 1 23 A 23 21 21 A A A . n A 1 24 A 24 22 22 A A A . n A 1 25 A 25 23 23 A A A . n A 1 26 G 26 24 24 G G A . n A 1 27 U 27 25 25 U U A . n A 1 28 C 28 26 26 C C A . n A 1 29 G 29 27 27 G G A . n A 1 30 A 30 28 28 A A A . n A 1 31 U 31 29 29 U U A . n A 1 32 G 32 30 30 G G A . n A 1 33 C 33 31 31 C C A . n A 1 34 C 34 32 32 C C A . n A 1 35 A 35 33 33 A A A . n A 1 36 G 36 34 34 G G A . n A 1 37 U 37 35 35 U U A . n A 1 38 C 38 36 36 C C A . n A 1 39 G 39 37 37 G G A . n A 1 40 C 40 38 38 C C A . n A 1 41 A 41 39 39 A A A . n A 1 42 G 42 40 40 G G A . n A 1 43 G 43 41 41 G G A . n A 1 44 C 44 42 42 C C A . n A 1 45 A 45 43 43 A A A . n A 1 46 A 46 44 44 A A A . n A 1 47 A 47 45 45 A A A . n A 1 48 A 48 46 46 A A A . n A 1 49 C 49 47 47 C C A . n A 1 50 G 50 48 48 G G A . n A 1 51 A 51 49 49 A A A . n A 1 52 U 52 50 50 U U A . n A 1 53 C 53 51 51 C C A . n A 1 54 C 54 52 52 C C A . n A 1 55 A 55 53 53 A A A . n A 1 56 C 56 54 54 C C A . n A 1 57 G 57 55 55 G G A . n A 1 58 U 58 56 56 U U A . n A 1 59 A 59 57 57 A A A . n A 1 60 A 60 58 58 A A A . n A 1 61 G 61 59 59 G G A . n A 1 62 U 62 60 60 U U A . n A 1 63 U 63 61 61 U U A . n A 1 64 A 64 62 62 A A A . n A 1 65 A 65 63 63 A A A . n A 1 66 A 66 64 64 A A A . n A 1 67 C 67 65 65 C C A . n A 1 68 A 68 66 66 A A A . n A 1 69 A 69 67 67 A A A . n A 1 70 A 70 68 68 A A A . n A 1 71 G 71 69 69 G G A . n A 1 72 U 72 70 70 U U A . n A 1 73 U 73 71 71 U U A . n A 1 74 U 74 72 72 U U A . n A 1 75 U 75 73 73 U U A . n A 1 76 A 76 74 74 A A A . n A 1 77 A 77 75 75 A A A . n A 1 78 U 78 76 76 U U A . n A 1 79 G 79 77 77 G G A . n A 1 80 A 80 78 78 A A A . n A 1 81 G 81 79 79 G G A . n A 1 82 C 82 80 80 C C A . n A 1 83 A 83 81 81 A A A . n A 1 84 U 84 82 82 U U A . n A 1 85 G 85 83 83 G G A . n A 1 86 G 86 84 84 G G A . n A 1 87 U 87 85 85 U U A . n A 1 88 G 88 86 86 G G A . n A 1 89 C 89 87 87 C C A . n A 1 90 G 90 88 88 G G A . n A 1 91 G 91 89 89 G G A . n A 1 92 C 92 90 90 C C A . n A 1 93 U 93 91 91 U U A . n A 1 94 U 94 92 92 U U A . n A 1 95 A 95 93 93 A A A . n A 1 96 G 96 94 94 G G A . n A 1 97 A 97 95 95 A A A . n A 1 98 A 98 96 96 A A A . n A 1 99 G 99 97 97 G G A . n A 1 100 U 100 98 98 U U A . n A 1 101 A 101 99 99 A A A . n A 1 102 A 102 100 100 A A A . n A 1 103 G 103 101 101 G G A . n A 1 104 U 104 102 102 U U A . n A 1 105 C 105 103 103 C C A . n A 1 106 C 106 104 104 C C A . n A 1 107 U 107 105 105 U U A . n A 1 108 G 108 106 106 G G A . n A 1 109 C 109 107 107 C C A . n A 1 110 C 110 108 108 C C A . n A 1 111 G 111 109 109 G G A . n A 1 112 C 112 110 110 C C A . n A 1 113 U 113 111 111 U U A . n A 1 114 U 114 112 112 U U A . n A 1 115 U 115 113 113 U U A . n A 1 116 A 116 114 114 A A A . n A 1 117 G 117 115 115 G G A . n A 1 118 G 118 116 116 G G A . n A 1 119 C 119 117 117 C C A . n A 1 120 G 120 118 118 G G A . n A 1 121 A 121 119 119 A A A . n A 1 122 G 122 120 120 G G A . n A 1 123 A 123 121 121 A A A . n A 1 124 G 124 122 122 G G A . n A 1 125 U 125 123 123 U U A . n A 1 126 A 126 124 124 A A A . n A 1 127 U 127 125 125 U U A . n A 1 128 U 128 126 126 U U A . n A 1 129 A 129 127 127 A A A . n A 1 130 G 130 128 128 G G A . n A 1 131 U 131 129 129 U U A . n A 1 132 A 132 130 130 A A A . n A 1 133 G 133 131 131 G G A . n A 1 134 U 134 132 132 U U A . n A 1 135 G 135 133 133 G G A . n A 1 136 A 136 134 134 A A A . n A 1 137 G 137 135 135 G G A . n A 1 138 A 138 136 136 A A A . n A 1 139 G 139 137 137 G G A . n A 1 140 G 140 138 138 G G A . n A 1 141 G 141 139 139 G G A . n A 1 142 U 142 140 140 U U A . n A 1 143 A 143 141 141 A A A . n A 1 144 A 144 142 142 A A A . n A 1 145 U 145 143 143 U U A . n A 1 146 U 146 144 144 U U A . n A 1 147 C 147 145 145 C C A . n A 1 148 C 148 146 146 C C A . n A 1 149 G 149 147 147 G G A . n A 1 150 G 150 148 148 G G A . n A 1 151 G 151 149 149 G G A . n A 1 152 U 152 150 150 U U A . n A 1 153 A 153 151 151 A A A . n A 1 154 G 154 152 152 G G A . n A 1 155 C 155 153 153 C C A . n A 1 156 G 156 154 154 G G A . n A 1 157 A 157 155 155 A A A . n A 1 158 A 158 156 156 A A A . n A 1 159 A 159 157 157 A A A . n A 1 160 C 160 158 158 C C A . n A 1 161 U 161 159 159 U U A . n A 1 162 U 162 160 160 U U A . n A 1 163 C 163 161 161 C C A . n A 1 164 C 164 162 162 C C A . n A 1 165 A 165 163 163 A A A . n A 1 166 G 166 164 164 G G A . n A 1 167 C 167 165 165 C C A . n A 1 168 A 168 166 166 A A A . n A 1 169 G 169 167 167 G G A . n A 1 170 G 170 168 168 G G A . n A 1 171 C 171 169 169 C C A . n A 1 172 G 172 170 170 G G A . n A 1 173 A 173 171 171 A A A . n A 1 174 G 174 172 172 G G A . n A 1 175 U 175 173 173 U U A . n A 1 176 G 176 174 174 G G A . n A 1 177 U 177 175 175 U U A . n A 1 178 G 178 176 176 G G A . n A 1 179 G 179 177 177 G G A . n A 1 180 G 180 178 178 G G A . n A 1 181 G 181 179 179 G G A . n A 1 182 U 182 180 180 U U A . n A 1 183 C 183 181 181 C C A . n A 1 184 A 184 182 182 A A A . n A 1 185 A 185 183 183 A A A . n A 1 186 A 186 184 184 A A A . n A 1 187 G 187 185 185 G G A . n A 1 188 A 188 186 186 A A A . n A 1 189 C 189 187 187 C C A . n A 1 190 C 190 188 188 C C A . n A 1 191 A 191 189 189 A A A . n A 1 192 G 192 190 190 G G A . n A 1 193 G 193 191 191 G G A . n A 1 194 U 194 192 192 U U A . n A 1 195 C 195 193 193 C C A . n A 1 196 A 196 194 194 A A A . n A 1 197 A 197 195 195 A A A . n A 1 198 C 198 196 196 C C A . n A 1 199 U 199 197 197 U U A . n A 1 200 A 200 198 198 A A A . n A 1 201 A 201 199 199 A A A . n A 1 202 C 202 200 200 C C A . n A 1 203 U 203 201 201 U U A . n A 1 204 U 204 202 202 U U A . n A 1 205 A 205 203 203 A A A . n # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A U 2 ? P ? A U 4 P 2 1 Y 1 A U 2 ? OP1 ? A U 4 OP1 3 1 Y 1 A U 2 ? OP2 ? A U 4 OP2 4 1 Y 1 A U 2 ? "O5'" ? A U 4 "O5'" # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 9ELY _exptl.crystals_number ? _exptl.details ? _exptl.method 'ELECTRON MICROSCOPY' _exptl.method_details ? # _struct.entry_id 9ELY _struct.title 'raiA RNA motif (Clostridium acetobutylicum)' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 9ELY _struct_keywords.text 'raiA, ncRNA, RNA' _struct_keywords.pdbx_keywords RNA # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_ref.id 1 _struct_ref.db_name GB _struct_ref.db_code AE001437.1 _struct_ref.pdbx_db_accession 25168256 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;UAUUAAGUUAGGUUUGUGGUUGAAAGUCGAUGCCAGUCGCAGGCAAAACGAUCCACGUAAGUUAAACAAAGUUUUAAUGA GCAUGGUGCGGCUUAGAAGUAAGUCCUGCCGCUUUAGGCGAGAGUAUUAGUAGUGAGAGGGUAAUUCCGGGUAGCGAAAC UUCCAGCAGGCGAGUGUGGGGUCAAAGACCAGGUCAACUAACUUA ; _struct_ref.pdbx_align_begin 2985435 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 9ELY _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 205 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession 25168256 _struct_ref_seq.db_align_beg 2985435 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 2985231 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg -1 _struct_ref_seq.pdbx_auth_seq_align_end 203 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 9ELY G A 1 ? GB 25168256 U 2985435 conflict -1 1 1 9ELY G A 2 ? GB 25168256 A 2985434 conflict 0 2 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'electron microscopy' _pdbx_struct_assembly_auth_evidence.details 'not applicable' # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role hydrog1 hydrog ? ? A U 4 N3 ? ? ? 1_555 A A 205 N1 ? ? A U 2 A A 203 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A U 4 O4 ? ? ? 1_555 A A 205 N6 ? ? A U 2 A A 203 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A A 5 N1 ? ? ? 1_555 A U 204 N3 ? ? A A 3 A U 202 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A A 5 N6 ? ? ? 1_555 A U 204 O4 ? ? A A 3 A U 202 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A A 6 N1 ? ? ? 1_555 A U 203 N3 ? ? A A 4 A U 201 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A A 6 N6 ? ? ? 1_555 A U 203 O4 ? ? A A 4 A U 201 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A G 7 N1 ? ? ? 1_555 A C 202 N3 ? ? A G 5 A C 200 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A G 7 N2 ? ? ? 1_555 A C 202 O2 ? ? A G 5 A C 200 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A G 7 O6 ? ? ? 1_555 A C 202 N4 ? ? A G 5 A C 200 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A U 8 N3 ? ? ? 