HEADER FLAVOPROTEIN 07-MAR-24 9EM0 TITLE OPR3 WILD TYPE IN ITS DIMERIC FORM WITH SPECIAL L6 CONFORMATION COMPND MOL_ID: 1; COMPND 2 MOLECULE: 12-OXOPHYTODIENOATE REDUCTASE 3; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: 12-OXOPHYTODIENOATE-10,11-REDUCTASE 3,OPDA-REDUCTASE 3, COMPND 5 LEOPR3; COMPND 6 EC: 1.3.1.42; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SOLANUM LYCOCARPUM; SOURCE 3 ORGANISM_TAXID: 329783; SOURCE 4 GENE: OPR3; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS ENE-REDUCTASE, OLD YELLOW ENZYME, FLAVOPROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR A.BIJELIC,P.MACHEROUX,B.KERSCHBAUMER REVDAT 2 21-AUG-24 9EM0 1 JRNL REVDAT 1 14-AUG-24 9EM0 0 JRNL AUTH B.KERSCHBAUMER,P.MACHEROUX,A.BIJELIC JRNL TITL ANALYSIS OF HOMODIMER FORMATION IN 12-OXOPHYTODIENOATE JRNL TITL 2 REDUCTASE 3 IN SOLUTIO AND CRYSTALLO CHALLENGES THE JRNL TITL 3 PHYSIOLOGICAL ROLE OF THE DIMER. JRNL REF SCI REP V. 14 18093 2024 JRNL REFN ESSN 2045-2322 JRNL PMID 39103552 JRNL DOI 10.1038/S41598-024-69160-6 REMARK 2 REMARK 2 RESOLUTION. 2.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.21_5207 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : GEOSTD + MONOMER LIBRARY + CDL V1.2 REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 47.46 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 40255 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.250 REMARK 3 R VALUE (WORKING SET) : 0.249 REMARK 3 FREE R VALUE : 0.277 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 2.050 REMARK 3 FREE R VALUE TEST SET COUNT : 825 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 47.4600 - 4.0000 1.00 6647 139 0.2037 0.2278 REMARK 3 2 4.0000 - 3.1700 1.00 6582 137 0.2257 0.2447 REMARK 3 3 3.1700 - 2.7700 1.00 6534 137 0.2767 0.3329 REMARK 3 4 2.7700 - 2.5200 1.00 6553 137 0.2917 0.3052 REMARK 3 5 2.5200 - 2.3400 1.00 6552 138 0.3121 0.3505 REMARK 3 6 2.3400 - 2.2000 1.00 6562 137 0.3157 0.3386 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.359 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 31.375 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 29.22 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 41.90 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.002 5890 REMARK 3 ANGLE : 0.460 8029 REMARK 3 CHIRALITY : 0.040 886 REMARK 3 PLANARITY : 0.004 1044 REMARK 3 DIHEDRAL : 14.548 2086 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 7 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 10 THROUGH 71 ) REMARK 3 ORIGIN FOR THE GROUP (A): 10.9703 -2.6416 28.0204 REMARK 3 T TENSOR REMARK 3 T11: 0.2110 T22: 0.1560 REMARK 3 T33: 0.1330 T12: -0.0050 REMARK 3 T13: 0.0655 T23: -0.0030 REMARK 