1_555 A A 201 N1 ? ? A U 6 A A 199 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A U 8 O4 ? ? ? 1_555 A A 201 N6 ? ? A U 6 A A 199 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A U 9 N3 ? ? ? 1_555 A A 200 N1 ? ? A U 7 A A 198 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A U 9 O4 ? ? ? 1_555 A A 200 N6 ? ? A U 7 A A 198 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A A 10 N1 ? ? ? 1_555 A U 199 N3 ? ? A A 8 A U 197 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A A 10 N6 ? ? ? 1_555 A U 199 O4 ? ? A A 8 A U 197 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A G 11 N1 ? ? ? 1_555 A C 198 N3 ? ? A G 9 A C 196 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A G 11 N2 ? ? ? 1_555 A C 198 O2 ? ? A G 9 A C 196 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A G 11 O6 ? ? ? 1_555 A C 198 N4 ? ? A G 9 A C 196 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A G 12 N1 ? ? ? 1_555 A G 16 O6 ? ? A G 10 A G 14 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog20 hydrog ? ? A G 12 N2 ? ? ? 1_555 A G 16 N7 ? ? A G 10 A G 14 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? ? hydrog21 hydrog ? ? A G 12 O6 ? ? ? 1_555 A C 195 N4 ? ? A G 10 A C 193 1_555 ? ? ? ? ? ? 'G-C PAIR' ? ? ? hydrog22 hydrog ? ? A U 14 N3 ? ? ? 1_555 A A 197 N1 ? ? A U 12 A A 195 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? A U 14 O4 ? ? ? 1_555 A A 197 N6 ? ? A U 12 A A 195 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? A U 15 N3 ? ? ? 1_555 A A 196 N1 ? ? A U 13 A A 194 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? A U 15 O4 ? ? ? 1_555 A A 196 N6 ? ? A U 13 A A 194 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? A G 16 N1 ? ? ? 1_555 A C 195 N3 ? ? A G 14 A C 193 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? A G 16 N2 ? ? ? 1_555 A C 195 O2 ? ? A G 14 A C 193 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? A G 16 O6 ? ? ? 1_555 A C 195 N4 ? ? A G 14 A C 193 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? A U 17 N3 ? ? ? 1_555 A A 191 N1 ? ? A U 15 A A 189 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? A U 17 O4 ? ? ? 1_555 A A 191 N6 ? ? A U 15 A A 189 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? A G 18 N1 ? ? ? 1_555 A C 190 N3 ? ? A G 16 A C 188 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? A G 18 N2 ? ? ? 1_555 A C 190 O2 ? ? A G 16 A C 188 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? A G 18 O6 ? ? ? 1_555 A C 190 N4 ? ? A G 16 A C 188 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? A G 19 N1 ? ? ? 1_555 A C 189 N3 ? ? A G 17 A C 187 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? A G 19 N2 ? ? ? 1_555 A C 189 O2 ? ? A G 17 A C 187 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? A G 19 O6 ? ? ? 1_555 A C 189 N4 ? ? A G 17 A C 187 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? A U 20 N3 ? ? ? 1_555 A A 188 N1 ? ? A U 18 A A 186 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? A U 20 O4 ? ? ? 1_555 A A 188 N6 ? ? A U 18 A A 186 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? A U 21 N3 ? ? ? 1_555 A A 25 N7 ? ? A U 19 A A 23 1_555 ? ? ? ? ? ? 'REVERSED HOOGSTEEN' ? ? ? hydrog40 hydrog ? ? A U 21 O2 ? ? ? 1_555 A A 25 N6 ? ? A U 19 A A 23 1_555 ? ? ? ? ? ? 'REVERSED HOOGSTEEN' ? ? ? hydrog41 hydrog ? ? A G 22 N2 ? ? ? 1_555 A A 185 N7 ? ? A G 20 A A 183 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog42 hydrog ? ? A G 22 N3 ? ? ? 1_555 A A 185 N6 ? ? A G 20 A A 183 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog43 hydrog ? ? A G 26 N1 ? ? ? 1_555 A U 52 O2 ? ? A G 24 A U 50 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog44 hydrog ? ? A G 26 O6 ? ? ? 1_555 A U 52 N3 ? ? A G 24 A U 50 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog45 hydrog ? ? A U 27 N3 ? ? ? 1_555 A A 51 N1 ? ? A U 25 A A 49 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog46 hydrog ? ? A U 27 O4 ? ? ? 1_555 A A 51 N6 ? ? A U 25 A A 49 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog47 hydrog ? ? A C 28 N3 ? ? ? 1_555 A G 50 N1 ? ? A C 26 A G 48 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog48 hydrog ? ? A C 28 N4 ? ? ? 1_555 A G 50 O6 ? ? A C 26 A G 48 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog49 hydrog ? ? A C 28 O2 ? ? ? 1_555 A G 50 N2 ? ? A C 26 A G 48 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog50 hydrog ? ? A G 29 N3 ? ? ? 1_555 A G 32 N2 ? ? A G 27 A G 30 1_555 ? ? ? ? ? ? 'G-G MISPAIR' ? ? ? hydrog51 hydrog ? ? A G 29 N2 ? ? ? 1_555 A C 33 O2 ? ? A G 27 A C 31 1_555 ? ? ? ? ? ? 'G-C PAIR' ? ? ? hydrog52 hydrog ? ? A G 29 O6 ? ? ? 1_555 A C 49 N4 ? ? A G 27 A C 47 1_555 ? ? ? ? ? ? 'G-C PAIR' ? ? ? hydrog53 hydrog ? ? A A 30 N6 ? ? ? 1_555 A A 47 N1 ? ? A A 28 A A 45 1_555 ? ? ? ? ? ? TYPE_5_PAIR ? ? ? hydrog54 hydrog ? ? A A 30 N7 ? ? ? 1_555 A A 47 N6 ? ? A A 28 A A 45 1_555 ? ? ? ? ? ? TYPE_5_PAIR ? ? ? hydrog55 hydrog ? ? A G 32 N1 ? ? ? 1_555 A C 44 N3 ? ? A G 30 A C 42 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog56 hydrog ? ? A G 32 N2 ? ? ? 1_555 A C 44 O2 ? ? A G 30 A C 42 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog57 hydrog ? ? A G 32 O6 ? ? ? 1_555 A C 44 N4 ? ? A G 30 A C 42 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog58 hydrog ? ? A C 33 N3 ? ? ? 1_555 A G 43 N1 ? ? A C 31 A G 41 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog59 hydrog ? ? A C 33 N4 ? ? ? 1_555 A G 43 O6 ? ? A C 31 A G 41 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog60 hydrog ? ? A C 33 O2 ? ? ? 1_555 A G 43 N2 ? ? A C 31 A G 41 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog61 hydrog ? ? A C 34 N3 ? ? ? 1_555 A G 42 N1 ? ? A C 32 A G 40 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog62 hydrog ? ? A C 34 N4 ? ? ? 1_555 A G 42 O6 ? ? A C 32 A G 40 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog63 hydrog ? ? A C 34 O2 ? ? ? 1_555 A G 42 N2 ? ? A C 32 A G 40 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog64 hydrog ? ? A G 36 N2 ? ? ? 1_555 A A 60 N3 ? ? A G 34 A A 58 1_555 ? ? ? ? ? ? 'G-A MISPAIR' ? ? ? hydrog65 hydrog ? ? A G 36 N1 ? ? ? 1_555 A C 92 N3 ? ? A G 34 A C 90 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog66 hydrog ? ? A G 36 N2 ? ? ? 1_555 A C 92 O2 ? ? A G 34 A C 90 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog67 hydrog ? ? A G 36 O6 ? ? ? 1_555 A C 92 N4 ? ? A G 34 A C 90 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog68 hydrog ? ? A U 37 N3 ? ? ? 1_555 A G 91 O6 ? ? A U 35 A G 89 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog69 hydrog ? ? A U 37 O2 ? ? ? 1_555 A G 91 N1 ? ? A U 35 A G 89 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog70 hydrog ? ? A C 38 N3 ? ? ? 1_555 A G 90 N1 ? ? A C 36 A G 88 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog71 hydrog ? ? A C 38 N4 ? ? ? 1_555 A G 90 O6 ? ? A C 36 A G 88 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog72 hydrog ? ? A C 38 O2 ? ? ? 1_555 A G 90 N2 ? ? A C 36 A G 88 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog73 hydrog ? ? A G 39 N1 ? ? ? 1_555 A C 89 N3 ? ? A G 37 A C 87 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog74 hydrog ? ? A G 39 N2 ? ? ? 1_555 A C 89 O2 ? ? A G 37 A C 87 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog75 hydrog ? ? A G 39 O6 ? ? ? 1_555 A C 89 N4 ? ? A G 37 A C 87 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog76 hydrog ? ? A C 40 N3 ? ? ? 1_555 A G 88 N1 ? ? A C 38 A G 86 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog77 hydrog ? ? A C 40 N4 ? ? ? 1_555 A G 88 O6 ? ? A C 38 A G 86 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog78 hydrog ? ? A C 40 O2 ? ? ? 1_555 A G 88 N2 ? ? A C 38 A G 86 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog79 hydrog ? ? A A 41 N1 ? ? ? 1_555 A U 87 N3 ? ? A A 39 A U 85 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog80 hydrog ? ? A A 41 N6 ? ? ? 1_555 A U 87 O4 ? ? A A 39 A U 85 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog81 hydrog ? ? A G 43 N2 ? ? ? 1_555 A C 49 O2 ? ? A G 41 A C 47 1_555 ? ? ? ? ? ? 'G-C PAIR' ? ? ? hydrog82 hydrog ? ? A C 53 N3 ? ? ? 1_555 A G 179 N1 ? ? A C 51 A G 177 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog83 hydrog ? ? A C 53 N4 ? ? ? 1_555 A G 179 O6 ? ? A C 51 A G 177 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog84 hydrog ? ? A C 53 O2 ? ? ? 1_555 A G 179 N2 ? ? A C 51 A G 177 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog85 hydrog ? ? A C 54 N3 ? ? ? 1_555 A G 178 N1 ? ? A C 52 A G 176 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog86 hydrog ? ? A C 54 N4 ? ? ? 1_555 A G 178 O6 ? ? A C 52 A G 176 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog87 hydrog ? ? A C 54 O2 ? ? ? 1_555 A G 178 N2 ? ? A C 52 A G 176 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog88 hydrog ? ? A A 55 N1 ? ? ? 1_555 A U 177 N3 ? ? A A 53 A U 175 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog89 hydrog ? ? A A 55 N6 ? ? ? 1_555 A U 177 O4 ? ? A A 53 A U 175 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog90 hydrog ? ? A C 56 N3 ? ? ? 1_555 A G 176 N1 ? ? A C 54 A G 174 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog91 hydrog ? ? A C 56 N4 ? ? ? 1_555 A G 176 O6 ? ? A C 54 A G 174 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog92 hydrog ? ? A C 56 O2 ? ? ? 1_555 A G 176 N2 ? ? A C 54 A G 174 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog93 hydrog ? ? A G 57 N1 ? ? ? 1_555 A G 81 O6 ? ? A G 55 A G 79 1_555 ? ? ? ? ? ? TYPE_3_PAIR ? ? ? hydrog94 hydrog ? ? A G 57 O6 ? ? ? 1_555 A G 81 N1 ? ? A G 55 A G 79 1_555 ? ? ? ? ? ? TYPE_3_PAIR ? ? ? hydrog95 hydrog ? ? A U 58 N3 ? ? ? 1_555 A A 80 N7 ? ? A U 56 A A 78 1_555 ? ? ? ? ? ? 'REVERSED HOOGSTEEN' ? ? ? hydrog96 hydrog ? ? A U 58 O2 ? ? ? 1_555 A A 80 N6 ? ? A U 56 A A 78 1_555 ? ? ? ? ? ? 'REVERSED HOOGSTEEN' ? ? ? hydrog97 hydrog ? ? A A 60 N6 ? ? ? 1_555 A G 79 N3 ? ? A A 58 A G 77 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog98 hydrog ? ? A A 60 N7 ? ? ? 1_555 A G 79 N2 ? ? A A 58 A G 77 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog99 hydrog ? ? A G 61 N1 ? ? ? 1_555 A U 78 O2 ? ? A G 59 A U 76 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog100 hydrog ? ? A G 61 O6 ? ? ? 1_555 A U 78 N3 ? ? A G 59 A U 76 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog101 hydrog ? ? A U 62 N3 ? ? ? 1_555 A A 77 N1 ? ? A U 60 A A 75 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog102 hydrog ? ? A U 62 O4 ? ? ? 1_555 A A 77 N6 ? ? A U 60 A A 75 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog103 hydrog ? ? A U 63 N3 ? ? ? 1_555 A A 76 N1 ? ? A U 61 A A 74 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog104 hydrog ? ? A U 63 O4 ? ? ? 1_555 A A 76 N6 ? ? A U 61 A A 74 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog105 hydrog ? ? A A 64 N1 ? ? ? 1_555 A U 75 N3 ? ? A A 62 A U 73 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog106 hydrog ? ? A A 64 N6 ? ? ? 1_555 A U 75 O4 ? ? A A 62 A U 73 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog107 hydrog ? ? A A 65 N1 ? ? ? 1_555 A U 74 N3 ? ? A A 63 A U 72 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog108 hydrog ? ? A A 65 N6 ? ? ? 1_555 A U 74 O4 ? ? A A 63 A U 72 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog109 hydrog ? ? A A 66 N1 ? ? ? 1_555 A U 73 N3 ? ? A A 64 A U 71 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog110 hydrog ? ? A A 66 N6 ? ? ? 1_555 A U 73 O4 ? ? A A 64 A U 71 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog111 hydrog ? ? A C 67 N3 ? ? ? 1_555 A G 71 N1 ? ? A C 65 A G 69 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog112 hydrog ? ? A C 67 N4 ? ? ? 1_555 A G 71 O6 ? ? A C 65 A G 69 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog113 hydrog ? ? A C 67 O2 ? ? ? 1_555 A G 71 N2 ? ? A C 65 A G 69 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog114 hydrog ? ? A C 82 N4 ? ? ? 1_555 A U 177 O4 ? ? A C 80 A U 175 1_555 ? ? ? ? ? ? 'C-U MISPAIR' ? ? ? hydrog115 hydrog ? ? A C 82 N4 ? ? ? 1_555 A G 178 O6 ? ? A C 80 A G 176 1_555 ? ? ? ? ? ? 'C-G PAIR' ? ? ? hydrog116 hydrog ? ? A A 83 N7 ? ? ? 1_555 A G 180 N2 ? ? A A 81 A G 178 1_555 ? ? ? ? ? ? 'A-G MISPAIR' ? ? ? hydrog117 hydrog ? ? A U 84 N3 ? ? ? 1_555 A A 184 N1 ? ? A U 82 A A 182 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog118 hydrog ? ? A U 84 O4 ? ? ? 1_555 A A 184 N6 ? ? A U 82 A A 182 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog119 hydrog ? ? A G 85 N1 ? ? ? 1_555 A C 183 O2 ? ? A G 83 A C 181 1_555 ? ? ? ? ? ? 'G-C PAIR' ? ? ? hydrog120 hydrog ? ? A A 102 N3 ? ? ? 1_555 A G 170 N2 ? ? A A 100 A G 168 1_555 ? ? ? ? ? ? 'A-G MISPAIR' ? ? ? hydrog121 hydrog ? ? A G 103 N1 ? ? ? 1_555 A C 171 N3 ? ? A G 101 A C 169 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog122 hydrog ? ? A G 103 N2 ? ? ? 1_555 A C 171 O2 ? ? A G 101 A C 169 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog123 hydrog ? ? A G 103 O6 ? ? ? 1_555 A C 171 N4 ? ? A G 101 A C 169 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog124 hydrog ? ? A C 105 N3 ? ? ? 1_555 A G 170 N1 ? ? A C 103 A G 168 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog125 hydrog ? ? A C 105 N4 ? ? ? 1_555 A G 170 O6 ? ? A C 103 A G 168 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog126 hydrog ? ? A C 105 O2 ? ? ? 1_555 A G 170 N2 ? ? A C 103 A G 168 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog127 hydrog ? ? A C 106 N3 ? ? ? 1_555 A G 169 N1 ? ? A C 104 A G 167 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog128 hydrog ? ? A C 106 N4 ? ? ? 1_555 A G 169 O6 ? ? A C 104 A G 167 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog129 hydrog ? ? A C 106 O2 ? ? ? 1_555 A G 169 N2 ? ? A C 104 A G 167 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog130 hydrog ? ? A U 107 N3 ? ? ? 1_555 A A 168 N1 ? ? A U 105 A A 166 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog131 hydrog ? ? A U 107 O4 ? ? ? 1_555 A A 168 N6 ? ? A U 105 A A 166 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog132 hydrog ? ? A G 108 N1 ? ? ? 1_555 A C 167 N3 ? ? A G 106 A C 165 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog133 hydrog ? ? A G 108 N2 ? ? ? 1_555 A C 167 O2 ? ? A G 106 A C 165 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog134 hydrog ? ? A G 108 O6 ? ? ? 1_555 A C 167 N4 ? ? A G 106 A C 165 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog135 hydrog ? ? A C 109 N3 ? ? ? 1_555 A G 166 N1 ? ? A C 107 A G 164 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog136 hydrog ? ? A C 109 N4 ? ? ? 1_555 A G 166 O6 ? ? A C 107 A G 164 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog137 hydrog ? ? A C 109 O2 ? ? ? 1_555 A G 166 N2 ? ? A C 107 A G 164 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog138 hydrog ? ? A C 110 N3 ? ? ? 1_555 A G 120 N1 ? ? A C 108 A G 118 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog139 hydrog ? ? A C 110 N4 ? ? ? 1_555 A G 120 O6 ? ? A C 108 A G 118 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog140 hydrog ? ? A C 110 O2 ? ? ? 1_555 A G 120 N2 ? ? A C 108 A G 118 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog141 hydrog ? ? A G 111 N1 ? ? ? 1_555 A C 119 N3 ? ? A G 109 A C 117 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog142 hydrog ? ? A G 111 N2 ? ? ? 1_555 A C 119 O2 ? ? A G 109 A C 117 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog143 hydrog ? ? A G 111 O6 ? ? ? 1_555 A C 119 N4 ? ? A G 109 A C 117 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog144 hydrog ? ? A C 112 N3 ? ? ? 1_555 A G 118 N1 ? ? A C 110 A G 116 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog145 hydrog ? ? A C 112 N4 ? ? ? 1_555 A G 118 O6 ? ? A C 110 A G 116 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog146 hydrog ? ? A C 112 O2 ? ? ? 1_555 A G 118 N2 ? ? A C 110 A G 116 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog147 hydrog ? ? A G 122 N1 ? ? ? 1_555 A C 164 N3 ? ? A G 120 A C 162 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog148 hydrog ? ? A G 122 N2 ? ? ? 1_555 A C 164 O2 ? ? A G 120 A C 162 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog149 hydrog ? ? A G 122 O6 ? ? ? 1_555 A C 164 N4 ? ? A G 120 A C 162 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog150 hydrog ? ? A A 123 N6 ? ? ? 1_555 A G 172 N3 ? ? A A 121 A G 170 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog151 hydrog ? ? A A 123 N7 ? ? ? 1_555 A G 172 N2 ? ? A A 121 A G 170 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog152 hydrog ? ? A G 124 N1 ? ? ? 