3 L TENSOR REMARK 3 L11: 1.0088 L22: 1.4872 REMARK 3 L33: 0.4080 L12: -0.5287 REMARK 3 L13: -0.6360 L23: 0.4044 REMARK 3 S TENSOR REMARK 3 S11: 0.0978 S12: 0.2121 S13: -0.0381 REMARK 3 S21: -0.2932 S22: -0.1056 S23: 0.2352 REMARK 3 S31: -0.0440 S32: -0.0479 S33: -0.0486 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 72 THROUGH 196 ) REMARK 3 ORIGIN FOR THE GROUP (A): 25.4556 -4.9370 35.3943 REMARK 3 T TENSOR REMARK 3 T11: 0.3941 T22: 0.0621 REMARK 3 T33: 0.0790 T12: 0.0322 REMARK 3 T13: 0.1458 T23: -0.0188 REMARK 3 L TENSOR REMARK 3 L11: 0.4173 L22: 0.2637 REMARK 3 L33: 0.3767 L12: -0.1485 REMARK 3 L13: -0.1654 L23: 0.0146 REMARK 3 S TENSOR REMARK 3 S11: -0.0479 S12: 0.1933 S13: 0.0437 REMARK 3 S21: -0.1272 S22: -0.0685 S23: -0.2026 REMARK 3 S31: 0.0040 S32: -0.0182 S33: -2.9173 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 197 THROUGH 270 ) REMARK 3 ORIGIN FOR THE GROUP (A): 27.8001 11.7138 35.8759 REMARK 3 T TENSOR REMARK 3 T11: 0.4094 T22: 0.1388 REMARK 3 T33: 0.2224 T12: -0.0053 REMARK 3 T13: 0.1111 T23: 0.0038 REMARK 3 L TENSOR REMARK 3 L11: 1.2066 L22: 0.4589 REMARK 3 L33: 0.4846 L12: -0.5070 REMARK 3 L13: 0.1541 L23: 0.2708 REMARK 3 S TENSOR REMARK 3 S11: -0.0660 S12: 0.0308 S13: 0.2027 REMARK 3 S21: 0.0064 S22: 0.0300 S23: -0.2641 REMARK 3 S31: -0.0303 S32: 0.0701 S33: -0.1452 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 271 THROUGH 332 ) REMARK 3 ORIGIN FOR THE GROUP (A): 10.1230 13.2383 39.4756 REMARK 3 T TENSOR REMARK 3 T11: 0.4094 T22: 0.1752 REMARK 3 T33: 0.2051 T12: 0.0074 REMARK 3 T13: 0.1064 T23: -0.0024 REMARK 3 L TENSOR REMARK 3 L11: 1.3795 L22: 0.3895 REMARK 3 L33: 0.5892 L12: 0.0436 REMARK 3 L13: 0.2290 L23: -0.2701 REMARK 3 S TENSOR REMARK 3 S11: -0.0888 S12: -0.2126 S13: 0.0101 REMARK 3 S21: 0.2906 S22: -0.0621 S23: 0.0334 REMARK 3 S31: -0.0439 S32: -0.0216 S33: 0.0625 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 333 THROUGH 385 ) REMARK 3 ORIGIN FOR THE GROUP (A): 1.8201 -3.7631 35.8374 REMARK 3 T TENSOR REMARK 3 T11: 0.0843 T22: 0.1516 REMARK 3 T33: 0.3010 T12: -0.0227 REMARK 3 T13: 0.0401 T23: 0.0271 REMARK 3 L TENSOR REMARK 3 L11: 0.1341 L22: 0.3103 REMARK 3 L33: 0.0469 L12: 0.1687 REMARK 3 L13: 0.0333 L23: 0.1033 REMARK 3 S TENSOR REMARK 3 S11: -0.0447 S12: 0.0436 S13: 0.0718 REMARK 3 S21: -0.0119 S22: 0.0042 S23: 0.3263 REMARK 3 S31: -0.0494 S32: 0.0006 S33: -0.4279 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 10 THROUGH 229 ) REMARK 3 ORIGIN FOR THE GROUP (A): 7.2035 10.9252 75.0154 REMARK 3 T TENSOR REMARK 3 T11: 1.0214 T22: 0.3188 REMARK 3 T33: 0.3148 T12: 0.0011 REMARK 3 T13: 0.2635 T23: 0.0312 REMARK 3 L TENSOR REMARK 3 L11: 0.6909 L22: 0.1419 REMARK 3 L33: 