1_555 A C 163 N3 ? ? A G 122 A C 161 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog153 hydrog ? ? A G 124 N2 ? ? ? 1_555 A C 163 O2 ? ? A G 122 A C 161 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog154 hydrog ? ? A G 124 O6 ? ? ? 1_555 A C 163 N4 ? ? A G 122 A C 161 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog155 hydrog ? ? A U 125 N3 ? ? ? 1_555 A U 162 O2 ? ? A U 123 A U 160 1_555 ? ? ? ? ? ? TYPE_16_PAIR ? ? ? hydrog156 hydrog ? ? A U 125 O4 ? ? ? 1_555 A U 162 N3 ? ? A U 123 A U 160 1_555 ? ? ? ? ? ? TYPE_16_PAIR ? ? ? hydrog157 hydrog ? ? A A 126 N1 ? ? ? 1_555 A U 161 N3 ? ? A A 124 A U 159 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog158 hydrog ? ? A A 126 N6 ? ? ? 1_555 A U 161 O4 ? ? A A 124 A U 159 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog159 hydrog ? ? A U 127 O2 ? ? ? 1_555 A C 160 N4 ? ? A U 125 A C 158 1_555 ? ? ? ? ? ? 'U-C MISPAIR' ? ? ? hydrog160 hydrog ? ? A U 128 O2 ? ? ? 1_555 A A 158 N6 ? ? A U 126 A A 156 1_555 ? ? ? ? ? ? 'U-A PAIR' ? ? ? hydrog161 hydrog ? ? A U 128 O2 ? ? ? 1_555 A A 159 N6 ? ? A U 126 A A 157 1_555 ? ? ? ? ? ? 'U-A PAIR' ? ? ? hydrog162 hydrog ? ? A A 129 N6 ? ? ? 1_555 A A 158 N7 ? ? A A 127 A A 156 1_555 ? ? ? ? ? ? TYPE_2_PAIR ? ? ? hydrog163 hydrog ? ? A A 129 N7 ? ? ? 1_555 A A 158 N6 ? ? A A 127 A A 156 1_555 ? ? ? ? ? ? TYPE_2_PAIR ? ? ? hydrog164 hydrog ? ? A U 131 N3 ? ? ? 1_555 A A 157 N7 ? ? A U 129 A A 155 1_555 ? ? ? ? ? ? 'REVERSED HOOGSTEEN' ? ? ? hydrog165 hydrog ? ? A U 131 O2 ? ? ? 1_555 A A 157 N6 ? ? A U 129 A A 155 1_555 ? ? ? ? ? ? 'REVERSED HOOGSTEEN' ? ? ? hydrog166 hydrog ? ? A A 132 N6 ? ? ? 1_555 A G 156 N3 ? ? A A 130 A G 154 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog167 hydrog ? ? A A 132 N7 ? ? ? 1_555 A G 156 N2 ? ? A A 130 A G 154 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog168 hydrog ? ? A G 133 N1 ? ? ? 1_555 A C 155 N3 ? ? A G 131 A C 153 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog169 hydrog ? ? A G 133 N2 ? ? ? 1_555 A C 155 O2 ? ? A G 131 A C 153 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog170 hydrog ? ? A G 133 O6 ? ? ? 1_555 A C 155 N4 ? ? A G 131 A C 153 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog171 hydrog ? ? A U 134 N3 ? ? ? 1_555 A G 154 O6 ? ? A U 132 A G 152 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog172 hydrog ? ? A U 134 O2 ? ? ? 1_555 A G 154 N1 ? ? A U 132 A G 152 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog173 hydrog ? ? A G 135 N2 ? ? ? 1_555 A A 153 N7 ? ? A G 133 A A 151 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog174 hydrog ? ? A G 135 N3 ? ? ? 1_555 A A 153 N6 ? ? A G 133 A A 151 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog175 hydrog ? ? A A 136 N6 ? ? ? 1_555 A U 152 O2 ? ? A A 134 A U 150 1_555 ? ? ? ? ? ? 'REVERSED HOOGSTEEN' ? ? ? hydrog176 hydrog ? ? A A 136 N7 ? ? ? 1_555 A U 152 N3 ? ? A A 134 A U 150 1_555 ? ? ? ? ? ? 'REVERSED HOOGSTEEN' ? ? ? hydrog177 hydrog ? ? A G 137 N7 ? ? ? 1_555 A G 150 N1 ? ? A G 135 A G 148 1_555 ? ? ? ? ? ? TYPE_7_PAIR ? ? ? hydrog178 hydrog ? ? A G 137 O6 ? ? ? 1_555 A G 150 N2 ? ? A G 135 A G 148 1_555 ? ? ? ? ? ? TYPE_7_PAIR ? ? ? hydrog179 hydrog ? ? A A 138 N6 ? ? ? 1_555 A G 149 N3 ? ? A A 136 A G 147 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog180 hydrog ? ? A A 138 N7 ? ? ? 1_555 A G 149 N2 ? ? A A 136 A G 147 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog181 hydrog ? ? A G 139 N1 ? ? ? 1_555 A C 148 N3 ? ? A G 137 A C 146 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog182 hydrog ? ? A G 139 N2 ? ? ? 1_555 A C 148 O2 ? ? A G 137 A C 146 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog183 hydrog ? ? A G 139 O6 ? ? ? 1_555 A C 148 N4 ? ? A G 137 A C 146 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog184 hydrog ? ? A G 140 N1 ? ? ? 1_555 A C 147 N3 ? ? A G 138 A C 145 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog185 hydrog ? ? A G 140 N2 ? ? ? 1_555 A C 147 O2 ? ? A G 138 A C 145 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog186 hydrog ? ? A G 140 O6 ? ? ? 1_555 A C 147 N4 ? ? A G 138 A C 145 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog187 hydrog ? ? A G 141 N1 ? ? ? 1_555 A U 146 O4 ? ? A G 139 A U 144 1_555 ? ? ? ? ? ? 'G-U MISPAIR' ? ? ? hydrog188 hydrog ? ? A G 181 N2 ? ? ? 1_555 A A 186 N1 ? ? A G 179 A A 184 1_555 ? ? ? ? ? ? TYPE_10_PAIR ? ? ? hydrog189 hydrog ? ? A G 181 N3 ? ? ? 1_555 A A 186 N6 ? ? A G 179 A A 184 1_555 ? ? ? ? ? ? TYPE_10_PAIR ? ? ? # _struct_conn_type.id hydrog _struct_conn_type.criteria ? _struct_conn_type.reference ? # _pdbx_entry_details.entry_id 9ELY _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_ligand_of_interest ? _pdbx_entry_details.has_protein_modification N # _em_3d_fitting.id 1 _em_3d_fitting.entry_id 9ELY _em_3d_fitting.method ? _em_3d_fitting.target_criteria ? _em_3d_fitting.details ? _em_3d_fitting.overall_b_value ? _em_3d_fitting.ref_space REAL _em_3d_fitting.ref_protocol 'AB INITIO MODEL' # _em_3d_reconstruction.entry_id 9ELY _em_3d_reconstruction.id 1 _em_3d_reconstruction.method ? _em_3d_reconstruction.algorithm 'FOURIER SPACE' _em_3d_reconstruction.citation_id ? _em_3d_reconstruction.details ? _em_3d_reconstruction.resolution 2.9 _em_3d_reconstruction.resolution_method 'FSC 0.143 CUT-OFF' _em_3d_reconstruction.magnification_calibration ? _em_3d_reconstruction.nominal_pixel_size ? _em_3d_reconstruction.actual_pixel_size ? _em_3d_reconstruction.num_particles 318464 _em_3d_reconstruction.euler_angles_details ? _em_3d_reconstruction.num_class_averages 1 _em_3d_reconstruction.refinement_type ? _em_3d_reconstruction.image_processing_id 1 _em_3d_reconstruction.symmetry_type POINT # _em_buffer.id 1 _em_buffer.specimen_id 1 _em_buffer.name ? _em_buffer.details ? _em_buffer.pH 8.0 # _em_entity_assembly.id 1 _em_entity_assembly.parent_id 0 _em_entity_assembly.source NATURAL _em_entity_assembly.type COMPLEX _em_entity_assembly.name 'raiA RNA - Clostridium acetobutylicum' _em_entity_assembly.details ? _em_entity_assembly.synonym ? _em_entity_assembly.oligomeric_details ? _em_entity_assembly.entity_id_list 1 # _em_imaging.entry_id 9ELY _em_imaging.id 1 _em_imaging.astigmatism ? _em_imaging.electron_beam_tilt_params ? _em_imaging.residual_tilt ? _em_imaging.microscope_model 'TFS KRIOS' _em_imaging.specimen_holder_type ? _em_imaging.specimen_holder_model 'FEI TITAN KRIOS AUTOGRID HOLDER' _em_imaging.details ? _em_imaging.date ? _em_imaging.accelerating_voltage 300 _em_imaging.illumination_mode 'FLOOD BEAM' _em_imaging.mode 'BRIGHT FIELD' _em_imaging.nominal_cs 2.7 _em_imaging.nominal_defocus_min 600 _em_imaging.nominal_defocus_max 2000 _em_imaging.calibrated_defocus_min ? _em_imaging.calibrated_defocus_max ? _em_imaging.tilt_angle_min ? _em_imaging.tilt_angle_max ? _em_imaging.nominal_magnification 105000 _em_imaging.calibrated_magnification ? _em_imaging.electron_source 'FIELD EMISSION GUN' _em_imaging.citation_id ? _em_imaging.temperature ? _em_imaging.detector_distance ? _em_imaging.recording_temperature_minimum ? _em_imaging.recording_temperature_maximum ? _em_imaging.alignment_procedure ? _em_imaging.c2_aperture_diameter 70 _em_imaging.specimen_id 1 _em_imaging.cryogen NITROGEN # _em_sample_support.id 1 _em_sample_support.film_material ? _em_sample_support.method ? _em_sample_support.grid_material COPPER _em_sample_support.grid_mesh_size 200 _em_sample_support.grid_type 'Quantifoil R1.2/1.3' _em_sample_support.details ? _em_sample_support.specimen_id 1 _em_sample_support.citation_id ? # _em_vitrification.entry_id 9ELY _em_vitrification.id 1 _em_vitrification.specimen_id 1 _em_vitrification.cryogen_name ETHANE _em_vitrification.humidity 100 _em_vitrification.temp ? _em_vitrification.chamber_temperature 278 _em_vitrification.instrument 'FEI VITROBOT MARK IV' _em_vitrification.method ? _em_vitrification.time_resolved_state ? _em_vitrification.citation_id ? _em_vitrification.details ? # _em_experiment.entry_id 9ELY _em_experiment.id 1 _em_experiment.reconstruction_method 'SINGLE PARTICLE' _em_experiment.aggregation_state PARTICLE _em_experiment.entity_assembly_id 1 # _em_single_particle_entity.entry_id 9ELY _em_single_particle_entity.id 1 _em_single_particle_entity.image_processing_id 1 _em_single_particle_entity.point_symmetry C1 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A G -1 ? A G 1 2 1 Y 1 A G 0 ? A G 2 3 1 Y 1 A U 1 ? A U 3 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal A OP3 O N N 1 A P P N N 2 A OP1 O N N 3 A OP2 O N N 4 A "O5'" O N N 5 A "C5'" C N N 6 A "C4'" C N R 7 A "O4'" O N N 8 A "C3'" C N S 9 A "O3'" O N N 10 A "C2'" C N R 11 A "O2'" O N N 12 A "C1'" C N R 13 A N9 N Y N 14 A C8 C Y N 15 A N7 N Y N 16 A C5 C Y N 17 A C6 C Y N 18 A N6 N N N 19 A N1 N Y N 20 A C2 C Y N 21 A N3 N Y N 22 A C4 C Y N 23 A HOP3 H N N 24 A HOP2 H N N 25 A "H5'" H N N 26 A "H5''" H N N 27 A "H4'" H N N 28 A "H3'" H N N 29 A "HO3'" H N N 30 A "H2'" H N N 31 A "HO2'" H N N 32 A "H1'" H N N 33 A H8 H N N 34 A H61 H N N 35 A H62 H N N 36 A H2 H N N 37 C OP3 O N N 38 C P P N N 39 C OP1 O N N 40 C OP2 O N N 41 C "O5'" O N N 42 C "C5'" C N N 43 C "C4'" C N R 44 C "O4'" O N N 45 C "C3'" C N S 46 C "O3'" O N N 47 C "C2'" C N R 48 C "O2'" O N N 49 C "C1'" C N R 50 C N1 N N N 51 C C2 C N N 52 C O2 O N N 53 C N3 N N N 54 C C4 C N N 55 C N4 N N N 56 C C5 C N N 57 C C6 C N N 58 C HOP3 H N N 59 C HOP2 H N N 60 C "H5'" H N N 61 C "H5''" H N N 62 C "H4'" H N N 63 C "H3'" H N N 64 C "HO3'" H N N 65 C "H2'" H N N 66 C "HO2'" H N N 67 C "H1'" H N N 68 C H41 H N N 69 C H42 H N N 70 C H5 H N N 71 C H6 H N N 72 G OP3 O N N 73 G P P N N 74 G OP1 O N N 75 G OP2 O N N 76 G "O5'" O N N 77 G "C5'" C N N 78 G "C4'" C N R 79 G "O4'" O N N 80 G "C3'" C N S 81 G "O3'" O N N 82 G "C2'" C N R 83 G "O2'" O N N 84 G "C1'" C N R 85 G N9 N Y N 86 G C8 C Y N 87 G N7 N Y N 88 G C5 C Y N 89 G C6 C N N 90 G O6 O N N 91 G N1 N N N 92 G C2 C N N 93 G N2 N N N 94 G N3 N N N 95 G C4 C Y N 96 G HOP3 H N N 97 G HOP2 H N N 98 G "H5'" H N N 99 G "H5''" H N N 100 G "H4'" H N N 101 G "H3'" H N N 102 G "HO3'" H N N 103 G "H2'" H N N 104 G "HO2'" H N N 105 G "H1'" H N N 106 G H8 H N N 107 G H1 H N N 108 G H21 H N N 109 G H22 H N N 110 U OP3 O N N 111 U P P N N 112 U OP1 O N N 113 U OP2 O N N 114 U "O5'" O N N 115 U "C5'" C N N 116 U "C4'" C N R 117 U "O4'" O N N 118 U "C3'" C N S 119 U "O3'" O N N 120 U "C2'" C N R 121 U "O2'" O N N 122 U "C1'" C N R 123 U N1 N N N 124 U C2 C N N 125 U O2 O N N 126 U N3 N N N 127 U C4 C N N 128 U O4 O N N 129 U C5 C N N 130 U C6 C N N 131 U HOP3 H N N 132 U HOP2 H N N 133 U "H5'" H N N 134 U "H5''" H N N 135 U "H4'" H N N 136 U "H3'" H N N 137 U "HO3'" H N N 138 U "H2'" H N N 139 U "HO2'" H N N 140 U "H1'" H N N 141 U H3 H N N 142 U H5 H N N 143 U H6 H N N 144 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A OP3 P sing N N 1 A OP3 HOP3 sing N N 2 A P OP1 doub N N 3 A P OP2 sing N N 4 A P "O5'" sing N N 5 A OP2 HOP2 sing N N 6 A "O5'" "C5'" sing N N 7 A "C5'" "C4'" sing N N 8 A "C5'" "H5'" sing N N 9 A "C5'" "H5''" sing N N 10 A "C4'" "O4'" sing N N 11 A "C4'" "C3'" sing N N 12 A "C4'" "H4'" sing N N 13 A "O4'" "C1'" sing N N 14 A "C3'" "O3'" sing N N 15 A "C3'" "C2'" sing N N 16 A "C3'" "H3'" sing N N 17 A "O3'" "HO3'" sing N N 18 A "C2'" "O2'" sing N N 19 A "C2'" "C1'" sing N N 20 A "C2'" "H2'" sing N N 21 A "O2'" "HO2'" sing N N 22 A "C1'" N9 sing N N 23 A "C1'" "H1'" sing N N 24 A N9 C8 sing Y N 25 A N9 C4 sing Y N 26 A C8 N7 doub Y N 27 A C8 H8 sing N N 28 A N7 C5 sing Y N 29 A C5 C6 sing Y N 30 A C5 C4 doub Y N 31 A C6 N6 sing N N 32 A C6 N1 doub Y N 33 A N6 H61 sing N N 34 A N6 H62 sing N N 35 A N1 C2 sing Y N 36 A C2 N3 doub Y N 37 A C2 H2 sing N N 38 A N3 C4 sing Y N 39 C OP3 P sing N N 40 C OP3 HOP3 sing N N 41 C P OP1 doub N N 42 C P OP2 sing N N 43 C P "O5'" sing N N 44 C OP2 HOP2 sing N N 45 C "O5'" "C5'" sing N N 46 C "C5'" "C4'" sing N N 47 C "C5'" "H5'" sing N N 48 C "C5'" "H5''" sing N N 49 C "C4'" "O4'" sing N N 50 C "C4'" "C3'" sing N N 51 C "C4'" "H4'" sing N N 52 C "O4'" "C1'" sing N N 53 C "C3'" "O3'" sing N N 54 C "C3'" "C2'" sing N N 55 C "C3'" "H3'" sing N N 56 C "O3'" "HO3'" sing N N 57 C "C2'" "O2'" sing N N 58 C "C2'" "C1'" sing N N 59 C "C2'" "H2'" sing N N 60 C "O2'" "HO2'" sing N N 61 C "C1'" N1 sing N N 62 C "C1'" "H1'" sing N N 63 C N1 C2 sing N N 64 C N1 C6 sing N N 65 C C2 O2 doub N N 66 C C2 N3 sing N N 67 C N3 C4 doub N N 68 C C4 N4 sing N N 69 C C4 C5 sing N N 70 C N4 H41 sing N N 71 C N4 H42 sing N N 72 C C5 C6 doub N N 73 C C5 H5 sing N N 74 C C6 H6 sing N N 75 G OP3 P sing N N 76 G OP3 HOP3 sing N N 77 G P OP1 doub N N 78 G P OP2 sing N N 79 G P "O5'" sing N N 80 G OP2 HOP2 sing N N 81 G "O5'" "C5'" sing N N 82 G "C5'" "C4'" sing N N 83 G "C5'" "H5'" sing N N 84 G "C5'" "H5''" sing N N 85 G "C4'" "O4'" sing N N 86 G "C4'" "C3'" sing N N 87 G "C4'" "H4'" sing N N 88 G "O4'" "C1'" sing N N 89 G "C3'" "O3'" sing N N 90 G "C3'" "C2'" sing N N 91 G "C3'" "H3'" sing N N 92 G "O3'" "HO3'" sing N N 93 G "C2'" "O2'" sing N N 94 G "C2'" "C1'" sing N N 95 G "C2'" "H2'" sing N N 96 G "O2'" "HO2'" sing N N 97 G "C1'" N9 sing N N 98 G "C1'" "H1'" sing N N 99 G N9 C8 sing Y N 100 G N9 C4 sing Y N 101 G C8 N7 doub Y N 102 G C8 H8 sing N N 103 G N7 C5 sing Y N 104 G C5 C6 sing N N 105 G C5 C4 doub Y N 106 G C6 O6 doub N N 107 G C6 N1 sing N N 108 G N1 C2 sing N N 109 G N1 H1 sing N N 110 G C2 N2 sing N N 111 G C2 N3 doub N N 112 G N2 H21 sing N N 113 G N2 H22 sing N N 114 G N3 C4 sing N N 115 U OP3 P sing N N 116 U OP3 HOP3 sing N N 117 U P OP1 doub N N 118 U P OP2 sing N N 119 U P "O5'" sing N N 120 U OP2 HOP2 sing N N 121 U "O5'" "C5'" sing N N 122 U "C5'" "C4'" sing N N 123 U "C5'" "H5'" sing N N 124 U "C5'" "H5''" sing N N 125 U "C4'" "O4'" sing N N 126 U "C4'" "C3'" sing N N 127 U "C4'" "H4'" sing N N 128 U "O4'" "C1'" sing N N 129 U "C3'" "O3'" sing N N 130 U "C3'" "C2'" sing N N 131 U "C3'" "H3'" sing N N 132 U "O3'" "HO3'" sing N N 133 U "C2'" "O2'" sing N N 134 U "C2'" "C1'" sing N N 135 U "C2'" "H2'" sing N N 136 U "O2'" "HO2'" sing N N 137 U "C1'" N1 sing N N 138 U "C1'" "H1'" sing N N 139 U N1 C2 sing N N 140 U N1 C6 sing N N 141 U C2 O2 doub N N 142 U C2 N3 sing N N 143 U N3 C4 sing N N 144 U N3 H3 sing N N 145 U C4 O4 doub N N 146 U C4 C5 sing N N 147 U C5 C6 doub N N 148 U C5 H5 sing N N 149 U C6 H6 sing N N 150 # _em_admin.current_status REL _em_admin.deposition_date 2024-12-05 _em_admin.deposition_site RCSB _em_admin.entry_id 9ELY _em_admin.last_update 2025-07-30 _em_admin.map_release_date 2025-04-23 _em_admin.title 'raiA RNA motif (Clostridium acetobutylicum)' # loop_ _em_buffer_component.buffer_id _em_buffer_component.concentration _em_buffer_component.concentration_units _em_buffer_component.formula _em_buffer_component.id _em_buffer_component.name 1 50 mM ? 1 'Sodium HEPES' 1 10 mM MgCl2 2 'Magnesium Chloride' # _em_ctf_correction.details ? _em_ctf_correction.em_image_processing_id 1 _em_ctf_correction.id 1 _em_ctf_correction.type 'PHASE FLIPPING AND AMPLITUDE CORRECTION' # _em_entity_assembly_molwt.entity_assembly_id 1 _em_entity_assembly_molwt.experimental_flag NO _em_entity_assembly_molwt.id 1 _em_entity_assembly_molwt.units MEGADALTONS _em_entity_assembly_molwt.value 0.067 # _em_entity_assembly_naturalsource.cell ? _em_entity_assembly_naturalsource.cellular_location ? _em_entity_assembly_naturalsource.entity_assembly_id 1 _em_entity_assembly_naturalsource.id 2 _em_entity_assembly_naturalsource.ncbi_tax_id 272562 _em_entity_assembly_naturalsource.organism 'Clostridium acetobutylicum ATCC 824' _em_entity_assembly_naturalsource.organelle ? _em_entity_assembly_naturalsource.organ ? _em_entity_assembly_naturalsource.strain ? _em_entity_assembly_naturalsource.tissue ? _em_entity_assembly_naturalsource.details ? # _em_image_processing.details ? _em_image_processing.id 1 _em_image_processing.image_recording_id 1 # _em_image_recording.average_exposure_time 1.65 _em_image_recording.avg_electron_dose_per_subtomogram ? _em_image_recording.avg_electron_dose_per_image 60 _em_image_recording.details ? _em_image_recording.detector_mode ? _em_image_recording.film_or_detector_model 'GATAN K3 BIOQUANTUM (6k x 4k)' _em_image_recording.id 1 _em_image_recording.imaging_id 1 _em_image_recording.num_diffraction_images ? _em_image_recording.num_grids_imaged ? _em_image_recording.num_real_images 10825 # _em_imaging_optics.chr_aberration_corrector ? _em_imaging_optics.energyfilter_lower ? _em_imaging_optics.energyfilter_slit_width 20 _em_imaging_optics.energyfilter_name 'GIF Bioquantum' _em_imaging_optics.energyfilter_upper ? _em_imaging_optics.id 1 _em_imaging_optics.imaging_id 1 _em_imaging_optics.phase_plate ? _em_imaging_optics.sph_aberration_corrector ? _em_imaging_optics.details ? # _em_particle_selection.details ? _em_particle_selection.id 1 _em_particle_selection.image_processing_id 1 _em_particle_selection.method ? _em_particle_selection.num_particles_selected 2669865 _em_particle_selection.reference_model ? # loop_ _em_software.category _em_software.details _em_software.id _em_software.image_processing_id _em_software.fitting_id _em_software.imaging_id _em_software.name _em_software.version 'PARTICLE SELECTION' 'Template picker' 1 1 ? ? cryoSPARC 4.5.3 'PARTICLE SELECTION' '1 rounds of 2D classification' 2 1 ? ? cryoSPARC 4.5.3 'PARTICLE SELECTION' 'Ab Initio reconstruction multiclass' 3 1 ? ? cryoSPARC 4.5.3 'IMAGE ACQUISITION' ? 