1.9821 L12: -0.0060 REMARK 3 L13: -0.1952 L23: -0.4130 REMARK 3 S TENSOR REMARK 3 S11: -0.0167 S12: 0.0747 S13: -0.0220 REMARK 3 S21: -0.0366 S22: -0.0133 S23: 0.0173 REMARK 3 S31: -0.0645 S32: 0.0288 S33: 0.0928 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 230 THROUGH 384 ) REMARK 3 ORIGIN FOR THE GROUP (A): 5.8113 -2.9321 68.5736 REMARK 3 T TENSOR REMARK 3 T11: 0.9898 T22: 0.3741 REMARK 3 T33: 0.2884 T12: 0.0177 REMARK 3 T13: 0.2731 T23: 0.0040 REMARK 3 L TENSOR REMARK 3 L11: 0.4756 L22: 0.0077 REMARK 3 L33: 0.8789 L12: -0.0610 REMARK 3 L13: -0.2530 L23: 0.0051 REMARK 3 S TENSOR REMARK 3 S11: -0.0407 S12: 0.2580 S13: -0.1322 REMARK 3 S21: -0.0283 S22: -0.0480 S23: 0.0967 REMARK 3 S31: 0.5180 S32: -0.0308 S33: -0.2989 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 9EM0 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 08-MAR-24. REMARK 100 THE DEPOSITION ID IS D_1292137133. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 08-FEB-24 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID30B REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.8731 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER2 X 9M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 102435 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.990 REMARK 200 RESOLUTION RANGE LOW (A) : 47.460 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.2 REMARK 200 DATA REDUNDANCY : 3.400 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 2.4700 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.99 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.09 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.66 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.26 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M MES/TRIS (6.5), 50 MM AMMONIUM REMARK 280 SULFATE, 16% PEG8000, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE REMARK 280 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 44.82950 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5210 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 26080 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -18.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 HIS A -5 REMARK 465 HIS A -4 REMARK 465 HIS A -3 REMARK 465 HIS A -2 REMARK 465 HIS A -1 REMARK 465 HIS A 0 REMARK 465 MET A 1 REMARK 465 ALA A 2 REMARK 465 SER A 3 REMARK 465 SER A 4 REMARK 465 ALA A 5 REMARK 465 GLN A 6 REMARK 465 ASP A 7 REMARK 465 GLY A 8 REMARK 465 ASN A 9 REMARK 465 GLY A 386 REMARK 465 ASN A 387 REMARK 465 GLY A 388 REMARK 465 SER A 389 REMARK 465 ASN A 390 REMARK 465 GLY A 391 REMARK 465 PRO A 392 REMARK 465 LEU A 393 REMARK 465 SER A 394 REMARK 465 ARG A 395 REMARK 465 LEU A 396 REMARK 465 HIS B -5 REMARK 465 HIS B -4 REMARK 465 HIS B -3 REMARK 465 HIS B -2 REMARK 465 HIS B -1 REMARK 465 HIS B 0 REMARK 465 MET B 1 REMARK 465 ALA B 2 REMARK 465 SER B 3 REMARK 465 SER B 4 REMARK 465 ALA B 5 REMARK 465 GLN B 6 REMARK 465 ASP B 7 REMARK 465 GLY B 8 REMARK 465 ASN B 9 REMARK 465 GLY B 293 REMARK 465 ARG B 294 REMARK 465 GLN B 385 REMARK 465 GLY B 386 REMARK 465 ASN B 387 REMARK 465 GLY B 388 REMARK 465 SER B 389 REMARK 465 ASN B 390 REMARK 465 GLY B 391 REMARK 465 PRO B 392 REMARK 465 LEU B 393 REMARK 465 SER B 394 REMARK 465 ARG B 395 REMARK 465 LEU B 396 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 116 CG CD OE1 OE2 REMARK 470 ARG A 136 CG CD NE CZ NH1 NH2 REMARK 470 THR A 290 OG1 CG2 REMARK 470 ARG A 294 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 325 CG CD OE1 OE2 REMARK 470 LYS A 356 CG CD CE NZ REMARK 470 LYS A 363 CG CD CE NZ REMARK 470 LYS A 367 CG CD CE NZ REMARK 470 GLN A 385 CG CD OE1 NE2 REMARK 470 LEU B 12 CG CD1 CD2 REMARK 470 LYS B 17 CG CD CE NZ REMARK 470 LYS B 20 CG CD CE NZ REMARK 470 GLU B 48 CG CD OE1 OE2 REMARK 470 LYS B 83 CG CD CE NZ REMARK 470 LYS B 99 CG CD CE NZ REMARK 470 LYS B 131 CG CD CE NZ REMARK 470 ARG B 136 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 151 CG CD CE NZ REMARK 470 ARG B 169 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 206 CG CD OE1 OE2 REMARK 470 LYS B 216 CG CD CE NZ REMARK 470 MET B 248 CG SD CE REMARK 470 ARG B 262 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 265 CG CD CE NZ REMARK 470 HIS B 269 CG ND1 CD2 CE1 NE2 REMARK 470 LEU B 295 CG CD1 CD2 REMARK 470 GLU B 298 CG CD OE1 OE2 REMARK 470 GLU B 299 CG CD OE1 OE2 REMARK 470 GLU B 300 CG CD OE1 OE2 REMARK 470 ARG B 303 CG CD NE CZ NH1 NH2 REMARK 470 ARG B 306 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 325 CG CD OE1 OE2 REMARK 470 GLU B 329 CG CD OE1 OE2 REMARK 470 ILE B 355 CG1 CG2 CD1 REMARK 470 LYS B 356 CG CD CE NZ REMARK 470 LEU B 357 CG CD1 CD2 REMARK 470 ASN B 362 CG OD1 ND2 REMARK 470 LYS B 363 CG CD CE NZ REMARK 470 ASN B 365 CG OD1 ND2 REMARK 470 LYS B 367 CG CD CE NZ REMARK 470 LEU B 384 CG CD1 CD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O1P FMN A 401 O HOH A 501 2.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 243 34.74 -99.38 REMARK 500 ASP A 350 52.71 -95.98 REMARK 500 VAL A 375 -51.21 -120.14 REMARK 500 TYR B 190 -168.82 -102.92 REMARK 500 SER B 239 79.03 -154.80 REMARK 500 ASN B 251 84.51 -150.74 REMARK 500 THR B 371 163.83 81.38 REMARK 500 VAL B 375 -63.40 -109.06 REMARK 500 REMARK 500 REMARK: NULL DBREF 9EM0 A 1 396 UNP Q9FEW9 OPR3_SOLLC 1 396 DBREF 9EM0 B 1 396 UNP Q9FEW9 OPR3_SOLLC 1 396 SEQADV 9EM0 HIS A -5 