4 ? ? 1 EPU ? MASKING ? 5 ? ? ? ? ? 'CTF CORRECTION' ? 6 1 ? ? cryoSPARC 4.5.3 'LAYERLINE INDEXING' ? 7 ? ? ? ? ? 'DIFFRACTION INDEXING' ? 8 ? ? ? ? ? 'MODEL FITTING' ModelAngelo 9 ? 1 ? RELION 5 'MODEL FITTING' DRRAFTER 10 ? 1 ? Rosetta 3.10 OTHER ? 11 ? ? ? ? ? 'INITIAL EULER ASSIGNMENT' 'Ab Initio reconstruction multiclass' 12 1 ? ? cryoSPARC 4.5.3 'FINAL EULER ASSIGNMENT' 'Non-uniform Refinement' 13 1 ? ? cryoSPARC 4.5.3 CLASSIFICATION ? 14 1 ? ? ? ? RECONSTRUCTION 'Non-uniform Refinement' 15 1 ? ? cryoSPARC 4.5.3 'MODEL REFINEMENT' real_space_refine 16 ? 1 ? PHENIX 1.21 'MODEL REFINEMENT' DRRAFTER 17 ? 1 ? Rosetta 3.10 'MODEL REFINEMENT' ? 18 ? 1 ? ISOLDE 1,8 'MODEL REFINEMENT' ? 19 ? 1 ? Coot 0.9.8 # _em_specimen.concentration 1.3 _em_specimen.details ? _em_specimen.embedding_applied NO _em_specimen.experiment_id 1 _em_specimen.id 1 _em_specimen.shadowing_applied NO _em_specimen.staining_applied NO _em_specimen.vitrification_applied YES # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 9ELY 'double helix' 9ELY 'a-form double helix' 9ELY 'hairpin loop' 9ELY 'bulge loop' 9ELY 'mismatched base pair' 9ELY 'triple helix' 9ELY 'three-way junction' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A U 4 1_555 A A 205 1_555 -0.035 -0.109 -0.419 0.009 -3.739 -1.451 1 A_U2:A203_A A 2 ? A 203 ? 20 1 1 A A 5 1_555 A U 204 1_555 0.049 -0.142 0.161 -7.302 -8.976 -3.963 2 A_A3:U202_A A 3 ? A 202 ? 20 1 1 A A 6 1_555 A U 203 1_555 -0.059 -0.155 -0.149 -7.993 -22.749 -9.456 3 A_A4:U201_A A 4 ? A 201 ? 20 1 1 A G 7 1_555 A C 202 1_555 -0.292 -0.281 0.425 4.164 -14.362 -4.886 4 A_G5:C200_A A 5 ? A 200 ? 19 1 1 A U 8 1_555 A A 201 1_555 -0.088 -0.133 0.098 -0.023 -14.690 -5.638 5 A_U6:A199_A A 6 ? A 199 ? 20 1 1 A U 9 1_555 A A 200 1_555 -0.061 -0.047 -0.070 1.890 -13.482 -7.429 6 A_U7:A198_A A 7 ? A 198 ? 20 1 1 A A 10 1_555 A U 199 1_555 -0.012 -0.076 0.217 -1.778 -11.990 -7.305 7 A_A8:U197_A A 8 ? A 197 ? 20 1 1 A G 11 1_555 A C 198 1_555 -0.051 -0.112 0.307 3.760 -13.586 -5.374 8 A_G9:C196_A A 9 ? A 196 ? 19 1 1 A U 14 1_555 A A 197 1_555 0.089 -0.077 -0.339 -2.899 -14.814 6.076 9 A_U12:A195_A A 12 ? A 195 ? 20 1 1 A U 15 1_555 A A 196 1_555 0.089 -0.042 0.197 -8.315 -1.499 -1.697 10 A_U13:A194_A A 13 ? A 194 ? 20 1 1 A G 16 1_555 A C 195 1_555 -0.074 -0.164 0.412 13.192 -6.470 -4.306 11 A_G14:C193_A A 14 ? A 193 ? 19 1 1 A U 17 1_555 A A 191 1_555 -0.187 0.013 -0.418 2.809 -9.963 -2.305 12 A_U15:A189_A A 15 ? A 189 ? 20 1 1 A G 18 1_555 A C 190 1_555 -0.108 -0.027 0.011 -7.123 -6.994 -0.730 13 A_G16:C188_A A 16 ? A 188 ? 19 1 1 A G 19 1_555 A C 189 1_555 -0.251 -0.158 -0.053 -3.340 -14.728 -1.511 14 A_G17:C187_A A 17 ? A 187 ? 19 1 1 A U 20 1_555 A A 188 1_555 -0.003 -0.009 -0.265 -8.352 -17.668 -7.471 15 A_U18:A186_A A 18 ? A 186 ? 20 1 1 A U 21 1_555 A A 25 1_555 4.177 -1.341 0.402 1.105 17.750 -103.098 16 A_U19:A23_A A 19 ? A 23 ? 24 4 1 A G 22 1_555 A A 185 1_555 6.547 -3.853 0.629 18.213 26.870 -2.947 17 A_G20:A183_A A 20 ? A 183 ? 11 9 1 A G 26 1_555 A U 52 1_555 -2.029 -0.378 0.713 7.086 -8.568 -4.079 18 A_G24:U50_A A 24 ? A 50 ? 28 1 1 A U 27 1_555 A A 51 1_555 -0.026 -0.078 0.057 -2.645 -23.463 -4.665 19 A_U25:A49_A A 25 ? A 49 ? 20 1 1 A C 28 1_555 A G 50 1_555 -0.111 0.032 0.469 -9.281 -12.211 -7.521 20 A_C26:G48_A A 26 ? A 48 ? 19 1 1 A G 29 1_555 A C 49 1_555 1.442 0.545 0.863 9.764 -4.199 -18.460 21 A_G27:C47_A A 27 ? A 47 ? ? ? 1 A A 30 1_555 A A 47 1_555 -4.340 0.809 1.804 -5.051 41.736 -100.619 22 A_A28:A45_A A 28 ? A 45 ? 5 4 1 A G 32 1_555 A C 44 1_555 -0.184 0.001 -0.072 -3.776 2.620 -6.178 23 A_G30:C42_A A 30 ? A 42 ? 19 1 1 A C 33 1_555 A G 43 1_555 0.122 -0.053 -0.231 2.793 -5.266 -6.711 24 A_C31:G41_A A 31 ? A 41 ? 19 1 1 A C 34 1_555 A G 42 1_555 0.246 0.023 -0.131 0.679 1.626 -3.306 25 A_C32:G40_A A 32 ? A 40 ? 19 1 1 A U 87 1_555 A A 41 1_555 -0.482 0.217 -0.515 8.353 -5.565 -3.123 26 A_U85:A39_A A 85 ? A 39 ? 20 1 1 A G 88 1_555 A C 40 1_555 -0.239 -0.075 0.020 0.242 -4.651 -2.428 27 A_G86:C38_A A 86 ? A 38 ? 19 1 1 A C 89 1_555 A G 39 1_555 0.064 -0.078 -0.033 7.894 -8.133 -5.331 28 A_C87:G37_A A 87 ? A 37 ? 19 1 1 A G 90 1_555 A C 38 1_555 -0.208 -0.194 0.059 3.218 -14.606 -0.405 29 A_G88:C36_A A 88 ? A 36 ? 19 1 1 A G 91 1_555 A U 37 1_555 -1.887 -0.469 -0.083 -4.452 -20.770 -5.646 30 A_G89:U35_A A 89 ? A 35 ? 28 1 1 A C 92 1_555 A G 36 1_555 0.446 -0.125 0.300 -1.643 -19.030 -10.249 31 A_C90:G34_A A 90 ? A 34 ? 19 1 1 A G 71 1_555 A C 67 1_555 -0.059 -0.556 -1.650 -23.532 1.487 -12.764 32 A_G69:C65_A A 69 ? A 65 ? 19 1 1 A U 73 1_555 A A 66 1_555 -0.148 -0.132 0.474 -0.483 -21.152 -16.068 33 A_U71:A64_A A 71 ? A 64 ? 20 1 1 A U 74 1_555 A A 65 1_555 0.036 0.018 0.120 2.622 -19.352 -13.374 34 A_U72:A63_A A 72 ? A 63 ? 20 1 1 A U 75 1_555 A A 64 1_555 -0.120 0.007 0.011 6.979 -14.049 -10.126 35 A_U73:A62_A A 73 ? A 62 ? 20 1 1 A A 76 1_555 A U 63 1_555 -0.059 -0.048 -0.042 0.817 -13.952 -7.370 36 A_A74:U61_A A 74 ? A 61 ? 20 1 1 A A 77 1_555 A U 62 1_555 0.171 0.028 -0.201 -2.655 -19.444 -6.402 37 A_A75:U60_A A 75 ? A 60 ? 20 1 1 A U 78 1_555 A G 61 1_555 2.234 -0.267 0.045 -5.159 -16.731 0.875 38 A_U76:G59_A A 76 ? A 59 ? 28 1 1 A G 79 1_555 A A 60 1_555 6.716 -3.989 0.166 -12.468 -12.664 -7.885 39 A_G77:A58_A A 77 ? A 58 ? 11 10 1 A A 80 1_555 A U 58 1_555 -4.248 -1.788 -0.109 1.183 -10.008 -100.225 40 A_A78:U56_A A 78 ? A 56 ? 24 4 1 A G 81 1_555 A G 57 1_555 1.335 1.103 -0.301 -35.164 10.299 -179.391 41 A_G79:G55_A A 79 ? A 55 ? 3 2 1 A G 176 1_555 A C 56 1_555 -0.280 -0.092 0.049 1.563 -13.781 -0.188 42 A_G174:C54_A A 174 ? A 54 ? 19 1 1 A U 177 1_555 A A 55 1_555 -0.065 -0.097 -0.104 3.934 -12.317 -0.238 43 A_U175:A53_A A 175 ? A 53 ? 20 1 1 A G 178 1_555 A C 54 1_555 -0.071 -0.085 -0.257 -5.458 -8.433 0.928 44 A_G176:C52_A A 176 ? A 52 ? 19 1 1 A G 179 1_555 A C 53 1_555 0.094 0.257 -0.469 -15.444 -11.541 -1.237 45 A_G177:C51_A A 177 ? A 51 ? 19 1 1 A G 180 1_555 A A 83 1_555 7.885 -3.698 0.079 -3.395 10.205 -66.242 46 A_G178:A81_A A 178 ? A 81 ? ? ? 1 A G 181 1_555 A A 186 1_555 3.540 -3.706 0.087 4.274 16.681 -69.849 47 A_G179:A184_A A 179 ? A 184 ? 10 6 1 A A 184 1_555 A U 84 1_555 -0.168 -0.086 -1.154 -31.156 9.409 -3.608 48 A_A182:U82_A A 182 ? A 82 ? 20 1 1 A C 183 1_555 A G 85 1_555 2.574 -0.112 -0.373 -10.445 8.238 -14.904 49 A_C181:G83_A A 181 ? A 83 ? ? ? 1 A A 123 1_555 A G 172 1_555 -6.910 -3.642 -0.103 20.782 -5.072 -11.585 50 A_A121:G170_A A 121 ? A 170 ? 11 10 1 A G 103 1_555 A C 171 1_555 -0.498 0.016 -0.704 0.120 -13.846 12.649 51 A_G101:C169_A A 101 ? A 169 ? 19 1 1 A C 105 1_555 A G 170 1_555 -0.098 0.274 -0.192 12.084 -12.783 -1.850 52 A_C103:G168_A A 103 ? A 168 ? 19 1 1 A C 106 1_555 A G 169 1_555 -0.131 -0.033 0.077 3.372 -11.954 -4.379 53 A_C104:G167_A A 104 ? A 167 ? 19 1 1 A U 107 1_555 A A 168 1_555 -0.149 0.081 -0.060 0.418 -13.271 -9.033 54 A_U105:A166_A A 105 ? A 166 ? 20 1 1 A G 108 1_555 A C 167 1_555 0.151 0.123 0.075 -3.550 -11.579 -11.116 55 A_G106:C165_A A 106 ? A 165 ? 19 1 1 A C 109 1_555 A G 166 1_555 0.161 -0.115 -0.095 19.360 -14.774 -2.512 56 A_C107:G164_A A 107 ? A 164 ? 19 1 1 A C 110 1_555 A G 120 1_555 0.073 -0.123 0.047 -0.398 -10.517 -2.267 57 A_C108:G118_A A 108 ? A 118 ? 19 1 1 A G 111 1_555 A C 119 1_555 -0.095 -0.132 -0.014 -0.012 -6.346 -2.599 58 A_G109:C117_A A 109 ? A 117 ? 19 1 1 A C 112 1_555 A G 118 1_555 0.423 -0.214 -0.208 5.351 -7.602 -2.469 59 A_C110:G116_A A 110 ? A 116 ? 19 1 1 A G 122 1_555 A C 164 1_555 -0.378 -0.139 0.398 -1.676 10.282 4.197 60 A_G120:C162_A A 120 ? A 162 ? 