UNP Q9FEW9 EXPRESSION TAG SEQADV 9EM0 HIS A -4 UNP Q9FEW9 EXPRESSION TAG SEQADV 9EM0 HIS A -3 UNP Q9FEW9 EXPRESSION TAG SEQADV 9EM0 HIS A -2 UNP Q9FEW9 EXPRESSION TAG SEQADV 9EM0 HIS A -1 UNP Q9FEW9 EXPRESSION TAG SEQADV 9EM0 HIS A 0 UNP Q9FEW9 EXPRESSION TAG SEQADV 9EM0 HIS B -5 UNP Q9FEW9 EXPRESSION TAG SEQADV 9EM0 HIS B -4 UNP Q9FEW9 EXPRESSION TAG SEQADV 9EM0 HIS B -3 UNP Q9FEW9 EXPRESSION TAG SEQADV 9EM0 HIS B -2 UNP Q9FEW9 EXPRESSION TAG SEQADV 9EM0 HIS B -1 UNP Q9FEW9 EXPRESSION TAG SEQADV 9EM0 HIS B 0 UNP Q9FEW9 EXPRESSION TAG SEQRES 1 A 402 HIS HIS HIS HIS HIS HIS MET ALA SER SER ALA GLN ASP SEQRES 2 A 402 GLY ASN ASN PRO LEU PHE SER PRO TYR LYS MET GLY LYS SEQRES 3 A 402 PHE ASN LEU SER HIS ARG VAL VAL LEU ALA PRO MET THR SEQRES 4 A 402 ARG CYS ARG ALA LEU ASN ASN ILE PRO GLN ALA ALA LEU SEQRES 5 A 402 GLY GLU TYR TYR GLU GLN ARG ALA THR ALA GLY GLY PHE SEQRES 6 A 402 LEU ILE THR GLU GLY THR MET ILE SER PRO THR SER ALA SEQRES 7 A 402 GLY PHE PRO HIS VAL PRO GLY ILE PHE THR LYS GLU GLN SEQRES 8 A 402 VAL ARG GLU TRP LYS LYS ILE VAL ASP VAL VAL HIS ALA SEQRES 9 A 402 LYS GLY ALA VAL ILE PHE CYS GLN LEU TRP HIS VAL GLY SEQRES 10 A 402 ARG ALA SER HIS GLU VAL TYR GLN PRO ALA GLY ALA ALA SEQRES 11 A 402 PRO ILE SER SER THR GLU LYS PRO ILE SER ASN ARG TRP SEQRES 12 A 402 ARG ILE LEU MET PRO ASP GLY THR HIS GLY ILE TYR PRO SEQRES 13 A 402 LYS PRO ARG ALA ILE GLY THR TYR GLU ILE SER GLN VAL SEQRES 14 A 402 VAL GLU ASP TYR ARG ARG SER ALA LEU ASN ALA ILE GLU SEQRES 15 A 402 ALA GLY PHE ASP GLY ILE GLU ILE HIS GLY ALA HIS GLY SEQRES 16 A 402 TYR LEU ILE ASP GLN PHE LEU LYS ASP GLY ILE ASN ASP SEQRES 17 A 402 ARG THR ASP GLU TYR GLY GLY SER LEU ALA ASN ARG CYS SEQRES 18 A 402 LYS PHE ILE THR GLN VAL VAL GLN ALA VAL VAL SER ALA SEQRES 19 A 402 ILE GLY ALA ASP ARG VAL GLY VAL ARG VAL SER PRO ALA SEQRES 20 A 402 ILE ASP HIS LEU ASP ALA MET ASP SER ASN PRO LEU SER SEQRES 21 A 402 LEU GLY LEU ALA VAL VAL GLU ARG LEU ASN LYS ILE GLN SEQRES 22 A 402 LEU HIS SER GLY SER LYS LEU ALA TYR LEU HIS VAL THR SEQRES 23 A 402 GLN PRO ARG TYR VAL ALA TYR GLY GLN THR GLU ALA GLY SEQRES 24 A 402 ARG LEU GLY SER GLU GLU GLU GLU ALA ARG LEU MET ARG SEQRES 25 A 402 THR LEU ARG ASN ALA TYR GLN GLY THR PHE ILE CYS SER SEQRES 26 A 402 GLY GLY TYR THR ARG GLU LEU GLY ILE GLU ALA VAL ALA SEQRES 27 A 402 GLN GLY ASP ALA ASP LEU VAL SER TYR GLY ARG LEU PHE SEQRES 28 A 402 ILE SER ASN PRO ASP LEU VAL MET ARG ILE LYS LEU ASN SEQRES 29 A 402 ALA PRO LEU ASN LYS TYR ASN ARG LYS THR PHE TYR THR SEQRES 30 A 402 GLN ASP PRO VAL VAL GLY TYR THR ASP TYR PRO PHE LEU SEQRES 31 A 402 GLN GLY ASN GLY SER ASN GLY PRO LEU SER ARG LEU SEQRES 1 B 402 HIS HIS HIS HIS HIS HIS MET ALA SER SER ALA GLN ASP SEQRES 2 B 402 GLY ASN ASN PRO LEU PHE SER PRO TYR LYS MET GLY LYS SEQRES 3 B 402 PHE ASN LEU SER HIS ARG VAL VAL LEU ALA PRO MET THR SEQRES 4 B 402 ARG CYS ARG ALA LEU ASN ASN ILE PRO GLN ALA ALA LEU SEQRES 5 B 402 GLY GLU TYR TYR GLU GLN ARG ALA THR ALA GLY GLY PHE SEQRES 6 B 402 LEU ILE THR GLU GLY THR MET ILE SER PRO THR SER ALA SEQRES 7 B 402 GLY PHE PRO HIS VAL PRO GLY ILE PHE THR LYS GLU GLN SEQRES 8 B 402 VAL ARG GLU TRP LYS LYS ILE VAL ASP VAL VAL HIS ALA SEQRES 9 B 402 LYS GLY ALA VAL ILE PHE CYS GLN LEU TRP HIS VAL GLY SEQRES 10 B 402 ARG ALA SER HIS GLU VAL TYR GLN PRO ALA GLY ALA ALA SEQRES 11 B 402 PRO ILE SER SER THR GLU LYS PRO ILE SER ASN ARG TRP SEQRES 12 B 402 ARG ILE LEU MET PRO ASP GLY THR HIS GLY ILE TYR PRO SEQRES 13 B 402 LYS PRO ARG ALA ILE GLY THR TYR GLU ILE SER GLN VAL SEQRES 14 B 402 VAL GLU ASP TYR ARG ARG SER ALA LEU ASN ALA ILE GLU SEQRES 15 B 402 ALA GLY PHE ASP GLY ILE GLU ILE HIS GLY ALA HIS GLY SEQRES 16 B 402 TYR LEU ILE ASP GLN PHE LEU LYS ASP GLY ILE ASN ASP SEQRES 17 B 402 ARG THR ASP GLU TYR GLY GLY SER LEU ALA ASN ARG CYS SEQRES 18 B 402 LYS PHE ILE THR GLN VAL VAL GLN ALA VAL VAL SER ALA SEQRES 19 B 402 ILE GLY ALA ASP ARG VAL GLY VAL ARG VAL SER PRO ALA SEQRES 20 B 402 ILE ASP HIS LEU ASP ALA MET ASP SER ASN PRO LEU SER SEQRES 21 B 402 LEU GLY LEU ALA VAL VAL GLU ARG LEU ASN LYS ILE GLN SEQRES 22 B 402 LEU HIS SER GLY SER LYS LEU ALA TYR LEU HIS VAL THR SEQRES 23 B 402 GLN PRO ARG TYR VAL ALA TYR GLY GLN THR GLU ALA GLY SEQRES 24 B 402 ARG LEU GLY SER GLU GLU GLU GLU ALA ARG LEU MET ARG SEQRES 25 B 402 THR LEU ARG ASN ALA TYR GLN GLY THR PHE ILE CYS SER SEQRES 26 B 402 GLY GLY TYR THR ARG GLU LEU GLY ILE GLU ALA VAL ALA SEQRES 27 B 402 GLN GLY ASP ALA ASP LEU VAL SER TYR GLY ARG LEU PHE SEQRES 28 B 402 ILE SER ASN PRO ASP LEU VAL MET ARG ILE LYS LEU ASN SEQRES 29 B 402 ALA PRO LEU ASN LYS TYR ASN ARG LYS THR PHE TYR THR SEQRES 30 B 402 GLN ASP PRO VAL VAL GLY TYR THR ASP TYR PRO PHE LEU SEQRES 31 B 402 GLN GLY ASN GLY SER ASN GLY PRO LEU SER ARG LEU HET FMN A 401 31 HET 1PE A 402 16 HET FMN B 401 31 HETNAM FMN FLAVIN MONONUCLEOTIDE HETNAM 1PE PENTAETHYLENE GLYCOL HETSYN FMN RIBOFLAVIN MONOPHOSPHATE HETSYN 1PE PEG400 FORMUL 3 FMN 2(C17 H21 N4 O9 P) FORMUL 4 1PE C10 H22 O6 FORMUL 6 HOH *61(H2 O) HELIX 1 AA1 ASN A 10 SER A 14 5 5 HELIX 2 AA2 ALA A 37 ILE A 41 5 5 HELIX 3 AA3 GLN A 43 GLN A 52 1 10 HELIX 4 AA4 SER A 68 ALA A 72 5 5 HELIX 5 AA5 THR A 82 ALA A 98 1 17 HELIX 6 AA6 HIS A 115 ALA A 123 5 9 HELIX 7 AA7 GLY A 156 ALA A 177 1 22 HELIX 8 AA8 TYR A 190 LYS A 197 1 8 HELIX 9 AA9 SER A 210 CYS A 215 1 6 HELIX 10 AB1 CYS A 215 GLY A 230 1 16 HELIX 11 AB2 ASN A 