19 1 1 A G 124 1_555 A C 163 1_555 -0.044 -0.105 0.091 14.560 -7.727 -3.308 61 A_G122:C161_A A 122 ? A 161 ? 19 1 1 A U 125 1_555 A U 162 1_555 -2.069 -1.345 -0.315 14.270 -15.500 -2.200 62 A_U123:U160_A A 123 ? A 160 ? 16 1 1 A A 126 1_555 A U 161 1_555 0.017 -0.166 -0.965 -18.245 -18.181 -0.597 63 A_A124:U159_A A 124 ? A 159 ? 20 1 1 A U 127 1_555 A C 160 1_555 4.284 -0.865 -0.334 -16.259 -11.472 -9.538 64 A_U125:C158_A A 125 ? A 158 ? ? ? 1 A U 128 1_555 A A 159 1_555 6.423 -4.090 0.962 -15.817 -0.242 -22.141 65 A_U126:A157_A A 126 ? A 157 ? ? 6 1 A A 129 1_555 A A 158 1_555 -5.375 5.676 0.136 -19.880 -3.695 -163.106 66 A_A127:A156_A A 127 ? A 156 ? 2 8 1 A U 131 1_555 A A 157 1_555 4.183 -1.787 -0.847 2.678 -29.654 -103.459 67 A_U129:A155_A A 129 ? A 155 ? 24 4 1 A A 132 1_555 A G 156 1_555 -6.740 -3.902 -0.134 -1.548 -8.556 -8.412 68 A_A130:G154_A A 130 ? A 154 ? 11 10 1 A G 133 1_555 A C 155 1_555 -0.189 0.029 -0.350 -6.187 -8.722 -6.132 69 A_G131:C153_A A 131 ? A 153 ? 19 1 1 A U 134 1_555 A G 154 1_555 1.999 -0.181 -0.173 0.289 -6.115 -6.538 70 A_U132:G152_A A 132 ? A 152 ? 28 1 1 A G 135 1_555 A A 153 1_555 6.715 -4.230 -0.297 4.044 -7.913 -9.736 71 A_G133:A151_A A 133 ? A 151 ? 11 10 1 A A 136 1_555 A U 152 1_555 -4.250 -1.724 -0.758 -5.304 -29.555 -105.829 72 A_A134:U150_A A 134 ? A 150 ? 24 4 1 A G 137 1_555 A G 150 1_555 -4.304 1.301 -0.055 -17.449 -12.517 -114.683 73 A_G135:G148_A A 135 ? A 148 ? 7 4 1 A A 138 1_555 A G 149 1_555 -6.972 -3.666 0.030 10.768 -5.660 -16.327 74 A_A136:G147_A A 136 ? A 147 ? 11 10 1 A G 139 1_555 A C 148 1_555 -0.100 -0.140 -0.569 -3.813 -9.896 -1.778 75 A_G137:C146_A A 137 ? A 146 ? 19 1 1 A G 140 1_555 A C 147 1_555 0.053 -0.028 -0.968 -15.772 2.773 -8.380 76 A_G138:C145_A A 138 ? A 145 ? 19 1 1 A G 141 1_555 A U 146 1_555 3.999 -0.134 -1.066 -11.298 21.987 -35.635 77 A_G139:U144_A A 139 ? A 144 ? ? 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A U 4 1_555 A A 205 1_555 A A 5 1_555 A U 204 1_555 -0.173 -1.870 3.756 -1.736 10.552 31.714 -5.104 -0.004 3.002 18.658 3.069 33.425 1 AA_U2A3:U202A203_AA A 2 ? A 203 ? A 3 ? A 202 ? 1 A A 5 1_555 A U 204 1_555 A A 6 1_555 A U 203 1_555 0.030 -1.926 3.552 6.327 8.983 33.318 -4.569 0.915 2.909 15.164 -10.679 35.034 2 AA_A3A4:U201U202_AA A 3 ? A 202 ? A 4 ? A 201 ? 1 A A 6 1_555 A U 203 1_555 A G 7 1_555 A C 202 1_555 0.107 -2.148 3.033 -3.702 11.284 29.442 -5.616 -0.748 2.062 21.150 6.940 31.698 3 AA_A4G5:C200U201_AA A 4 ? A 201 ? A 5 ? A 200 ? 1 A G 7 1_555 A C 202 1_555 A U 8 1_555 A A 201 1_555 -0.195 -1.680 3.572 0.598 8.783 35.405 -3.943 0.398 3.078 14.173 -0.966 36.449 4 AA_G5U6:A199C200_AA A 5 ? A 200 ? A 6 ? A 199 ? 1 A U 8 1_555 A A 201 1_555 A U 9 1_555 A A 200 1_555 -0.024 -1.622 3.371 1.254 6.469 31.528 -4.058 0.263 2.984 11.744 -2.277 32.192 5 AA_U6U7:A198A199_AA A 6 ? A 199 ? A 7 ? A 198 ? 1 A U 9 1_555 A A 200 1_555 A A 10 1_555 A U 199 1_555 -0.014 -1.709 3.436 -1.767 12.776 32.231 -4.748 -0.236 2.590 21.947 3.035 34.652 6 AA_U7A8:U197A198_AA A 7 ? A 198 ? A 8 ? A 197 ? 1 A A 10 1_555 A U 199 1_555 A G 11 1_555 A C 198 1_555 0.021 -1.563 3.291 0.045 8.533 31.299 -4.219 -0.030 2.779 15.459 -0.082 32.414 7 AA_A8G9:C196U197_AA A 8 ? A 197 ? A 9 ? A 196 ? 1 A G 11 1_555 A C 198 1_555 A U 14 1_555 A A 197 1_555 -1.502 -1.400 3.315 -0.286 5.515 50.697 -2.008 1.725 3.164 6.419 0.333 50.977 8 AA_G9U12:A195C196_AA A 9 ? A 196 ? A 12 ? A 195 ? 1 A U 14 1_555 A A 197 1_555 A U 15 1_555 A A 196 1_555 -0.378 -2.054 3.625 -2.118 8.195 29.756 -5.491 0.286 2.986 15.566 4.024 30.910 9 AA_U12U13:A194A195_AA A 12 ? A 195 ? A 13 ? A 194 ? 1 A U 15 1_555 A A 196 1_555 A G 16 1_555 A C 195 1_555 -0.683 -2.338 2.888 -1.127 4.419 23.075 -6.958 1.366 2.434 10.909 2.782 23.515 10 AA_U13G14:C193A194_AA A 13 ? A 194 ? A 14 ? A 193 ? 1 A U 17 1_555 A A 191 1_555 A G 18 1_555 A C 190 1_555 0.001 -1.920 3.730 -1.934 12.690 31.189 -5.450 -0.327 2.756 22.448 3.422 33.666 11 AA_U15G16:C188A189_AA A 15 ? A 189 ? A 16 ? A 188 ? 1 A G 18 1_555 A C 190 1_555 A G 19 1_555 A C 189 1_555 0.398 -2.196 3.379 3.376 7.131 27.375 -6.028 -0.069 2.759 14.685 -6.953 28.469 12 AA_G16G17:C187C188_AA A 16 ? A 188 ? A 17 ? A 187 ? 1 A G 19 1_555 A C 189 1_555 A U 20 1_555 A A 188 1_555 -0.365 -1.794 3.550 1.553 4.722 35.331 -3.645 0.832 3.272 7.732 -2.543 35.668 13 AA_G17U18:A186C187_AA A 17 ? A 187 ? A 18 ? A 186 ? 1 A U 20 1_555 A A 188 1_555 A U 21 1_555 A A 25 1_555 -2.521 -2.151 3.478 3.095 3.354 78.613 -1.791 2.076 3.314 2.645 -2.441 78.724 14 AA_U18U19:A23A186_AA A 18 ? A 186 ? A 19 ? A 23 ? 1 A U 21 1_555 A A 25 1_555 A G 22 1_555 A A 185 1_555 1.264 -0.402 3.121 2.276 8.628 -5.914 -11.475 10.375 1.782 -54.660 14.419 -10.702 15 AA_U19G20:A183A23_AA A 19 ? A 23 ? A 20 ? A 183 ? 1 A G 26 1_555 A U 52 1_555 A U 27 1_555 A A 51 1_555 -0.236 -1.503 3.783 1.820 10.859 41.264 -3.269 0.526 3.290 15.087 -2.529 42.646 16 AA_G24U25:A49U50_AA A 24 ? A 50 ? A 25 ? A 49 ? 1 A U 27 1_555 A A 51 1_555 A C 28 1_555 A G 50 1_555 -0.104 -1.599 3.580 -1.897 10.247 34.009 -4.160 -0.115 2.990 17.030 3.152 35.524 17 AA_U25C26:G48A49_AA A 25 ? A 49 ? A 26 ? A 48 ? 1 A C 28 1_555 A G 50 1_555 A G 29 1_555 A C 49 1_555 -1.755 -1.860 3.020 -3.029 6.541 29.004 -4.818 2.846 2.711 12.813 5.932 29.868 18 AA_C26G27:C47G48_AA A 26 ? A 48 ? A 27 ? A 47 ? 1 A G 29 1_555 A C 49 1_555 A A 30 1_555 A A 47 1_555 -2.236 3.032 5.265 18.788 10.625 22.852 2.462 9.712 3.553 21.608 -38.211 31.335 19 AA_G27A28:A45C47_AA A 27 ? A 47 ? A 28 ? A 45 ? 1 A A 30 1_555 A A 47 1_555 A G 32 1_555 A C 44 1_555 -2.443 2.802 1.833 -16.200 -151.846 76.166 1.672 1.217 -0.817 -81.024 8.644 158.596 20 AA_A28G30:C42A45_AA A 28 ? A 45 ? A 30 ? A 42 ? 1 A C 33 1_555 A G 43 1_555 A C 34 1_555 A G 42 1_555 0.379 -1.998 3.704 0.093 7.900 29.518 -5.450 -0.700 3.079 15.166 -0.178 30.534 21 AA_C31C32:G40G41_AA A 31 ? A 41 ? A 32 ? A 40 ? 1 A C 34 1_555 A G 42 1_555 A U 87 1_555 A A 41 1_555 -2.707 -1.320 3.490 3.741 5.338 45.735 -2.145 3.776 3.106 6.827 -4.785 46.173 22 AA_C32U85:A39G40_AA A 32 ? A 40 ? A 85 ? A 39 ? 1 A U 87 1_555 A A 41 1_555 A G 88 1_555 A C 40 1_555 -0.568 -1.860 3.743 -3.516 16.676 31.915 -5.424 0.407 2.540 27.975 5.898 36.075 23 AA_U85G86:C38A39_AA A 85 ? A 39 ? A 86 ? A 38 ? 1 A G 88 1_555 A C 40 1_555 A C 89 1_555 A G 39 1_555 -0.208 -1.454 3.359 0.535 10.220 30.115 -4.448 0.474 2.728 18.993 -0.994 31.768 24 AA_G86C87:G37C38_AA A 86 ? A 38 ? A 87 ? A 37 ? 1 A C 89 1_555 A G 39 1_555 A G 90 1_555 A C 38 1_555 0.359 -1.730 3.430 -0.933 14.115 30.794 -5.115 -0.759 2.417 24.994 1.652 33.816 25 AA_C87G88:C36G37_AA A 87 ? A 37 ? A 88 ? A 36 ? 1 A G 90 1_555 A C 38 1_555 A G 91 1_555 A U 37 1_555 -0.203 -1.898 3.362 -2.631 12.821 28.956 -5.627 -0.071 2.342 24.144 4.954 31.719 26 AA_G88G89:U35C36_AA A 88 ? A 36 ? A 89 ? A 35 ? 1 A G 91 1_555 A U 37 1_555 A C 92 1_555 A G 36 1_555 -0.422 -1.703 3.402 -6.073 7.820 41.958 -3.095 -0.027 3.081 10.742 8.342 43.059 27 AA_G89C90:G34U35_AA A 89 ? A 35 ? A 90 ? A 34 ? 1 A G 71 1_555 A C 67 1_555 A U 73 1_555 A A 66 1_555 -1.816 -1.487 4.626 13.486 0.853 45.497 -1.944 3.726 3.939 1.076 -16.999 47.359 28 AA_G69U71:A64C65_AA A 69 ? A 65 ? A 71 ? A 64 ? 1 A U 73 1_555 A A 66 1_555 A U 74 1_555 A A 65 1_555 0.367 -1.467 3.226 2.435 5.677 33.307 -3.391 -0.255 2.961 9.800 -4.202 33.859 29 AA_U71U72:A63A64_AA A 71 ? A 64 ? A 72 ? A 63 ? 1 A U 74 1_555 A A 65 1_555 A U 75 1_555 A A 64 1_555 0.329 -1.654 3.227 0.759 6.747 31.255 -4.146 -0.468 2.824 12.341 -1.387 31.966 30 AA_U72U73:A62A63_AA A 72 ? A 63 ? A 73 ? A 62 ? 1 A U 75 1_555 A A 64 1_555 A A 76 1_555 A U 63 1_555 0.040 -1.759 3.445 -0.126 14.110 33.089 -4.773 -0.082 2.511 23.490 0.210 35.895 31 AA_U73A74:U61A62_AA A 73 ? A 62 ? A 74 ? A 61 ? 1 A A 76 1_555 A U 63 1_555 A A 77 1_555 A U 62 1_555 0.123 -1.584 3.487 0.916 8.858 33.183 -4.081 -0.064 2.980 15.173 -1.570 34.325 32 AA_A74A75:U60U61_AA A 74 ? A 61 ? A 75 ? A 60 ? 1 A A 77 1_555 A U 62 1_555 A U 78 1_555 A G 61 1_555 0.761 -1.594 3.555 1.246 2.995 38.817 -2.780 -0.980 3.449 4.497 -1.871 38.947 33 AA_A75U76:G59U60_AA A 75 ? A 60 ? A 76 ? A 59 ? 1 A U 78 1_555 A G 61 1_555 A G 79 1_555 A A 60 1_555 -0.806 -1.185 3.861 3.893 5.604 54.904 -1.657 1.133 3.673 6.052 -4.204 55.293 34 AA_U76G77:A58G59_AA A 76 ? A 59 ? A 77 ? A 58 ? 