251 GLY A 271 1 21 HELIX 12 AB3 SER A 297 TYR A 312 1 16 HELIX 13 AB4 THR A 323 GLN A 333 1 11 HELIX 14 AB5 GLY A 342 ASN A 348 1 7 HELIX 15 AB6 ASP A 350 ASN A 358 1 9 HELIX 16 AB7 ASN A 365 PHE A 369 5 5 HELIX 17 AB8 ASN B 10 SER B 14 5 5 HELIX 18 AB9 ALA B 37 ILE B 41 5 5 HELIX 19 AC1 GLN B 43 ALA B 54 1 12 HELIX 20 AC2 THR B 82 ALA B 98 1 17 HELIX 21 AC3 HIS B 115 ALA B 123 5 9 HELIX 22 AC4 GLY B 156 ALA B 177 1 22 HELIX 23 AC5 TYR B 190 LYS B 197 1 8 HELIX 24 AC6 SER B 210 CYS B 215 1 6 HELIX 25 AC7 CYS B 215 GLY B 230 1 16 HELIX 26 AC8 ASN B 251 GLY B 271 1 21 HELIX 27 AC9 SER B 297 TYR B 312 1 16 HELIX 28 AD1 THR B 323 GLN B 333 1 11 HELIX 29 AD2 GLY B 342 ASN B 348 1 7 HELIX 30 AD3 ASP B 350 ASN B 358 1 9 HELIX 31 AD4 ASN B 365 PHE B 369 5 5 SHEET 1 AA1 2 TYR A 16 MET A 18 0 SHEET 2 AA1 2 PHE A 21 LEU A 23 -1 O LEU A 23 N TYR A 16 SHEET 1 AA210 THR A 65 MET A 66 0 SHEET 2 AA210 VAL A 102 TRP A 108 1 O TRP A 108 N THR A 65 SHEET 3 AA210 GLY A 181 GLY A 186 1 O GLU A 183 N LEU A 107 SHEET 4 AA210 VAL A 234 VAL A 238 1 O GLY A 235 N ILE A 184 SHEET 5 AA210 TYR A 276 THR A 280 1 O HIS A 278 N VAL A 236 SHEET 6 AA210 PHE A 316 SER A 319 1 O ILE A 317 N LEU A 277 SHEET 7 AA210 LEU A 338 TYR A 341 1 O LEU A 338 N CYS A 318 SHEET 8 AA210 VAL A 27 LEU A 29 1 N VAL A 28 O TYR A 341 SHEET 9 AA210 PHE A 59 ILE A 61 1 O PHE A 59 N LEU A 29 SHEET 10 AA210 VAL A 102 TRP A 108 1 O VAL A 102 N LEU A 60 SHEET 1 AA3 2 ILE A 126 SER A 127 0 SHEET 2 AA3 2 ARG A 153 ALA A 154 1 O ARG A 153 N SER A 127 SHEET 1 AA4 2 ILE A 139 LEU A 140 0 SHEET 2 AA4 2 HIS A 146 GLY A 147 -1 O GLY A 147 N ILE A 139 SHEET 1 AA5 2 TYR B 16 MET B 18 0 SHEET 2 AA5 2 PHE B 21 LEU B 23 -1 O LEU B 23 N TYR B 16 SHEET 1 AA610 THR B 65 MET B 66 0 SHEET 2 AA610 VAL B 102 TRP B 108 1 O TRP B 108 N THR B 65 SHEET 3 AA610 GLY B 181 GLY B 186 1 O GLU B 183 N LEU B 107 SHEET 4 AA610 VAL B 234 VAL B 238 1 O GLY B 235 N ILE B 184 SHEET 5 AA610 TYR B 276 THR B 280 1 O HIS B 278 N VAL B 236 SHEET 6 AA610 PHE B 316 SER B 319 1 O ILE B 317 N LEU B 277 SHEET 7 AA610 LEU B 338 TYR B 341 1 O LEU B 338 N CYS B 318 SHEET 8 AA610 VAL B 27 LEU B 29 1 N VAL B 28 O TYR B 341 SHEET 9 AA610 PHE B 59 ILE B 61 1 O PHE B 59 N LEU B 29 SHEET 10 AA610 VAL B 102 TRP B 108 1 O VAL B 102 N LEU B 60 SHEET 1 AA7 2 ILE B 126 SER B 127 0 SHEET 2 AA7 2 ARG B 153 ALA B 154 1 O ARG B 153 N SER B 127 SHEET 1 AA8 2 ILE B 139 LEU B 140 0 SHEET 2 AA8 2 HIS B 146 GLY B 147 -1 O GLY B 147 N ILE B 139 CRYST1 57.695 89.659 80.148 90.00 104.17 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017333 0.000000 0.004376 0.00000 SCALE2 0.000000 0.011153 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012869 0.00000