1 A G 79 1_555 A A 60 1_555 A A 80 1_555 A U 58 1_555 -2.812 -1.155 5.974 -7.479 25.911 21.000 -9.439 2.646 3.459 50.696 14.634 34.061 35 AA_G77A78:U56A58_AA A 77 ? A 58 ? A 78 ? A 56 ? 1 A A 80 1_555 A U 58 1_555 A G 81 1_555 A G 57 1_555 -3.595 -2.498 0.780 12.751 166.251 137.624 -1.298 1.803 -0.266 83.569 -6.410 175.216 36 AA_A78G79:G55U56_AA A 78 ? A 56 ? A 79 ? A 55 ? 1 A G 81 1_555 A G 57 1_555 A G 176 1_555 A C 56 1_555 -3.612 1.754 -0.627 -138.555 -76.546 -85.859 -1.173 -1.303 -2.111 39.924 -72.265 -164.151 37 AA_G79G174:C54G55_AA A 79 ? A 55 ? A 174 ? A 54 ? 1 A G 176 1_555 A C 56 1_555 A U 177 1_555 A A 55 1_555 -0.344 -1.815 3.362 -0.987 4.753 32.866 -3.963 0.439 3.085 8.343 1.733 33.213 38 AA_G174U175:A53C54_AA A 174 ? A 54 ? A 175 ? A 53 ? 1 A U 177 1_555 A A 55 1_555 A G 178 1_555 A C 54 1_555 0.154 -1.783 3.563 0.345 16.733 31.248 -5.313 -0.205 2.339 28.637 -0.591 35.349 39 AA_U175G176:C52A53_AA A 175 ? A 53 ? A 176 ? A 52 ? 1 A G 178 1_555 A C 54 1_555 A G 179 1_555 A C 53 1_555 0.311 -2.048 3.681 2.894 13.159 32.199 -5.450 -0.074 2.682 22.534 -4.957 34.835 40 AA_G176G177:C51C52_AA A 176 ? A 52 ? A 177 ? A 51 ? 1 A G 179 1_555 A C 53 1_555 A G 180 1_555 A A 83 1_555 -2.847 -2.213 3.291 0.112 0.696 74.226 -1.856 2.363 3.270 0.577 -0.093 74.229 41 AA_G177G178:A81C51_AA A 177 ? A 51 ? A 178 ? A 81 ? 1 A G 180 1_555 A A 83 1_555 A G 181 1_555 A A 186 1_555 -0.137 -1.982 3.701 7.443 -0.446 19.884 -5.173 3.857 3.464 -1.237 -20.640 21.223 42 AA_G178G179:A184A81_AA A 178 ? A 81 ? A 179 ? A 184 ? 1 A G 181 1_555 A A 186 1_555 A A 184 1_555 A U 84 1_555 -4.168 1.284 3.314 23.538 2.950 -21.289 -3.196 -0.838 5.171 -6.053 48.290 -31.772 43 AA_G179A182:U82A184_AA A 179 ? A 184 ? A 182 ? A 82 ? 1 A A 184 1_555 A U 84 1_555 A C 183 1_555 A G 85 1_555 -0.935 -4.311 3.451 4.097 -10.514 -3.045 23.982 -3.498 -2.649 69.832 27.211 -11.686 44 AA_A182C181:G83U82_AA A 182 ? A 82 ? A 181 ? A 83 ? 1 A C 183 1_555 A G 85 1_555 A A 123 1_555 A G 172 1_555 -0.664 -1.122 2.964 0.409 7.473 68.422 -1.239 0.602 2.840 6.625 -0.362 68.780 45 AA_C181A121:G170G83_AA A 181 ? A 83 ? A 121 ? A 170 ? 1 A A 123 1_555 A G 172 1_555 A G 103 1_555 A C 171 1_555 0.394 -0.674 4.180 -6.150 17.416 71.150 -1.274 -0.580 3.911 14.723 5.199 73.201 46 AA_A121G101:C169G170_AA A 121 ? A 170 ? A 101 ? A 169 ? 1 A G 103 1_555 A C 171 1_555 A C 105 1_555 A G 170 1_555 0.701 -2.880 3.446 -7.676 -2.189 9.601 -10.440 -13.070 2.727 -10.921 38.289 12.480 47 AA_G101C103:G168C169_AA A 101 ? A 169 ? A 103 ? A 168 ? 1 A C 105 1_555 A G 170 1_555 A C 106 1_555 A G 169 1_555 -0.552 -2.052 3.843 -2.853 3.820 31.198 -4.586 0.407 3.608 7.050 5.267 31.551 48 AA_C103C104:G167G168_AA A 103 ? A 168 ? A 104 ? A 167 ? 1 A C 106 1_555 A G 169 1_555 A U 107 1_555 A A 168 1_555 -0.414 -1.804 3.465 0.269 9.164 30.927 -4.854 0.794 2.825 16.729 -0.491 32.225 49 AA_C104U105:A166G167_AA A 104 ? A 167 ? A 105 ? A 166 ? 1 A U 107 1_555 A A 168 1_555 A G 108 1_555 A C 167 1_555 -0.133 -1.711 3.427 -0.005 14.900 33.628 -4.644 0.211 2.474 24.326 0.009 36.694 50 AA_U105G106:C165A166_AA A 105 ? A 166 ? A 106 ? A 165 ? 1 A G 108 1_555 A C 167 1_555 A C 109 1_555 A G 166 1_555 0.370 -1.906 2.892 -0.157 3.867 24.167 -5.504 -0.914 2.558 9.161 0.371 24.470 51 AA_G106C107:G164C165_AA A 106 ? A 165 ? A 107 ? A 164 ? 1 A C 109 1_555 A G 166 1_555 A C 110 1_555 A G 120 1_555 1.925 -1.402 3.695 5.851 6.440 48.209 -2.247 -1.819 3.686 7.810 -7.096 48.942 52 AA_C107C108:G118G164_AA A 107 ? A 164 ? A 108 ? A 118 ? 1 A C 110 1_555 A G 120 1_555 A G 111 1_555 A C 119 1_555 -0.156 -1.793 3.381 -0.310 11.869 29.814 -5.247 0.231 2.504 22.002 0.575 32.041 53 AA_C108G109:C117G118_AA A 108 ? A 118 ? A 109 ? A 117 ? 1 A G 111 1_555 A C 119 1_555 A C 112 1_555 A G 118 1_555 0.178 -1.598 3.372 1.512 7.613 33.287 -3.900 -0.069 2.951 13.069 -2.595 34.155 54 AA_G109C110:G116C117_AA A 109 ? A 117 ? A 110 ? A 116 ? 1 A G 122 1_555 A C 164 1_555 A G 124 1_555 A C 163 1_555 0.956 -1.615 3.158 2.718 4.511 16.871 -7.752 -1.611 2.753 14.911 -8.982 17.668 55 AA_G120G122:C161C162_AA A 120 ? A 162 ? A 122 ? A 161 ? 1 A G 124 1_555 A C 163 1_555 A U 125 1_555 A U 162 1_555 -0.040 -2.246 3.283 -3.120 5.948 26.896 -6.030 -0.619 2.720 12.541 6.579 27.707 56 AA_G122U123:U160C161_AA A 122 ? A 161 ? A 123 ? A 160 ? 1 A U 125 1_555 A U 162 1_555 A A 126 1_555 A U 161 1_555 0.156 -1.590 4.495 1.388 17.185 45.201 -3.691 -0.050 3.697 21.459 -1.733 48.216 57 AA_U123A124:U159U160_AA A 123 ? A 160 ? A 124 ? A 159 ? 1 A A 126 1_555 A U 161 1_555 A U 127 1_555 A C 160 1_555 -1.064 -1.627 3.623 -3.136 7.215 43.848 -2.866 1.092 3.392 9.570 4.160 44.514 58 AA_A124U125:C158U159_AA A 124 ? A 159 ? A 125 ? A 158 ? 1 A U 127 1_555 A C 160 1_555 A U 128 1_555 A A 159 1_555 -0.638 -1.581 3.625 1.576 10.304 46.093 -2.864 0.932 3.199 12.965 -1.983 47.195 59 AA_U125U126:A157C158_AA A 125 ? A 158 ? A 126 ? A 157 ? 1 A U 128 1_555 A A 159 1_555 A A 129 1_555 A A 158 1_555 -3.572 -0.029 0.664 85.814 145.222 152.314 -0.060 1.813 0.206 72.752 -42.990 177.296 60 AA_U126A127:A156A157_AA A 126 ? A 157 ? A 127 ? A 156 ? 1 A A 129 1_555 A A 158 1_555 A U 131 1_555 A A 157 1_555 2.324 -2.430 0.581 125.409 125.397 -132.328 1.130 1.247 0.561 -62.779 62.784 -178.928 61 AA_A127U129:A155A156_AA A 127 ? A 156 ? A 129 ? A 155 ? 1 A U 131 1_555 A A 157 1_555 A A 132 1_555 A G 156 1_555 5.048 -1.072 3.648 2.395 2.915 -8.921 0.712 34.531 2.437 -17.734 14.573 -9.684 62 AA_U129A130:G154A155_AA A 129 ? A 155 ? A 130 ? A 154 ? 1 A A 132 1_555 A G 156 1_555 A G 133 1_555 A C 155 1_555 0.177 -0.973 3.861 -2.454 7.519 61.353 -1.354 -0.305 3.722 7.336 2.394 61.811 63 AA_A130G131:C153G154_AA A 130 ? A 154 ? A 131 ? A 153 ? 1 A G 133 1_555 A C 155 1_555 A U 134 1_555 A G 154 1_555 0.025 -1.477 3.455 -0.076 0.278 36.915 -2.373 -0.051 3.444 0.439 0.120 36.916 64 AA_G131U132:G152C153_AA A 131 ? A 153 ? A 132 ? A 152 ? 1 A U 134 1_555 A G 154 1_555 A G 135 1_555 A A 153 1_555 -0.335 -1.015 3.538 3.971 3.774 55.175 -1.327 0.608 3.438 4.063 -4.276 55.425 65 AA_U132G133:A151G152_AA A 132 ? A 152 ? A 133 ? A 151 ? 1 A G 135 1_555 A A 153 1_555 A A 136 1_555 A U 152 1_555 -5.015 -1.027 3.713 -4.606 2.938 -9.455 1.543 -32.402 1.382 -16.169 -25.347 -10.917 66 AA_G133A134:U150A151_AA A 133 ? A 151 ? A 134 ? A 150 ? 1 A A 136 1_555 A U 152 1_555 A G 137 1_555 A G 150 1_555 -1.495 -1.200 3.523 -4.791 -3.936 46.560 -1.144 1.436 3.735 -4.953 6.029 46.948 67 AA_A134G135:G148U150_AA A 134 ? A 150 ? A 135 ? A 148 ? 1 A G 137 1_555 A G 150 1_555 A A 138 1_555 A G 149 1_555 0.933 -0.182 3.191 -9.625 5.102 -13.771 -2.732 -3.215 3.071 -18.031 -34.015 -17.543 68 AA_G135A136:G147G148_AA A 135 ? A 148 ? A 136 ? A 147 ? 1 A A 138 1_555 A G 149 1_555 A G 139 1_555 A C 148 1_555 1.192 -1.262 4.062 -2.633 12.650 62.932 -1.844 -1.259 3.727 11.983 2.494 64.111 69 AA_A136G137:C146G147_AA A 136 ? A 147 ? A 137 ? A 146 ? 1 A G 139 1_555 A C 148 1_555 A G 140 1_555 A C 147 1_555 -0.422 -2.245 3.982 0.702 8.080 32.753 -5.362 0.857 3.340 14.062 -1.222 33.716 70 AA_G137G138:C145C146_AA A 137 ? A 146 ? A 138 ? A 145 ? 1 A G 140 1_555 A C 147 1_555 A G 141 1_555 A U 146 1_555 -1.866 -2.114 3.789 5.394 10.662 40.458 -4.093 3.179 2.904 15.025 -7.602 42.115 71 AA_G138G139:U144C145_AA A 138 ? A 145 ? A 139 ? A 144 ? # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)' 'United States' 'R35 GM122579' 1 'Howard Hughes Medical Institute (HHMI)' 'United States' ? 2 'National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)' 'United States' 'U24 GM129541' 3 'National Science Foundation (NSF, United States)' 'United States' 2330652 4 # _atom_sites.entry_id 9ELY _atom_sites.Cartn_transf_matrix[1][1] ? _atom_sites.Cartn_transf_matrix[1][2] ? _atom_sites.Cartn_transf_matrix[1][3] ? _atom_sites.Cartn_transf_matrix[2][1] ? _atom_sites.Cartn_transf_matrix[2][2] ? _atom_sites.Cartn_transf_matrix[2][3] ? _atom_sites.Cartn_transf_matrix[3][1] ? _atom_sites.Cartn_transf_matrix[3][2] ? _atom_sites.Cartn_transf_matrix[3][3] ? _atom_sites.Cartn_transf_vector[1] ? _atom_sites.Cartn_transf_vector[2] ? _atom_sites.Cartn_transf_vector[3] ? _atom_sites.Cartn_transform_axes ? _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 _atom_sites.solution_primary ? _atom_sites.solution_secondary ? _atom_sites.solution_hydrogens ? _atom_sites.special_details ? # loop_ _atom_type.symbol C N O P # loop_ #